View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2557_low_33 (Length: 325)
Name: NF2557_low_33
Description: NF2557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2557_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 13 - 306
Target Start/End: Original strand, 41784006 - 41784299
Alignment:
| Q |
13 |
gtaacaaagggagctcagaagggtcatctctggattcatctccaccagctacaccttgttggaagacaaaaacctacgctaatgtggttaaagggattca |
112 |
Q |
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| T |
41784006 |
gtaaccaagggagctcagaagggtcatctctggattcatctccaccagctacaccttgttggaagacaaaaacctacgctaatgtggttaaagggattca |
41784105 |
T |
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| Q |
113 |
gaataatactatgaagcttaaagaaacagggacttctaaacagaatattcatggttctgatattcaaagtttcaagtcctgcaacgttgatagattttcc |
212 |
Q |
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| T |
41784106 |
gaataatactatgaagcgtaaagaaacagggacttctaaacagaatattcatggttctgatattcaaagtttcaagtcctgcaacgttgatagattttca |
41784205 |
T |
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| Q |
213 |
tcacacaaagcattgattgaggaacaaattaaagccattgaattaaggaaaaaacattacatcagtgacatcaagcaacatgctctgtctccga |
306 |
Q |
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| T |
41784206 |
tcacacaaagcattgattgaggaacaaattaaagccattgaattaaggaaaaaacattacatcagtgacatcaagcaacatgctctgtctccga |
41784299 |
T |
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