View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2558_low_22 (Length: 223)
Name: NF2558_low_22
Description: NF2558
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2558_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 12870186 - 12870375
Alignment:
| Q |
16 |
atcaaactcaattacaccataacaaagaagatgaagaagaacacaacaacatagaacaaagtagtagcaaatccccttctccaccactccattcactctc |
115 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
12870186 |
atcaaactcaattacaccataacgaagaagatgaagaagaacacaacaacatagaacaaagtagtagcaaatccccttcaccaccactccattcactctc |
12870285 |
T |
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| Q |
116 |
cgactcaccaatctccgacgatcaccgctccctccctctagtcctcgtgcaaccgccgttggtcacggctcaccggtttcaggttgagcc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12870286 |
cgactcaccaatctccgacgatcaccgctccctccctctagtcctcgtgcaaccgccgttggtcacggctcaccggtttcaggttgagcc |
12870375 |
T |
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