View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2557_low_46 (Length: 239)
Name: NF2557_low_46
Description: NF2557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2557_low_46 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 29956675 - 29956895
Alignment:
| Q |
1 |
tccttgtcgaatcagcaaacctatctgacatgcctttgctcttatcaccatccaatgaagaagaacttgtctcaactgctgctaccaaattgcctgagtt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29956675 |
tccttgtcgaatcagcaaacctatctgacatgcctttgctcttatcaccatccaatgaagaagaacttgtctcaactgctgctaccaaattgcctgagtt |
29956774 |
T |
|
| Q |
101 |
taccactagtccccattccgcagctctctcggctatacttgcttcggttagaatttgatcattatcaccagaaggagcctttgttgatgttgagttttca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29956775 |
taccactagtccccattccgcagctctctcggctatacttgcttcggttagaatttgatcattatcaccagaaggagcctttgttgatgttgagttttca |
29956874 |
T |
|
| Q |
201 |
tctggtttgttagcaaatgcc |
221 |
Q |
| |
|
||||||||||||||||||||| |
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|
| T |
29956875 |
tctggtttgttagcaaatgcc |
29956895 |
T |
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