View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2558_high_6 (Length: 377)
Name: NF2558_high_6
Description: NF2558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2558_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 361
Target Start/End: Original strand, 7088304 - 7088664
Alignment:
| Q |
1 |
attctctaacaataactctttcaagttatgtaatgatgaaattccattaaccaagtttccagataaagcattgtttgatagatccaagcttctaagccta |
100 |
Q |
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| T |
7088304 |
attctctaacaataactctttcaagttatgtaatgatgaaattccattaaccaagtttccagataaagcattgtttgatagatccaagcttctaagccta |
7088403 |
T |
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| Q |
101 |
ttcaatgaccaaacactagaaaaatcaacattaccactaaaatgattatttgaaagatcaacactattcaacaaagaacattttgaaagtgcggtaggaa |
200 |
Q |
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| T |
7088404 |
ttcaatgaccaaaccctagaaaaatcaacattaccactaaaatgattatttgaaagatcaacactattcaacaaagaacattttgaaagtgtggtaggaa |
7088503 |
T |
|
| Q |
201 |
tttgtccttcaaataagttcatagataaagagacgcgacgaagggagaaacaattctcaaagaaactatcaggcatttgtcccgtgaatgaattatgcga |
300 |
Q |
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| T |
7088504 |
tttgtccttcaaataagttcatagataaagagacgcgacgaagggagaaacaattctcgaagaaaccatcaggcatttgtcccgcgaacgaattatgcga |
7088603 |
T |
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| Q |
301 |
gagatcgatgaaccttattgaactaatgttgacaaaagaaagaggtaatggaccagaaaat |
361 |
Q |
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|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
7088604 |
gagatcaatgaaccttattgaactcatgttgacaaaagaaagaggtaatggaccagaaaat |
7088664 |
T |
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