View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2557_low_13 (Length: 434)

Name: NF2557_low_13
Description: NF2557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2557_low_13
NF2557_low_13
[»] chr2 (22 HSPs)
chr2 (18-424)||(34814535-34814954)
chr2 (19-158)||(41867890-41868043)
chr2 (90-158)||(27502419-27502487)
chr2 (85-158)||(5532471-5532544)
chr2 (272-414)||(34815528-34815670)
chr2 (85-158)||(4413048-4413121)
chr2 (85-158)||(23484920-23484993)
chr2 (86-141)||(2888569-2888624)
chr2 (19-70)||(32029170-32029221)
chr2 (85-141)||(3968408-3968464)
chr2 (85-141)||(9685414-9685470)
chr2 (19-70)||(13413323-13413374)
chr2 (85-156)||(17344690-17344761)
chr2 (19-73)||(17344610-17344664)
chr2 (85-158)||(19161765-19161838)
chr2 (85-158)||(28225052-28225125)
chr2 (19-63)||(16351935-16351979)
chr2 (19-63)||(20142816-20142860)
chr2 (84-158)||(1296032-1296106)
chr2 (38-67)||(11921297-11921326)
chr2 (104-141)||(13147096-13147133)
chr2 (85-138)||(18744956-18745009)
[»] chr1 (19 HSPs)
chr1 (83-141)||(2764529-2764587)
chr1 (85-158)||(19035499-19035572)
chr1 (85-158)||(45659630-45659703)
chr1 (85-148)||(29169785-29169848)
chr1 (85-158)||(20259779-20259852)
chr1 (85-158)||(31737305-31737378)
chr1 (85-158)||(34644618-34644691)
chr1 (85-149)||(21473055-21473119)
chr1 (85-141)||(50314623-50314679)
chr1 (19-73)||(21472975-21473029)
chr1 (85-159)||(37200034-37200108)
chr1 (84-158)||(50161399-50161473)
chr1 (19-63)||(4862080-4862124)
chr1 (85-149)||(28041118-28041182)
chr1 (19-70)||(24177595-24177646)
chr1 (19-73)||(28041208-28041262)
chr1 (85-158)||(4861971-4862044)
chr1 (21-73)||(2898676-2898728)
chr1 (91-147)||(36486944-36487000)
[»] chr4 (22 HSPs)
chr4 (85-158)||(53619638-53619711)
chr4 (86-158)||(30940721-30940793)
chr4 (18-73)||(34107777-34107832)
chr4 (93-158)||(50000907-50000972)
chr4 (85-158)||(132437-132510)
chr4 (85-141)||(23255756-23255812)
chr4 (19-73)||(53170485-53170539)
chr4 (85-158)||(12053465-12053538)
chr4 (85-158)||(12918354-12918427)
chr4 (85-158)||(31847139-31847212)
chr4 (85-158)||(45386043-45386116)
chr4 (85-158)||(55933444-55933517)
chr4 (85-158)||(56462089-56462161)
chr4 (85-133)||(600699-600747)
chr4 (91-158)||(26521546-26521613)
chr4 (38-80)||(600766-600808)
chr4 (20-74)||(50463026-50463080)
chr4 (18-63)||(4419234-4419279)
chr4 (89-118)||(9815881-9815910)
chr4 (37-73)||(7536652-7536688)
chr4 (89-137)||(25504351-25504399)
chr4 (85-133)||(50462953-50463001)
[»] chr7 (27 HSPs)
chr7 (90-149)||(26770454-26770513)
chr7 (85-159)||(983001-983075)
chr7 (85-147)||(32584653-32584715)
chr7 (91-158)||(4501316-4501383)
chr7 (85-148)||(24527641-24527704)
chr7 (85-158)||(3676691-3676764)
chr7 (85-158)||(19277345-19277418)
chr7 (85-158)||(21326820-21326893)
chr7 (85-158)||(27521523-27521596)
chr7 (19-148)||(25186928-25187066)
chr7 (85-158)||(28517269-28517342)
chr7 (19-73)||(10905090-10905144)
chr7 (85-158)||(30216040-30216113)
chr7 (19-80)||(43856846-43856907)
chr7 (114-158)||(1249667-1249711)
chr7 (19-63)||(27521443-27521487)
chr7 (18-73)||(21326919-21326974)
chr7 (85-135)||(2904417-2904467)
chr7 (19-73)||(19277265-19277319)
chr7 (85-147)||(43383221-43383283)
chr7 (85-158)||(22198038-22198111)
chr7 (85-158)||(22239710-22239783)
chr7 (19-80)||(45613916-45613977)
chr7 (85-133)||(9281138-9281186)
chr7 (85-133)||(9292109-9292157)
chr7 (18-70)||(28517371-28517423)
chr7 (85-141)||(40726479-40726535)
[»] chr8 (17 HSPs)
chr8 (85-158)||(500279-500352)
chr8 (19-73)||(35740067-35740121)
chr8 (85-158)||(8882379-8882452)
chr8 (85-146)||(38815346-38815407)
chr8 (85-158)||(39434719-39434792)
chr8 (19-73)||(18804584-18804638)
chr8 (85-158)||(6592627-6592700)
chr8 (85-158)||(24125080-24125153)
chr8 (18-71)||(37514192-37514245)
chr8 (85-141)||(3188021-3188077)
chr8 (19-63)||(40223494-40223538)
chr8 (19-73)||(38815266-38815320)
chr8 (93-159)||(42922108-42922174)
chr8 (85-158)||(6618336-6618409)
chr8 (85-158)||(8619866-8619939)
chr8 (114-158)||(6792257-6792301)
chr8 (91-147)||(10556286-10556342)
[»] scaffold0490 (2 HSPs)
scaffold0490 (85-158)||(6386-6459)
scaffold0490 (19-73)||(6306-6360)
[»] chr6 (15 HSPs)
chr6 (85-158)||(45659-45732)
chr6 (85-158)||(17249287-17249360)
chr6 (91-158)||(357699-357766)
chr6 (85-133)||(34304548-34304596)
chr6 (18-73)||(45758-45813)
chr6 (85-158)||(33220693-33220766)
chr6 (85-141)||(4165921-4165977)
chr6 (85-133)||(29338086-29338134)
chr6 (19-82)||(4206668-4206731)
chr6 (96-149)||(6225135-6225188)
chr6 (19-64)||(32115690-32115735)
chr6 (85-129)||(959632-959676)
chr6 (85-141)||(4206595-4206651)
chr6 (85-141)||(34168920-34168976)
chr6 (85-133)||(34554284-34554332)
[»] chr5 (25 HSPs)
chr5 (85-158)||(27336745-27336818)
chr5 (85-138)||(42921749-42921802)
chr5 (85-158)||(43129586-43129659)
chr5 (85-149)||(15292017-15292081)
chr5 (85-158)||(13166892-13166965)
chr5 (85-158)||(25663014-25663087)
chr5 (85-158)||(32269779-32269852)
chr5 (85-158)||(37873620-37873693)
chr5 (21-73)||(22188736-22188788)
chr5 (87-158)||(35310502-35310573)
chr5 (85-147)||(8100604-8100666)
chr5 (85-131)||(14423730-14423776)
chr5 (85-158)||(26212565-26212638)
chr5 (89-142)||(35456012-35456065)
chr5 (85-133)||(34335389-34335437)
chr5 (86-141)||(8858969-8859024)
chr5 (87-158)||(32230489-32230560)
chr5 (39-74)||(34335329-34335364)
chr5 (85-147)||(3114156-3114218)
chr5 (38-80)||(16598897-16598939)
chr5 (19-61)||(19260276-19260318)
chr5 (19-73)||(37873719-37873773)
chr5 (19-73)||(38875610-38875664)
chr5 (38-70)||(13166994-13167026)
chr5 (19-67)||(27355712-27355760)
[»] chr3 (26 HSPs)
chr3 (85-158)||(37132981-37133054)
chr3 (85-158)||(39583211-39583284)
chr3 (85-158)||(46940752-46940825)
chr3 (85-141)||(26772810-26772866)
chr3 (85-158)||(44198819-44198892)
chr3 (85-133)||(52741519-52741567)
chr3 (85-149)||(53785761-53785825)
chr3 (85-148)||(38670873-38670935)
chr3 (83-148)||(7502003-7502069)
chr3 (19-69)||(26856847-26856897)
chr3 (85-139)||(32546847-32546901)
chr3 (19-71)||(44808-44860)
chr3 (38-70)||(21552659-21552691)
chr3 (26-73)||(32546774-32546821)
chr3 (85-148)||(35484684-35484747)
chr3 (19-62)||(52411983-52412026)
chr3 (85-131)||(7900910-7900956)
chr3 (19-73)||(25325001-25325055)
chr3 (19-73)||(52741593-52741647)
chr3 (19-73)||(53785681-53785735)
chr3 (85-158)||(13582561-13582634)
chr3 (85-134)||(13772501-13772550)
chr3 (18-63)||(51234587-51234632)
chr3 (19-63)||(13582482-13582526)
chr3 (87-147)||(26856755-26856815)
chr3 (85-141)||(38146108-38146164)
[»] scaffold0031 (1 HSPs)
scaffold0031 (85-147)||(49463-49525)
[»] scaffold0148 (2 HSPs)
scaffold0148 (21-89)||(33224-33293)
scaffold0148 (85-141)||(33302-33358)
[»] scaffold0119 (1 HSPs)
scaffold0119 (90-158)||(16191-16259)
[»] scaffold0493 (1 HSPs)
scaffold0493 (85-131)||(8525-8571)
[»] scaffold0009 (1 HSPs)
scaffold0009 (19-73)||(103078-103132)
[»] scaffold0470 (1 HSPs)
scaffold0470 (85-158)||(7654-7727)
[»] scaffold1768 (1 HSPs)
scaffold1768 (19-63)||(275-319)
[»] scaffold0514 (1 HSPs)
scaffold0514 (114-158)||(4322-4366)


Alignment Details
Target: chr2 (Bit Score: 336; Significance: 0; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 18 - 424
Target Start/End: Complemental strand, 34814954 - 34814535
Alignment:
Q  18 aacattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtgtttggaaccgaaa-------------atggtataaaagcatatt 104  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||             ||||||||||||||||||    
T  34814954 aacattgttatgcatgaccatttgaactctatgtagaaggtcaacagtctctggtgttaggaaccgaaagtgtcgaaagcaaatggtataaaagcatatt 34814855  T
Q  105 gattgtcggaacacgttttctcatgtttgaccactttatttgacgaagcttttattaaacgaaaattcaaaataaaatgtggtagaaatagatacacctt 204  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34814854 gattgtcagaacacgctttctcatgtttgatcactttatttgacgaagctttcattaaacgaaaattcaaaataaaatgtggtagaaatagatacacctt 34814755  T
Q  205 gccacttttcaaattgatcaaaaaacgacaccttgccacttttctaattgaaattatgttaaagataatgtggtagatatatatacaccttgtcacgaca 304  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34814754 gccacttttcaaattgatcaaaaaacgacaccttgccacttttctaattgaaattatgttaaagataatgtggtagatatatatacaccttgtcaccaca 34814655  T
Q  305 gccatcgtccaattacttctagcagacagagaaatgaatccaaaattgcaagtacacttgaaaggattgctaaactaatgcaaactccgaaactgaaact 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  34814654 gccatcgtccaattacttctagcagacagagaaatgaatccaaaattgcaagtacacttgaaaggattgctgaactactgcaaactccgaaactgaaact 34814555  T
Q  405 tggtacaattacaacctttg 424  Q
    ||||||||||||||||||||    
T  34814554 tggtacaattacaacctttg 34814535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 41868043 - 41867890
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtgtttggaacc--------------gaaaatggtataaaagcatatt 104  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||| |||||||| | ||||||              | ||||||||||||||||| ||    
T  41868043 acattgttatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtgctaggaacccgaaagtgtcaaaagcaaatggtataaaagcatgtt 41867944  T
Q  105 gattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||| ||||| | |||||||||||||||||||||  |||||| ||||||||    
T  41867943 gattgtcagaacatgctttctcatgtttgaccactttgcttgacgcagctttta 41867890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 27502419 - 27502487
Alignment:
Q  90 gtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  27502419 gtataaaagcatgttgtttgtcggaacacgttttctcatgtttgaccactttgcttgacgcagctttta 27502487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 5532471 - 5532544
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||| |||||||||||| |||||||||  ||||||||||||||||||||||||||||  |||||| ||||||||    
T  5532471 aaatagtataaaagcatgttgattgtcacaacacgttttctcatgtttgaccactttgcttgacgcagctttta 5532544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 272 - 414
Target Start/End: Complemental strand, 34815670 - 34815528
Alignment:
Q  272 atgtggtagatatatatacaccttgtcacgacagccatcgtccaatt-acttctagcagacagagaaatgaatccaaaattgcaagtacacttgaaagga 370  Q
    ||||| || ||||||||| |||||||||  | ||||| | ||||||| |||||  || | |||||| |||||||||||| ||   ||||| |||||||||    
T  34815670 atgtgatatatatatatataccttgtcaacatagccaccttccaatttacttcaggcggccagagagatgaatccaaaactgttggtacatttgaaagga 34815571  T
Q  371 ttgctaaactaatgcaaactccgaaactgaaacttggtacaatt 414  Q
    |||||||| |||| |||||||| ||| |||||||||||||||||    
T  34815570 ttgctaaattaat-caaactcctaaagtgaaacttggtacaatt 34815528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 4413121 - 4413048
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||  |||||  ||||||||    
T  4413121 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacacagctttta 4413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 23484993 - 23484920
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||| | |||||||| |||| ||||||| ||||||| ||||||||    
T  23484993 aaatggtataaaagcatgttgattgtcagaacatgctttctcatatttggccactttgtttgacgtagctttta 23484920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 2888569 - 2888624
Alignment:
Q  86 aatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||| |||||||    
T  2888569 aatggtataaaaacatgttgattgtcagaacacgttttctcatgtttgtccacttt 2888624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 32029221 - 32029170
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctg 70  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  32029221 acattgttatggatgactctttgaactctatgtagaaggtcaacagcctctg 32029170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 3968464 - 3968408
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    |||| ||||||||||||||||||||||  |||| |||||||||| ||||||||||||    
T  3968464 aaattgtataaaagcatattgattgtcaaaacatgttttctcatatttgaccacttt 3968408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 9685470 - 9685414
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||||||||||||||| ||||||||| ||||||| ||| ||||||||| |||||||    
T  9685470 aaatggtataaaagcatgttgattgtcagaacacgctttttcatgtttggccacttt 9685414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 13413323 - 13413374
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctg 70  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||| |||||    
T  13413323 acattgttatgcatgaccttttgaactctatgtagaaggtcaacagcctctg 13413374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 17344690 - 17344761
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagcttt 156  Q
    ||||||||||||||||| ||||||||   ||||||||||||| |||||| |||| ||| |||||| ||||||    
T  17344690 aaatggtataaaagcatgttgattgtgaaaacacgttttctcgtgtttggccaccttacttgacgcagcttt 17344761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 17344610 - 17344664
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||| || |||||    
T  17344610 acattgttatgcatgaccttttgaactctatgtagaaggtcaacagcctatggtg 17344664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 19161838 - 19161765
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| ||||||||| ||||||| ||| ||||||||| |||||||  |||||| || |||||    
T  19161838 aaatggtataaaaacatgttgattgtcagaacacgctttttcatgtttgcccacttttcttgacgcagatttta 19161765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 28225052 - 28225125
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||| ||| |||||||| ||||  ||||||  |||||| ||||||||    
T  28225052 aaatggtataaaagcatgttgattgtcagaatacgctttctcatatttggtcactttgcttgacgcagctttta 28225125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 16351979 - 16351935
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaaca 63  Q
    |||||||| || ||||| |||||||||||||||||||||||||||    
T  16351979 acattgttgtgcatgaccatttgaactctatgtagaaggtcaaca 16351935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 20142860 - 20142816
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaaca 63  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||    
T  20142860 acattgttatgtatgaccttttgaactctatgtataaggtcaaca 20142816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 1296106 - 1296032
Alignment:
Q  84 aaaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||| ||||||||| ||| || |||||| |||||  |||||||||||||| ||| ||| ||||||| ||||||||    
T  1296106 aaaaaggtataaaaacatgtttattgtcagaacatattttctcatgtttggccattttgtttgacgcagctttta 1296032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 11921326 - 11921297
Alignment:
Q  38 tttgaactctatgtagaaggtcaacagtct 67  Q
    ||||||||||||||||||||||||||||||    
T  11921326 tttgaactctatgtagaaggtcaacagtct 11921297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 13147133 - 13147096
Alignment:
Q  104 tgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  13147133 tgattgtcagaacacgctttctcatgtttgaccacttt 13147096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 18745009 - 18744956
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccac 138  Q
    |||||||||||||| || ||||||||| ||||||| |||||| |||||| ||||    
T  18745009 aaatggtataaaagtatgttgattgtcagaacacgctttctcgtgtttggccac 18744956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 2764529 - 2764587
Alignment:
Q  83 gaaaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2764529 gaaaatggcataaaagcatgttgattgtcggaacacgttttctcatgtttgaccacttt 2764587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 19035499 - 19035572
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||  |||||| ||||||||    
T  19035499 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcagctttta 19035572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 45659703 - 45659630
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||| |||||| |||||| |||| ||| |||||| ||||||||    
T  45659703 aaatggtataaaagcatgttgattgtcagaacacgctttctcgtgtttggccaccttacttgacgcagctttta 45659630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 29169848 - 29169785
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgac 148  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||||| |||| ||| |||||    
T  29169848 aaatggtataaaagcatgttgattgtcagaacacgttttctcgtgtttggccaccttacttgac 29169785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 20259852 - 20259779
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| ||||||||| ||||||| |||||||| ||| ||||||||  |||||| ||||||||    
T  20259852 aaatggtataaaaacatgttgattgtcagaacacgctttctcatttttaaccactttgcttgacgtagctttta 20259779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 31737378 - 31737305
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||| | ||||||||||||||| |||||||  ||||||  |||||||    
T  31737378 aaatggtataaaagcatgttgattgtcagaatatgttttctcatgtttggccactttgcttgacgccgctttta 31737305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 34644618 - 34644691
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| | | ||||| ||||||| ||||||||||||| ||||||| ||||||| | ||||||    
T  34644618 aaatggtataaaagcatgtaggttgtcagaacacgctttctcatgtttggccactttgtttgacgcaactttta 34644691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 21473055 - 21473119
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacg 149  Q
    ||||||||||||| ||| ||||||||| ||||||| ||||||||||||| ||| |||| ||||||    
T  21473055 aaatggtataaaaacatgttgattgtcagaacacgctttctcatgtttggccattttacttgacg 21473119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 50314679 - 50314623
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||||||||||||||| ||||||||  ||||| ||||| |||||||||||||||||    
T  50314679 aaatggtataaaagcatgttgattgtgagaacaagttttgtcatgtttgaccacttt 50314623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 21472975 - 21473029
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||| ||||||||    
T  21472975 acattgctatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtg 21473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 37200034 - 37200108
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagcttttat 159  Q
    ||||||||||||| ||||||||||||  | ||| | ||||| |||||||||||||||| |||||| | |||||||    
T  37200034 aaatggtataaaaacatattgattgttagcacatgctttcttatgtttgaccactttacttgacgtaacttttat 37200108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 50161473 - 50161399
Alignment:
Q  84 aaaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||| ||||||||||| ||||||||  ||||||| ||||||||||||| |||||||  |||||| | ||||||    
T  50161473 aaaatgatataaaagcatgttgattgtgagaacacgctttctcatgtttgtccactttgcttgacgcaactttta 50161399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 4862124 - 4862080
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaaca 63  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||    
T  4862124 acattgttatgcatgaccctttgaactctatgtagaaggtcaaca 4862080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 28041182 - 28041118
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacg 149  Q
    ||||||||||||| | | ||||||||| ||||||  ||||||||||||| ||||||| |||||||    
T  28041182 aaatggtataaaaacctgttgattgtcagaacacactttctcatgtttggccactttgtttgacg 28041118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 24177646 - 24177595
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctg 70  Q
    |||||| |||| |||||| ||||||||||||||||||||| ||||| |||||    
T  24177646 acattgctatgcatgactttttgaactctatgtagaaggtaaacagcctctg 24177595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28041262 - 28041208
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||| |||| |||||  ||||||||||||||||||||||||| | ||||||||    
T  28041262 acattgctatgcatgaccttttgaactctatgtagaaggtcaaccgcctctggtg 28041208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 4862044 - 4861971
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||| ||||||||| || ||| ||||| ||| ||| ||||||||||||||||| |||| |||||| | ||||||    
T  4862044 aaattgtataaaagtatgttgcttgtcagaagacgctttctcatgtttgaccattttacttgacgcaactttta 4861971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 2898676 - 2898728
Alignment:
Q  21 attgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||||| ||||   ||||||||||||||||||||||||||  ||||||||    
T  2898676 attgttatgcatgatcttttgaactctatgtagaaggtcaacaacctctggtg 2898728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 36486944 - 36487000
Alignment:
Q  91 tataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttga 147  Q
    |||||||  ||||||||||||  |||||| |||||||| ||||||||||||| ||||    
T  36486944 tataaaaagatattgattgtcaaaacacgctttctcatatttgaccactttacttga 36487000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 53619638 - 53619711
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||  |||||| ||||||||    
T  53619638 aaatggtataaaagcatgttgattgtcagaacacgttttctcatgtttggccactttgcttgacgcagctttta 53619711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 30940793 - 30940721
Alignment:
Q  86 aatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||| | ||||||    
T  30940793 aatggtataaaagcatgttgattgtcagaacacgctttctcatgtttgaccactttacttgacgcaactttta 30940721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 34107832 - 34107777
Alignment:
Q  18 aacattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  34107832 aacattgttatgcatgactttttgaactctatgtagaaggtcaacagcctctggtg 34107777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 50000972 - 50000907
Alignment:
Q  93 taaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||||||||  |||||| ||||||||    
T  50000972 taaaagcatgttgattgtcagaacacgctttctcatgtttgaccactttgcttgacgcagctttta 50000907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 132437 - 132510
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||  ||| |||  |||||| ||||||||    
T  132437 aaatggtataaaagcatgttgattgtcagaacacgatttctcatgttttgccattttgcttgacgcagctttta 132510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 23255756 - 23255812
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||||||||||||||| || |||||| ||||||| ||||||||||||| |||||||    
T  23255756 aaatggtataaaagcatgttaattgtcagaacacgctttctcatgtttggccacttt 23255812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 53170485 - 53170539
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||| ||||||||    
T  53170485 acattgctatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtg 53170539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 12053465 - 12053538
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||| ||||||| | | ||||||||  ||||||| ||||||||||||||| ||||| ||||||| ||||||||    
T  12053465 aaatgatataaaaacgttttgattgttagaacacgatttctcatgtttgacaactttgtttgacgcagctttta 12053538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 12918427 - 12918354
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||| |||||||||  | ||||||||| ||||||| ||||| ||||||||||||||| ||||||| | ||||||    
T  12918427 aaatagtataaaagtgtgttgattgtcagaacacgatttcttatgtttgaccactttgtttgacgcaactttta 12918354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 31847139 - 31847212
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||| |||| ||| |||| |||| ||||| | |||||||||||||||||||||  |||||| ||||||||    
T  31847139 aaatggtaaaaaaacatgttgactgtcagaacatggtttctcatgtttgaccactttgcttgacgcagctttta 31847212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 45386116 - 45386043
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||||||||  | |||||||||| ||||||| ||||| |||||||||||||||  |||||  ||||||||    
T  45386116 aaatggtataaaaagaaattgattgtcagaacacgctttcttatgtttgaccactttccttgacttagctttta 45386043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 55933517 - 55933444
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||  |||||   ||||||||||||| ||||||| ||||||| | ||||||    
T  55933517 aaatggtataaaagcatgttgattgttagaacaaactttctcatgtttggccactttgtttgacgcaactttta 55933444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 56462161 - 56462089
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| ||||||||| ||||||| ||| ||||||||| ||||||| ||||||| | ||||||    
T  56462161 aaatggtataaaaacatgttgattgtcagaacacgctttatcatgtttg-ccactttgtttgacgcaactttta 56462089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 600747 - 600699
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttg 133  Q
    ||||||||||||||||| || |||||  |||||||||||||||||||||    
T  600747 aaatggtataaaagcatgttaattgttagaacacgttttctcatgtttg 600699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 26521546 - 26521613
Alignment:
Q  91 tataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||| |||||||||  |||||||||| ||||||||  ||||||| ||||||| | ||||||    
T  26521546 tataaaagcatgttgattgtcataacacgttttttcatgtttagccactttgtttgacgcaactttta 26521613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 80
Target Start/End: Complemental strand, 600808 - 600766
Alignment:
Q  38 tttgaactctatgtagaaggtcaacagtctctggtgtttggaa 80  Q
    ||||||||||||||||||||||||||  |||||||||| ||||    
T  600808 tttgaactctatgtagaaggtcaacaacctctggtgttaggaa 600766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 50463080 - 50463026
Alignment:
Q  20 cattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtgt 74  Q
    |||||||||| ||| |  ||| ||||||| |||||||||||||||||||||||||    
T  50463080 cattgttatgcatggccctttaaactctacgtagaaggtcaacagtctctggtgt 50463026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 4419234 - 4419279
Alignment:
Q  18 aacattgttatgtatgactatttgaactctatgtagaaggtcaaca 63  Q
    |||||||||||| || ||  ||||||||||||||||||||||||||    
T  4419234 aacattgttatgcataaccctttgaactctatgtagaaggtcaaca 4419279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 118
Target Start/End: Complemental strand, 9815910 - 9815881
Alignment:
Q  89 ggtataaaagcatattgattgtcggaacac 118  Q
    ||||||||||||||||||||||||||||||    
T  9815910 ggtataaaagcatattgattgtcggaacac 9815881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 7536688 - 7536652
Alignment:
Q  37 atttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||||||||||||||||||||||||  ||||||||    
T  7536688 atttgaactctatgtagaaggtcaacaacctctggtg 7536652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 25504351 - 25504399
Alignment:
Q  89 ggtataaaagcatattgattgtcggaacacgttttctcatgtttgacca 137  Q
    ||||||||| ||| | ||||||  |||||||||||||||||||||||||    
T  25504351 ggtataaaaacatgtcgattgttagaacacgttttctcatgtttgacca 25504399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 50463001 - 50462953
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttg 133  Q
    ||||||||| ||||||| ||||||||||||| ||  |||||||||||||    
T  50463001 aaatggtatgaaagcatgttgattgtcggaagacactttctcatgtttg 50462953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 26770454 - 26770513
Alignment:
Q  90 gtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacg 149  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  26770454 gtataaaagcatatagattgtcagaacacgttttctcatgttttaccactttatttgacg 26770513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 983001 - 983075
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagcttttat 159  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||  |||||| |||||||||    
T  983001 aaatggtataaaagcatgttgattgtcagaacacgatttctcatgtttggccactttgcttgacgcagcttttat 983075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 32584653 - 32584715
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttga 147  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  32584653 aaatggtgtaaaagcatcttgattgtcagaacacgttttctcatgtttgaccactttgtttga 32584715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 4501316 - 4501383
Alignment:
Q  91 tataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||| ||||||| ||||||| ||||||||    
T  4501316 tataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgtttgacgcagctttta 4501383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 24527641 - 24527704
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgac 148  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||||| |||||    
T  24527641 aaatggtataaaagcatgttgattgtcagaacacgttttctcatgttttcccactttacttgac 24527704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 3676691 - 3676764
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||||||||| ||  ||||||| ||||| |||||||||||||||  |||||| ||||||||    
T  3676691 aaatggtataaaagcatattgatagtaagaacacgctttctgatgtttgaccactttgcttgacgcagctttta 3676764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 19277345 - 19277418
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||| | |||||  |||||| ||||||||    
T  19277345 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggctactttgcttgacgcagctttta 19277418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 21326893 - 21326820
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||  ||||||  |||||||    
T  21326893 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcggctttta 21326820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 27521523 - 27521596
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||||| ||| ||| | ||||||    
T  27521523 aaattgtataaatgcatgttgattgtcagaacacgttttctcatgtttgaccactttgtttaacgcaactttta 27521596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 25187066 - 25186928
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtgtttggaa-ccga--------aaatggtataaaagcatattgattg 109  Q
    |||||| |||| |||||  |||||||||||| |||||||||||||  |||| ||||| |||| ||||        |||||||| |||| ||| ||||||     
T  25187066 acattgctatgcatgaccttttgaactctatatagaaggtcaacaacctctagtgttcggaaaccgatcaaaagcaaatggtagaaaaacatgttgatta 25186967  T
Q  110 tcggaacacgttttctcatgtttgaccactttatttgac 148  Q
    |||||||||| ||||||||||| |||||||||| |||||    
T  25186966 tcggaacacgctttctcatgttagaccactttacttgac 25186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 28517342 - 28517269
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| |||||||||  |||||| ||||||||||||| |||||||  |||||| ||||||||    
T  28517342 aaatggtataaaaacatgttgattgtctaaacacgctttctcatgtttggccactttgcttgacgcagctttta 28517269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 10905090 - 10905144
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||||||| ||| || ||||||||||||||||||||||||||  ||||||||    
T  10905090 acattgttatgcatggctctttgaactctatgtagaaggtcaacatactctggtg 10905144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 30216113 - 30216040
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| |||||||||  |||||| |||||||| |||||||| |||  |||||| ||||||||    
T  30216113 aaatggtataaaaacatgttgattgtcaaaacacgctttctcatatttgaccattttgcttgacgcagctttta 30216040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 43856846 - 43856907
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtgtttggaa 80  Q
    |||||||| || |||||  ||||||||||||||||||||||||||  |||||||||| ||||    
T  43856846 acattgttgtgcatgaccctttgaactctatgtagaaggtcaacaacctctggtgttaggaa 43856907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 1249667 - 1249711
Alignment:
Q  114 aacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||| ||||||||||||||||||||||||||||| || |||||    
T  1249667 aacacgctttctcatgtttgaccactttatttgacgcaggtttta 1249711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 27521443 - 27521487
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaaca 63  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||    
T  27521443 acattgttatgcatgaccttttgaactctatgtagaaggtcaaca 27521487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 21326974 - 21326919
Alignment:
Q  18 aacattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||| |||| |||||  ||||||||||||||| ||||||||||| ||||||||    
T  21326974 aacattgctatgcatgaccttttgaactctatgtaaaaggtcaacagcctctggtg 21326919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 2904417 - 2904467
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgac 135  Q
    ||||| ||||||| ||| ||||||||||||||| | |||||||||||||||    
T  2904417 aaatgatataaaatcatgttgattgtcggaacatgctttctcatgtttgac 2904467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 19277265 - 19277319
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||  ||||||||    
T  19277265 acattgctatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtg 19277319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 43383221 - 43383283
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttga 147  Q
    |||||| |||||||||| |||||||  |||||| | ||||||||| ||| |||||||||||||    
T  43383221 aaatggcataaaagcatgttgattgctggaacatgctttctcatggttggccactttatttga 43383283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 22198038 - 22198111
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| |||||||| |||||||  |||||||||||||  ||||||  ||||||  |||||||    
T  22198038 aaatggtataaaaacatgttgattgttggaacacactttctcatgtttggtcactttgcttgacgccgctttta 22198111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 22239783 - 22239710
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| |||||||| |||||||  |||||||||||||  ||||||  ||||||  |||||||    
T  22239783 aaatggtataaaaacatgttgattgttggaacacactttctcatgtttggtcactttgcttgacgccgctttta 22239710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 45613977 - 45613916
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtgtttggaa 80  Q
    ||||||||||| ||||   ||||||||||||||||||||  ||||| |||||||| ||||||    
T  45613977 acattgttatgcatgaacttttgaactctatgtagaaggctaacagcctctggtgcttggaa 45613916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 9281186 - 9281138
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttg 133  Q
    |||| |||||||||||| ||||||||  ||||||| |||||||||||||    
T  9281186 aaatagtataaaagcatgttgattgttagaacacgctttctcatgtttg 9281138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 9292157 - 9292109
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttg 133  Q
    |||| |||||||||||| ||||||||  ||||||| |||||||||||||    
T  9292157 aaatagtataaaagcatgttgattgttagaacacgctttctcatgtttg 9292109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 28517423 - 28517371
Alignment:
Q  18 aacattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctg 70  Q
    |||||||||||| || ||  |||| |||||||||||||||||||| |||||||    
T  28517423 aacattgttatgcataaccctttggactctatgtagaaggtcaactgtctctg 28517371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 40726535 - 40726479
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||||||||||| ||| ||||||||| |||||| |||| | ||||||| |||||||    
T  40726535 aaatggtataaaaacatgttgattgtcagaacacattttattatgtttggccacttt 40726479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 500279 - 500352
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||  |||||| | ||||||    
T  500279 aaatggtataaaagcatgttgattgtcagaacacgttttctcatgtttggccactttgcttgacgcaactttta 500352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 35740121 - 35740067
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  35740121 acattgttatgcatgactttttgaactctatgtagaaggtcaacaatctctggtg 35740067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 8882379 - 8882452
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||||| |||||||  |||||| || |||||    
T  8882379 aaatggtttaaaagcatattgattgtcagaacacgctttctcatgtttggccactttgcttgacgcaggtttta 8882452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 38815346 - 38815407
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttg 146  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||| ||||    
T  38815346 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgtttg 38815407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 39434719 - 39434792
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||  |||||| | ||||||    
T  39434719 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcaactttta 39434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 18804584 - 18804638
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||||||| |||||  |||||| |||||||||||||||||||| ||||||||    
T  18804584 acattgttatgcatgaccttttgaaatctatgtagaaggtcaacagcctctggtg 18804638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 6592627 - 6592700
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||| ||||| ||| ||||||||  ||||||| ||||||||||||| |||||||  |||||| ||||||||    
T  6592627 aaatggtttaaaatcatgttgattgtgagaacacgctttctcatgtttggccactttgcttgacgcagctttta 6592700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 24125080 - 24125153
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| || |||| ||||||||||||| ||| |||  |||| | ||||||||    
T  24125080 aaatggtataaaagcatgttgattgtcagagcacgctttctcatgtttggccattttgcttgatgcagctttta 24125153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 37514192 - 37514245
Alignment:
Q  18 aacattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctgg 71  Q
    ||||||| |||| |||||  ||||||||||||||||||||||||||| ||||||    
T  37514192 aacattgatatgcatgaccttttgaactctatgtagaaggtcaacagcctctgg 37514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 3188021 - 3188077
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||||||||||||||| ||||||||| ||||||| || |||||||||  |||||||    
T  3188021 aaatggtataaaagcatgttgattgtcagaacacgcttcctcatgttttgccacttt 3188077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 40223538 - 40223494
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaaca 63  Q
    ||||||||||| |||||  ||||||||||||||||||||||||||    
T  40223538 acattgttatgcatgaccttttgaactctatgtagaaggtcaaca 40223494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 38815266 - 38815320
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||  ||||||||    
T  38815266 acattgctatgcatgaccctttgaactctatgtagaaggtcaacaccctctggtg 38815320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 42922174 - 42922108
Alignment:
Q  93 taaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagcttttat 159  Q
    ||||||||| |||||||||  ||||||||||||||  |||||||| ||| ||||||| | |||||||    
T  42922174 taaaagcattttgattgtcaaaacacgttttctcaaatttgaccattttgtttgacgcaacttttat 42922108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 6618336 - 6618409
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||| ||||| ||| ||||||||  ||||||| |||||||||||| || ||| ||||||||| | ||||||    
T  6618336 aaatggtttaaaatcatgttgattgtgagaacacgctttctcatgtttaactactctatttgacgcaactttta 6618409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 8619866 - 8619939
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||  |||||||||  || ||| ||| ||||||||||||| |||| |||||| | ||||||    
T  8619866 aaatggtataaaagcacgttgattgtcaaaatacgctttttcatgtttgaccattttacttgacgcaactttta 8619939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 6792257 - 6792301
Alignment:
Q  114 aacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||||||||||||||| ||||| | ||||||| ||||||||    
T  6792257 aacacgttttctcatgtttggccactctgtttgacgtagctttta 6792301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 10556342 - 10556286
Alignment:
Q  91 tataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttga 147  Q
    ||||||| ||| |||||| || ||| | ||||||||||||||||||||||| |||||    
T  10556342 tataaaaacatgttgattttcagaatatgttttctcatgtttgaccactttctttga 10556286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 6386 - 6459
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||||| |||||| ||||||||| ||||||| ||||||||||||| |||||||| |||||| | ||||||    
T  6386 aaatggtatagaagcatgttgattgtcagaacacgctttctcatgtttggccactttacttgacgcaactttta 6459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 6306 - 6360
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||| ||||||||    
T  6306 acattgctatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtg 6360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 45732 - 45659
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||  |||| | ||||||||    
T  45732 aaatggaataaaagcatgttgattgtcagaacacgttttctcatgtttgatcactttgcttgatgcagctttta 45659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 17249360 - 17249287
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||  ||||||||||||| ||||||| ||||||| | ||||||    
T  17249360 aaatggtataaaagcatgttgattgtcagaacacactttctcatgtttggccactttgtttgacgcaactttta 17249287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 357766 - 357699
Alignment:
Q  91 tataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||| || |||||| ||||||| ||||||||||||| |||||||  |||||||||||||||    
T  357766 tataaaagcatgttcattgtcagaacacgctttctcatgtttggccactttgcttgacgaagctttta 357699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 34304548 - 34304596
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttg 133  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  34304548 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttg 34304596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 45813 - 45758
Alignment:
Q  18 aacattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||| |||| |||||  ||||||||||||||||||||||||||| ||||||||    
T  45813 aacattgctatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtg 45758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 33220766 - 33220693
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| |||||||||   ||||| ||||||||||||| |||||||  |||| | ||||||||    
T  33220766 aaatggtataaaagcatgttgattgtcaacacacgctttctcatgtttggccactttgcttgatgcagctttta 33220693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 4165977 - 4165921
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||| ||||||||||| ||||||||| ||||||| ||||||||||||  |||||||    
T  4165977 aaatgatataaaagcatgttgattgtcagaacacgctttctcatgtttagccacttt 4165921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 29338134 - 29338086
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttg 133  Q
    ||||||||||| ||||| ||||||||  |||||||||||||||||||||    
T  29338134 aaatggtataagagcatgttgattgttagaacacgttttctcatgtttg 29338086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 4206731 - 4206668
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtgtttggaacc 82  Q
    ||||||| ||| |||||  ||||||||||||||||||||||||||  |||||||| | ||||||    
T  4206731 acattgtcatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtgctaggaacc 4206668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 6225135 - 6225188
Alignment:
Q  96 aagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacg 149  Q
    |||||| |||||||||  ||||   |||||||||||||||||||||||||||||    
T  6225135 aagcatgttgattgtcacaacaaaatttctcatgtttgaccactttatttgacg 6225188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 32115690 - 32115735
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacag 64  Q
    ||||||||||| |||||  |||||||||| ||||||||||||||||    
T  32115690 acattgttatgcatgaccttttgaactctttgtagaaggtcaacag 32115735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 959632 - 959676
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatg 129  Q
    ||||||||||||  ||| ||||||||| |||||||||||||||||    
T  959632 aaatggtataaagacatgttgattgtcagaacacgttttctcatg 959676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 4206651 - 4206595
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||| ||||||||||| || |||||| ||||||| ||||||||||||  |||||||    
T  4206651 aaatgatataaaagcatgttcattgtcagaacacgctttctcatgtttagccacttt 4206595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 34168920 - 34168976
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||||||||||||||| ||| |||||  |||| | ||||||||||||| |||||||    
T  34168920 aaatggtataaaagcatgttgcttgtccaaacatgctttctcatgtttggccacttt 34168976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 34554332 - 34554284
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttg 133  Q
    ||||||||||||| ||| |||||| || ||||||| |||||||||||||    
T  34554332 aaatggtataaaaacatcttgattatcagaacacgctttctcatgtttg 34554284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 27336745 - 27336818
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||||||||| || ||||||||| ||||||| |||||||||||||||||||||  |||||| | ||||||    
T  27336745 aaatggtataaaagtatgttgattgtcagaacacgatttctcatgtttgaccactttgcttgacgcaactttta 27336818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 42921749 - 42921802
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccac 138  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  42921749 aaatggtataaaagcatgttgattgtcagaacacgttttctcgtgtttgaccac 42921802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 43129586 - 43129659
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||  |||||| | ||||||    
T  43129586 aaatggtagaaaaacatgttgattgtcagaacacgttttctcatgtttgaccactttgcttgacgcatctttta 43129659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 15292081 - 15292017
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacg 149  Q
    |||| |||||||| ||| ||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  15292081 aaattgtataaaaacatgttgattgtcagaacacgttttctcatgtttggccactttgtttgacg 15292017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 13166965 - 13166892
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||||  |||||||  |||||| || |||||    
T  13166965 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttagccactttgcttgacgcagatttta 13166892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 25663087 - 25663014
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| |||||| || ||||||| ||||||||||||| ||||||| ||||| | ||||||||    
T  25663087 aaatggtataaaaacatgttgattatcagaacacgctttctcatgtttggccactttgtttgatgcagctttta 25663014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 32269852 - 32269779
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||| | ||||||||| ||||||  |||||||||||||||||||||  |||| | ||||||||    
T  32269852 aaatggtataaaagcgtgttgattgtcagaacacactttctcatgtttgaccactttggttgatgcagctttta 32269779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 37873693 - 37873620
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| ||||||||| ||||||| ||||||||||||| |||||||  |||||| | ||||||    
T  37873693 aaatggtataaaaacatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcaactttta 37873620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 22188788 - 22188736
Alignment:
Q  21 attgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||||| |||||  ||||||||||||||||||||||||||| ||||||||    
T  22188788 attgttatgcatgaccttttgaactctatgtagaaggtcaacagcctctggtg 22188736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 35310502 - 35310573
Alignment:
Q  87 atggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||| ||||||||| ||||| | ||||||||||||| |||||||  |||||| | ||||||    
T  35310502 atggtataaaagcatgttgattgtcagaacatgctttctcatgtttggccactttgcttgacgcatctttta 35310573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 8100604 - 8100666
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttga 147  Q
    ||||||||||||||||| |  ||||||  |||||||||||||||||||||||| |||| ||||    
T  8100604 aaatggtataaaagcatgtaaattgtcacaacacgttttctcatgtttgaccattttacttga 8100666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 14423730 - 14423776
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtt 131  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  14423730 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtt 14423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 26212638 - 26212565
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||| ||| ||| ||| ||||||||||||| |||||||  |||||| | ||||||    
T  26212638 aaatggtataaaagcatgttgatcgtcagaatacgctttctcatgtttggccactttgcttgacgcaactttta 26212565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 35456012 - 35456065
Alignment:
Q  89 ggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttta 142  Q
    ||||||||||||| ||||||||  ||||||| ||||||||||||||||| ||||    
T  35456012 ggtataaaagcatgttgattgttagaacacgctttctcatgtttgaccatttta 35456065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 34335389 - 34335437
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttg 133  Q
    ||||||||||||||||| ||||||||| | ||||| |||||||||||||    
T  34335389 aaatggtataaaagcatgttgattgtcaggacacgctttctcatgtttg 34335437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 8858969 - 8859024
Alignment:
Q  86 aatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    |||| ||||||| ||| ||||||||| ||||||| ||||||||||||||| |||||    
T  8858969 aatgatataaaaacatgttgattgtcagaacacgctttctcatgtttgactacttt 8859024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 32230560 - 32230489
Alignment:
Q  87 atggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| | ||||||||| |||||| ||||||||||||||  ||||||  |||||| | ||||||    
T  32230560 atggtataaaagcttgttgattgtcagaacacattttctcatgtttggtcactttgcttgacgcaactttta 32230489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 34335329 - 34335364
Alignment:
Q  39 ttgaactctatgtagaaggtcaacagtctctggtgt 74  Q
    |||||||||||||||||||||||||| |||||||||    
T  34335329 ttgaactctatgtagaaggtcaacagcctctggtgt 34335364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 3114218 - 3114156
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttga 147  Q
    ||||||||||||| ||| |||| |||| ||||| | ||||||||||||| ||||||| |||||    
T  3114218 aaatggtataaaaacatgttgactgtcagaacatgctttctcatgtttggccactttgtttga 3114156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 80
Target Start/End: Original strand, 16598897 - 16598939
Alignment:
Q  38 tttgaactctatgtagaaggtcaacagtctctggtgtttggaa 80  Q
    ||||||||||||||||||||||||||  || ||||||||||||    
T  16598897 tttgaactctatgtagaaggtcaacatcctttggtgtttggaa 16598939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 19260276 - 19260318
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaa 61  Q
    |||||||||||||||||  ||||||||||| ||||||||||||    
T  19260276 acattgttatgtatgaccctttgaactctaagtagaaggtcaa 19260318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 37873773 - 37873719
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||||| || |||||  ||||||||||||||||||||||||||  ||||||||    
T  37873773 acattgttctgcatgaccctttgaactctatgtagaaggtcaacaacctctggtg 37873719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 38875610 - 38875664
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||||||| |||||  ||||||||||| ||||||||||| ||| ||||||||    
T  38875610 acattgttatgcatgaccttttgaactctacgtagaaggtcagcagcctctggtg 38875664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 13167026 - 13166994
Alignment:
Q  38 tttgaactctatgtagaaggtcaacagtctctg 70  Q
    |||| ||||||||||||||||||||||||||||    
T  13167026 tttggactctatgtagaaggtcaacagtctctg 13166994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 27355760 - 27355712
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtct 67  Q
    ||||| ||||||||||   ||||||||||||||||||||||||| ||||    
T  27355760 acattattatgtatgagactttgaactctatgtagaaggtcaacggtct 27355712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 37133054 - 37132981
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||| ||||||||| ||||||| |||||||||||| ||||||||  |||||| ||||||||    
T  37133054 aaatggtataaaaacatgttgattgtcagaacacgctttctcatgtttaaccactttgcttgacgtagctttta 37132981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 39583284 - 39583211
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||| ||||||||||| ||||||||| ||||||| ||||||||||||| |||||||  |||||| ||||||||    
T  39583284 aaatgatataaaagcatgttgattgtcagaacacgctttctcatgtttggccactttgcttgacgcagctttta 39583211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 46940825 - 46940752
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||||||| |||||||  |||||| | ||||||    
T  46940825 aaatggtataaaagcatgttgattgtcggaacatgttttctaatgtttggccactttgcttgacgcatctttta 46940752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 26772810 - 26772866
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||    
T  26772810 aaatggtataaaagcatgttgattgtcagaacacgttttctgatgtttggccacttt 26772866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 44198819 - 44198892
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||||||| |||||| || ||||||| ||||||||||||| |||||||  |||||| | ||||||    
T  44198819 aaatggtataaaagcatgttgattctcagaacacgctttctcatgtttggccactttgcttgacgcaactttta 44198892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 52741567 - 52741519
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttg 133  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  52741567 aaatggtataaaagcatgttgattgtcagaacacgctttctcatgtttg 52741519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 53785761 - 53785825
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacg 149  Q
    ||||||||||||||||| ||||||||| ||||||| |||||| |||||| |||| ||| ||||||    
T  53785761 aaatggtataaaagcatgttgattgtcagaacacgctttctcgtgtttggccaccttacttgacg 53785825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 38670935 - 38670873
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgac 148  Q
    |||| |||||||||||| ||||||||| ||||||| |||||||||||||| ||||||| |||||    
T  38670935 aaattgtataaaagcatgttgattgtcagaacacgctttctcatgtttga-cactttacttgac 38670873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 7502069 - 7502003
Alignment:
Q  83 gaaaatggtataaaag-catattgattgtcggaacacgttttctcatgtttgaccactttatttgac 148  Q
    |||||||||||||||  ||| ||||||||  ||||||| |||||||||||||||||||||| |||||    
T  7502069 gaaaatggtataaaaaacatgttgattgttcgaacacgctttctcatgtttgaccactttacttgac 7502003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 26856897 - 26856847
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctct 69  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||||||||    
T  26856897 acattgctatgcatgaccctttgaactctatgtagaaggtcaacagtctct 26856847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 32546847 - 32546901
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccact 139  Q
    |||||||||||||| || ||||||||| ||||||| ||||||||||||| |||||    
T  32546847 aaatggtataaaagtatgttgattgtccgaacacgctttctcatgtttggccact 32546901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 44808 - 44860
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctgg 71  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||| ||||||    
T  44808 acattgctatgcatgaccttttgaactctatgtagaaggtcaacagcctctgg 44860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 21552659 - 21552691
Alignment:
Q  38 tttgaactctatgtagaaggtcaacagtctctg 70  Q
    |||||||||||||||||||||||||||||||||    
T  21552659 tttgaactctatgtagaaggtcaacagtctctg 21552691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 32546774 - 32546821
Alignment:
Q  26 tatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||| |||||| ||||||||||||||||||||||||||| || |||||    
T  32546774 tatgcatgactttttgaactctatgtagaaggtcaacagcctttggtg 32546821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 35484747 - 35484684
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgac 148  Q
    |||| ||| |||| ||| |||||||| ||||||  ||||||||||||||||||||||| |||||    
T  35484747 aaatagtacaaaaacatgttgattgttggaacatattttctcatgtttgaccactttacttgac 35484684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 52412026 - 52411983
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaac 62  Q
    ||||||||||| |||||  |||||||||||||||||||||||||    
T  52412026 acattgttatgcatgaccctttgaactctatgtagaaggtcaac 52411983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 7900910 - 7900956
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtt 131  Q
    ||||||||||||||||| ||||||||| ||| ||| |||||||||||    
T  7900910 aaatggtataaaagcatgttgattgtcagaaaacgctttctcatgtt 7900956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 25325001 - 25325055
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||| |||| ||||  ||||||||||||||||||||||||||| ||| |||||    
T  25325001 acattgctatgcatgatcatttgaactctatgtagaaggtcaacaatctatggtg 25325055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 52741647 - 52741593
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||  ||||||||    
T  52741647 acattgctatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtg 52741593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 53785681 - 53785735
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||  ||||||||    
T  53785681 acattgctatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtg 53785735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 13582561 - 13582634
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||||||||| ||  ||||||||| ||||||  ||||| |||||||| ||||||  |||||| ||||||||    
T  13582561 aaatggtataaaaacacgttgattgtcagaacacactttcttatgtttgatcactttgattgacgcagctttta 13582634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 13772501 - 13772550
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttga 134  Q
    ||||||||||||||  | |||||||  |||||||||||||||||||||||    
T  13772501 aaatggtataaaagtgtgttgattgatggaacacgttttctcatgtttga 13772550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 51234587 - 51234632
Alignment:
Q  18 aacattgttatgtatgactatttgaactctatgtagaaggtcaaca 63  Q
    |||||||||||| || ||  ||||||||||||||||||||||||||    
T  51234587 aacattgttatgcataaccttttgaactctatgtagaaggtcaaca 51234632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 13582482 - 13582526
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaaca 63  Q
    ||||||||||| |||||  |||||||||| |||||||||||||||    
T  13582482 acattgttatgcatgaccttttgaactctctgtagaaggtcaaca 13582526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 26856815 - 26856755
Alignment:
Q  87 atggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttga 147  Q
    ||||||||||||||| |||||||||  |||||| ||| |||| |||||||| |||| ||||    
T  26856815 atggtataaaagcatgttgattgtcacaacacgctttatcatatttgaccattttacttga 26856755  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 38146108 - 38146164
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||||||||||| ||| |||||||||  |||||||| ||||  |||||||||||||    
T  38146108 aaatggtataaaaacatgttgattgtcaaaacacgttgtctcgcgtttgaccacttt 38146164  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 49463 - 49525
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttga 147  Q
    ||||||||||||||||  ||||||||| ||||||| |||||||  |||||||||||| |||||    
T  49463 aaatggtataaaagcacgttgattgtcagaacacgatttctcacatttgaccactttgtttga 49525  T

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Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 33224 - 33293
Alignment:
Q  21 attgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtgtttgg-aaccgaaaatg 89  Q
    |||| |||| |||||  ||||||||||||||||||||||||||  |||||||||| || |||||||||||    
T  33224 attgctatgcatgaccttttgaactctatgtagaaggtcaacaacctctggtgttaggaaaccgaaaatg 33293  T

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Target: scaffold0148; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 33302 - 33358
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccacttt 141  Q
    ||||||||||||| ||| ||||||||| ||||||| ||||||||||||  |||||||    
T  33302 aaatggtataaaaacatgttgattgtcagaacacgctttctcatgtttagccacttt 33358  T

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Target: scaffold0119 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 16191 - 16259
Alignment:
Q  90 gtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||| ||| || |||||| ||||| ||||||||||||||| ||| ||| ||||||| ||||||||    
T  16191 gtataaaaacatgtttattgtcagaacatgttttctcatgtttggccattttgtttgacgcagctttta 16259  T

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Target: scaffold0493 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 8571 - 8525
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtt 131  Q
    ||||||||||||| ||| ||||||||| ||||| |||||||||||||    
T  8571 aaatggtataaaaacatgttgattgtcagaacatgttttctcatgtt 8525  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 103078 - 103132
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaacagtctctggtg 73  Q
    ||||||||||| |||||  ||||| ||| ||||||||||||||||| ||||||||    
T  103078 acattgttatgcatgaccttttgagctcgatgtagaaggtcaacagcctctggtg 103132  T

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Target: scaffold0470 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 7654 - 7727
Alignment:
Q  85 aaatggtataaaagcatattgattgtcggaacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    ||||||| ||||| ||| ||||||||  ||||||| |||||||||||| || ||| ||||||||| | ||||||    
T  7654 aaatggtttaaaatcatgttgattgtgagaacacgctttctcatgtttaactactctatttgacgcaactttta 7727  T

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Target: scaffold1768 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 319 - 275
Alignment:
Q  19 acattgttatgtatgactatttgaactctatgtagaaggtcaaca 63  Q
    |||||| ||||||||||| |||||||| |||| ||||||||||||    
T  319 acattgctatgtatgactttttgaactttatgcagaaggtcaaca 275  T

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Target: scaffold0514 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 4366 - 4322
Alignment:
Q  114 aacacgttttctcatgtttgaccactttatttgacgaagctttta 158  Q
    |||||||||||||||||||| ||||| | ||||||| ||||||||    
T  4366 aacacgttttctcatgtttggccactctgtttgacgtagctttta 4322  T

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