View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2557_low_49 (Length: 238)
Name: NF2557_low_49
Description: NF2557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2557_low_49 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 11984828 - 11984607
Alignment:
| Q |
1 |
tataacaaaatataataaatagttcttatggtatataaaattcatcaatttagtgtcgaaatcatatgaaaaattcttcaatttaatcttgaacatcttt |
100 |
Q |
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| T |
11984828 |
tataacaaaatataataaatagttcttatggtatataaaattcatcaatttagtgtcgaaatcatatgaaaaattcttcaatttaatcttgaacatctta |
11984729 |
T |
|
| Q |
101 |
ataacacatcataattatatagtttaagaactatatagagagggtaacattttaaggactaaattgatagtttcttgtaacaaattaactagtatcaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
11984728 |
ataacacatcataattatatagtttaagaactatatagagagggtaacattttaaggactaaattgatagtttcttttaacaaattaactagtatcaaac |
11984629 |
T |
|
| Q |
201 |
catttgggttgaatttgtttgc |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
11984628 |
catttgggttgaatttgtttgc |
11984607 |
T |
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