View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2559_high_6 (Length: 345)

Name: NF2559_high_6
Description: NF2559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2559_high_6
NF2559_high_6
[»] chr1 (45 HSPs)
chr1 (30-326)||(47071072-47071368)
chr1 (6-198)||(1085545-1085736)
chr1 (1-241)||(33643261-33643499)
chr1 (6-245)||(525110-525346)
chr1 (11-204)||(40709341-40709532)
chr1 (54-202)||(2506584-2506732)
chr1 (8-215)||(35927814-35928018)
chr1 (60-244)||(1344600-1344783)
chr1 (60-204)||(25268315-25268459)
chr1 (20-204)||(51303433-51303613)
chr1 (60-204)||(52707696-52707840)
chr1 (54-164)||(50079473-50079583)
chr1 (121-204)||(35512909-35512992)
chr1 (101-204)||(13386968-13387071)
chr1 (5-202)||(20607220-20607408)
chr1 (60-198)||(40287311-40287451)
chr1 (5-147)||(30010329-30010470)
chr1 (8-214)||(41498404-41498609)
chr1 (15-134)||(2859051-2859169)
chr1 (8-98)||(51303384-51303473)
chr1 (16-105)||(23536836-23536924)
chr1 (82-127)||(33673311-33673356)
chr1 (102-166)||(17622630-17622694)
chr1 (86-150)||(27739129-27739192)
chr1 (6-204)||(8529807-8529994)
chr1 (8-147)||(12234010-12234148)
chr1 (5-39)||(26941046-26941080)
chr1 (91-161)||(44210997-44211067)
chr1 (90-196)||(49946645-49946751)
chr1 (8-49)||(26324014-26324054)
chr1 (6-147)||(35349568-35349708)
chr1 (11-204)||(38509943-38510135)
chr1 (8-147)||(40095039-40095178)
chr1 (12-144)||(51597672-51597803)
chr1 (209-248)||(20607427-20607466)
chr1 (4-39)||(40094929-40094964)
chr1 (6-49)||(41498608-41498651)
chr1 (90-196)||(36285631-36285737)
chr1 (8-41)||(1085489-1085522)
chr1 (6-39)||(2470728-2470761)
chr1 (8-49)||(20607421-20607461)
chr1 (182-243)||(26941016-26941077)
chr1 (6-39)||(38509892-38509925)
chr1 (5-49)||(20576130-20576173)
chr1 (86-150)||(42742413-42742476)
[»] chr4 (61 HSPs)
chr4 (10-245)||(55080581-55080815)
chr4 (6-240)||(22186717-22186950)
chr4 (6-253)||(17182483-17182731)
chr4 (8-167)||(56135749-56135904)
chr4 (60-243)||(43961461-43961644)
chr4 (8-197)||(7977552-7977741)
chr4 (4-204)||(54576376-54576577)
chr4 (10-204)||(47846104-47846298)
chr4 (8-203)||(37761465-37761658)
chr4 (8-202)||(29993822-29994015)
chr4 (6-202)||(4437476-4437660)
chr4 (60-204)||(34995102-34995244)
chr4 (8-197)||(51329796-51329983)
chr4 (112-250)||(11089619-11089760)
chr4 (57-189)||(9030263-9030396)
chr4 (70-204)||(54001155-54001287)
chr4 (6-209)||(5824899-5825096)
chr4 (94-202)||(14539357-14539465)
chr4 (5-246)||(47433715-47433956)
chr4 (81-196)||(55510242-55510356)
chr4 (8-147)||(37711138-37711281)
chr4 (5-237)||(46007715-46007948)
chr4 (8-144)||(54935067-54935204)
chr4 (6-147)||(26166935-26167075)
chr4 (8-147)||(1968465-1968603)
chr4 (12-147)||(27735749-27735883)
chr4 (129-180)||(51075217-51075268)
chr4 (102-204)||(21694939-21695040)
chr4 (149-245)||(35543315-35543411)
chr4 (120-246)||(44145842-44145968)
chr4 (10-147)||(47846369-47846505)
chr4 (11-147)||(5730936-5731072)
chr4 (8-204)||(31348370-31348565)
chr4 (6-245)||(45741888-45742136)
chr4 (6-49)||(49735696-49735738)
chr4 (6-49)||(54320638-54320680)
chr4 (3-78)||(54935244-54935318)
chr4 (8-78)||(49735468-49735537)
chr4 (101-202)||(17938158-17938259)
chr4 (6-39)||(41174354-41174387)
chr4 (10-98)||(27735900-27735987)
chr4 (6-49)||(37711327-37711369)
chr4 (4-79)||(44145769-44145843)
chr4 (5-39)||(27775580-27775614)
chr4 (65-147)||(35248742-35248824)
chr4 (8-38)||(54320435-54320465)
chr4 (208-245)||(24565344-24565381)
chr4 (8-77)||(29798288-29798356)
chr4 (90-147)||(36151657-36151714)
chr4 (209-254)||(37711333-37711378)
chr4 (8-49)||(41174549-41174589)
chr4 (209-246)||(53260715-53260752)
chr4 (8-49)||(53260718-53260758)
chr4 (186-243)||(56135908-56135965)
chr4 (6-39)||(56135934-56135967)
chr4 (6-38)||(5730828-5730860)
chr4 (6-38)||(22920979-22921011)
chr4 (6-38)||(22970788-22970820)
chr4 (209-249)||(37711132-37711172)
chr4 (209-245)||(41174555-41174591)
chr4 (118-150)||(47694458-47694490)
[»] chr8 (45 HSPs)
chr8 (9-177)||(43826333-43826500)
chr8 (3-204)||(12022192-12022392)
chr8 (8-204)||(8815190-8815385)
chr8 (5-196)||(16024150-16024341)
chr8 (6-203)||(30365128-30365324)
chr8 (8-204)||(43732679-43732882)
chr8 (8-243)||(9933240-9933475)
chr8 (11-204)||(20472741-20472933)
chr8 (8-195)||(40633047-40633232)
chr8 (6-196)||(8671849-8672040)
chr8 (8-189)||(9434362-9434543)
chr8 (60-179)||(39449355-39449474)
chr8 (65-203)||(6453239-6453378)
chr8 (121-204)||(29937614-29937697)
chr8 (109-196)||(34196409-34196496)
chr8 (8-239)||(1026863-1027092)
chr8 (12-98)||(7394616-7394701)
chr8 (8-246)||(9718486-9718723)
chr8 (102-248)||(29358345-29358490)
chr8 (6-147)||(31543178-31543318)
chr8 (86-150)||(27487067-27487131)
chr8 (55-182)||(38021409-38021531)
chr8 (60-147)||(41103612-41103699)
chr8 (6-147)||(7979138-7979278)
chr8 (93-218)||(24243084-24243206)
chr8 (209-245)||(1027058-1027094)
chr8 (6-78)||(2248450-2248521)
chr8 (86-150)||(27483637-27483701)
chr8 (102-201)||(31738516-31738615)
chr8 (6-78)||(43732862-43732933)
chr8 (4-39)||(8815137-8815172)
chr8 (94-161)||(38198141-38198208)
chr8 (4-50)||(2481976-2482021)
chr8 (1-39)||(3726856-3726894)
chr8 (4-38)||(11785740-11785774)
chr8 (118-160)||(22591501-22591543)
chr8 (6-36)||(37032596-37032626)
chr8 (8-37)||(6315066-6315095)
chr8 (8-41)||(16652958-16652991)
chr8 (108-149)||(30581914-30581955)
chr8 (6-39)||(31738636-31738669)
chr8 (208-245)||(41103502-41103539)
chr8 (8-48)||(4247725-4247764)
chr8 (95-147)||(26167842-26167894)
chr8 (3-35)||(33922520-33922552)
[»] chr5 (45 HSPs)
chr5 (8-243)||(40305670-40305909)
chr5 (10-204)||(34980812-34981005)
chr5 (8-204)||(10204576-10204771)
chr5 (8-204)||(33744242-33744437)
chr5 (6-206)||(21580945-21581145)
chr5 (8-204)||(10043252-10043447)
chr5 (8-202)||(15986675-15986868)
chr5 (10-183)||(8551488-8551660)
chr5 (54-168)||(5688458-5688572)
chr5 (56-204)||(6597839-6597979)
chr5 (101-204)||(6382419-6382522)
chr5 (101-202)||(12035987-12036087)
chr5 (6-147)||(16938477-16938617)
chr5 (108-204)||(10043058-10043154)
chr5 (1-147)||(11756871-11757015)
chr5 (8-204)||(13634711-13634906)
chr5 (4-49)||(14245250-14245294)
chr5 (3-111)||(15858882-15858989)
chr5 (4-39)||(5688603-5688638)
chr5 (8-147)||(7544136-7544274)
chr5 (8-147)||(26414893-26415031)
chr5 (90-204)||(28279525-28279640)
chr5 (8-98)||(14245088-14245177)
chr5 (6-147)||(4373672-4373812)
chr5 (6-79)||(10476202-10476274)
chr5 (8-49)||(20147074-20147114)
chr5 (5-50)||(40305667-40305711)
chr5 (90-175)||(42681534-42681619)
chr5 (9-49)||(13634915-13634954)
chr5 (3-39)||(22023572-22023608)
chr5 (8-39)||(9856890-9856921)
chr5 (10-103)||(1657963-1658055)
chr5 (12-49)||(2550556-2550592)
chr5 (4-49)||(15986620-15986664)
chr5 (10-39)||(22022849-22022878)
chr5 (182-243)||(22023542-22023603)
chr5 (138-194)||(2183943-2183999)
chr5 (209-245)||(7544134-7544170)
chr5 (4-32)||(8503049-8503077)
chr5 (5-37)||(13298477-13298509)
chr5 (11-39)||(14681473-14681501)
chr5 (7-39)||(14684697-14684729)
chr5 (10-38)||(16502006-16502034)
chr5 (5-49)||(26415097-26415141)
chr5 (171-239)||(29002220-29002288)
[»] chr7 (53 HSPs)
chr7 (8-202)||(36267604-36267797)
chr7 (8-202)||(37925841-37926034)
chr7 (8-204)||(33519048-33519243)
chr7 (6-239)||(39646467-39646699)
chr7 (25-249)||(48013520-48013743)
chr7 (58-204)||(35422013-35422159)
chr7 (6-204)||(28074152-28074354)
chr7 (11-240)||(21857350-21857577)
chr7 (5-203)||(37620771-37620968)
chr7 (8-204)||(48881607-48881793)
chr7 (11-204)||(31364094-31364285)
chr7 (65-179)||(3215934-3216048)
chr7 (81-204)||(48015278-48015402)
chr7 (6-183)||(8122142-8122322)
chr7 (60-200)||(3143531-3143675)
chr7 (60-161)||(12670928-12671029)
chr7 (93-204)||(2087788-2087903)
chr7 (93-243)||(48093977-48094127)
chr7 (93-243)||(23116269-23116420)
chr7 (6-204)||(33655157-33655354)
chr7 (93-181)||(16833779-16833867)
chr7 (8-143)||(39855975-39856109)
chr7 (9-132)||(12682850-12682972)
chr7 (8-146)||(1051605-1051742)
chr7 (4-151)||(18795697-18795842)
chr7 (118-204)||(30592302-30592388)
chr7 (10-219)||(24970199-24970407)
chr7 (6-47)||(26365765-26365806)
chr7 (6-245)||(17852879-17853106)
chr7 (86-184)||(7791796-7791894)
chr7 (93-147)||(18063667-18063721)
chr7 (6-144)||(25887190-25887327)
chr7 (3-49)||(36267548-36267593)
chr7 (1-39)||(37417836-37417874)
chr7 (38-147)||(41497063-41497172)
chr7 (6-202)||(47390853-47391049)
chr7 (5-49)||(33519252-33519295)
chr7 (5-49)||(41496954-41496997)
chr7 (6-78)||(48881556-48881627)
chr7 (6-49)||(13770946-13770988)
chr7 (8-115)||(13771084-13771190)
chr7 (4-39)||(40282193-40282228)
chr7 (89-147)||(22163215-22163273)
chr7 (89-147)||(22221923-22221981)
chr7 (9-39)||(31571683-31571713)
chr7 (8-49)||(28074103-28074143)
chr7 (94-146)||(37417740-37417793)
chr7 (6-35)||(38749576-38749605)
chr7 (185-246)||(48881735-48881796)
chr7 (1-49)||(18231790-18231837)
chr7 (181-245)||(37417805-37417869)
chr7 (11-39)||(42306543-42306571)
chr7 (210-246)||(48152191-48152227)
[»] chr3 (46 HSPs)
chr3 (60-242)||(40858616-40858798)
chr3 (3-209)||(24253716-24253922)
chr3 (12-204)||(17474255-17474446)
chr3 (6-204)||(34641000-34641185)
chr3 (8-243)||(41414078-41414313)
chr3 (13-204)||(26135807-26135992)
chr3 (60-243)||(48683663-48683848)
chr3 (14-212)||(10943655-10943852)
chr3 (8-204)||(44412361-44412556)
chr3 (100-243)||(42772123-42772266)
chr3 (11-195)||(21090129-21090312)
chr3 (70-196)||(42699669-42699795)
chr3 (20-204)||(18086029-18086218)
chr3 (54-176)||(46978472-46978594)
chr3 (14-178)||(16884047-16884209)
chr3 (54-189)||(8432323-8432458)
chr3 (81-195)||(36727249-36727362)
chr3 (60-168)||(27197734-27197842)
chr3 (1-204)||(24560210-24560412)
chr3 (14-202)||(54985744-54985943)
chr3 (122-214)||(55428492-55428584)
chr3 (8-243)||(21773782-21774016)
chr3 (6-246)||(220405-220643)
chr3 (6-246)||(37102156-37102385)
chr3 (11-147)||(18654706-18654842)
chr3 (8-204)||(41110370-41110565)
chr3 (59-187)||(45663211-45663337)
chr3 (8-243)||(30200098-30200339)
chr3 (181-243)||(37102321-37102383)
chr3 (8-41)||(651740-651773)
chr3 (6-147)||(28582615-28582755)
chr3 (3-39)||(30200093-30200129)
chr3 (10-98)||(44412516-44412603)
chr3 (4-39)||(24560430-24560465)
chr3 (4-35)||(54574573-54574604)
chr3 (1-39)||(42699815-42699853)
chr3 (6-140)||(46204884-46205017)
chr3 (8-49)||(34641194-34641234)
chr3 (6-39)||(48683817-48683850)
chr3 (12-49)||(55428583-55428619)
chr3 (6-38)||(5961982-5962014)
chr3 (6-38)||(18654598-18654630)
chr3 (209-245)||(24560215-24560251)
chr3 (11-147)||(27542037-27542172)
chr3 (209-245)||(34641200-34641236)
chr3 (3-39)||(42772235-42772271)
[»] chr2 (48 HSPs)
chr2 (8-204)||(45257307-45257502)
chr2 (6-204)||(42296352-42296549)
chr2 (8-214)||(31061359-31061565)
chr2 (9-214)||(1052793-1053000)
chr2 (16-240)||(33265615-33265838)
chr2 (8-189)||(34187575-34187757)
chr2 (60-202)||(15085751-15085894)
chr2 (10-199)||(3094407-3094595)
chr2 (8-180)||(2381060-2381231)
chr2 (60-203)||(35325318-35325463)
chr2 (60-195)||(45098220-45098355)
chr2 (61-202)||(21502084-21502226)
chr2 (82-235)||(36052105-36052260)
chr2 (111-201)||(8554351-8554441)
chr2 (15-176)||(31928121-31928286)
chr2 (115-245)||(42813726-42813866)
chr2 (8-204)||(15224743-15224938)
chr2 (55-150)||(22356011-22356106)
chr2 (10-147)||(16713494-16713630)
chr2 (6-246)||(36347538-36347787)
chr2 (8-136)||(1270394-1270522)
chr2 (108-204)||(9313082-9313182)
chr2 (90-242)||(39821750-39821902)
chr2 (5-127)||(17333937-17334059)
chr2 (90-204)||(31795818-31795932)
chr2 (8-142)||(41778773-41778906)
chr2 (1-78)||(22356179-22356255)
chr2 (134-202)||(16713650-16713718)
chr2 (140-202)||(22356134-22356197)
chr2 (61-127)||(23739882-23739948)
chr2 (4-49)||(17379842-17379886)
chr2 (6-49)||(35736173-35736215)
chr2 (3-38)||(40022358-40022393)
chr2 (13-147)||(8426977-8427110)
chr2 (171-243)||(1583239-1583311)
chr2 (81-144)||(886988-887051)
chr2 (8-39)||(17380054-17380085)
chr2 (90-147)||(37739997-37740055)
chr2 (8-98)||(42813775-42813864)
chr2 (10-147)||(2241413-2241548)
chr2 (4-49)||(2380988-2381033)
chr2 (5-38)||(9427200-9427233)
chr2 (6-39)||(23748103-23748136)
chr2 (8-49)||(23748299-23748339)
chr2 (209-246)||(23748305-23748342)
chr2 (11-39)||(12541773-12541801)
chr2 (209-245)||(15224904-15224940)
chr2 (11-39)||(36567065-36567093)
[»] chr6 (36 HSPs)
chr6 (6-189)||(15323223-15323405)
chr6 (6-189)||(15353362-15353543)
chr6 (8-204)||(9051583-9051776)
chr6 (54-214)||(26318350-26318510)
chr6 (4-204)||(31798914-31799116)
chr6 (90-204)||(25468448-25468562)
chr6 (8-204)||(4097284-4097480)
chr6 (81-245)||(3841156-3841332)
chr6 (6-204)||(10293248-10293443)
chr6 (8-132)||(23090995-23091118)
chr6 (6-147)||(4097618-4097759)
chr6 (113-184)||(15373668-15373739)
chr6 (11-248)||(30849919-30850153)
chr6 (113-214)||(34176610-34176711)
chr6 (8-96)||(10818229-10818316)
chr6 (108-202)||(29692977-29693079)
chr6 (108-202)||(28477079-28477182)
chr6 (6-245)||(21606852-21607090)
chr6 (81-127)||(382980-383026)
chr6 (4-245)||(31849106-31849346)
chr6 (8-147)||(14515473-14515609)
chr6 (4-39)||(1300625-1300660)
chr6 (8-214)||(16738035-16738239)
chr6 (1-39)||(14515684-14515722)
chr6 (60-112)||(34177040-34177093)
chr6 (11-147)||(19278144-19278278)
chr6 (11-147)||(30487411-30487546)
chr6 (8-39)||(4097235-4097266)
chr6 (11-49)||(9719034-9719071)
chr6 (8-78)||(9721138-9721207)
chr6 (118-204)||(10818325-10818411)
chr6 (5-35)||(12811197-12811227)
chr6 (101-147)||(32926737-32926783)
chr6 (60-97)||(15373733-15373770)
chr6 (209-246)||(30487303-30487340)
chr6 (8-49)||(30487306-30487346)
[»] scaffold0119 (2 HSPs)
scaffold0119 (8-203)||(37383-37577)
scaffold0119 (8-136)||(30715-30843)
[»] scaffold0026 (2 HSPs)
scaffold0026 (8-204)||(1446-1642)
scaffold0026 (11-39)||(1175-1203)
[»] scaffold0071 (3 HSPs)
scaffold0071 (60-246)||(52937-53120)
scaffold0071 (164-243)||(52896-52975)
scaffold0071 (6-35)||(52894-52923)
[»] scaffold0095 (1 HSPs)
scaffold0095 (60-179)||(8198-8317)
[»] scaffold0007 (1 HSPs)
scaffold0007 (72-204)||(242275-242411)
[»] scaffold0012 (1 HSPs)
scaffold0012 (5-218)||(184608-184816)
[»] scaffold1414 (1 HSPs)
scaffold1414 (64-180)||(355-473)
[»] scaffold0240 (1 HSPs)
scaffold0240 (109-204)||(17640-17735)
[»] scaffold0067 (2 HSPs)
scaffold0067 (8-204)||(39236-39434)
scaffold0067 (6-39)||(39184-39217)
[»] scaffold0018 (1 HSPs)
scaffold0018 (86-187)||(69272-69374)
[»] scaffold0294 (1 HSPs)
scaffold0294 (209-241)||(15472-15504)
[»] scaffold0006 (1 HSPs)
scaffold0006 (118-166)||(81498-81546)


Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 30 - 326
Target Start/End: Original strand, 47071072 - 47071368
Alignment:
Q  30 ttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtatttt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47071072 ttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaaatatttt 47071171  T
Q  130 atgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttca 229  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  47071172 atgatcatttatcatgttgttaattaaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagttagtcttcccttcctaaacccttca 47071271  T
Q  230 tccaaacacacccttaaagaatttgaaaaaagcaaaatgaatttgcataccgagatggatggactagaatgaagtgagtaaatttgatgatgatgtc 326  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47071272 tccaaacacacccttaaagaatttgaaaaaagcaaaatggacttgcataccgagatggatggagtagaatgaagtgagtaaatttgatgatgatgtc 47071368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 6 - 198
Target Start/End: Complemental strand, 1085736 - 1085545
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||||||||||| |||||||||||||||| ||||||||  ||   ||| ||||||||| |||||||||| | |||||||||||||||| ||||||    
T  1085736 ttagggtgtgtttggatagagggtttaggagggg-aagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaata 1085638  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaag 198  Q
    | |||||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||||| ||||| ||||||||||||| ||||||||    
T  1085637 aattaagtgtttttgaagtattatatgatcatttatcatgctgttagttcaattttctaaaaatcattttctaatgtccgtaatttaaaaaag 1085545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 33643261 - 33643499
Alignment:
Q  1 ttttcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttca 100  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||| || ||   ||| ||||||||| ||||||||||  ||||||||||||||||| |    
T  33643261 ttttcttagggtgtgtttagattgaaggtttaggagggg-aagggaagggatgactcacttttattttttaaattacgaaaaatgtaaaatgttttttta 33643359  T
Q  101 aaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    |||||| |||||||||||||||||||| |||||||||| ||||| || |||||| |||||||||||||| |||||| ||||| | |||| |||||||| |    
T  33643360 aaataaattaagtgtttttgaagtattatatgatcattcatcatattattaattcaattttctaaaaatcattttaaaatgttcataatttaaaaaag-a 33643458  T
Q  201 aagttaatcttcccttcctaaacccttcatccaaacacacc 241  Q
    || | |||  |||| |||||||||||  |||||||||||||    
T  33643459 aattaaattctcccctcctaaaccctctatccaaacacacc 33643499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 6 - 245
Target Start/End: Complemental strand, 525346 - 525110
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttc-aaaat 104  Q
    |||||||||||||||||||||||||||||| ||| |||||| || |  ||||| ||||| ||| |||||||| | ||| ||||||||||||||  |||||    
T  525346 ttagggtgtgtttggattgagggtttaggacggg-aagggaaggaagagttcacttttaatttttaaattacaaacaacgtaaaatgttttttttaaaat 525248  T
Q  105 aagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    || |||||| | ||||||||||| ||| |||||||||||| ||||||||| || ||||||||||||||||||| ||||||||||| |||||||||||||     
T  525247 aaattaagtttgtttgaagtattatataatcatttatcatattgttaattcaa-tttctaaaaattattttat-atgtccgtaatttaaaaaagaaaag- 525151  T
Q  205 taatcttcccttcctaaacccttcatccaaacacaccctta 245  Q
    ||||| |||| ||||||| || ||||||||||||| |||||    
T  525150 taatcctcccctcctaaatccatcatccaaacacatcctta 525110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 40709532 - 40709341
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtta 110  Q
    ||||||||||||||||| ||||||||||| || |||||| |  || || ||||||||| ||||||| || |||||||||| ||||||| |||| || |||    
T  40709532 gtgtgtttggattgaggatttaggagggg-aacggaggggagggt-cacttttattttttaaattatgaacaatgtaaaaggttttttaaaaagaaatta 40709435  T
Q  111 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  40709434 agtgtttttgaagtattatatgatcatttatcatatcgttaatttaattttctaaaaattattttataatattcgtaatttaaaaaagaaaagt 40709341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 2506584 - 2506732
Alignment:
Q  54 gttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaat 153  Q
    |||||||||||| || |||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || ||||||||    
T  2506584 gttcatttttatcttttaaattacgaccaatataaaatgttttttcaaaataaattaagtgtttttgaagtattatatgatcatttattatattgttaat 2506683  T
Q  154 taaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
    |  ||||| |||||||||||||||||| || ||||| ||||||||||||    
T  2506684 tcgattttttaaaaattattttataatatctgtaatttaaaaaagaaaa 2506732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 215
Target Start/End: Original strand, 35927814 - 35928018
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||| ||||||||||| || |||||| |  | |||  |||||||| ||||||| || ||||||||| | |||||  |||||||     
T  35927814 agggtgtgtttggattgaggttttaggagggg-aatggaggggagggctcacatttattttttaaattatgaacaatgtaaa-tatttttctaaaataaa 35927911  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaa 207  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||  || ||||| |||||||||||||| ||    
T  35927912 ttaagtatttttgaagtattatatgatcatttatcatgttgttaattcaattttct-aaaattattttataaaatctgtaatttaaaaaagaaaagtaaa 35928010  T
Q  208 tcttccct 215  Q
    || |||||    
T  35928011 tcatccct 35928018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 60 - 244
Target Start/End: Original strand, 1344600 - 1344783
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| |||||||| | ||||| |||||||||||| |||| || |||||||||||||| ||| | |||| | |||||||||||||||  || ||||    
T  1344600 ttttattttttaaattacaaacaatgcaaaatgttttttaaaaaaaa-ttaagtgtttttgatgtaatatatgtttatttatcatgttgttggttcaatt 1344698  T
Q  160 ttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccctt 244  Q
    |||||||||| |||||| |||||||||||| |||||||||||| | ||| ||||| ||||||||||| |||||||||||| ||||    
T  1344699 ttctaaaaatcattttacaatgtccgtaatttaaaaaagaaaaataaattttcccctcctaaaccctccatccaaacacatcctt 1344783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 60 - 204
Target Start/End: Original strand, 25268315 - 25268459
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    |||||| || ||||||  || ||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||| |||||| ||||||||    
T  25268315 ttttatattttaaattttgaacaatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcacgttgttgattaaatt 25268414  T
Q  160 ttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||| |||||||||| |||||||| |||||||| |||||    
T  25268415 ttctaaaaatcattttataatttccgtaatttaaaaaaggaaagt 25268459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 51303613 - 51303433
Alignment:
Q  20 gattgagggtttaggagggggaagggagggcattgttca-tttttattttgtaaattacgagcaatgtaaaa-tgttttttcaaaataagttaagtgttt 117  Q
    ||||||||||||||||  |||||||||||||     ||| |||||||||| |||||||||| ||||||||||   |||||| ||||||| ||||||||||    
T  51303613 gattgagggtttagga-agggaagggagggc-----tcattttttattttttaaattacgaacaatgtaaaacattttttttaaaataaattaagtgttt 51303520  T
Q  118 ttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||| |||||||||||||||||||||||||| ||||||  |||||| |||||| | |||  ||||| ||||||| ||||||    
T  51303519 ttgaagtattatatgatcatttatcatgttgttaattcaattttaaaaaaatcattttacattgttggtaatataaaaaataaaagt 51303433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 60 - 204
Target Start/End: Original strand, 52707696 - 52707840
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| |||| ||| | |||||||||||||||||| ||||||| ||| || ||||||||||||| ||| ||||||||||||||||||| | || ||    
T  52707696 ttttattttttaaactacaaacaatgtaaaatgttttttaaaaataaattatgtatttttgaagtattatatcatcatttatcatgttgttattaaattt 52707795  T
Q  160 ttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||  ||||||||||| |||||||  ||||| ||||||||||||||    
T  52707796 ttaaaaaaattatttgataatgttggtaatttaaaaaagaaaagt 52707840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 164
Target Start/End: Complemental strand, 50079583 - 50079473
Alignment:
Q  54 gttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaat 153  Q
    |||| |||||||| | |||| ||||| |||| ||||||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||| |||||| |    
T  50079583 gttcctttttattatttaaagtacgaacaatataaaatgtttttttaaaataaattaagtgtttttaaagtattatatgatcatttatcatattgttagt 50079484  T
Q  154 taaattttcta 164  Q
    |||||||||||    
T  50079483 taaattttcta 50079473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 35512909 - 35512992
Alignment:
Q  121 aagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||| ||||||    
T  35512909 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataatttaaaaaataaaagt 35512992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 13387071 - 13386968
Alignment:
Q  101 aaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    |||||| ||||||||||||   ||||| |||||||||||||||||||||||||| ||||||||||||||  |||||| |||||| ||||  |||||||||    
T  13387071 aaataaattaagtgttttttgtgtattatatgatcatttatcatgttgttaattcaattttctaaaaatcgttttatgatgtccataattaaaaaaagaa 13386972  T
Q  201 aagt 204  Q
    ||||    
T  13386971 aagt 13386968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 5 - 202
Target Start/End: Original strand, 20607220 - 20607408
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaa---tgttttttcaa 101  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||     ||| ||||||||| |||||||    |||||||||    | ||||||  |    
T  20607220 cttagggtgtgtttgaattgagggtttaggagggg-aagggagggc-----tcacttttattttttaaattata--caatgtaaatgtttttttttttta 20607311  T
Q  102 aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaa 201  Q
    ||||| |||||||||||||||||||| |||||| || |||||   |||||||| ||||||| |||||| |||||||||||||| |||| ||||||| |||    
T  20607312 aataaattaagtgtttttgaagtattatatgataatatatca---tgttaatttaattttcaaaaaatcattttataatgtccataat-taaaaaaaaaa 20607407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 40287451 - 40287311
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgt---tttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaa 156  Q
    ||||||||| |||| ||||| | ||||||||| |   |||||  |||||| |||||||||||||||||||| ||| ||||||||| || ||||||||| |    
T  40287451 ttttattttttaaactacgaactatgtaaaatatatatttttttaaataaattaagtgtttttgaagtattatataatcatttatgattttgttaattca 40287352  T
Q  157 attttctaaaaattattttataatgtccgtaatctaaaaaag 198  Q
    ||||||||||| | |||| | ||||||| |||| ||||||||    
T  40287351 attttctaaaactcatttcacaatgtcc-taatttaaaaaag 40287311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 30010329 - 30010470
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaat 104  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |   || | |||| || | |||||||||  | || ||| ||||||||  |||||    
T  30010329 cttagggtgtgtttggattgagggtttagga-ggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaat 30010427  T
Q  105 aagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    || ||||||||  |||||||||| ||||||| ||||| |||||    
T  30010428 aaattaagtgtggttgaagtattatatgatcgtttataatgtt 30010470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 41498404 - 41498609
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||| ||||||| ||||| |  ||| | ||||  ||| ||||||| || | || ||| ||| ||||  |  |||||    
T  41498404 agggtgtgtttggattgagggtttagga-ggggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataag 41498502  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaa 207  Q
    ||||||||  |||||||||| ||||||| |||||||||||  ||  | || ||| || |||  |||| ||| |||||||||| |||||| ||||||| ||    
T  41498503 ttaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaa 41498602  T
Q  208 tcttccc 214  Q
    || ||||    
T  41498603 tcctccc 41498609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 2859169 - 2859051
Alignment:
Q  15 gtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtg 114  Q
    ||||||||||| ||||||||||||| ||||||||| |  ||| | ||||||||| |||||||||  | || ||| ||||||||  ||||||| |||||||    
T  2859169 gtttggattgaaggtttaggagggg-aagggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtg 2859071  T
Q  115 tttttgaagtattttatgat 134  Q
    |  |||||||||| ||||||    
T  2859070 tgattgaagtattatatgat 2859051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 51303384 - 51303473
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgtttttt 98  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |  | ||| ||||||||| || ||||| | |||||||||||| |||||    
T  51303384 agggtgtgtttggattgagggtttagga-ggggaggggaggggagggctcacttttattttttatattaccaacaatgtaaaatgattttt 51303473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 23536924 - 23536836
Alignment:
Q  16 tttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||| |||| |||||| ||||||||| |  | ||||||||||||| ||||| | || |||||||||||||||||| ||||||    
T  23536924 tttggattgaggatttatgagggg-aagggaggggagggctcatttttattttttaaataatgatcaatgtaaaatgtttttttaaaata 23536836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 127
Target Start/End: Original strand, 33673311 - 33673356
Alignment:
Q  82 aatgtaaaatgttttttcaaaataagttaagtgtttttgaagtatt 127  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||    
T  33673311 aatgtaaaatatttttttaaaataagttaagtgtttttgaagtatt 33673356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 17622630 - 17622694
Alignment:
Q  102 aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaa 166  Q
    ||||| ||||||||||| |||||||| |||||||| |||||||||| |||||| |||||| ||||    
T  17622630 aataaattaagtgttttagaagtattatatgatcacttatcatgttattaattcaattttttaaa 17622694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 27739129 - 27739192
Alignment:
Q  86 taaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgtt 150  Q
    ||||||||||||| ||||| | ||||||||  ||||||||||| |||||||||||||||||||||    
T  27739129 taaaatgtttttt-aaaatcaattaagtgtgattgaagtatttaatgatcatttatcatgttgtt 27739192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 8529807 - 8529994
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||| |||||||||||||||||||||||||  |||         ||| | |||| |||| |||||||| | | || ||| |||||||||  |||||    
T  8529807 ttagggtgcgtttggattgagggtttaggagggg--agg---------gtttacttttcttttttaaattacaaactatataacatgttttttttaaata 8529895  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    | ||||||||  |||||||||| ||||||| |||| ||||||  ||  | || ||| |||||| ||||| ||| |||||||||| |||||| |||||||    
T  8529896 aattaagtgtgattgaagtattatatgatcgtttaccatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaagt 8529994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 12234010 - 12234148
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||| ||||||||||||| |  | | | |||| |||| |||||||||  | || ||| ||||||||  |||||||     
T  12234010 agggtgtgtttggattgagggtttagga-ggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataaa 12234108  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | ||||||  |||| ||||  ||||||||| ||| |||||    
T  12234109 tcaagtgtgattgatgtataatatgatcatatattatgtt 12234148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 26941080 - 26941046
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||||||||||||||||||    
T  26941080 cttagggtgtgtttggattgagggtttaggagggg 26941046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 44211067 - 44210997
Alignment:
Q  91 tgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatttt 161  Q
    |||||||  ||||||| ||||||||  |||||||||| ||||||| ||||||||||||||| || ||||||    
T  44211067 tgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttaatttt 44210997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 49946751 - 49946645
Alignment:
Q  90 atgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaat 189  Q
    ||||||||| ||||||| |||| |||  |||||||||| |||||| ||||||||||||  ||  | || |||  ||||| ||||||||| ||||||||||    
T  49946751 atgtttttttaaaataaattaaatgtgattgaagtattatatgataatttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaat 49946652  T
Q  190 ctaaaaa 196  Q
     ||||||    
T  49946651 ttaaaaa 49946645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 26324014 - 26324054
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  26324014 agggtgtgtttggattgagggtttagga-ggggaagggaggg 26324054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 35349708 - 35349568
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||| |||||||| || ||||||||||||| |  ||| | ||||  ||| |||||||||  | || ||| || |||||  ||||||    
T  35349708 ttagggtgtgtttggattaagggtttatga-ggggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaata 35349610  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |  |||| ||| |||||||||| ||||||  |||||||||||    
T  35349609 aactaagggttattgaagtattatatgattgtttatcatgtt 35349568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 38510135 - 38509943
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtta 110  Q
    ||||||||||||| ||||||||||| ||||||||||||| |  ||| | |||| |||| |||| ||||  | || ||| ||||||||  ||||||| | |    
T  38510135 gtgtgtttggattaagggtttagga-ggggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatca 38510037  T
Q  111 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||  |||||||||| ||| ||| |||||| ||||   |  | |||||| |||||   |||| ||| |||||||||| |||||| |||||||    
T  38510036 agtgtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagt 38509943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 40095178 - 40095039
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttc-aaaataa 106  Q
    |||||||||||||||||||||||||| |||   |||||| || |  ||| | ||||  ||| ||||||||   | || ||| |||||||||| |||||||    
T  40095178 agggtgtgtttggattgagggtttagaaggaa-aagggaaggaagggtttacttttcgtttttaaattacagactatataacatgttttttctaaaataa 40095080  T
Q  107 gttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
     ||||||||  |||||||||| ||||||| |||||||||||    
T  40095079 attaagtgtgattgaagtattatatgatcgtttatcatgtt 40095039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 51597672 - 51597803
Alignment:
Q  12 tgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaa 111  Q
    ||||||||||||||||||||| ||   ||||||||||| |  ||| | |||| |||| ||||| |||  | || ||| ||||||||| ||||||| ||||    
T  51597672 tgtgtttggattgagggtttatga-aaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaa 51597770  T
Q  112 gtgtttttgaagtattttatgatcatttatcat 144  Q
    ||||  |||||||||| ||||||  ||||||||    
T  51597771 gtgtgattgaagtattatatgattgtttatcat 51597803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 20607427 - 20607466
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacacccttaaag 248  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  20607427 cttcccctcctaaaccctccatccaaacacacccttaaag 20607466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 40094929 - 40094964
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||| ||||||||||||||||    
T  40094929 tcttagggtgtgtttggatggagggtttaggagggg 40094964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 41498651 - 41498608
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||||| ||| |||||||||||| |||||||||    
T  41498651 ttagggtgtgtttggatggagagtttaggaggggtaagggaggg 41498608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 196
Target Start/End: Complemental strand, 36285737 - 36285631
Alignment:
Q  90 atgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaat 189  Q
    ||||||||| ||||||  | ||||||  |||||||||| ||||||| |||||||||||  ||  | || ||| |||||| ||||||||| ||| ||||||    
T  36285737 atgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcgtaat 36285638  T
Q  190 ctaaaaa 196  Q
     ||||||    
T  36285637 ttaaaaa 36285631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 1085489 - 1085522
Alignment:
Q  8 agggtgtgtttggattgagggtttaggaggggga 41  Q
    ||||||||||||||| ||||||||||||||||||    
T  1085489 agggtgtgtttggatggagggtttaggaggggga 1085522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 2470728 - 2470761
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||| ||||||||||||||||    
T  2470728 ttagggtgtgtttggatggagggtttaggagggg 2470761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 20607461 - 20607421
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  20607461 agggtgtgtttggatggagggtttagga-ggggaagggaggg 20607421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 26941016 - 26941077
Alignment:
Q  182 tccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    |||||| | |||||||||||| | || |||||| |||||||||||  |||||||||||||||    
T  26941016 tccgtattttaaaaaagaaaattgaaccttcccctcctaaaccctcaatccaaacacaccct 26941077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 38509892 - 38509925
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||| ||||||||||||||||    
T  38509892 ttagggtgtgtttggatagagggtttaggagggg 38509925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 20576130 - 20576173
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||    
T  20576130 cttagagtgtgtttggatagagggtttagga-ggggaagggaggg 20576173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 42742476 - 42742413
Alignment:
Q  86 taaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgtt 150  Q
    ||||||||||||| ||||||| ||||||||  |||||||| | |||||  |||||||||||||||    
T  42742476 taaaatgtttttt-aaaataaattaagtgtgattgaagtactatatgactatttatcatgttgtt 42742413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 9e-95; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 55080581 - 55080815
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtt 109  Q
    ||||||||||||||||||||||||||| || ||| ||||  || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  55080581 ggtgtgtttggattgagggtttaggagagg-aagagaggagatggttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagtt 55080679  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| | ||    
T  55080680 aagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgttcgtaatttaaaaaagaaaagtaagtc 55080779  T
Q  210 ttcccttcctaaacccttcatccaaacacaccctta 245  Q
     |||| ||||||||||| ||||||||||||||||||    
T  55080780 ctcccatcctaaaccctccatccaaacacaccctta 55080815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 6 - 240
Target Start/End: Original strand, 22186717 - 22186950
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||  ||||| ||||| ||| |||||||| | ||| |||||||||||||| ||||||    
T  22186717 ttagggtgtatttggattgagggtttaggaaggg-aagggagggcagagttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaata 22186815  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtt 205  Q
    | | |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||     
T  22186816 aataaagtgtttttgaagtattatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagtg 22186915  T
Q  206 aatcttcccttcctaaacccttcatccaaacacac 240  Q
    | || |||| |  |||||||| |||||||||||||    
T  22186916 agtcctccccttttaaaccctccatccaaacacac 22186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 6 - 253
Target Start/End: Complemental strand, 17182731 - 17182483
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||     || | ||||||||| |||||||||| ||| ||||||| |||||| ||||||    
T  17182731 ttagggtgtgtttggattgagggtttatgaggggaaaggaagggaggactt-acttttattttttaaattacgaacaaggtaaaatatttttttaaaata 17182633  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatttt--ctaaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    | |||||||||||||||||||| |||||||||||||||| ||||||||| ||||||  | |||||| ||||||||| |||  |||| |||||||||||||    
T  17182632 aattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaatttttgcaaaaaatcattttataacgtcaataatttaaaaaagaaaag 17182533  T
Q  204 ttaatcttcccttcctaaacccttcatccaaacacacccttaaagaattt 253  Q
    | ||||||||| ||||||| |||  ||||||||||||| ||||| |||||    
T  17182532 taaatcttcccctcctaaaacctctatccaaacacacctttaaataattt 17182483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 56135749 - 56135904
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| |||||||||| |||||||||||||||||| |||||||     
T  56135749 agggtgtgtttggattgagggtttaggagggg-aagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaa 56135847  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaa 167  Q
    |||||||||||||||||||| |||||||||||||||   |||||||| ||||||||||||    
T  56135848 ttaagtgtttttgaagtattatatgatcatttatca---tgttaattcaattttctaaaa 56135904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 43961461 - 43961644
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| ||||||| || |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| ||||    
T  43961461 ttttattttttaaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgataattcaatt 43961560  T
Q  160 ttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    |||||||||| |||||||||||| | |||| |||||||||||| | |  | |||| || ||| |||| ||||||||||||||||    
T  43961561 ttctaaaaatcattttataatgttcataatttaaaaaagaaaaataagccctcccctcataatccctccatccaaacacaccct 43961644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 8 - 197
Target Start/End: Complemental strand, 7977741 - 7977552
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaa-taa 106  Q
    ||||||||||||||||||||||||| |||||| |||| |||| |  ||||| ||||||||| ||||||||||  |||||||||||||||||  ||| |||    
T  7977741 agggtgtgtttggattgagggtttatgaggggaaagg-aggggagggttcaattttattttttaaattacgaagaatgtaaaatgttttttttaaagtaa 7977643  T
Q  107 gttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaa 197  Q
     |||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||| |||||||    
T  7977642 attaattgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaatattattttataatgttcgtaatttaaaaaa 7977552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 4 - 204
Target Start/End: Complemental strand, 54576577 - 54576376
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttca--a 101  Q
    |||||||||||||||||||| |||||||| ||| || ||||||| | |  ||||| ||||| ||| |||||||||| ||| ||||||||||||||    |    
T  54576577 tcttagggtgtgtttggattaagggtttaagagagg-aagggagagaagagttcacttttaatttttaaattacgaacaacgtaaaatgtttttttttta 54576479  T
Q  102 aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaa 201  Q
    ||||| |||| ||||||||||||||| ||| ||||||||||| |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||    
T  54576478 aataaattaaatgtttttgaagtattatataatcatttatcacgttgttaattcaattttctataaatcattttataatgtccgtaatctaaaaaagaaa 54576379  T
Q  202 agt 204  Q
    |||    
T  54576378 agt 54576376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 47846298 - 47846104
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttc-aaaataagt 108  Q
    ||||||||||||||||||||||| |||| | |||||| || |  ||| | ||||||||| ||||||| || ||||||||| ||||||||  ||||||| |    
T  47846298 ggtgtgtttggattgagggtttaagaggag-aagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaataaat 47846200  T
Q  109 taagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||| |||||| ||||||||||||||||||||||  ||| ||||||||||||||    
T  47846199 taagtgtttttgaagtattatatgattatttatcatgttcttaattcaattttgtaaaaattattttataatgtccagaatttaaaaaagaaaagt 47846104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 37761465 - 37761658
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||| |||||||||| | |||| |||| |  ||||| ||||| ||| |||||||||| |||  |||||| |||||| | |||||     
T  37761465 agggtgtgtttggattgagagtttaggaggagaaagg-agggtagagttcacttttaatttttaaattacgaacaacataaaatatttttt-agaataaa 37761562  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||| |||||||||||||    
T  37761563 ttaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtccataatttaaaaaagaaaag 37761658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 29994015 - 29993822
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||| |||| |||| ||| ||||||||||  || |||||| |  ||||| ||||| ||| |||||||||| |||||||||| ||||||| ||||||      
T  29994015 agggtgagtttagattaaggatttaggaggga-aatggaggggagggttcacttttactttttaaattacgaacaatgtaaaaagtttttttaaaataga 29993917  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
    |||||| ||||||||||||| ||| |||||  ||||||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||    
T  29993916 ttaagtatttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttatagtgtccgtaatttaaaaaagaaaa 29993822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 202
Target Start/End: Complemental strand, 4437660 - 4437476
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||| |||||||||||||      ||||     |||||||||||||| |||||||  | |||||||||||||||||  ||||||    
T  4437660 ttagggtgtgtttggattgaaggtttaggagggg------aggg-----ttcatttttattttttaaattaaaaacaatgtaaaatgttttta-aaaata 4437573  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
    | | |||||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||| |||||||||| ||| |||| ||||||||||||    
T  4437572 aatcaagtgtttttgaagtattatatgatcaattatcatgttgttaattcaattttttaaaaatcattttataatatccataatttaaaaaagaaaa 4437476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 60 - 204
Target Start/End: Original strand, 34995102 - 34995244
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| |||||||||| |||||| ||||||||||  ||||||| |||||||||||||||||||| || ||| |||||||||||  |||||| ||||    
T  34995102 ttttattttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgtttttgaagtattataagattatttatcatgt--ttaattcaatt 34995199  T
Q  160 ttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||| |||| ||||| |||||||| ||||||||||||||    
T  34995200 ttctaaaaatcatttgataatatccgtaatttaaaaaagaaaagt 34995244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 8 - 197
Target Start/End: Original strand, 51329796 - 51329983
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||| |||||||||||| |||  || | |  ||||| ||||| ||| |||||||||| |||   |||||||||||| |||||||     
T  51329796 agggtgtgtttggattgagagtttaggagggg-aagaaagaggagagttcaattttaatttttaaattacgaacaacacaaaatgtttttttaaaataaa 51329894  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaa 197  Q
    |||||| ||||||||||||| ||| |||||||||||| ||||||||| ||||||||| ||||||||||||||| ||| |||| |||||||    
T  51329895 ttaagt-tttttgaagtattatataatcatttatcattttgttaattcaattttctataaattattttataatatccctaatttaaaaaa 51329983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 250
Target Start/End: Original strand, 11089619 - 11089760
Alignment:
Q  112 gtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtta---at 208  Q
    |||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||| || |   ||    
T  11089619 gtgtttttgaagtaatatatgatcatttatgatgttgttaattcaattttctaaaaaatattttataaagtccgtaatttaaaaaagaaatgtaaaccat 11089718  T
Q  209 cttcccttcctaaacccttcatccaaacacacccttaaagaa 250  Q
    |||||| | ||||| |||  ||||||||||||||||||||||    
T  11089719 cttccccttctaaatcctcaatccaaacacacccttaaagaa 11089760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 9030263 - 9030396
Alignment:
Q  57 catttttattttgtaaattacgagcaatgtaaaatgttttttcaa-aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaatta 155  Q
    |||||| | ||| |||||||||| ||| |||||||||||||| || ||||| |||||||||||| ||||||| ||| |||||||||||| || |||||||    
T  9030263 cattttaaatttttaaattacgaacaacgtaaaatgttttttaaacaataaattaagtgtttttaaagtattatataatcatttatcattttattaatta 9030362  T
Q  156 aattttctaaaaattattttataatgtccgtaat 189  Q
    |||||||||||||| ||||||||||||| |||||    
T  9030363 aattttctaaaaatcattttataatgtctgtaat 9030396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 70 - 204
Target Start/End: Complemental strand, 54001287 - 54001155
Alignment:
Q  70 taaattacgagcaatgtaaaatgttttttcaaaataagttaa-gtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaa 168  Q
    ||||| |||| ||||||||||||| |||| ||||||| | || |||||||||||||||| |||||||||||||||||||   |||| |||||| ||||||    
T  54001287 taaatcacgaacaatgtaaaatgtctttttaaaataaataaaagtgtttttgaagtattatatgatcatttatcatgtt---aattcaattttttaaaaa 54001191  T
Q  169 ttattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||||||||||||||||| ||||||| ||||||    
T  54001190 ttattttataatgtccgtaatttaaaaaacaaaagt 54001155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 5824899 - 5825096
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||||||| ||| ||| || | |||  | || ||||||||||||| ||||||||||  |||||||||||||| || ||||||    
T  5824899 ttagggtgtgtttggattgagggttttggaaggg-aatgaaggttagtgctcatttttattttttaaattacgaaaaatgtaaaatgtttgtttaaaata 5824997  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtt 205  Q
    |    | |||||  ||    || |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||  |||||||||||||     
T  5824998 a----aatgtttg-gattggttatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaattcaaaaaagaaaagta 5825092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 14539357 - 14539465
Alignment:
Q  94 tttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaa 193  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||| ||  |||||||||||| |||||| ||     
T  14539357 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttattatgttcttaatttaattttctaacaaacattttataatgttcgtaatttat 14539456  T
Q  194 aaaagaaaa 202  Q
    |||| ||||    
T  14539457 aaaaaaaaa 14539465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 246
Target Start/End: Complemental strand, 47433956 - 47433715
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatg-taaaatgttttttcaaaa 103  Q
    |||||||||||||||| |||| ||||||||||||| ||||||| | |  ||| | |||| |||| ||||||||   | ||  ||| ||||||||| ||||    
T  47433956 cttagggtgtgtttgggttgacggtttaggagggg-aagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaa 47433858  T
Q  104 taagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    ||| ||||||||  |||||||||| ||||||| ||||| ||||| ||| || |||||| ||||||  |||  ||||||||| |||| |||||| |||||     
T  47433857 taaattaagtgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaat 47433759  T
Q  204 ttaatc-ttcccttcctaaacccttcatccaaacacacccttaa 246  Q
    | || | ||||| ||||||||||| |||| |||| |||||||||    
T  47433758 taaacccttcccctcctaaaccctccatctaaacgcacccttaa 47433715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 55510242 - 55510356
Alignment:
Q  81 caatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataat 180  Q
    |||||||||||||||||| ||||||| ||||||||   ||||||||| |||||||||| |||||||||||| || |||||| | |||| ||||||||| |    
T  55510242 caatgtaaaatgtttttttaaaataaattaagtgtgactgaagtattatatgatcattcatcatgttgttatttcaatttttttaaaa-tattttatagt 55510340  T
Q  181 gtccgtaatctaaaaa 196  Q
    || |||||| ||||||    
T  55510341 gttcgtaatttaaaaa 55510356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 37711138 - 37711281
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggg----gaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaa 103  Q
    ||||||||||||||||||||||||||||||||    |||||||||| |  |||  ||||| |||| |||||||||  | || ||| |||||| |  ||||    
T  37711138 agggtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaaaa 37711237  T
Q  104 taagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||| ||||||||  |||||||||| |||||||||||||||||||    
T  37711238 taaattaagtgtgattgaagtattatatgatcatttatcatgtt 37711281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 46007948 - 46007715
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaat 104  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |  ||| | |||| |||| |||||| |   | || |||  |||||||  |||||    
T  46007948 cttagagtgtgtttggattgagggtttagga-ggggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaat 46007850  T
Q  105 aagttaagtgtttttgaagtattttatgatcatttatcatgttgtta-attaaattttctaaaaattatttt-ataatgtccgtaatctaaaaaagaaaa 202  Q
    || |||||||   |||||||||| |||||||||||||||||||  ||  |||| ||||  |||||  ||||| || ||||| ||||| |||||| |||||    
T  46007849 aaattaagtgagattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaa 46007750  T
Q  203 gttaatcttcccttcctaaacccttcatccaaaca 237  Q
    || || | |||| ||||||||||| ||||||||||    
T  46007749 gtaaaccctcccctcctaaaccctccatccaaaca 46007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 54935067 - 54935204
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggc-attgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataa 106  Q
    |||||||||||||||||||||||||||||||| |||||||||  |  ||| | |||| |||| |||||||||| | || ||| ||||||||  |||||||    
T  54935067 agggtgtgtttggattgagggtttaggagggg-aagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataa 54935165  T
Q  107 gttaagtgtttttgaagtattt-tatgatcatttatcat 144  Q
     ||||||||  ||||||||||| ||||||| ||||||||    
T  54935166 attaagtgtgattgaagtatttatatgatcgtttatcat 54935204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 26166935 - 26167075
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||||||||||||||| || |||||| |  |||  ||||| |||| ||||||||   | || ||| |||||| |  ||||||    
T  26166935 ttagggtgtgtttggattgagggtttaggagggg-aatggaggggagagtttgtttttcttttttaaattacagactatataacatgtttctctaaaata 26167033  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | ||||||||  |||||||||| ||||||| |||||||||||    
T  26167034 aattaagtgtgattgaagtattatatgatcgtttatcatgtt 26167075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 1968603 - 1968465
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||| ||||||||||||| |  ||| | ||||  ||| |||||||||  | || ||| ||||||||  |||||||     
T  1968603 agggtgtgtttggattgagggtttagga-ggggaagggagggaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaataaa 1968505  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | | ||||  |||||||||| ||||||| |||||||||||    
T  1968504 tcaggtgtgattgaagtattatatgatcgtttatcatgtt 1968465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 27735749 - 27735883
Alignment:
Q  12 tgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaa 111  Q
    ||||||||||| |||||||||||||||| |||||| |  |  ||| | ||||  ||| |||||||||  | || ||| ||||||||| ||||||| ||||    
T  27735749 tgtgtttggatcgagggtttaggagggg-aagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaa 27735847  T
Q  112 gtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||||  |||||||||| |||||||||||||||||||    
T  27735848 gtgtgattgaagtattatatgatcatttatcatgtt 27735883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 51075217 - 51075268
Alignment:
Q  129 tatgatcatttatcatgttgttaattaaattttctaaaaattattttataat 180  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  51075217 tatgatcatttatcatgttgttaattcaattttttaaaaattattttataat 51075268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 21695040 - 21694939
Alignment:
Q  102 aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaa 201  Q
    ||||| ||||||||  |||||||||| |||||||||| ||||| |||||| || |||||  ||||||  |||||||| |||||||||| |||||||||||    
T  21695040 aataaattaagtgtgattgaagtattatatgatcatt-atcattttgttatttcaatttattaaaaaccattttatagtgtccgtaatttaaaaaagaaa 21694942  T
Q  202 agt 204  Q
    |||    
T  21694941 agt 21694939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 35543411 - 35543315
Alignment:
Q  149 ttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccctta 245  Q
    |||||| |||||| |||||||||||||||||||| | |||| |||||||||||| | | |  ||||||| |||||||| |||| |||||||| ||||    
T  35543411 ttaattcaattttttaaaaattattttataatgttcctaatttaaaaaagaaaaataagttctcccttcttaaaccctccatctaaacacactctta 35543315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 246
Target Start/End: Original strand, 44145842 - 44145968
Alignment:
Q  120 gaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcct 219  Q
    ||||||||  |||||||||||| ||| |||||||| |||||| ||||||| |||||||||||||  |||  |||||||| || || |  | |||| ||||    
T  44145842 gaagtattacatgatcatttataatgctgttaattcaattttttaaaaatcattttataatgtctttaaattaaaaaaggaatgtaagccctcccctcct 44145941  T
Q  220 aaacccttcatccaaacacacccttaa 246  Q
    |||||||   |||||| ||||||||||    
T  44145942 aaaccctctttccaaatacacccttaa 44145968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 47846505 - 47846369
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttca-aaataagt 108  Q
    ||||||||||||||||||||||| |||| | ||||||  | |  ||| | ||||||||| ||||||| || ||||||||| ||||||||   |||||| |    
T  47846505 ggtgtgtttggattgagggtttaagaggag-aagggaaaggaaggtttacttttattttttaaattatgaacaatgtaaagtgtttttttttaaataaat 47846407  T
Q  109 taagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||||| |||| |||||||| |||||| ||||||||||||    
T  47846406 taagtatttt-gaagtattatatgattatttatcatgtt 47846369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 5731072 - 5730936
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgt-aaattacgagcaatgtaaaatgttttttcaaaataagtt 109  Q
    ||||||||| ||||||||||||||||||| ||||||||| |  |||  ||||  |||| | ||||||||  | || ||| |||||| |  ||||||| ||    
T  5731072 gtgtgtttgaattgagggtttaggagggg-aagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaataaatt 5730974  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||||||  |||||||||| |||||||||||||||||||    
T  5730973 aagtgtaattgaagtattatatgatcatttatcatgtt 5730936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 31348565 - 31348370
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |  ||| | |||| |||| ||||| |||  | || ||| ||||||||  |||||||     
T  31348565 agggtgtgtttggattgagagtttagga-ggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaa 31348467  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||| ||||  ||||| |||| ||||||  |||||||||||  ||  | |  ||| ||||||  |||| ||| |||||||||| |||||| |||||||    
T  31348466 ttatgtgtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 31348370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 245
Target Start/End: Original strand, 45741888 - 45742136
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||||||||||| |||||| | | |  |   || | |||| |||| |||||||||  | || |||  |||||||  ||||||    
T  45741888 ttagggtgtgtttggattgagggtttagga-ggggaatgaatgtgaggatttacttttgttttttaaattacggactatataacttgtttttctaaaata 45741986  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtt 205  Q
    | |||| |||  |||||||||| ||||||| |||||||||||  ||  | || ||| ||||||  |||| ||| |||||||||| |||||| |||||||     
T  45741987 aattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagta 45742086  T
Q  206 aa-tct----tccctt-----cctaaacccttcatccaaacacaccctta 245  Q
    || |||    ||||||     |||||||||||||||||||||||||||||    
T  45742087 aactctcccctccctttcccgcctaaacccttcatccaaacacaccctta 45742136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 49735738 - 49735696
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  49735738 ttagggtgtgtttggattgagggtttagga-ggggaagggaggg 49735696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 54320680 - 54320638
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  54320680 ttagggtgtgtttggattgagggtttagga-ggggaagggaggg 54320638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 54935318 - 54935244
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacg 78  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||| |  ||| ||||||  ||| |||||||||    
T  54935318 ttcttagggtgtgtttggatggagggtttagga-ggggaagggaggggagggtttatttttcatttttaaattacg 54935244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 49735468 - 49735537
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacg 78  Q
    |||||||||||||||||||||||||||| ||||||||||||| |  ||||| ||||  ||| |||||||||    
T  49735468 agggtgtgtttggattgagggtttagga-ggggaagggaggggagggttcacttttcatttttaaattacg 49735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 17938259 - 17938158
Alignment:
Q  101 aaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    |||||| ||||||||  |||||||||| ||||||| ||||||||||| ||| || || ||| ||||||  |||  ||||||||| |||| |||||| |||    
T  17938259 aaataaattaagtgtgattgaagtattatatgatcgtttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaa 17938160  T
Q  201 aa 202  Q
    ||    
T  17938159 aa 17938158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 41174354 - 41174387
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||||||||||||||||||    
T  41174354 ttagggtgtgtttggattgagggtttaggagggg 41174387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 27735987 - 27735900
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgtttttt 98  Q
    ||||||||||||| |||||||||||| ||||||||||||  |  ||||||||||  ||| |||||||||  || | |||||||||||||    
T  27735987 ggtgtgtttggatggagggtttagga-ggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgtttttt 27735900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 37711369 - 37711327
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  37711369 ttagggtgtgtttggatggagggtttagga-ggggaagggaggg 37711327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 44145769 - 44145843
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacga 79  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||| |    ||| ||||||||| ||||||||||    
T  44145769 tcttagggtgtgtttggattcaaggtttagga-ggggaagggaggggaggactcacttttattttttaaattacga 44145843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 27775580 - 27775614
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggg 39  Q
    |||||||| ||||||||||||||||||||||||||    
T  27775580 cttagggtttgtttggattgagggtttaggagggg 27775614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 35248742 - 35248824
Alignment:
Q  65 ttttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||| |||||||||  | || ||| ||||||||  ||||||| ||||||||  |||||||||| |||||| ||||||||||||    
T  35248742 ttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgtt 35248824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 54320435 - 54320465
Alignment:
Q  8 agggtgtgtttggattgagggtttaggaggg 38  Q
    |||||||||||||||||||||||||||||||    
T  54320435 agggtgtgtttggattgagggtttaggaggg 54320465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 24565381 - 24565344
Alignment:
Q  208 tcttcccttcctaaacccttcatccaaacacaccctta 245  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  24565381 tcttcccttcctaaaccttccatccaaacacaccctta 24565344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 29798288 - 29798356
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattac 77  Q
    |||||||||||||||||| ||||||||| ||||||| ||| | || ||| | ||||||||| ||||||||    
T  29798288 agggtgtgtttggattgatggtttagga-ggggaagagagaggatagtttacttttattttttaaattac 29798356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 36151657 - 36151714
Alignment:
Q  90 atgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||||||||  ||||||| ||||||||  |||||||||| ||||||| |||||||||||    
T  36151657 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 36151714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 37711333 - 37711378
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacacccttaaagaatttg 254  Q
    |||||| ||||||||||| |||||||||||||||| |||| |||||    
T  37711333 cttcccctcctaaaccctccatccaaacacaccctaaaaggatttg 37711378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 41174589 - 41174549
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  41174589 agggtgtgtttggatggagggtttagga-ggggaagggaggg 41174549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 53260752 - 53260715
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacacccttaa 246  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  53260752 cttcccctcctaaaccctccatccaaacacacccttaa 53260715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 53260718 - 53260758
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  53260718 agggtgtgtttggatggagggtttagga-ggggaagggaggg 53260758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 56135908 - 56135965
Alignment:
Q  186 taatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    |||| |||||||||||||| |  | |||| ||||||||||| ||||||||||||||||    
T  56135908 taatttaaaaaagaaaagtaagccctcccctcctaaaccctccatccaaacacaccct 56135965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 56135967 - 56135934
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||| ||||||||||||||||    
T  56135967 ttagggtgtgtttggatggagggtttaggagggg 56135934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 5730828 - 5730860
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggaggg 38  Q
    ||||||||||||||||| |||||||||||||||    
T  5730828 ttagggtgtgtttggatggagggtttaggaggg 5730860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 22920979 - 22921011
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggaggg 38  Q
    |||||||||||||||||||| ||||||||||||    
T  22920979 ttagggtgtgtttggattgatggtttaggaggg 22921011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 22970820 - 22970788
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggaggg 38  Q
    |||||||||||||||||||| ||||||||||||    
T  22970820 ttagggtgtgtttggattgatggtttaggaggg 22970788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 37711172 - 37711132
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacacccttaaaga 249  Q
    |||||| |||||||||||  |||||||||||||||||||||    
T  37711172 cttcccctcctaaaccctcaatccaaacacacccttaaaga 37711132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 41174555 - 41174591
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacaccctta 245  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  41174555 cttcccctcctaaaccctccatccaaacacaccctta 41174591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 47694458 - 47694490
Alignment:
Q  118 ttgaagtattttatgatcatttatcatgttgtt 150  Q
    |||||||||| ||||||||||||||||||||||    
T  47694458 ttgaagtattatatgatcatttatcatgttgtt 47694490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 9 - 177
Target Start/End: Original strand, 43826333 - 43826500
Alignment:
Q  9 gggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagt 108  Q
    |||||||||| |||||||| ||||||||||| || |||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43826333 gggtgtgtttagattgaggatttaggagggg-aatggaggggagagttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagt 43826431  T
Q  109 taagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttat 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43826432 taagtgtttttgaagtattttatgatcatttatcatgttgttaattcaattttctaaaaattattttat 43826500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 3 - 204
Target Start/End: Complemental strand, 12022392 - 12022192
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaa 102  Q
    |||| |||||||||||||||||||||||||||||||| |||| |||| |  | ||| ||||||||| |||||||||  |||||||||||||||||| |||    
T  12022392 ttctaagggtgtgtttggattgagggtttaggaggggaaagg-aggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaa 12022294  T
Q  103 ataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||||||    
T  12022293 ataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaa 12022194  T
Q  203 gt 204  Q
    ||    
T  12022193 gt 12022192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 8815385 - 8815190
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||||||||| ||||||| |  ||||| ||||| ||| |||||||||| || |||||||||||||||||||  ||     
T  8815385 agggtgtgtttggattgagggtttaggaggggga-gggaggggagggttcacttttaatttttaaattacgaacactgtaaaatgttttttcaaataaat 8815287  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    | |||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  8815286 taaagtgtttttgaagtattatataatcatttatcatgttgttgattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaaaagt 8815190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 16024150 - 16024341
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatg-ttttttcaaaa 103  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||| |  | ||| ||||  ||| |||||||||| |||| ||||||| ||||||  |||    
T  16024150 cttatggtgtgtttggattgagggtttaggaaggg-aagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttttttaaa 16024248  T
Q  104 taagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaa 196  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  16024249 taaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 16024341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 6 - 203
Target Start/End: Original strand, 30365128 - 30365324
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||||||||||||| | |||| |||| |  ||||| ||||| ||| |||||||||| |||  |||||| |||||| | ||||    
T  30365128 ttagggtgtgtttggattgagggtttaggaggagaaagg-aggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaata 30365226  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    | ||||||||||||||||| || ||| |||||||||||||||||||||| |||||||||||||| |||| |||||||| ||||| |||||||||||||    
T  30365227 aattaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaattttctaaaaatcatttcataatgtctgtaatttaaaaaagaaaag 30365324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 43732679 - 43732882
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttc-------- 99  Q
    |||||||||||||||||||||||||||||||| ||||||| | |    ||| ||||||||| |||||||| | ||||||||||||||||||             
T  43732679 agggtgtgtttggattgagggtttaggagggg-aagggagaggaggactcacttttattttttaaattactaacaatgtaaaatgtttttttttttaaaa 43732777  T
Q  100 aaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaaga 199  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||    
T  43732778 aaaataaattaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatgtccgtaatttaaaaaaga 43732877  T
Q  200 aaagt 204  Q
    |||||    
T  43732878 aaagt 43732882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 9933240 - 9933475
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgtttt-ttcaaaataa 106  Q
    |||||||||||||||||| ||||||||||| | |||| |||| |   |||| |||||| || |||||||||| ||||||||||| |||| ||||||||||    
T  9933240 agggtgtgtttggattgaaggtttaggaggagaaagg-agggaagaattcacttttatattttaaattacgaacaatgtaaaatatttttttcaaaataa 9933338  T
Q  107 gttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtta 206  Q
     |||||| |||||||| |||| |||||||||||||||||||||||||| |||||| | ||||| ||||||||||||||  | | |||||||||||||| |    
T  9933339 attaagtatttttgaaatattatatgatcatttatcatgttgttaattcaatttttttaaaatcattttataatgtccaaattttaaaaaagaaaagtaa 9933438  T
Q  207 atcttcccttcctaaacccttcatccaaacacaccct 243  Q
    | | |||| |||||||  || |||||||||| |||||    
T  9933439 accctcccctcctaaattctccatccaaacataccct 9933475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 20472933 - 20472741
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtta 110  Q
    ||||||||||||||| ||||||| ||||  |||||| || |    ||| ||||||||| |||||||||| ||||||||  |||||||| ||||||| | |    
T  20472933 gtgtgtttggattgaaggtttagaaggga-aagggaaggaaggactcacttttattttttaaattacgaacaatgtaagttgttttttaaaaataaatca 20472835  T
Q  111 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  20472834 agtgtttttgaagtattatatgatcatatatcatattgttaattcaattttctaaaatttattttataatgtctgtaatttaaaaaagaaaagt 20472741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 8 - 195
Target Start/End: Complemental strand, 40633232 - 40633047
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||| ||| ||| |||| || | |  ||||| ||||| ||| | |||||||| ||| |||||||||| ||| |||||||     
T  40633232 agggtgtgtttggattgagggtttcggaaggg-aaggaagcggag-gttcaattttaatttttcaattacgaacaacgtaaaatgttgttttaaaataaa 40633135  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaa 195  Q
    ||||||||||||||| |||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  40633134 ttaagtgtttttgaaatattatacaatcatttatcatgttgttaattcaattttctaaaaattattttataatgtccgtaatttaaaa 40633047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 196
Target Start/End: Complemental strand, 8672040 - 8671849
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||| ||||| ||||| |||| |||| ||   | | ||||||||| |||||||| |  |||||||||||| |||| ||||||    
T  8672040 ttagggtgtgtttggattgaggatttagaagggg-aaggtaggggatgacttaattttattttttaaattacaaataatgtaaaatgtatttttaaaata 8671942  T
Q  106 agttaagtgtttttgaagtattttatgatca--tttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaa 196  Q
    | |||||| ||||||||||||| ||||||||  ||| |||| ||||||||| |||||||||||||| ||||||||||||||||||| ||||||    
T  8671941 aattaagtatttttgaagtattatatgatcatttttttcatattgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaa 8671849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 189
Target Start/End: Complemental strand, 9434543 - 9434362
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaa-aataa 106  Q
    ||||||||||||||||||||||||| |||||  ||  || || |  ||||| ||||||||| ||||||| || ||||||||||||||||||    |||||    
T  9434543 agggtgtgtttggattgagggtttacgaggg--aatagatggaagagttcacttttattttttaaattaggaacaatgtaaaatgttttttttttaataa 9434446  T
Q  107 gttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaatta-ttttataatgtccgtaat 189  Q
     ||||||| |||||||||||| ||| |||||||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||    
T  9434445 attaagtggttttgaagtattatattatcatttatcatgttgttaattcaattttttaaaaattatttttataatatccgtaat 9434362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 179
Target Start/End: Original strand, 39449355 - 39449474
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| |||||||||| |||||| |||||| |||| || |||| |||| ||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  39449355 ttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatcatgttgttaattcaatt 39449454  T
Q  160 ttctaaaaattattttataa 179  Q
    || ||||||| |||||||||    
T  39449455 ttttaaaaataattttataa 39449474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 6453239 - 6453378
Alignment:
Q  65 ttttgtaaattacgagcaatgtaaaatgttttttc-aaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttct 163  Q
    |||| ||||||||||  |||||||||| ||||||  ||||||  |||||||||||||||||||| |||||| | |||||||||| |||||| ||||||||    
T  6453239 ttttttaaattacgaataatgtaaaatattttttttaaaatatattaagtgtttttgaagtattatatgattacttatcatgttattaattcaattttct 6453338  T
Q  164 aaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    |||||| |||||||||||   ||||| |||||| ||||||    
T  6453339 aaaaatcattttataatgattgtaatttaaaaaggaaaag 6453378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 29937614 - 29937697
Alignment:
Q  121 aagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| | ||||||||||||    
T  29937614 aagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataattttaaaaagaaaagt 29937697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 196
Target Start/End: Original strand, 34196409 - 34196496
Alignment:
Q  109 taagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaa 196  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||| ||||| ||||||    
T  34196409 taagtgtttttgaagtattatatgatcgtttatcttgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaaaa 34196496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 1027092 - 1026863
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||| ||||||||||| ||| ||||||||| |  ||||| |||| |||| |||||||||  | || |||| |||||||  |||||||     
T  1027092 agggtgtgtttggattaagggtttaggaaggg-aagggagggaagggttcacttttcttttttaaattacggactatataaa-tgtttttctaaaataaa 1026995  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaa 207  Q
    |||||| |  |||||||||| ||||||| |||||||||||  ||  | || |||  | ||| ||||| ||| |||||| ||| |||||| ||||||| ||    
T  1026994 ttaagtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaa 1026895  T
Q  208 tcttcccttcctaaacccttcatccaaacaca 239  Q
     | |||| ||||||||||| ||||||||||||    
T  1026894 ccctcccctcctaaaccctccatccaaacaca 1026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 7394701 - 7394616
Alignment:
Q  12 tgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgtttttt 98  Q
    |||||||||||||||||||||||||||| ||||||||| || ||||| ||||||||| |||||||||| ||||| |||| |||||||    
T  7394701 tgtgtttggattgagggtttaggagggg-aagggaggggatggttcacttttattttttaaattacgaacaatgcaaaacgtttttt 7394616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 9718723 - 9718486
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||||| | ||||||||| |  ||| | |||| |||| ||||||| || | || ||| || |||||  |||||       
T  9718723 agggtgtgtttggattgagggtttaggaggag-aagggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaaattca 9718625  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaa 207  Q
    |||| |||  |||||||||| ||||||  |||||||||||  ||    || ||| ||||||  |||| ||| |||||||||| |||||| |||||   ||    
T  9718624 ttaattgtgattgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaatcgaa 9718525  T
Q  208 tcttcccttcctaaacccttcatccaaacacacccttaa 246  Q
     | |||| ||||||||||| |||||||||||||||||||    
T  9718524 ccctcccctcctaaaccctccatccaaacacacccttaa 9718486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 248
Target Start/End: Complemental strand, 29358490 - 29358345
Alignment:
Q  102 aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaa 201  Q
    ||||| ||||||||  |||||||||| || |||| ||||| |||||  ||  | |||||| |||||| ||||||||| |||||||||| ||||||  |||    
T  29358490 aataaattaagtgtgattgaagtattataggatcgtttataatgttaatatgttaatttt-taaaaaatattttatagtgtccgtaatttaaaaataaaa 29358392  T
Q  202 agttaatcttcccttcctaaacccttcatccaaacacacccttaaag 248  Q
    ||| || |||| | ||||||||||| |||||||||||| ||| ||||    
T  29358391 agtaaaccttctcctcctaaaccctccatccaaacacaacctaaaag 29358345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 31543318 - 31543178
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| |  ||| | |||| |||| ||||||| |  | || ||| ||||||||  ||||||    
T  31543318 ttagggtgtgtttcgattgagggtttagga-ggggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaata 31543220  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | ||||||||  |||||||||| ||||| | ||||| |||||    
T  31543219 aattaagtgtgattgaagtattatatgaccgtttatgatgtt 31543178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 27487067 - 27487131
Alignment:
Q  86 taaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgtt 150  Q
    ||||||||||||  ||||  | ||||||||| |||||||||| ||||||||||||||||||||||    
T  27487067 taaaatgtttttctaaaaccaattaagtgttattgaagtattatatgatcatttatcatgttgtt 27487131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 38021531 - 38021409
Alignment:
Q  55 ttcatttttattttgtaaattacgagcaatgtaaaatgttt-tttcaaaataagttaagtgt-ttttgaagtattttatgatcatttatcatgttgttaa 152  Q
    |||||||||||||| ||||||| ||  |||||||||| | | ||| ||||||| |||||| | |||||||||||| |||||||||||||       ||||    
T  38021531 ttcatttttattttttaaattaggaataatgtaaaatatatattttaaaataaattaagtttattttgaagtattatatgatcatttat-------ttaa 38021439  T
Q  153 ttaaattttctaaaaattattttataatgt 182  Q
    || ||||||  |||||||||||||||||||    
T  38021438 ttcaatttttaaaaaattattttataatgt 38021409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 41103699 - 41103612
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||| |||| |||||||| ||| || ||| ||||||||  ||||||| ||||||||  |||||||||| ||||||| |||||||||||    
T  41103699 ttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 41103612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 7979138 - 7979278
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||| ||||||||||||||||||||| || | ||||||||| | |  ||| | |||| |||| |||||||||  | || ||| ||||||||  ||||||    
T  7979138 ttaggatgtgtttggattgagggttta-gaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaata 7979236  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | | |||||   |||||||||| |||||| ||||||||||||    
T  7979237 aatcaagtgcaattgaagtattatatgattatttatcatgtt 7979278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 24243206 - 24243084
Alignment:
Q  93 ttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatcta 192  Q
    |||||||||| ||| ||||||||  |||||||||| ||||||||||||||||||| ||| || |||||| |||||   |||||||| ||| |||||| |     
T  24243206 ttttttcaaattaa-ttaagtgtgattgaagtattatatgatcatttatcatgttattatttcaatttt-taaaagacattttatagtgt-cgtaatttc 24243110  T
Q  193 aaaaagaaaagttaatcttcccttcc 218  Q
    |||| ||||||| | || ||||||||    
T  24243109 aaaatgaaaagtaagtcatcccttcc 24243084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 1027058 - 1027094
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacaccctta 245  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1027058 cttcccttcctaaacccttaatccaaacacaccctta 1027094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 2248450 - 2248521
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacg 78  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| |  ||||| |||  |||| |||||||||    
T  2248450 ttagggtgtgtttggattgagagtttagga-ggggaagggaggggagagttcaatttccttttttaaattacg 2248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 27483637 - 27483701
Alignment:
Q  86 taaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgtt 150  Q
    |||||||||||||  |||||| | ||||||| |||||||||| |||||| |||||||||| ||||    
T  27483637 taaaatgttttttttaaataaataaagtgttattgaagtattatatgataatttatcatgctgtt 27483701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 31738516 - 31738615
Alignment:
Q  102 aataagttaagtgtttttgaagtattttatgatcatttatcatgttgtta-attaaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    ||||| ||||||||  |||||||||| |||||||||||||||||||  ||  |||| | ||| ||||| ||||||||| |||||||||| |||||| |||    
T  31738516 aataaattaagtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttc-aaaaaatattttatagtgtccgtaatttaaaaatgaa 31738614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 43732933 - 43732862
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacg 78  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| |  ||| | |||| |||| |||||||||    
T  43732933 ttagggtgtgtttggatggagggtttagga-ggggaagggaggggagggtttacttttcttttttaaattacg 43732862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 8815137 - 8815172
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8815137 tcttagggtgtgtttggatggagggtttaggagggg 8815172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 38198208 - 38198141
Alignment:
Q  94 tttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatttt 161  Q
    ||||| ||||| | ||||||||  |||||||||| ||||||||| ||||||||||||| || ||||||    
T  38198208 ttttttaaaatgaattaagtgtgattgaagtattatatgatcatatatcatgttgttatttcaatttt 38198141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 2482021 - 2481976
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggagggc 50  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  2482021 tcttagggtatgtttggatggagggtttagga-ggggaagggagggc 2481976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3726856 - 3726894
Alignment:
Q  1 ttttcttagggtgtgtttggattgagggtttaggagggg 39  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  3726856 tttttttagggtgtgtttggatggagggtttaggagggg 3726894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 11785774 - 11785740
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggaggg 38  Q
    ||||||||||||||||||| |||||||||||||||    
T  11785774 tcttagggtgtgtttggatggagggtttaggaggg 11785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 22591543 - 22591501
Alignment:
Q  118 ttgaagtattttatgatcatttatcatgttgttaattaaattt 160  Q
    |||||||||| |||||||||||||||||||||| ||| |||||    
T  22591543 ttgaagtattatatgatcatttatcatgttgttcattcaattt 22591501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Complemental strand, 37032626 - 37032596
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggag 36  Q
    |||||||||||||||||||||||||||||||    
T  37032626 ttagggtgtgtttggattgagggtttaggag 37032596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 37
Target Start/End: Original strand, 6315066 - 6315095
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagg 37  Q
    ||||||||||||||||||||||||||||||    
T  6315066 agggtgtgtttggattgagggtttaggagg 6315095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 16652958 - 16652991
Alignment:
Q  8 agggtgtgtttggattgagggtttaggaggggga 41  Q
    |||||||||||||||||||||||| |||||||||    
T  16652958 agggtgtgtttggattgagggttttggaggggga 16652991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 30581955 - 30581914
Alignment:
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgt 149  Q
    ||||||||  |||||||||| |||||||||||||||||||||    
T  30581955 ttaagtgtgattgaagtattatatgatcatttatcatgttgt 30581914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 31738669 - 31738636
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||| ||||||||||||||||    
T  31738669 ttagggtgtgtttggatggagggtttaggagggg 31738636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 41103539 - 41103502
Alignment:
Q  208 tcttcccttcctaaacccttcatccaaacacaccctta 245  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  41103539 tcttcccctcctaaaccctccatccaaacacaccctta 41103502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 4247764 - 4247725
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagg 48  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  4247764 agggtgtgtttggattgaaggtttagga-ggggaagggagg 4247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 26167842 - 26167894
Alignment:
Q  95 ttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||| ||||||| | ||| ||| |||||||||| |||||||||||||||||||    
T  26167842 tttttaaaataaataaagagttattgaagtattatatgatcatttatcatgtt 26167894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 33922520 - 33922552
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttagga 35  Q
    |||||||||| ||||||||||||||||||||||    
T  33922520 ttcttagggtatgtttggattgagggtttagga 33922552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 40305909 - 40305670
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||||| | ||||||||| |    ||||||||||||| |||||||||| ||||||||||||||||||||||||||     
T  40305909 agggtgtgtttggattgagggtttaggaggag-aagggaggggagaactcatttttattttttaaattacgaccaatgtaaaatgttttttcaaaataaa 40305811  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtta- 206  Q
    ||||| |||||||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||| | |     
T  40305810 ttaagggtttttgaagtactatatgatcatttatcatattgttaattcaattttctaaaaattattttataatgtctgtaatttaaaaaagaaaactaag 40305711  T
Q  207 ----atcttcccttcctaaacccttcatccaaacacaccct 243  Q
          |||||| ||||||||||| ||||||||||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 34980812 - 34981005
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtt 109  Q
    |||||||||||||||| ||||||||||||| ||||||||| |  ||||| ||||| ||| |||||||||| ||| ||||||| |||||| ||||||| ||    
T  34980812 ggtgtgtttggattgaaggtttaggagggg-aagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaatt 34980910  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | ||||||||| |||| |||||||||||||| |||| ||||||||||||||    
T  34980911 aagtgtttttgaagtattatataatcatttatcatgttgttaactcaattttctataaatcattttataatgtccataatttaaaaaagaaaagt 34981005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 10204576 - 10204771
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||| |||||||||||||||| ||||||||  |  | ||| ||||||||| |||||||| | ||||||||||||| |||| |||||||     
T  10204576 agggtgtgtttggatcgagggtttaggagggg-aagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaataaa 10204674  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||| |||||| ||||||| ||||| ||||||| ||||  ||||||||||||||    
T  10204675 ttaagtgtttttgaagtattatatgatcatttattacgttgttaattcaattttttaaaaatcattttttaatgtctgtaaattaaaaaagaaaagt 10204771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 33744437 - 33744242
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||| |||||||||||||||||||||  | ||||||||| |  | ||| |||||| || |||||||||| ||||  |||||||||||| |||||||     
T  33744437 agggtgtatttggattgagggtttaggagatg-aagggaggggagggctcacttttatattttaaattacgaacaattcaaaatgtttttttaaaataaa 33744339  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||||||| | | |||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| |||| ||||||||||||||    
T  33744338 ttaagtgtttttgaagaaatatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccataatttaaaaaagaaaagt 33744242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 6 - 206
Target Start/End: Original strand, 21580945 - 21581145
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||| ||||||||| |||||| |||| |  ||||||||| |  | ||| ||||||||| |||||||||| ||||||||||| |||||| ||||||    
T  21580945 ttagggtgtatttggattgggggttttggagaga-aagggaggggaggggtcacttttattttctaaattacgaacaatgtaaaatatttttttaaaata 21581043  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatct-aaaaaagaaaagt 204  Q
    | |||||||||||||||||||  ||||| |||||||||||||||||||| ||||||||||||||||||| |||| |||| |||| | |||||||||||||    
T  21581044 aattaagtgtttttgaagtatcatatgaacatttatcatgttgttaattcaattttctaaaaattatttcataacgtccataatttaaaaaaagaaaagt 21581143  T
Q  205 ta 206  Q
    ||    
T  21581144 ta 21581145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 10043252 - 10043447
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||| ||| |||||| |||||| |||||| ||||||||| ||   ||| ||||||||| |||||||||| ||||||||||| || ||| |||| ||     
T  10043252 agggtgtatttagattgatggtttatgagggg-aagggaggggatgactcacttttattttttaaattacgaacaatgtaaaatattgttttaaaagaaa 10043350  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||||||||||| |||||| |||||| |||||||||||| |||||||||||||| |||||||||| | |||||| ||||||||||||||    
T  10043351 ttaagtgtttttgaagtattatatgattatttataatgttgttaattcaattttctaaaaatcattttataatattcgtaatttaaaaaagaaaagt 10043447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 15986868 - 15986675
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||||||| |||| || | |  | ||| ||||||||| |||||||||| ||||||||||||| |||| |||||||     
T  15986868 agggtgtgtttggattgagggtttaggagggg-aaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaataaa 15986770  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
    |||||||||||| ||||||| |||||||||||   |||||||||||| |||||| ||||| | ||||||||||||| ||||  ||||||||||||    
T  15986769 ttaagtgtttttaaagtattatatgatcattttaaatgttgttaattcaattttttaaaagtcattttataatgtctgtaaattaaaaaagaaaa 15986675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 183
Target Start/End: Complemental strand, 8551660 - 8551488
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtt 109  Q
    |||||||||||||||| ||||||||||||| ||| |||||      ||| ||||||||| |||||||||||||||||||||||| |||| ||||||| ||    
T  8551660 ggtgtgtttggattgaaggtttaggagggg-aagagagggggggtctcacttttattttttaaattacgagcaatgtaaaatgtgttttaaaaataaatt 8551562  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtc 183  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||    
T  8551561 aagtgtttttaaagtattatatgatcatttataatgttgttaatttaattttttaaaaatcattttataatgtc 8551488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 5688458 - 5688572
Alignment:
Q  54 gttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaat 153  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||| ||||||  |||||||||||||||||||| ||| |||||  ||||||||||||||    
T  5688458 gttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcatcaatcatgttgttaat 5688557  T
Q  154 taaattttctaaaaa 168  Q
    | |||||||||||||    
T  5688558 tcaattttctaaaaa 5688572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 204
Target Start/End: Complemental strand, 6597979 - 6597839
Alignment:
Q  56 tcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaatta 155  Q
    ||||||||||||| ||||||| ||  |||||||||| |||||| ||||||| ||||||||       ||||| ||||||||||||||||||||||| ||     
T  6597979 tcatttttattttttaaattatgaataatgtaaaatatttttt-aaaataaattaagtgt-------gtattatatgatcatttatcatgttgttatttc 6597888  T
Q  156 aattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||| |||||| |||||| |||||||||||| ||||||||||||||    
T  6597887 aattttcaaaaaatcattttacaatgtccgtaatttaaaaaagaaaagt 6597839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 6382419 - 6382522
Alignment:
Q  101 aaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    |||||| |||||| ||||||||||||   |||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||  || |||||||    
T  6382419 aaataaattaagtctttttgaagtatcacatgaacatttatcatgttgttaattcaattttctaaaaagtattttataatgtccgtaaattagaaaagaa 6382518  T
Q  201 aagt 204  Q
    ||||    
T  6382519 aagt 6382522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 12036087 - 12035987
Alignment:
Q  101 aaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    |||||| |||||||||||| ||||||| |||||| ||||||||||||| ||||| |||||||||| ||| |||||||||||| | |||| ||||||||||    
T  12036087 aaataaattaagtgttttttaagtattatatgataatttatcatgttg-taattcaattttctaataataattttataatgttcataatttaaaaaagaa 12035989  T
Q  201 aa 202  Q
    ||    
T  12035988 aa 12035987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 16938477 - 16938617
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |  |||  ||||| |||| ||| |||||  | || ||| |||||| |  ||||||    
T  16938477 ttagggtgtgtttggattgagggtttagga-ggggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaata 16938575  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | ||||||||  ||||| |||| |||||||||||||||||||    
T  16938576 aattaagtgtgattgaaatattatatgatcatttatcatgtt 16938617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 10043154 - 10043058
Alignment:
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| |||| ||| | ||||||   |||| ||| ||||||||||    
T  10043154 ttaagtgtttttaaagtattatatgatcatttatcatgttgttaattcaattttctagaaataattctttaatgtttataatttaagaaagaaaagt 10043058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 11756871 - 11757015
Alignment:
Q  1 ttttcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttca 100  Q
    |||| ||||| ||||||||||||||||||||||||||||  ||||| || |  |||  |||||||||| |||||||||| | || ||| |||||| |  |    
T  11756871 ttttattaggatgtgtttggattgagggtttaggagggg--agggatgggagagtttgtttttattttttaaattacgaactatataacatgtttctcta 11756968  T
Q  101 aaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||||| ||||||||  || ||||||| ||||||||||||| |||||    
T  11756969 aaataaattaagtgtgattaaagtattatatgatcatttatgatgtt 11757015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 13634711 - 13634906
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||| ||||||||||||| |  ||| | |||| |||| ||||| |||  | || ||| ||||||||  |||||||     
T  13634711 agggtgtgtttggattgagggtttagga-ggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaa 13634809  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||| ||||  ||||| |||| ||||||| |||||||||||  ||  | || ||| ||||||  |||| ||| ||| |||||| |||||| |||||||    
T  13634810 ttatgtgtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaagt 13634906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 14245294 - 14245250
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  14245294 tcttagggtgtgtttggattgagggtttagga-ggggaagggaggg 14245250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 15858989 - 15858882
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaa 102  Q
    ||||||||||||||||| ||||||| ||| ||| || |||||||||| ||   |||  |||||||| |||||||||| ||||| ||||| |||||| |||    
T  15858989 ttcttagggtgtgtttgaattgaggctttggga-ggtgaagggaggggatgactcacatttattttctaaattacgaacaatggaaaatattttttaaaa 15858891  T
Q  103 ataagttaa 111  Q
    |||| ||||    
T  15858890 ataaattaa 15858882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 5688638 - 5688603
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||||||||||||||||||||    
T  5688638 tcttagggtgtgtttggattgagggtttaggagggg 5688603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 7544136 - 7544274
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||||||||||||  |||||||||||| |  | | | |||| |||| |||||||||  | || ||| ||||||||  |||||||     
T  7544136 agggtgtgtttggattgagggtttagga-agggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaataaa 7544234  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | ||||||  |||||||||| ||||||  ||||| |||||    
T  7544235 tcaagtgtgattgaagtattatatgattgtttattatgtt 7544274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 26414893 - 26415031
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||| || |||||||||| |  ||| | ||||  ||| |||||||||  | || | | ||||||||  ||||||      
T  26414893 agggtgtgtttggattgagggtttagga-ggagaagggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatata 26414991  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||||||||  |||||||||| |||| || |||||||||||    
T  26414992 ttaagtgtgattgaagtattatatggtcgtttatcatgtt 26415031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 28279640 - 28279525
Alignment:
Q  90 atgttttttc-aaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaa 188  Q
    |||||||||| |||||||  |||||||  |||||||||| |||||||||||||||||||  ||  | || ||| ||||||  |||| ||||||||| |||    
T  28279640 atgttttttctaaaataaactaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataa 28279541  T
Q  189 tctaaaaaagaaaagt 204  Q
    | |||||| |||||||    
T  28279540 tttaaaaatgaaaagt 28279525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 14245088 - 14245177
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgtttttt 98  Q
    |||||||||||||||||||||||||||| ||||||||||||| |   || | |||| |||| |||||||||  || ||| |||||||||||    
T  14245088 agggtgtgtttggattgagggtttagga-ggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgtttttt 14245177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 4373812 - 4373672
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||||||||||| ||| ||   || | |   || | |||| |||| |||||||||  | || ||| | ||||||| ||||||    
T  4373812 ttagggtgtgtttggattgagggtttaggaagggaaaat-agtggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaata 4373714  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | ||||||||  ||||| |||| |||||||||||||||||||    
T  4373713 aattaagtgtgattgaaatattatatgatcatttatcatgtt 4373672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 10476274 - 10476202
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacga 79  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| | |||| | || || ||| ||||||||||    
T  10476274 ttagggtgtgtttggatggagggtttagga-ggggaagggaggggagtgtttacttataatttttaaattacga 10476202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 20147114 - 20147074
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  20147114 agggtgtgtttggattgagggtttagga-ggggaagggaggg 20147074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 40305667 - 40305711
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggagggc 50  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||    
T  40305667 cttagggtgtgtttggatggagggtttagga-ggggaagggagggc 40305711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 175
Target Start/End: Original strand, 42681534 - 42681619
Alignment:
Q  90 atgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattatttt 175  Q
    ||||||||  ||||||| || |||||  || ||||||| ||||||||||||||||||| ||| || |||||| |||||| ||||||    
T  42681534 atgtttttctaaaataattttagtgtgattaaagtattatatgatcatttatcatgttattattttaattttttaaaaaatatttt 42681619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 13634954 - 13634915
Alignment:
Q  9 gggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  13634954 gggtgtgtttggattgagggtttagga-ggggaagggaggg 13634915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 22023608 - 22023572
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||| ||||||||||||||||    
T  22023608 ttcttagggtgtgtttggatggagggtttaggagggg 22023572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 9856890 - 9856921
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||||||||||||||||    
T  9856890 agggtgtgtttggattgagggtttaggagggg 9856921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 1658055 - 1657963
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaa 103  Q
    ||||||||||||| |||||||||||| ||||||||||||| |  ||| | ||||  ||| |||||||||  || | ||||||||||||| ||||    
T  1658055 ggtgtgtttggatggagggtttagga-ggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgttttttaaaaa 1657963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 2550592 - 2550556
Alignment:
Q  12 tgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2550592 tgtgtttggattgagggtttagga-ggggaagggaggg 2550556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 15986620 - 15986664
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||    
T  15986620 tcttagggtgtgtttggaaagagggtttagga-ggggaagggaggg 15986664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 39
Target Start/End: Original strand, 22022849 - 22022878
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||||||||||||||    
T  22022849 ggtgtgtttggattgagggtttaggagggg 22022878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 22023542 - 22023603
Alignment:
Q  182 tccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    |||||||| || ||| ||||||| || | |||| ||||||||||| ||||||||||||||||    
T  22023542 tccgtaatttataaatgaaaagtaaaccctcccctcctaaaccctccatccaaacacaccct 22023603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 194
Target Start/End: Original strand, 2183943 - 2183999
Alignment:
Q  138 ttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaa 194  Q
    |||||||||||||| || |||||| |||| |  ||||||||||||||||||| ||||    
T  2183943 ttatcatgttgttatttcaattttttaaataacattttataatgtccgtaatttaaa 2183999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 7544170 - 7544134
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacaccctta 245  Q
    ||||||||||||||||||  |||||||||||||||||    
T  7544170 cttcccttcctaaaccctcaatccaaacacaccctta 7544134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 8503077 - 8503049
Alignment:
Q  4 tcttagggtgtgtttggattgagggttta 32  Q
    |||||||||||||||||||||||||||||    
T  8503077 tcttagggtgtgtttggattgagggttta 8503049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 13298509 - 13298477
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagg 37  Q
    |||||||||||||||||| ||||||||||||||    
T  13298509 cttagggtgtgtttggatagagggtttaggagg 13298477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 14681473 - 14681501
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||||||||||||    
T  14681473 gtgtgtttggattgagggtttaggagggg 14681501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 14684729 - 14684697
Alignment:
Q  7 tagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||| |||||||||||||||    
T  14684729 tagggtgtgtttggatttagggtttaggagggg 14684697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 16502034 - 16502006
Alignment:
Q  10 ggtgtgtttggattgagggtttaggaggg 38  Q
    |||||||||||||||||||||||||||||    
T  16502034 ggtgtgtttggattgagggtttaggaggg 16502006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 26415141 - 26415097
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||| ||||||||||||| ||||||||| ||||||||| ||||||    
T  26415141 cttacggtgtgtttggatggagggtttatgagggggaaaggaggg 26415097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 29002288 - 29002220
Alignment:
Q  171 attttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacaca 239  Q
    |||||||| ||| | |||| |||||| ||||||| || | |||| ||||||||||| ||||||||||||    
T  29002288 attttatagtgttcataatttaaaaatgaaaagtaaaccctcccctcctaaaccctccatccaaacaca 29002220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 9e-61; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 8 - 202
Target Start/End: Complemental strand, 36267797 - 36267604
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||||||| ||||||||| |  | ||||||||||||| |||||||| | |||||||||||||||||||||||||      
T  36267797 agggtgtgtttggattgagggtttaggagggg-aagggaggggagggctcatttttattttttaaattacaaccaatgtaaaatgttttttcaaaatata 36267699  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
     ||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||| |||||||||| |||||||| ||||||||||||    
T  36267698 gtaagtgtttttgaagtattatatgatcatttatcatattgttgattcaattttctaaaaatcattttataatatccgtaatttaaaaaagaaaa 36267604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 8 - 202
Target Start/End: Original strand, 37925841 - 37926034
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||||||| ||||||||| |  ||||| ||||||||| |||||||||| ||||||||||||||||||  |||||      
T  37925841 agggtgtgtttggattgagggtttaggagggg-aagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaataga 37925939  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
    |||||||||||||||||||| ||| |||||  ||||||||||||||| ||||||||||| || ||||||||||||||||||| || |||||||||    
T  37925940 ttaagtgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaacatcattttataatgtccgtaatttagaaaagaaaa 37926034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 33519048 - 33519243
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||| |||||||||| |||| ||||||||||| ||||||||| |  | ||| ||||||||| |||||||||| |||| |||||||||||||  ||||||     
T  33519048 agggagtgtttggatggaggttttaggagggg-aagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaataaa 33519146  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||| |||||||||    
T  33519147 ttaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtctgtaatttaaagaagaaaagt 33519243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 39646467 - 39646699
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||| |||||||||| || ||||||||| |    ||| ||||||||| ||||||| || ||||||||||| | |||| ||||||    
T  39646467 ttagggtgtgtttggattgacggtttaggagagg-aagggaggggaggaatcacttttattttttaaattatgaacaatgtaaaatatatttttaaaata 39646565  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtt 205  Q
    | |||| ||||||||||||||| ||| |||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||| ||||||     
T  39646566 aattaactgtttttgaagtattatatcatcatcaatcatgttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaataaaagtg 39646665  T
Q  206 aatcttcccttcctaaacccttcatccaaacaca 239  Q
    | || |||| |||||||||||  |||||||||||    
T  39646666 agtcatcccctcctaaaccctcaatccaaacaca 39646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 25 - 249
Target Start/End: Original strand, 48013520 - 48013743
Alignment:
Q  25 agggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagt 124  Q
    ||||||||||||||| ||||||||| |  ||||  ||||||||| |||||||||| |||||||||||||||||| ||||||| |||||||||||||||      
T  48013520 agggtttaggagggg-aagggaggggagcgttcgcttttatttt-taaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaaa 48013617  T
Q  125 attt-tatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatct-tcccttcctaaa 222  Q
    |||  |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| || || |||||| |||||| ||| || |||| ||||||     
T  48013618 attcatatgatcatttatcatgttgttaattcaattttctaaaaattattttataaagtctgtgatttaaaaacgaaaag-taagctctcccctcctaat 48013716  T
Q  223 cccttcatccaaacacacccttaaaga 249  Q
    |||| ||||||||||||||||||||||    
T  48013717 ccctccatccaaacacacccttaaaga 48013743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 35422013 - 35422159
Alignment:
Q  58 atttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaa 157  Q
    ||||||||||| |||||||| | |||||||||||||||||| ||||||| |||||||||||||||||||  |||||| |||||| |||||||||||| ||    
T  35422013 atttttattttttaaattacaaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtatcatatgattatttattatgttgttaattcaa 35422112  T
Q  158 ttttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||    
T  35422113 ttttctaaaaattattttataatgtccgtaattttaaaaagaaaagt 35422159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 6 - 204
Target Start/End: Complemental strand, 28074354 - 28074152
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattt--tgtaaattacgagcaatgtaaaatgttttttca--- 100  Q
    ||||||||||||||||||||||||||||||| || |||| |||| |  | ||| ||||||||  | | ||| |||| ||||||||||||||||||         
T  28074354 ttagggtgtgtttggattgagggtttaggagagg-aaggaaggggagggatcacttttatttatttttaatcacgaacaatgtaaaatgttttttgtttt 28074256  T
Q  101 aaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    |||||| |||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  28074255 aaataaattaagtgtttttgaagtattatatgatcatttatcaggttgttaattcaattttctaaaaatcattttataatgtccgtaatttaaaaaagaa 28074156  T
Q  201 aagt 204  Q
    ||||    
T  28074155 aagt 28074152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 21857350 - 21857577
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtta 110  Q
    |||||||||||| || ||||||| ||||| |||||||   |  ||||||||||||||| ||||||| || |||| ||||||  ||||| ||||||| |||    
T  21857350 gtgtgtttggatcgaaggtttagaagggg-aagggagtagagagttcatttttattttttaaattaagaacaatataaaatccttttttaaaataaatta 21857448  T
Q  111 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatct 210  Q
    |||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||| |||||||| | ||     
T  21857449 agtgtttttgaaatattgtatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatgttcgtaat-taaaagagaaaagtaagtcc 21857547  T
Q  211 tcccttcctaaacccttcatccaaacacac 240  Q
    || | |||||||| || ||| |||||||||    
T  21857548 tctcctcctaaacactccattcaaacacac 21857577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 203
Target Start/End: Original strand, 37620771 - 37620968
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttca-tttttattttgtaaattacgagcaatgtaaaatgttttttcaaaa 103  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||| |  ||||| ||||||||||  |||||| || |||||||||||| ||||| ||||    
T  37620771 cttaaggtgtgtttggattgagggtttgggagggg-aagggaggggagagttcactttttatttt-caaattatgaacaatgtaaaatgattttttaaaa 37620868  T
Q  104 taagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    ||| |||| ||||||||||||||| ||| ||| |||||||||||| ||||| ||||||| |||||| |||||||||||||| |||| |||||||||||||    
T  37620869 taaattaaatgtttttgaagtattatataatcttttatcatgttgataattcaattttccaaaaatcattttataatgtccataatttaaaaaagaaaag 37620968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 48881793 - 48881607
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaa-taa 106  Q
    |||||||||||||||||||||||||||||||| ||||          |||| ||||| ||| |||||||| | ||| |||||||||||||| |||| |||    
T  48881793 agggtgtgtttggattgagggtttaggagggg-aagg----------ttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaaataa 48881705  T
Q  107 gttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
     |||||| ||||||||| ||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  48881704 attaagtatttttgaagcattatataatcatttatcatgttgttaattcaattttctgaaaattattttataatgtccgtaatttaaaaaagaaaagt 48881607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 31364285 - 31364094
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagg--gagggcattgttcattttt-attttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||||||||||||| | ||  |||||  |  || |||||| ||||| ||||||| || |||||||||||||||||| ||||||||    
T  31364285 gtgtgtttggattgagggtttaggaggggaagggaggagggtttactttattttttattttttaaattaggaacaatgtaaaatgtttttttaaaataag 31364186  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||  |||||||||||||||| |||||||||||   |||| ||| ||| |||||||| ||||| ||||||||||||||||||| || |||||||||||    
T  31364185 tt--gtgtttttgaagtattatatgatcattt---atgtcgttgattcaattttcttaaaatcattttataatgtccgtaatttagaaaagaaaagt 31364094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 3216048 - 3215934
Alignment:
Q  65 ttttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttcta 164  Q
    |||| ||||||| || |||||||||||||||||||||||||| | |||| ||| ||||||||| |||||||||||||||| ||||||||| |||||||||    
T  3216048 ttttttaaattatgaacaatgtaaaatgttttttcaaaataaatcaagtatttatgaagtattatatgatcatttatcatattgttaattcaattttcta 3215949  T
Q  165 aaaattattttataa 179  Q
    ||||| |||||||||    
T  3215948 aaaatcattttataa 3215934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 48015278 - 48015402
Alignment:
Q  81 caatgtaaaatgttttttca-aaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataa 179  Q
    ||||||||||||||||||   |||||| |||||||||||||||  ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  48015278 caatgtaaaatgtttttttttaaataaattaagtgtttttgaaaaattatatgatcatttatcatgttgttaattcaattttccaaaaattattttataa 48015377  T
Q  180 tgtccgtaatctaaaaaagaaaagt 204  Q
     ||| ||||| |||||| |||||||    
T  48015378 agtctgtaatttaaaaacgaaaagt 48015402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 183
Target Start/End: Original strand, 8122142 - 8122322
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||| ||||||  ||||||||| | ||||||||| |    ||| ||||||||| |||||||||| | || |||||| || ||| ||||||    
T  8122142 ttagggtgtgtttgaattgagaatttaggaggag-aagggaggggaagactcacttttattttttaaattacgaaccatataaaatattgttttaaaata 8122240  T
Q  106 agttaagtgtttttgaagtattt----tatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtc 183  Q
    | |||| |||||||||||||||     |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  8122241 aattaattgtttttgaagtattaattatatgataatttatcatcttgttaattcaattttctaaaaattattttataatgtc 8122322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 60 - 200
Target Start/End: Original strand, 3143531 - 3143675
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaatta---- 155  Q
    |||| |||| |||||||  | ||||||||||| |||||  ||||||| |||||| ||||||||||||| |||||||||||||||| ||||||||||        
T  3143531 tttttttttttaaattataaacaatgtaaaatatttttataaaataaattaagtttttttgaagtattatatgatcatttatcattttgttaattaattc 3143630  T
Q  156 aattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    |||||| |||||||||||||||||||||  |||| ||||||||||    
T  3143631 aattttttaaaaattattttataatgtcattaatttaaaaaagaa 3143675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 60 - 161
Target Start/End: Complemental strand, 12671029 - 12670928
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| |||| ||||| |||||| |||||||||||  |||| | |||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  12671029 ttttattttttaaactacgaacaatgtgaaatgttttttgtaaatgaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaatt 12670930  T
Q  160 tt 161  Q
    ||    
T  12670929 tt 12670928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 2087903 - 2087788
Alignment:
Q  93 ttttttcaaaataagttaagtgtttttgaagtattttatgatca----tttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaa 188  Q
    |||||| ||||||| || | ||||||||||||||| ||||||||    |||||||||||||||||| | |||| |||||||||||||||||| |||||||    
T  2087903 tttttttaaaataaatttaatgtttttgaagtattatatgatcaattatttatcatgttgttaattcatttttttaaaaattattttataatatccgtaa 2087804  T
Q  189 tctaaaaaagaaaagt 204  Q
    | ||||||||||||||    
T  2087803 tttaaaaaagaaaagt 2087788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 93 - 243
Target Start/End: Original strand, 48093977 - 48094127
Alignment:
Q  93 ttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatcta 192  Q
    |||||| ||||||| ||||||||  || ||||||| |||||||||||||||| || ||| || |||| | ||||||  ||||||||  || |||||| ||    
T  48093977 tttttttaaaataaattaagtgtggttaaagtattatatgatcatttatcattttattatttcaattctataaaaaagattttatagcgttcgtaattta 48094076  T
Q  193 aaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    |||||||||||| |||| |||| ||||||| ||| ||||||||||||||||    
T  48094077 aaaaagaaaagtaaatcctcccctcctaaatcctacatccaaacacaccct 48094127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 93 - 243
Target Start/End: Complemental strand, 23116420 - 23116269
Alignment:
Q  93 ttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaatta-ttttataatgtccgtaatct 191  Q
    |||||| |||| || ||||||||  |||||||||| ||| |||||||||||||||| || || |||||| ||| ||  | ||||||| |||| ||||| |    
T  23116420 tttttttaaaaaaaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaattt 23116321  T
Q  192 aaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    ||||||||||||| |  | |||||||||||||||| ||||||||||||||||    
T  23116320 aaaaaagaaaagtaagccctcccttcctaaaccctccatccaaacacaccct 23116269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 204
Target Start/End: Complemental strand, 33655354 - 33655157
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||| ||||||||||||||||||||||||||||| ||| ||||  |  ||| | |||| |||| ||||||| | || || ||| ||||||||  ||||||    
T  33655354 ttagagtgtgtttggattgagggtttaggagggg-aagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaata 33655256  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    | ||||||||  |||||||||| |||||||||||||||||||  ||  | || ||| ||||||  |||| ||| |||||||||| |||||| |||||||    
T  33655255 aattaagtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 33655157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 16833779 - 16833867
Alignment:
Q  93 ttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatg 181  Q
    |||||| |||| || ||||||||||||||||||||  |||||||||||||||||| |||||| |||||| |||||||||| ||||||||    
T  16833779 ttttttaaaaaaaaattaagtgtttttgaagtattacatgatcatttatcatgttattaattcaattttataaaaattatattataatg 16833867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 39856109 - 39855975
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||| ||||||||||||| |  ||| | |||| |||| |||||||||  | || ||| ||||||||  |||||||     
T  39856109 agggtgtgtttggattgagggtttagga-ggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaa 39856011  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatca 143  Q
    ||||||||   | ||||||| |||||||||||||||    
T  39856010 ttaagtgtgacttaagtattatatgatcatttatca 39855975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 132
Target Start/End: Complemental strand, 12682972 - 12682850
Alignment:
Q  9 gggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagt 108  Q
    ||||||||||||||||||| |||||||| |  ||  ||||| |  | ||| ||||||||| |||| ||||| ||||||||||||| ||||  |||||| |    
T  12682972 gggtgtgtttggattgaggttttaggagcga-aacagagggaaaggctcacttttattttttaaactacgaacaatgtaaaatgtattttttaaataaat 12682874  T
Q  109 taagtgtttttgaagtattttatg 132  Q
    ||||||||||||||||||| ||||    
T  12682873 taagtgtttttgaagtattatatg 12682850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 1051742 - 1051605
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||| ||||||||||||  |   || |||||| |||| |||||||||| | || |||  |||||||  |||||||     
T  1051742 agggtgtgtttggattgagggtttagga-ggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaaaataaa 1051644  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgt 146  Q
    ||||||||  |||||| ||| ||||||  ||||||||||    
T  1051643 ttaagtgtgattgaagcattatatgattgtttatcatgt 1051605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 18795842 - 18795697
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaa 103  Q
    |||||| |||||||||||||||| |||||| ||||| |  |||||| |  | |   |||| |||| |||||||||| |||| ||||||||||||| ||||    
T  18795842 tcttagagtgtgtttggattgagagtttagaaggggaa--ggaggggaaggcttgattttcttttttaaattacgaacaatataaaatgtttttttaaaa 18795745  T
Q  104 taagttaagtgtttttgaagtattttatgatcatttatcatgttgtta 151  Q
     || | ||||||| ||||| |||| || |||||||||| |||||||||    
T  18795744 caaatcaagtgttattgaattattgtacgatcatttattatgttgtta 18795697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 30592388 - 30592302
Alignment:
Q  118 ttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||| |||||| ||||||||| |  ||| || |||||| ||||||| |||||||| |||| ||||| ||||||||||||||    
T  30592388 ttgaagtattatatgattatttatcatatgattatttcaattttttaaaaatcattttatagtgtctgtaatttaaaaaagaaaagt 30592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 219
Target Start/End: Complemental strand, 24970407 - 24970199
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtt 109  Q
    |||||||||||||||||||||||||||||   | |||||| |  |||  ||||| |||| ||||||| |    || ||| ||||||||  ||||||| ||    
T  24970407 ggtgtgtttggattgagggtttaggagggttta-ggagggaagagtttgtttttcttttttaaattatggattatataacatgtttttctaaaataaatt 24970309  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatc 209  Q
    ||||||  |||||||||| ||||||| ||||||| |||  ||  | || ||| |||||| ||||| ||| | |||||||| |||||| ||||||| ||||    
T  24970308 aagtgtgattgaagtattatatgatcgtttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaagtaaatc 24970209  T
Q  210 ttcccttcct 219  Q
     |||| ||||    
T  24970208 atcccctcct 24970199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 26365765 - 26365806
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggag 47  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  26365765 ttagagtgtgtttggattgagggtttaggagggggaagggag 26365806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 245
Target Start/End: Original strand, 17852879 - 17853106
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||||||| ||||||||||||||||||||  |||||         | | |||| |||| |||||||||    |  ||| ||||||||  ||||||    
T  17852879 ttagggtgtgtttagattgagggtttaggagggg--aggga---------ttacttttcttttttaaattacggattaaataacatgtttttctaaaata 17852967  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtt 205  Q
    | ||||||||  |||| ||||| ||||||| ||||||||||||||| || |  ||| |||||| | ||| ||| ||  |||||| |||||| |||||||     
T  17852968 aattaagtgtgattgaggtattatatgatcgtttatcatgttgttattttatctttttaaaaact-tttcatagtgctcgtaatttaaaaatgaaaagta 17853066  T
Q  206 aatcttcccttcctaaacccttcatccaaacacaccctta 245  Q
    |  | |||| ||||||||||| ||||||||||||||||||    
T  17853067 agccctcccctcctaaaccctccatccaaacacaccctta 17853106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 7791796 - 7791894
Alignment:
Q  86 taaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtcc 184  Q
    ||||| ||||||| || |||| |||| |||  || ||||||| |||||| |||||||||||| ||| || ||||||| ||||| ||||||||| |||||    
T  7791796 taaaacgtttttttaacataaattaaatgtgatttaagtattatatgattatttatcatgtttttatttcaattttcaaaaaagtattttatagtgtcc 7791894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 18063721 - 18063667
Alignment:
Q  93 ttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||||| ||||||| ||||||||  |||||||||| |||||||||||||||||||    
T  18063721 tttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 18063667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 144
Target Start/End: Original strand, 25887190 - 25887327
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||||||||||||||||||||| || ||||||||||||| |   ||  ||||| |||| ||||| |||  | || ||| ||||||||  ||||||    
T  25887190 ttagggtgtgtttggattgagggtttatga-ggggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaata 25887288  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcat 144  Q
    | ||||||||  ||| |||||| ||||||  ||||||||    
T  25887289 aattaagtgtgattggagtattatatgattgtttatcat 25887327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 36267548 - 36267593
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  36267548 ttcttagggtgtgtttggatggagggtttagga-ggggaagggaggg 36267593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37417874 - 37417836
Alignment:
Q  1 ttttcttagggtgtgtttggattgagggtttaggagggg 39  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  37417874 ttttctaagggtgtgtttggattgagggtttaggagggg 37417836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 147
Target Start/End: Complemental strand, 41497172 - 41497063
Alignment:
Q  38 gggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcat 137  Q
    |||||||||||| |  ||| | |||| |||| |||||||||  | || ||| ||||||||  ||||||| ||||||||  |||||| ||| |||||||||    
T  41497172 gggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcat 41497073  T
Q  138 ttatcatgtt 147  Q
    ||||||||||    
T  41497072 ttatcatgtt 41497063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 202
Target Start/End: Original strand, 47390853 - 47391049
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||||||||||||||||| |||||| ||||||||||| | |  ||| | |||| |||| ||||||| || | || ||| ||||||||  ||||||    
T  47390853 ttagggtgtgtttggattgaggggttagga-ggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaata 47390951  T
Q  106 agttaagtgtttttgaagtattttatga-tcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
      |||| |||  |||||||||| ||||| |  |||||||||||  ||  | ||  || |||||| | ||||||| |||||||||| |||||| |||||    
T  47390952 cattaattgtgattgaagtattatatgacttgtttatcatgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaa 47391049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 33519295 - 33519252
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||| |||||||||||| |||||||||||||    
T  33519295 cttagggtgtgtttggatggagggtttagga-ggggaagggaggg 33519252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 41496954 - 41496997
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||| |||||||||||| |||||||||||||    
T  41496954 cttagggtgtgtttggatggagggtttagga-ggggaagggaggg 41496997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 48881556 - 48881627
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacg 78  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| || | | | |||| |||| |||||||||    
T  48881556 ttagggtgtgtttggatggagggtttagga-ggggaagggaggggatggcttacttttcttttttaaattacg 48881627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 13770946 - 13770988
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  13770946 ttagggtgtgtttggattgaggatttagga-ggggaagggaggg 13770988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 13771190 - 13771084
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||| |||||||||||||||| ||||||||||||  |  ||| | ||||  ||| |||||||||  | || ||| ||||||||| |||||||     
T  13771190 agggtgtgtttagattgagggtttagga-ggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataaa 13771092  T
Q  108 ttaagtgt 115  Q
    ||||||||    
T  13771091 ttaagtgt 13771084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 40282193 - 40282228
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||| ||||||||||||||||||||||||||    
T  40282193 tcttagggtatgtttggattgagggtttaggagggg 40282228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 22163273 - 22163215
Alignment:
Q  89 aatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||||||||  ||||||| ||||||||  |||||||||| ||||||| |||||||||||    
T  22163273 aatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 22163215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 22221981 - 22221923
Alignment:
Q  89 aatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||||||||  ||||||| ||||||||  |||||||||| ||||||| |||||||||||    
T  22221981 aatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 22221923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 31571713 - 31571683
Alignment:
Q  9 gggtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||||||||||||||    
T  31571713 gggtgtgtttggattgagggtttaggagggg 31571683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 28074103 - 28074143
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  28074103 agggtgtgtttggattgaaggtttagga-ggggaagggaggg 28074143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 37417793 - 37417740
Alignment:
Q  94 tttttcaaaat-aagttaagtgtttttgaagtattttatgatcatttatcatgt 146  Q
    ||||||||||| |||||||||||  |||||||||| ||||||| ||||||||||    
T  37417793 tttttcaaaattaagttaagtgtgattgaagtattatatgatcgtttatcatgt 37417740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 38749576 - 38749605
Alignment:
Q  6 ttagggtgtgtttggattgagggtttagga 35  Q
    ||||||||||||||||||||||||||||||    
T  38749576 ttagggtgtgtttggattgagggtttagga 38749605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 48881735 - 48881796
Alignment:
Q  185 gtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacacccttaa 246  Q
    ||||| ||||||  |||||| || |||||| |||||||||||  ||||||||||||||||||    
T  48881735 gtaatttaaaaattaaaagtgaaccttcccctcctaaaccctcaatccaaacacacccttaa 48881796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18231837 - 18231790
Alignment:
Q  1 ttttcttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||| ||||||||||||||| ||| |||||||| |||||||||||||    
T  18231837 ttttctaagggtgtgtttggatggagcgtttagga-ggggaagggaggg 18231790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 37417805 - 37417869
Alignment:
Q  181 gtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccctta 245  Q
    |||||| || |||||| ||||||| || | |||| |||||||||||  |||||||||||||||||    
T  37417805 gtccgttatttaaaaatgaaaagtaaaccatcccctcctaaaccctcaatccaaacacaccctta 37417869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 39
Target Start/End: Complemental strand, 42306571 - 42306543
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||||||||||||    
T  42306571 gtgtgtttggattgagggtttaggagggg 42306543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 48152191 - 48152227
Alignment:
Q  210 ttcccttcctaaacccttcatccaaacacacccttaa 246  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  48152191 ttccctttctaaacctttcatccaaacacacccttaa 48152227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 40858616 - 40858798
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  40858616 ttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgttgttaattcaatt 40858715  T
Q  160 ttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccc 242  Q
    ||| ||| || ||||||||||||||||||| |||||||||||| | || | |||| ||||||||||| |||||||||||||||    
T  40858716 ttcaaaagatcattttataatgtccgtaatttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaacacaccc 40858798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 24253716 - 24253922
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttaggagggggaagggagggc-attgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaa 101  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||  | |||||| ||||| ||| ||||||| ||||||||||||||  ||||| ||    
T  24253716 ttctaagggtgtgtttggattgagggtttaggaggga-aagggagggggagtgttcacttttaatttttaaattatgagcaatgtaaaataattttttaa 24253814  T
Q  102 aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaa 201  Q
    ||||| ||||||||||||||||| || ||| |||||||||||||||||||||| || ||||||||| | ||||||||||||||||||| |||||||||||    
T  24253815 aataaattaagtgtttttgaagtgttatataatcatttatcatgttgttaattcaactttctaaaactcattttataatgtccgtaatttaaaaaagaaa 24253914  T
Q  202 agttaatc 209  Q
    ||| ||||    
T  24253915 agtaaatc 24253922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 12 - 204
Target Start/End: Complemental strand, 17474446 - 17474255
Alignment:
Q  12 tgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaa 111  Q
    ||||||||||||||||||| |||||||| ||||||||| |  ||| | ||||||||| ||||||||||  |||||||||| |||||| ||||||| ||||    
T  17474446 tgtgtttggattgagggttgaggagggg-aagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaataaattaa 17474348  T
Q  112 gtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||||||| | |||| ||||||||| ||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  17474347 gtgtttttgaagtattatttgattatttatcatattgttaattcaatttttaaaaaattattttataatgtccgtaatttaaaaaagaaaagt 17474255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 34641000 - 34641185
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||||||||||||||||||||||||||||      |||||     ||| ||||||||| |||||||||| |||||||||| | ||||| ||||||    
T  34641000 ttagggtgtgtttggattgagggtttaggagggg------agggc-----tcacttttattttttaaattacgaacaatgtaaaaggattttttaaaata 34641088  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  |||| ||||||||||||||||||| ||||||||||||||    
T  34641089 aattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttct--aaatcattttataatgtccgtaatttaaaaaagaaaagt 34641185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 41414078 - 41414313
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||| ||||| |||||||||||||||||||  ||||||||| |  | ||| ||||||||| ||||||| || ||| |||||||||||||| |||||||     
T  41414078 agggtatgtttagattgagggtttaggaggga-aagggaggggagggctcacttttattttttaaattatgaacaaggtaaaatgtttttttaaaataaa 41414176  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatct-aaaaaagaaaagtta 206  Q
    | ||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||| |||||||||||||| | || | ||||||||||||| |    
T  41414177 tcaagcgtttttgaagtattatatgatcatttatcatgttgttaactcaattttctaaaaatcattttataatgtccctgatttaaaaaaagaaaagtaa 41414276  T
Q  207 atcttcccttcctaaacccttcatccaaacacaccct 243  Q
    |   |||| ||||||||||  ||||||||||||||||    
T  41414277 acactcccctcctaaacccaccatccaaacacaccct 41414313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 26135807 - 26135992
Alignment:
Q  13 gtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaag 112  Q
    ||||||||||||||||||||||| | | |||||||| |     ||| ||||||||| ||||||| || |||||||||||||||||| ||||||| |||||    
T  26135807 gtgtttggattgagggtttaggaagag-aagggaggac-----tcacttttattttttaaattatgaacaatgtaaaatgttttttaaaaataaattaag 26135900  T
Q  113 tgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||||||||||| ||| || ||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  26135901 tgtttttgaagtattatataattatttatcatattgttaattcaattttcaaaaaattattttataatgtccgtaatttaaaaaagaaaagt 26135992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 48683663 - 48683848
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatc-atgttgttaattaaat 158  Q
    ||||||||  |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||| |||    
T  48683663 ttttatttcttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaatattatatgatcatttatcaatgttgttaattcaat 48683762  T
Q  159 tttctaaaaattattttataatgtccgtaatctaaaaaag-aaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    || |||||||| |||||||||||| |||||| |||||||| |||| | || | |||| |||||||||||  |||||||||||||||    
T  48683763 ttcctaaaaatcattttataatgttcgtaatttaaaaaagaaaaaataaaccctcccctcctaaaccctctatccaaacacaccct 48683848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 10943852 - 10943655
Alignment:
Q  14 tgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagt 113  Q
    ||||||||||||||||||| |||||  ||| ||||| |  ||||| ||||| ||| |||||||||| ||||| |||||||||||| ||||||| ||||||    
T  10943852 tgtttggattgagggtttatgaggga-aagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagt 10943754  T
Q  114 gtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttc 212  Q
    |||||||||||||| ||| || |||||| |||||||||||| |||||||||||||| |||||||||| ||  |||| |||||||||||| | |||||||    
T  10943753 gtttttgaagtattatataattatttattatgttgttaattcaattttctaaaaatcattttataatatctataatttaaaaaagaaaattaaatcttc 10943655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 44412361 - 44412556
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||| ||||||||||||||||||| ||| ||||| |    ||||||||  ||| |||||||||| ||||||||||  |||||| |||||||     
T  44412361 agggtgtgtttgaattgagggtttaggagggg-aagagaggggaggactcattttttatttttaaattacgaacaatgtaaaacatttttttaaaataaa 44412459  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| |||||| |||||| | ||| |||||| ||||||| ||||||    
T  44412460 ttaagtgtttttgaagtattatatgatgatttatcatgttgttaattcaattttcaaaaaatcattttacattgttcgtaatttaaaaaataaaagt 44412556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 100 - 243
Target Start/End: Original strand, 42772123 - 42772266
Alignment:
Q  100 aaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaaga 199  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| | || |||     
T  42772123 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaattttcaaaaaatcattttataatgtccgtaattttaagaagc 42772222  T
Q  200 aaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    ||||| || |||||| ||||||||||| ||| ||||||||||||    
T  42772223 aaagtaaaccttcccctcctaaaccctccattcaaacacaccct 42772266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 21090312 - 21090129
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtta 110  Q
    ||||||||||||||| |||||||||| || ||||||||  |    ||| ||||||||| ||||||| || ||||||||||| |||||| ||||||| |||    
T  21090312 gtgtgtttggattgatggtttaggagagg-aagggaggagaggactcacttttattttttaaattatgaacaatgtaaaatatttttttaaaataaatta 21090214  T
Q  111 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaa 195  Q
    ||||||||||||||||| |||||| || |||||||||||||||| ||||||| ||||||  ||||||||| || ||||| |||||    
T  21090213 agtgtttttgaagtattatatgataatatatcatgttgttaattcaattttcaaaaaatcgttttataatatctgtaatttaaaa 21090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 42699795 - 42699669
Alignment:
Q  70 taaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaat 169  Q
    |||||||||| |||| |||||| |||||  ||||||| |||||||||||||||||||| |||||||||||||||| ||| ||||| |||||||||||| |    
T  42699795 taaattacgaacaatataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatcatattgataattcaattttctaaaatt 42699696  T
Q  170 tattttataatgtccgtaatctaaaaa 196  Q
    ||||||||||||||| |||| ||||||    
T  42699695 tattttataatgtccataatttaaaaa 42699669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 18086218 - 18086029
Alignment:
Q  20 gattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttca-----aaataagttaagtg 114  Q
    ||||||||||||| |||||| | ||||||| |  | ||| | ||||||| |||||||| | ||||||||| ||||||||       |||||| |||||||    
T  18086218 gattgagggtttatgagggg-atgggagggtaaggctcactattattttttaaattactaacaatgtaaattgttttttttttctcaaataaattaagtg 18086120  T
Q  115 tttttgaagtattttatgatcattt-atcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||||||||||  ||||||||||||| ||||| ||||||||||||||    
T  18086119 tttttgaagtattttatgatcattttattatgttgttaattcaattttctaaaaaacattttataatgtctgtaatttaaaaaagaaaagt 18086029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 46978472 - 46978594
Alignment:
Q  54 gttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaat 153  Q
    ||||| ||||| ||| |||||||||| |  ||||||||||||||| ||||||| |||| ||||||||||||||| ||| |||||||||||||||||||||    
T  46978472 gttcacttttaatttttaaattacgaacggtgtaaaatgtttttttaaaataaattaaatgtttttgaagtattatataatcatttatcatgttgttaat 46978571  T
Q  154 taaattttctaaaaattatttta 176  Q
    |||||||| ||||||| ||||||    
T  46978572 taaattttataaaaatcatttta 46978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 16884209 - 16884047
Alignment:
Q  14 tgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagt 113  Q
    ||||||||||||||||||||||| || |||||| |  |    ||| ||||||||| ||| |||||| ||||||||||||| |||| ||||||| ||||||    
T  16884209 tgtttggattgagggtttaggagagg-aagggatgataagactcacttttattttttaagttacgaacaatgtaaaatgtctttttaaaataaattaagt 16884111  T
Q  114 gtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttata 178  Q
    |||||||||||||| |||||||||||||||||||||| ||| |||||| ||||| || |||||||    
T  16884110 gtttttgaagtattatatgatcatttatcatgttgtt-attcaattttttaaaattttttttata 16884047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 8432458 - 8432323
Alignment:
Q  54 gttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaat 153  Q
    ||||| ||||| ||| |||| ||||| ||||| |||||||||||| ||||| | |||||||||||||||||||| ||  || ||||||||||||||||||    
T  8432458 gttcaattttaatttttaaactacgaacaatgaaaaatgtttttttaaaatgaattaagtgtttttgaagtattataaaattatttatcatgttgttaat 8432359  T
Q  154 taaattttctaaaaattattttataatgtccgtaat 189  Q
    | |||||| ||||||| ||||||||||||| |||||    
T  8432358 tcaattttgtaaaaatcattttataatgtctgtaat 8432323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 81 - 195
Target Start/End: Original strand, 36727249 - 36727362
Alignment:
Q  81 caatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataat 180  Q
    |||||||||||||| ||| ||||||| | |||||||||||||||||| |||||| ||||||||||||||||| | |||||||| ||||||||||||||||    
T  36727249 caatgtaaaatgttcttttaaaataaat-aagtgtttttgaagtattatatgataatttatcatgttgttaagttaattttcttaaaattattttataat 36727347  T
Q  181 gtccgtaatctaaaa 195  Q
    || |||||| |||||    
T  36727348 gttcgtaatttaaaa 36727362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 27197842 - 27197734
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| |||||||||| |||||||| || |||||| ||||||| |||||| | ||| ||||||| ||||||||| |||||||||||||||| ||||    
T  27197842 ttttattttttaaattacgaacaatgtaacatatttttttaaaataaattaagtatatttaaagtattatatgatcatctatcatgttgttaattcaatt 27197743  T
Q  160 ttctaaaaa 168  Q
    |||||||||    
T  27197742 ttctaaaaa 27197734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 24560210 - 24560412
Alignment:
Q  1 ttttcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttca 100  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||| |  |||  ||||| |||| |||||||||  | |||||| ||||||||  |    
T  24560210 ttttctaagggtgtgtttggattaagggtttaggagggg-aagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttcta 24560308  T
Q  101 aaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    |||||| |||| |||  |||||||||| ||||||| |||||||||||  ||  | || ||| ||||||  |||| ||| |||| ||||| |||||| |||    
T  24560309 aaataaattaaatgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaa 24560408  T
Q  201 aagt 204  Q
    ||||    
T  24560409 aagt 24560412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 54985943 - 54985744
Alignment:
Q  14 tgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagt 113  Q
    |||||||||||||||||||| ||||| ||| || |  |   ||| |||| ||||| |||||||| |  ||||||||||||| ||||||||||| ||||||    
T  54985943 tgtttggattgagggtttagaagggg-aagagatgagagaattcgttttaattttttaaattacaactaatgtaaaatgttctttcaaaataaattaagt 54985845  T
Q  114 gttttt-----gaagtattttatgatcatt-------tatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaa 201  Q
    ||||||     |||||||| ||||||||||       |||||| ||||||||| |||||||||||||| | ||||||||||||||||| |||||| ||||    
T  54985844 gttttttttttgaagtattatatgatcattattcatttatcatattgttaattcaattttctaaaaatcaatttataatgtccgtaatttaaaaacgaaa 54985745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 55428492 - 55428584
Alignment:
Q  122 agtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttccc 214  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||||| || || ||||||||||||| |||| ||||||||| |||| ||||    
T  55428492 agtattatatgatcatttatcacgttgttaattcaattttctaaaaatcatcttgtaatgtccgtaatttaaagaagaaaagtaaatcatccc 55428584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 21773782 - 21774016
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||| |||||||||||| ||||||||||||| |||||| || |  ||  | |||| |||| |||||||||  | || ||| ||||||||  |||||||     
T  21773782 agggtatgtttggattgaaggtttaggagggg-aagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaataaa 21773880  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaa 207  Q
    ||||||||  |||||| ||| ||||||  ||||||||||   ||  | || ||| ||||||  ||||  || ||| |||||| ||||||  |||||| ||    
T  21773881 ttaagtgtgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaa 21773980  T
Q  208 tcttcccttcctaaacccttcatccaaacacaccct 243  Q
     | |||| ||||||||||||||||||||||||||||    
T  21773981 ccctcccctcctaaacccttcatccaaacacaccct 21774016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 220643 - 220405
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||| ||||||||| |||||||||||||| | ||||||||| |   || | |||| |||| |||||||||  | |||||| ||||||||  ||||||    
T  220643 ttagggtctgtttggatggagggtttaggaggag-aagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaata 220545  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtt 205  Q
    | | |||| |  ||||||| || || |||  ||||| |||||  ||  | || ||| ||||||  |||| |||||||||||||| |||||| ||||| |     
T  220544 aatcaagtatgattgaagtgttataagattgtttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaacta 220445  T
Q  206 aatcttcccttcctaaacccttcatccaaacacacccttaa 246  Q
    || || |||| |||||||||| |||||||| ||||||||||    
T  220444 aacctcccct-cctaaaccctccatccaaatacacccttaa 220405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 37102385 - 37102156
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttc-aaaat 104  Q
    |||||||||||||||||||||||||||||| |||||||          ||| | || | |||| |||||||||  | || ||| |||||||||| |||||    
T  37102385 ttagggtgtgtttggattgagggtttagga-ggggaag----------gtttacttatcttttttaaattacggactatataacatgttttttctaaaat 37102297  T
Q  105 aagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    || | ||||||  |||||||||| |||||||  |||| |||||  ||  | || ||| ||||||  |||| ||| |||||||||| |||||| ||||| |    
T  37102296 aaatcaagtgtggttgaagtattatatgatc-gttattatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaact 37102198  T
Q  205 taatcttcccttcctaaacccttcatccaaacacacccttaa 246  Q
     || | |||| ||||||||||| |||||||||||||||||||    
T  37102197 aaaccctcccctcctaaaccctccatccaaacacacccttaa 37102156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 18654842 - 18654706
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgt-aaattacgagcaatgtaaaatgttttttcaaaataagtt 109  Q
    ||||||||| ||||||||||||||||||| ||||||||| |  |||  ||||  |||| | ||||||||  | || ||| |||||| |  ||||||| ||    
T  18654842 gtgtgtttgaattgagggtttaggagggg-aagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaataaatt 18654744  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||||||  |||||||||| |||||||||||||||||||    
T  18654743 aagtgtaattgaagtattatatgatcatttatcatgtt 18654706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 41110565 - 41110370
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||||||||  |||||| ||||||| | |  ||| | ||||  ||| |||||||||  | |  ||| ||||||||  |||||||     
T  41110565 agggtgtgtttggattgagggtttgtgagggg-aagggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataaa 41110467  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||||  |||||||||| ||||||  |||||||||||  ||  | || ||| || ||| ||||| ||| |||||||||| |||||| |||||||    
T  41110466 ttaagtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaagt 41110370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 187
Target Start/End: Complemental strand, 45663337 - 45663211
Alignment:
Q  59 tttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaat 158  Q
    ||||| |||| | |||||||  |||| |||||| |||||| ||||||| |||  |||  |||||||||| || |||||||||||||||||||| || |||    
T  45663337 ttttttttttttcaattacggacaatataaaatatttttt-aaaataaattatatgtgattgaagtattataagatcatttatcatgttgttatttcaat 45663239  T
Q  159 tttctaaaaattattttataatgtccgta 187  Q
    |||| ||||| ||||||||| ||| ||||    
T  45663238 tttc-aaaaaatattttatagtgttcgta 45663211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 30200339 - 30200098
Alignment:
Q  8 agggtgtgtttggattgaggg----tttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaa 103  Q
    |||||||||||||||||||||    | ||||||||| ||||||||| |  ||| | |||| |||| |||||||||  | || ||| ||||||||  ||||    
T  30200339 agggtgtgtttggattgagggagggtataggagggg-aagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttctaaaa 30200241  T
Q  104 taagttaagtgtttttgaagtattttatgatcatttatcatgttgttaat---taaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
    ||| | ||||||  || ||||| | ||||||| ||  | ||  |||||||   |||| ||| ||||||  |||| ||| |||||||||| |||||| |||    
T  30200240 taaatcaagtgtgattaaagtactatatgatcgttgtttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaa 30200141  T
Q  201 aagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    || | || | |||| ||||||||||| ||||||||||||||||    
T  30200140 aactaaaccctcccctcctaaaccctccatccaaacacaccct 30200098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 37102321 - 37102383
Alignment:
Q  181 gtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    ||||||||| ||||||||| |||| || |||||| |||||||||||  |||||||||||||||    
T  37102321 gtccgtaatttaaaaaagataagtaaaccttcccctcctaaaccctcaatccaaacacaccct 37102383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 651740 - 651773
Alignment:
Q  8 agggtgtgtttggattgagggtttaggaggggga 41  Q
    ||||||||||||||||||||||||||||||||||    
T  651740 agggtgtgtttggattgagggtttaggaggggga 651773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 28582755 - 28582615
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||| |  ||| | |||| |||| |||||||||  | || ||| ||||||||  || |||    
T  28582755 ttagggtgtgtttggactgaggatttagga-ggggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagata 28582657  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | | ||||||  |||||||||| ||| ||| ||||| |||||    
T  28582656 aatcaagtgtggttgaagtattatattatcgtttattatgtt 28582615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 30200093 - 30200129
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30200093 ttcttagggtgtgtttggatggagggtttaggagggg 30200129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 44412603 - 44412516
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgtttttt 98  Q
    |||||||||||||||| |||||  |||||| ||||||||| |    ||| ||||||||| |||||||||| |||||||||||| |||||    
T  44412603 ggtgtgtttggattgatggtttgtgagggg-aagggaggggaggactcacttttattttttaaattacgaacaatgtaaaatgattttt 44412516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 24560465 - 24560430
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24560465 tcttagggtgtgtttggatggagggtttaggagggg 24560430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 35
Target Start/End: Complemental strand, 54574604 - 54574573
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttagga 35  Q
    ||||||||||||||||||||||||||||||||    
T  54574604 tcttagggtgtgtttggattgagggtttagga 54574573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42699853 - 42699815
Alignment:
Q  1 ttttcttagggtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  42699853 ttttcttagggtgtttttggatcgagggtttaggagggg 42699815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 46204884 - 46205017
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||| ||||||||||| |||||||||| ||| | ||| || |  | |||| | |||| |||| ||||||| || | || ||| ||||||||  ||||||    
T  46204884 ttaggatgtgtttggatcgagggtttagcaggag-aagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaata 46204982  T
Q  106 agttaagtgtttttgaagtattttatgatcattta 140  Q
    | ||||||||  |||||||||| ||||||||||||    
T  46204983 aattaagtgtgattgaagtattatatgatcattta 46205017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 34641234 - 34641194
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  34641234 agggtgtgtttggatggagggtttagga-ggggaagggaggg 34641194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 48683850 - 48683817
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||| ||||||||||||||||    
T  48683850 ttagggtgtgtttggatagagggtttaggagggg 48683817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 55428619 - 55428583
Alignment:
Q  12 tgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||||| |||||||||||||    
T  55428619 tgtgtttggattgagggtttagga-ggggaagggaggg 55428583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 5962014 - 5961982
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggaggg 38  Q
    |||||||||||||| ||||||||||||||||||    
T  5962014 ttagggtgtgtttgtattgagggtttaggaggg 5961982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 18654598 - 18654630
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggaggg 38  Q
    ||||||||||||||||| |||||||||||||||    
T  18654598 ttagggtgtgtttggatggagggtttaggaggg 18654630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 24560251 - 24560215
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacaccctta 245  Q
    |||||| |||||||||||| |||||||||||||||||    
T  24560251 cttcccctcctaaacccttaatccaaacacaccctta 24560215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 27542172 - 27542037
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtta 110  Q
    ||||| |||||| ||||||||| |||||| | ||||||| |  |||  ||||| |||| ||||||| || | || ||| || |||||  ||||||| |||    
T  27542172 gtgtgattggatcgagggtttacgaggggca-gggaggggagagtttgtttttcttttttaaattatgaactatataacatatttttctaaaataaatta 27542074  T
Q  111 agtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | |||  |||||||||| ||||||| |||||||||||    
T  27542073 actgtgattgaagtattatatgatcgtttatcatgtt 27542037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 34641200 - 34641236
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacaccctta 245  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  34641200 cttcccctcctaaaccctccatccaaacacaccctta 34641236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 42772271 - 42772235
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||| || ||||||||||||||||    
T  42772271 ttcttagggtgtgtttgaatggagggtttaggagggg 42772235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 9e-55; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 45257307 - 45257502
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||| |||||||||||| |||| |||| |    ||| ||||||||| |||||||||| |||||||||||||||| | |||||||     
T  45257307 agggtgtgtttggattgagagtttaggaggggaaaggaaggg-aggactcacttttattttataaattacgaacaatgtaaaatgttttcttaaaataaa 45257405  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||| |||||||||| |||||||| ||||||||||||||    
T  45257406 ttaagtgtttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttataatatccgtaatttaaaaaagaaaagt 45257502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 6 - 204
Target Start/End: Complemental strand, 42296549 - 42296352
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||||||||||||||||| |||||||||| ||||||||  |  ||||| ||||||||| |||||||||| | ||||||||| |||||| |||||     
T  42296549 ttagggtgtgtttggattgagggattaggagggg-aagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatg 42296451  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    | |||||||||||| || |||| ||||||||||||| |||||||||||| | |||||||||| | |||||||||| |||||||| ||||||||||||||    
T  42296450 aattaagtgtttttaaattattatatgatcatttattatgttgttaattcatttttctaaaattcattttataatatccgtaatttaaaaaagaaaagt 42296352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 31061359 - 31061565
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||| ||||||||||||| ||||  ||| |  | ||| ||||||||| |||||||||| ||||||||||||| |||| |||||||     
T  31061359 agggtgtgtttggattgaaggtttaggaggggaaaggatggg-agggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataaa 31061457  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatct-aaaaaagaaaagtta 206  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||| | | ||||||||||| ||||| | ||||||||||||| |    
T  31061458 ttaagtgtttttgaaatattatatgatcatttatcatgttgttaattcaattttcaaaaagtcactttataatgtctgtaatttaaaaaaagaaaagtaa 31061557  T
Q  207 atcttccc 214  Q
    ||| ||||    
T  31061558 atcctccc 31061565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 1053000 - 1052793
Alignment:
Q  9 gggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttca-aaataag 107  Q
    |||||| ||||||||||| ||||||||| ||||| |||| | |  | ||| ||||||||| |||||||||| ||||||||||||||||||   ||||||     
T  1053000 gggtgtatttggattgagagtttaggagcgggaaaggagaggagagctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaa 1052901  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatct-aaaaaagaaaagtta 206  Q
    |||| |||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||  |||| | ||||||||||||| |    
T  1052900 ttaaatgtttttgaaatattatacgatcatttatcatgttgttaattcaattttctaaaaattattttataatatcgataatttaaaaaaagaaaagtaa 1052801  T
Q  207 atcttccc 214  Q
    ||||||||    
T  1052800 atcttccc 1052793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 33265615 - 33265838
Alignment:
Q  16 tttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgt 115  Q
    |||||||||||||||||||||||| ||||||||  ||   ||||||||||||| |||||||||| ||||||||||  |||||| ||||||| ||||||||    
T  33265615 tttggattgagggtttaggagggg-aagggaggcgatgactcatttttattttttaaattacgaacaatgtaaaacatttttt-aaaataaattaagtgt 33265712  T
Q  116 ttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaat-cttccc 214  Q
    |||||||||||| |||||||||||||||| ||||||||| ||||||| |||||| |||||| | ||| | |||| ||||||| |||||  | | || |||    
T  33265713 ttttgaagtattatatgatcatttatcatattgttaattcaattttcaaaaaatcattttacattgttcataatttaaaaaataaaagcgagtcctcccc 33265812  T
Q  215 ttcctaaacccttcatccaaacacac 240  Q
    ||||||||||||  ||||||| ||||    
T  33265813 ttcctaaaccctcaatccaaatacac 33265838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 189
Target Start/End: Original strand, 34187575 - 34187757
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||| ||||||||| || |||| |||| |  ||||| ||||| ||| |||||||||| ||| |||| ||||||| | |||||||     
T  34187575 agggtgtgtttggattgagagtttaggagtgg-aaggaaggggaaggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataaa 34187673  T
Q  108 ttaagtgtttttgaagtattttatg--atcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaat 189  Q
    |||||||||||||||||||| |||   |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  34187674 ttaagtgtttttgaagtattatatataatcatttatcatgttgttaattcaattttctaaaaatcattttataatgtccataat 34187757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 15085894 - 15085751
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaa-taagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaat 158  Q
    ||||||||| |||||||||| |||| |||||| |||||| |||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||| |||    
T  15085894 ttttattttttaaattacgaacaatataaaatattttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatcaagttgttaattcaat 15085795  T
Q  159 tttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
    ||||||||||| ||||||||||||||||||| | ||||| ||||    
T  15085794 tttctaaaaatcattttataatgtccgtaattttaaaaaaaaaa 15085751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 3094595 - 3094407
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtt 109  Q
    |||||||||||||||||||||||||| ||  ||||||||| |    ||| ||||||||| |||||||| | | |||||||||||||||  ||||||| ||    
T  3094595 ggtgtgtttggattgagggtttaggaagga-aagggaggggaagactcacttttattttttaaattacaaactatgtaaaatgtttttctaaaataaatt 3094497  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaaga 199  Q
      |||||||||||||||| |||||| ||||||||||||||||||| |||||||||| ||| ||||||||| || |||||| |||||||||    
T  3094496 tcgtgtttttgaagtattatatgattatttatcatgttgttaattcaattttctaagaatcattttataacgttcgtaatttaaaaaaga 3094407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 2381231 - 2381060
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||| ||||||||| ||||||| |||||  | ||||||| |  ||||| ||||||||| |||||||||| |||||||||||||||||| |||||||     
T  2381231 agggtgtatttggattgtgggtttatgaggga-atgggaggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaa 2381133  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataat 180  Q
    |||||||||||||||||||| ||| |||||  |||||||||| |||| |||||||||||| | ||||||||||    
T  2381132 ttaagtgtttttgaagtattatatcatcatcaatcatgttgtcaattcaattttctaaaattcattttataat 2381060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 60 - 203
Target Start/End: Original strand, 35325318 - 35325463
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgt--tttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaa 157  Q
    ||||||||| | |||||||| ||||||||||| |  ||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||| |||||| ||    
T  35325318 ttttatttttttaattacgaacaatgtaaaatatatttttttaaaataaattaagtatttttgaagtattatatgatcatttatcatgttattaattcaa 35325417  T
Q  158 ttttctaaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    |||| |||||||||||||||||||||  |||| |||||| ||||||    
T  35325418 ttttttaaaaattattttataatgtcgttaatttaaaaaggaaaag 35325463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 45098220 - 45098355
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| || ||||| |  |||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  45098220 ttttattttttacattacaaataatgtaaaatgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgttgttaattcaatt 45098319  T
Q  160 ttctaaaaattattttataatgtccgtaatctaaaa 195  Q
    ||  |||||  ||||||||||||| ||||| |||||    
T  45098320 tttcaaaaaccattttataatgtctgtaatttaaaa 45098355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 21502084 - 21502226
Alignment:
Q  61 tttattttgtaaattacgagcaatgtaaaatgttttttc--aaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaat 158  Q
    |||||||| |||||||||| |||| |||||| ||||||   ||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||  |||    
T  21502084 tttatttt-taaattacgaacaatataaaatattttttttaaaaataaattaagtgtttttgaagtattatatgaccatttatcttgttgttaatgcaat 21502182  T
Q  159 tttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||    
T  21502183 tttcttaaaattattttataatatccgtagtttaaaaaagaaaa 21502226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 36052260 - 36052105
Alignment:
Q  82 aatgtaaaatgtt-ttttcaaaataa-gttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataa 179  Q
    |||||||||| || |||| ||||||| || |||||||||||||||||  ||||||||| ||| |||||||||||| |||||||||||||| |||||||||    
T  36052260 aatgtaaaatattcttttaaaaataaagtaaagtgtttttgaagtatcatatgatcatgtatgatgttgttaattcaattttctaaaaatcattttataa 36052161  T
Q  180 tgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaa 235  Q
    |||  ||||| ||||| |||||||| | || |||| |||||||  || ||||||||    
T  36052160 tgtatgtaatttaaaatagaaaagtaagtcgtcccctcctaaattctccatccaaa 36052105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 111 - 201
Target Start/End: Complemental strand, 8554441 - 8554351
Alignment:
Q  111 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaa 201  Q
    ||||||||||||||||| || |||||||||||||| |||||||| ||||||  |||||||||||||||||||||||||| | |||||||||    
T  8554441 agtgtttttgaagtattgtacgatcatttatcatgatgttaattcaatttttaaaaaattattttataatgtccgtaatttgaaaaagaaa 8554351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 31928286 - 31928121
Alignment:
Q  15 gtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttca-----aaataagtt 109  Q
    |||||||| |||||||||||||||| |||||| || |  | ||| ||||| ||| |||||||| | ||||||||||||||||||       |||||| ||    
T  31928286 gtttggatcgagggtttaggagggg-aagggaagggagggctcacttttaatttttaaattacaaacaatgtaaaatgtttttttttttttaaataaatt 31928188  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattatttta 176  Q
    |||||||||||||||||| ||||||||||||||||||| |||||| ||||||  |||||| ||||||    
T  31928187 aagtgtttttgaagtattatatgatcatttatcatgttattaattcaattttaaaaaaatcatttta 31928121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 245
Target Start/End: Original strand, 42813726 - 42813866
Alignment:
Q  115 tttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtta-------- 206  Q
    ||||| ||||||| |||||| |||||||| |||||||||| |||||||||||||| |||||||||||| |||||| |||||||||||| | |            
T  42813726 tttttaaagtattatatgattatttatcaggttgttaattcaattttctaaaaatcattttataatgttcgtaatttaaaaaagaaaaataagccatccc 42813825  T
Q  207 --atcttcccttcctaaacccttcatccaaacacaccctta 245  Q
       ||||||| ||||||||||||||||||||||||||||||    
T  42813826 ctctcttcccctcctaaacccttcatccaaacacaccctta 42813866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 15224938 - 15224743
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||  ||||||||||||||| ||||||||| || ||| | |||| |||| ||||||||| || || ||| ||||||||  | |||||     
T  15224938 agggtgtgtttggatcaagggtttaggagggg-aagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaa 15224840  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||||  |||||||||| |||||||||||||||||||  ||  | |  ||| ||||||  |||| ||| |||||||||| |||||| |||||||    
T  15224839 ttaagtgtgattgaagtattatatgatcatttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 15224743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 22356011 - 22356106
Alignment:
Q  55 ttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgtt 150  Q
    |||||||||||||| |||||||||| |||||||||||||||||| ||||||  |||||||||||||||||||| ||| |||||  ||||| |||||    
T  22356011 ttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcatcaatcattttgtt 22356106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 16713494 - 16713630
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtt 109  Q
    ||||||||| ||||||||||||| |||||| |||||| || || ||||| ||||| ||| |||||||||  |||| |||||| |||||| |||| || ||    
T  16713494 ggtgtgttttgattgagggtttaagagggg-aagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaagaaatt 16713592  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    | |||||||||||||||| |||  ||||||||||||||    
T  16713593 atgtgtttttgaagtattatatattcatttatcatgtt 16713630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 36347787 - 36347538
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||||||||||| |||||||||| || |  ||| | |||| |||| |||||||||  | || ||| ||||||||  ||||||    
T  36347787 ttagggtgtgtttggattgagggtttagga-ggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaata 36347689  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtt 205  Q
    | ||||||||  |||||||||| ||| ||  |||||||||||  ||  | || | | |||||| ||| | ||| | |||||||| |||||| |||||||     
T  36347688 aattaagtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtg 36347589  T
Q  206 aa-----tcttccct-----tcctaaacccttcatccaaacacacccttaa 246  Q
    ||     ||||||||     |||||||||||||||||||||||||||||||    
T  36347588 aactctctcttcccttcccctcctaaacccttcatccaaacacacccttaa 36347538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 1270522 - 1270394
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgtt-ttttcaaaataa 106  Q
    |||||| ||||||||||||| |||||||||   ||||||||| |  | ||| ||||||||| |||||||||| |||||||||||||| ||||  ||||||    
T  1270522 agggtgcgtttggattgaggatttaggaggac-aagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataa 1270424  T
Q  107 gttaagtgtttttgaagtattttatgatca 136  Q
     ||||||||||||||||| || ||||||||    
T  1270423 attaagtgtttttgaagtgttatatgatca 1270394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 9313082 - 9313182
Alignment:
Q  108 ttaagtgtttttgaagtattttat----gatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    |||||||||||||||||||  |||    |||||||||||| |||||||||| ||||||| |||||| ||||||||||||| ||||| |||||| ||||||    
T  9313082 ttaagtgtttttgaagtataatatgatcgatcatttatcaagttgttaattcaattttcgaaaaatcattttataatgtctgtaatttaaaaaggaaaag 9313181  T
Q  204 t 204  Q
    |    
T  9313182 t 9313182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 242
Target Start/End: Original strand, 39821750 - 39821902
Alignment:
Q  90 atgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaat 189  Q
    ||||||||  ||||||| |||||||   || ||||||| || ||||||||||||||||  ||  | || | | |||| ||||||| ||| ||||||||||    
T  39821750 atgtttttctaaaataaattaagtgcgatttaagtattataagatcatttatcatgttaatatgttaactctttaaatattatttcatagtgtccgtaat 39821849  T
Q  190 ctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccc 242  Q
     |||||||||||| | || | |||| ||||||||||| |||||||||||||||    
T  39821850 ttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaacacaccc 39821902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 17334059 - 17333937
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaa-ttacgagcaatgtaaaatgttttttcaaaa 103  Q
    |||||||||| |||| ||||||||||||||||||| |||| |||| |    ||| ||||||||| | || |||| | ||||||||||||| |||| ||||    
T  17334059 cttagggtgtttttgaattgagggtttaggagggg-aaggaaggggaggactcacttttatttttttaagttacaaacaatgtaaaatgtctttttaaaa 17333961  T
Q  104 taagttaagtgtttttgaagtatt 127  Q
    ||| ||||||||||||||||||||    
T  17333960 taaattaagtgtttttgaagtatt 17333937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 31795932 - 31795818
Alignment:
Q  90 atgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaat 189  Q
    ||||||||| ||||||| ||||||||  |||||||||| ||||||| ||||||||||||||| || | ||||  |||||   ||| ||| ||||||||||    
T  31795932 atgtttttttaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaat 31795833  T
Q  190 ctaaaaaagaaaagt 204  Q
     |||||| |||||||    
T  31795832 ttaaaaacgaaaagt 31795818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 41778773 - 41778906
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||| ||||  ||||||||| |  ||| | |||| |  | ||||||| |  || | ||||||||||||| |||||||     
T  41778773 agggtgtgtttggattgagggtttagaaggga-aagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaa 41778871  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatc 142  Q
    ||||||||  |||||||||| ||||||||||||||    
T  41778872 ttaagtgtgattgaagtattatatgatcatttatc 41778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22356255 - 22356179
Alignment:
Q  1 ttttcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacg 78  Q
    |||| |||||||||||||||||||||| ||||||| ||||||||||||| |  |||||||||| |||| |||||||||    
T  22356255 tttttttagggtgtgtttggattgaggatttagga-ggggaagggaggggagggttcatttttcttttttaaattacg 22356179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 16713650 - 16713718
Alignment:
Q  134 tcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaa 202  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||||| |||||| | | ||||||||||    
T  16713650 tcatttctcatgttattaattcaattttctaaaaattattttataatatccgtagttttaaaaagaaaa 16713718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 22356134 - 22356197
Alignment:
Q  140 atcatgttgttaattaaattttctaaaaattattttat-aatgtccgtaatctaaaaaagaaaa 202  Q
    ||||| ||||||||| |||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  22356134 atcattttgttaattcaattttctaaaaatcattttataaatgtccgtaatttaaaaaagaaaa 22356197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 23739948 - 23739882
Alignment:
Q  61 tttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtatt 127  Q
    |||||||| ||||||||||  || |||||||||||||| ||||||| |||| |||||||||||||||    
T  23739948 tttattttttaaattacgaaaaaagtaaaatgtttttttaaaataaattaaatgtttttgaagtatt 23739882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 17379842 - 17379886
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  17379842 tcttagggtgtgtttggattgagggtttagga-ggggaagggaggg 17379886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 35736173 - 35736215
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  35736173 ttagggtgtgtttggattgagggtttagga-ggggaagggaggg 35736215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 40022358 - 40022393
Alignment:
Q  3 ttcttagggtgtgtttggattgagggtttaggaggg 38  Q
    ||||||||||||||||||||||||||||||||||||    
T  40022358 ttcttagggtgtgtttggattgagggtttaggaggg 40022393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 8427110 - 8426977
Alignment:
Q  13 gtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaag 112  Q
    ||||||||||||||||||||||||||  ||||||||| |  ||| | ||||  ||| |||| |||   | || ||| ||||||||  ||||||| |||||    
T  8427110 gtgtttggattgagggtttaggaggga-aagggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaag 8427012  T
Q  113 tgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||   |||||||||| |||||||||||||||||||    
T  8427011 tgcgattgaagtattatatgatcatttatcatgtt 8426977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 1583239 - 1583311
Alignment:
Q  171 attttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    |||| ||| |||||||||| |||||| ||||||| || | |||| ||||||||||| |||||||||| |||||    
T  1583239 atttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcctaaaccctccatccaaacaaaccct 1583311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 886988 - 887051
Alignment:
Q  81 caatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcat 144  Q
    |||| ||||||| ||||| ||||||| ||| ||||  |||||||||| ||||||||||||||||    
T  886988 caatataaaatgcttttttaaaataaattatgtgtgattgaagtattatatgatcatttatcat 887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 17380085 - 17380054
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||||||||||||||||    
T  17380085 agggtgtgtttggattgagggtttaggagggg 17380054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 37740055 - 37739997
Alignment:
Q  90 atgttttttc-aaaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||||||||| ||||||| ||||||||  |||||||||| ||||||| |||||||||||    
T  37740055 atgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 37739997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 42813864 - 42813775
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgtttttt 98  Q
    |||||||||||||||  ||||||||||| ||||||| ||||| || | | |||||| |||| |||||||||| || | ||||||| |||||    
T  42813864 agggtgtgtttggatgaagggtttagga-ggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaatgattttt 42813775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 2241413 - 2241548
Alignment:
Q  10 ggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtt 109  Q
    ||||||||| ||||||||||| |||||||| ||||||||| |  ||| | |||| | || |||||||||  | || ||| | ||||||  ||||||| ||    
T  2241413 ggtgtgtttagattgagggtt-aggagggg-aagggaggggagagtttacttttttattataaattacggactatataatacgtttttctaaaataaatt 2241510  T
Q  110 aagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||||||  |||||||||| ||||||  |||||||||||    
T  2241511 aagtgtaattgaagtattatatgattgtttatcatgtt 2241548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 2380988 - 2381033
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||| ||||||||||| |||||||||||||||| | |||||||    
T  2380988 tcttaggatgtgtttggatagagggtttaggaggggaaggggaggg 2381033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 9427233 - 9427200
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggaggg 38  Q
    |||||||||||||||||||||||||| |||||||    
T  9427233 cttagggtgtgtttggattgagggttcaggaggg 9427200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 23748103 - 23748136
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||| ||||||||||||||||    
T  23748103 ttagggtgtgtttggatcgagggtttaggagggg 23748136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 23748339 - 23748299
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  23748339 agggtgtgtttggatggagggtttagga-ggggaagggaggg 23748299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Original strand, 23748305 - 23748342
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacacccttaa 246  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  23748305 cttcccctcctaaaccctccatccaaacacacccttaa 23748342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 12541773 - 12541801
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||||||||||||    
T  12541773 gtgtgtttggattgagggtttaggagggg 12541801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 15224904 - 15224940
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacaccctta 245  Q
    |||||| |||||||||||| |||||||||||||||||    
T  15224904 cttcccctcctaaacccttgatccaaacacaccctta 15224940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 39
Target Start/End: Complemental strand, 36567093 - 36567065
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||||||||||||    
T  36567093 gtgtgtttggattgagggtttaggagggg 36567065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 8e-52; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 15323223 - 15323405
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||  |  | ||| ||||||||| |||||||||| ||||||||||| | |||| ||||||    
T  15323223 ttagggtgtgtttggattgagggtttaggagggg-aagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatatatttttaaaata 15323321  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaat 189  Q
    | |||||||||| ||| ||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||    
T  15323322 aattaagtgtttctgatgtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtccgtaat 15323405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 6 - 189
Target Start/End: Original strand, 15353362 - 15353543
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||  |  | ||| ||||||||| |||||||||| ||||||||||||||||||  |||||    
T  15353362 ttagggtgtgtttggattgagggtttaggagggg-aagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaata 15353460  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaat 189  Q
    | | |||||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||    
T  15353461 aat-aagtgtttttgatgtattatatgatcatttataatgttgttaattcaattttctaaaaatcattttataatgtccgtaat 15353543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 9051776 - 9051583
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||||||||| |||||| ||||||||| || | ||| ||||||||| |||||||||| ||||||||||| ||||||  ||||||     
T  9051776 agggtgtgtttggattgagggtttaagagggg-aagggaggggat-gctcacttttatttt-taaattacgaacaatgtaaaatattttttttaaataaa 9051680  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||||| |||||   |||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| ||||||| ||||||    
T  9051679 ttaagtgtttttaaagtagcatatgatcatttatcatgttgttaattcaattttctaaaaatcattttataatatccgtaatttaaaaaaaaaaagt 9051583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 26318350 - 26318510
Alignment:
Q  54 gttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaat 153  Q
    ||||||||||||||| ||||||||||  ||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  26318350 gttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgttgttaat 26318449  T
Q  154 taaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttccc 214  Q
    | |||||||||||| | |||||||||  ||| |||| |||||||||||||| |||||||||    
T  26318450 tcaattttctaaaagtcattttataaaatccataatttaaaaaagaaaagtaaatcttccc 26318510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 31798914 - 31799116
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaa-- 101  Q
    ||||||||||||||||||||||||||||||||||   ||| ||||  ||   ||  ||||||||| |||||||||||||||||||||||||||||         
T  31798914 tcttagggtgtgtttggattgagggtttaggaggat-aagagaggagatgactcgcttttattttttaaattacgagcaatgtaaaatgttttttttttt 31799012  T
Q  102 -aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaa 200  Q
     |||||   || ||||||||||||||| |||||||||||||||||||||||||| ||||||  ||||||||||||||||| |||||||| ||||||||||    
T  31799013 taataaaaaaaatgtttttgaagtattatatgatcatttatcatgttgttaattcaatttttaaaaaattattttataatatccgtaatttaaaaaagaa 31799112  T
Q  201 aagt 204  Q
    ||||    
T  31799113 aagt 31799116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 25468562 - 25468448
Alignment:
Q  90 atgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaat 189  Q
    ||||||||| ||||||| |||||||||||||||||||| ||| ||||||||||| |||||||| | |||||||| |||||||||||||||||||| ||||    
T  25468562 atgtttttttaaaataaattaagtgtttttgaagtattatataatcatttatcacgttgttaaattaattttcttaaaattattttataatgtccataat 25468463  T
Q  190 ctaaaaaagaaaagt 204  Q
     ||||||||||||||    
T  25468462 ttaaaaaagaaaagt 25468448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 4097480 - 4097284
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttc------aa 101  Q
    |||||||||| |||| ||||||||||||||||      |||| ||   ||| ||||||||| ||||||  || ||||||||||||||||||       ||    
T  4097480 agggtgtgttaggatggagggtttaggagggg------aggggatgactcacttttattttttaaattgtgaacaatgtaaaatgttttttttttttaaa 4097387  T
Q  102 aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaa 201  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||  |||||| |||    
T  4097386 aataaattaagtgttttggaagtattgtatgatcatttatcatgttgttaattcaattttctaaaaaatattttataatgtccgtgattcaaaaaataaa 4097287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 81 - 245
Target Start/End: Original strand, 3841156 - 3841332
Alignment:
Q  81 caatgtaaaatgttttttc-aaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttct--aaaaattattttat 177  Q
    ||||||||||||||||||  ||||||| |||||||||||||||||||| ||| |||||||||||| ||||||||| |||||| |  |||||| |||||||    
T  3841156 caatgtaaaatgttttttttaaaataaattaagtgtttttgaagtattatatcatcatttatcat-ttgttaattcaattttgtaaaaaaatcattttat 3841254  T
Q  178 aatgtccgtaatctaaaaaagaaaagt----------taatcttcccttcctaaacccttcatccaaacacaccctta 245  Q
    |||||||||||| ||||||||||||||          |  ||||||| ||||||||||||||||||||||||||||||    
T  3841255 aatgtccgtaatttaaaaaagaaaagtaagtcttccattttcttcccctcctaaacccttcatccaaacacaccctta 3841332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 10293248 - 10293443
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    ||||||||||||||||||| ||||||||||  |  || | |||| |  | ||| ||||||||| |||||||||| ||||||||||| |||||  ||||||    
T  10293248 ttagggtgtgtttggattgtgggtttaggaaagaaaaag-aggggagggctcacttttattttttaaattacgaacaatgtaaaatattttt--aaaata 10293344  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    | |||    ||||||||||||| |||||| |||||| ||||||| |||| | |||||||||||| |||||||||| || ||||| | ||||||||||||    
T  10293345 aattaccgatttttgaagtattatatgattatttatgatgttgtcaattcagttttctaaaaatcattttataatatctgtaatttgaaaaagaaaagt 10293443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 23090995 - 23091118
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||| ||||||||||||| ||||||||| |  | ||| |||||| || |||||||||| |||| |||||||| |||| ||| |||     
T  23090995 agggtgtgtttggattgaaggtttaggagggg-aagggaggggagggctcacttttatcttttaaattacgaacaatctaaaatgtatttttaaactaaa 23091093  T
Q  108 ttaagtgtttttgaagtattttatg 132  Q
    |||||||||||||||||||| ||||    
T  23091094 ttaagtgtttttgaagtattatatg 23091118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 4097759 - 4097618
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttc-aaaat 104  Q
    |||| |||||||||||||||||||||| |||||| ||||||||| |  ||||| |||| |||| |||||||||  |||| ||| || ||||||| |||||    
T  4097759 ttagagtgtgtttggattgagggtttaagagggg-aagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaat 4097661  T
Q  105 aagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    || ||||||||  |||||||||| ||||||| |||||||||||    
T  4097660 aaattaagtgtgattgaagtattatatgatcgtttatcatgtt 4097618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 15373739 - 15373668
Alignment:
Q  113 tgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtcc 184  Q
    ||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||    
T  15373739 tgtttttgatgtattatatgatcatttgtcatgttgttaattcaattttctaaaaatcattttataatgtcc 15373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 30850153 - 30849919
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtta 110  Q
    ||||||||||||||||||||||||||||  ||| || || |  ||| | |||| | || ||||||| ||   || ||| ||||||||| |||| || ||     
T  30850153 gtgtgtttggattgagggtttaggaggga-aagagaagggagagtttacttttttattttaaattatgaattatataatatgtttttttaaaacaaattt 30850055  T
Q  111 agtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatct 210  Q
    ||| |  |||||||||| ||||||| ||||||||||| ||| || ||||||  ||||| ||||||||| | | |||||| |||||| |||| || ||||     
T  30850054 agtataattgaagtattatatgatcgtttatcatgttattattttaatttt--aaaaaatattttatagtatgcgtaatttaaaaacgaaatgtaaatcc 30849957  T
Q  211 tcccttcctaaacccttcatccaaacacacccttaaag 248  Q
    |||| ||| |||||||||||||| ||| ||||||||||    
T  30849956 tcccctcccaaacccttcatccatacatacccttaaag 30849919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 34176711 - 34176610
Alignment:
Q  113 tgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttc 212  Q
    |||||||||| |||| ||||||||||||| || ||||||||| |||||| ||||||| | |||||||| | |||||| |||||||||||||| | |||||    
T  34176711 tgtttttgaaatattatatgatcatttattatattgttaattcaattttttaaaaatcaatttataattttcgtaatttaaaaaagaaaagtaagtcttc 34176612  T
Q  213 cc 214  Q
    ||    
T  34176611 cc 34176610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 10818229 - 10818316
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgtttt 96  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |||| |||||||||  |||| ||| |||||||    
T  10818229 agggtgtgtttggattgagggtttagga-ggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatgtttt 10818316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 29692977 - 29693079
Alignment:
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatg--------ttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaaga 199  Q
    ||||||||||||||||||||  ||||||||||||||||        ||||||||| | |||||||| ||||||||||||||||| ||||| |||||||||    
T  29692977 ttaagtgtttttgaagtattacatgatcatttatcatgattttcttttgttaatttatttttctaagaattattttataatgtctgtaatttaaaaaaga 29693076  T
Q  200 aaa 202  Q
    |||    
T  29693077 aaa 29693079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 28477079 - 28477182
Alignment:
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatg---------ttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaag 198  Q
    ||||||||||||||||||||  ||||||||||||||||         ||||||||| | |||||||| ||||||||||||||||| ||||| ||||||||    
T  28477079 ttaagtgtttttgaagtattacatgatcatttatcatgatttttcttttgttaatttatttttctaagaattattttataatgtctgtaatttaaaaaag 28477178  T
Q  199 aaaa 202  Q
    ||||    
T  28477179 aaaa 28477182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 245
Target Start/End: Complemental strand, 21607090 - 21606852
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaata 105  Q
    |||| ||||||||||||||||||||||||||||| ||| |||   | |||| |  |||  ||| |||||||| | | || | | ||||||||  ||||||    
T  21607090 ttagagtgtgtttggattgagggtttaggagggg-aagagagatgaatgtttacatttcgtttttaaattacaaactatattatatgtttttctaaaata 21606992  T
Q  106 agttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagtt 205  Q
    | | ||||||   ||||||||| || |||| |||||||||||  ||  | || ||| || |||  |||| ||| | |||||||| |||||| |||||||     
T  21606991 aataaagtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaagta 21606892  T
Q  206 aatcttcccttcctaaacccttcatccaaacacaccctta 245  Q
    || | |||| ||||||||||| ||||||||||||||||||    
T  21606891 aaccctcccctcctaaaccctccatccaaacacaccctta 21606852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 383026 - 382980
Alignment:
Q  81 caatgtaaaatgttttttcaaaataagttaagtgtttttgaagtatt 127  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  383026 caatgtaaaatgtttttttaaaataaattaagtgtttttgaagtatt 382980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 31849106 - 31849346
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaa 103  Q
    |||||| ||||||| |||||||||||||| |||||| ||||||||| |  ||| | |||| |||| |||| |||   | || ||| || |||||  ||||    
T  31849106 tcttagagtgtgttaggattgagggtttaagagggg-aagggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaa 31849204  T
Q  104 taagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    ||| | ||||||  |||||||||| ||| ||  ||||||| |||  ||  | |||||| |||||   |||||||| |||||||||| |||||| ||||||    
T  31849205 taaatcaagtgtgattgaagtattatattattgtttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaag 31849304  T
Q  204 ttaatcttcccttcctaaacccttcatccaaacacaccctta 245  Q
    | || | |||| |||| ||| || |||| |||||||||||||    
T  31849305 tgaaccctcccctcctgaactctccatctaaacacaccctta 31849346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 14515473 - 14515609
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||||||||||||||||||||||||| ||||||||||||| |  |||  ||||| |||| ||||||||  | | |  | ||||||| |  |||||||     
T  14515473 agggtgtgtttggattgagggtttagga-ggggaagggaggggagggtttgtttttcttttttaaattac--ggactagataatgtttctctaaaataaa 14515569  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||||||||   ||||||||| ||| |||||||||||||||    
T  14515570 ttaagtgtgaatgaagtattatattatcatttatcatgtt 14515609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 1300625 - 1300660
Alignment:
Q  4 tcttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||||||||||||||||||||    
T  1300625 tcttagggtgtgtttggattgagggtttaggagggg 1300660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 16738239 - 16738035
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||| |||||||||||||||||||||| ||| |  |||||| |  ||| | |||| |||| ||||||||     || ||||||||||||  |||||||     
T  16738239 agggtttgtttggattgagggtttaggatgggaa--ggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaa 16738142  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaa 207  Q
     |||||||| || ||||||| ||||||| | ||||||||| ||| || |||||   |||||  |||| ||| | ||| |||| |||||| ||||||| ||    
T  16738141 gtaagtgttatttaagtattatatgatcgtatatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaagtaaa 16738042  T
Q  208 tcttccc 214  Q
    |||||||    
T  16738041 tcttccc 16738035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14515722 - 14515684
Alignment:
Q  1 ttttcttagggtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  14515722 ttttcttagggtgtgtttggatggagggtttaggagggg 14515684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 34177093 - 34177040
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgtttt-ttcaaaataagttaag 112  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||||| |||||    
T  34177093 ttttattttttaaattacgaacaatgtaaaatgttttcttcaaaataaattaag 34177040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 19278278 - 19278144
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtta 110  Q
    |||||||||||||||| |||||||| ||||||||||||| |  ||| | |||| |||| |||||||||  | || ||| ||||||||  ||||||| ||     
T  19278278 gtgtgtttggattgagagtttagga-ggggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaattt 19278181  T
Q  111 agtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    ||| |  |||||||||  ||||||| |||||||||||    
T  19278180 agtctgattgaagtatcatatgatcgtttatcatgtt 19278144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 30487546 - 30487411
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagtta 110  Q
    |||||||| |||||||||||||||| ||||||||||| | |  ||| | ||||||||| |||| ||||  | || ||| ||||||||  ||||||| | |    
T  30487546 gtgtgtttcgattgagggtttagga-ggggaagggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatca 30487448  T
Q  111 agtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||||  |||||||||| ||| ||  |||||||||||    
T  30487447 agtgtgattgaagtattatattattgtttatcatgtt 30487411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 39
Target Start/End: Original strand, 4097235 - 4097266
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||||||||||||||||||    
T  4097235 agggtgtgtttggattgagggtttaggagggg 4097266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 9719034 - 9719071
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  9719034 gtgtgtttggattgagggtttagga-ggggaagggaggg 9719071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 9721138 - 9721207
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacg 78  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |  ||| ||||||  ||| |||||||||    
T  9721138 agggtgtgtttggattgaaggtttagga-ggggaagggaggggagggtttatttttcatttttaaattacg 9721207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 10818325 - 10818411
Alignment:
Q  118 ttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    |||||||||| |||||||||||||||||||  ||  | ||| || ||||||  |||| ||| |||||||||| |||||| |||||||    
T  10818325 ttgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 10818411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 12811227 - 12811197
Alignment:
Q  5 cttagggtgtgtttggattgagggtttagga 35  Q
    |||||||||||||||||||||||||||||||    
T  12811227 cttagggtgtgtttggattgagggtttagga 12811197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 32926737 - 32926783
Alignment:
Q  101 aaataagttaagtgtttttgaagtattttatgatcatttatcatgtt 147  Q
    |||||| ||||||||  |||||||||| |||||||||||||||||||    
T  32926737 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 32926783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 15373770 - 15373733
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttt 97  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  15373770 ttttattttttaaattacgaacaatgtaaaatgttttt 15373733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 30487340 - 30487303
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacacccttaa 246  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  30487340 cttcccctcctaaaccctccatccaaacacacccttaa 30487303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 30487306 - 30487346
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggaggg 49  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  30487306 agggtgtgtttggatggagggtttagga-ggggaagggaggg 30487346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 37383 - 37577
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    |||||| ||||| ||||||| ||||||||||  |||| |||| |  | ||| ||||||||| |||||||||| |||||||||||||||||| |||||||     
T  37383 agggtgcgtttgaattgaggatttaggagggc-aaggaaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaa 37481  T
Q  108 ttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaag 203  Q
    | ||||||||||||||| || |||||||| ||||||||||||||||||| |||||||||||| || ||||| |||| ||||| |||||||||||||    
T  37482 tcaagtgtttttgaagtgttatatgatcacttatcatgttgttaattaagttttctaaaaatcatcttatattgtctgtaatttaaaaaagaaaag 37577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 30715 - 30843
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatg-ttttttcaaaataa 106  Q
    |||||| ||||||||||||| |||||||||   ||||||||| |  | ||| ||||||||| |||||||||| |||||||||||| ||||||  ||||||    
T  30715 agggtgcgtttggattgaggatttaggaggac-aagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataa 30813  T
Q  107 gttaagtgtttttgaagtattttatgatca 136  Q
     ||||||||||||||||| || ||||||||    
T  30814 attaagtgtttttgaagtgttatatgatca 30843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 1642 - 1446
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttt-tcaaaataa 106  Q
    |||||||||||| |||||||||||||||| || || |||||| |  | ||| ||||||||| |||||||||| ||||||||||||||||| |  ||||||    
T  1642 agggtgtgtttgaattgagggtttaggagagg-aatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttctttaaataa 1544  T
Q  107 gttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
     |||||| ||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||||| | | ||||||||||||||    
T  1543 attaagtattttttaagtattatatgatcatttatcaagttgttaattcaattttctaaaaatcattctataatgtccgcagtttaaaaaagaaaagt 1446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 1175 - 1203
Alignment:
Q  11 gtgtgtttggattgagggtttaggagggg 39  Q
    |||||||||||||||||||||||||||||    
T  1175 gtgtgtttggattgagggtttaggagggg 1203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 60 - 246
Target Start/End: Original strand, 52937 - 53120
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| |||||||| | ||||||||||| |||||| ||| ||  ||||||||||||||| |||| ||||||||||||||||||||||| || ||||    
T  52937 ttttattttttaaattacaaacaatgtaaaatatttttttaaa-tacattaagtgtttttgaaatattatatgatcatttatcatgttgttagttcaatt 53035  T
Q  160 ttctaaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacacccttaa 246  Q
    ||| |||||| |||| |||||| || |||| ||||||||||||||  ||  |||  ||||||||||| |||||||||||||||||||    
T  53036 ttcaaaaaatcatttcataatgcccataatttaaaaaagaaaagtacattgtcc--tcctaaaccctccatccaaacacacccttaa 53120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 52975 - 52896
Alignment:
Q  164 aaaaattattttataatgtccgtaatctaaaaaagaaaagttaatcttcccttcctaaacccttcatccaaacacaccct 243  Q
    ||||| ||||||| | |||  ||||| ||||||| |||||| | ||||||| |||||||||||  |||||||||||||||    
T  52975 aaaaaatattttacattgtttgtaatttaaaaaataaaagtgagtcttcccatcctaaaccctcaatccaaacacaccct 52896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 52894 - 52923
Alignment:
Q  6 ttagggtgtgtttggattgagggtttagga 35  Q
    ||||||||||||||||||||||||||||||    
T  52894 ttagggtgtgtttggattgagggtttagga 52923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 60 - 179
Target Start/End: Original strand, 8198 - 8317
Alignment:
Q  60 ttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt 159  Q
    ||||||||| |||||||||| |||||| |||||| |||| || |||| |||| ||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  8198 ttttattttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatcatgttgttaattcaatt 8297  T
Q  160 ttctaaaaattattttataa 179  Q
    || ||||||| |||||||||    
T  8298 ttttaaaaataattttataa 8317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 72 - 204
Target Start/End: Original strand, 242275 - 242411
Alignment:
Q  72 aattacgagcaatgtaaaatgttttttc----aaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaa 167  Q
    |||||||| |||| |||||||||||||     ||||||| | |||| |||||||| |||| ||| |||||||||||||| ||||||| |||||| |||||    
T  242275 aattacgaacaatataaaatgttttttttattaaaataaatgaagtatttttgaattattatatcatcatttatcatgtcgttaattcaattttttaaaa 242374  T
Q  168 attattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    || ||||||||||||||||||| ||||||||||||||    
T  242375 atcattttataatgtccgtaatttaaaaaagaaaagt 242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 184608 - 184816
Alignment:
Q  5 cttagggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttca---- 100  Q
    |||||||||||||||||||||||||||||||||||      ||||     |||| ||||||||| ||||||| || | || |||||||||||||          
T  184608 cttagggtgtgtttggattgagggtttaggagggg------aggg-----ttcacttttattttttaaattatgaactatataaaatgtttttttttttt 184696  T
Q  101 -aaataagttaagtgtttt-tgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaag 198  Q
     |||||| ||||||||||| ||||||||| |||||| || |||||||||||||||| ||||||  |||||| |||||||||||||| |||| ||||||||    
T  184697 taaataaattaagtgttttttgaagtattatatgataatatatcatgttgttaattcaattttaaaaaaatcattttataatgtccataatttaaaaaag 184796  T
Q  199 aaaagttaatcttcccttcc 218  Q
    || ||| || | ||||||||    
T  184797 aatagtaaaccctcccttcc 184816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1414 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 180
Target Start/End: Original strand, 355 - 473
Alignment:
Q  64 attttgtaaattacgagcaatgtaaaatgttttttcaa--aataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaa-ttaaattt 160  Q
    ||||| || ||||||| ||| ||||||||||||||  |  ||||| |||||||||||||||||||||||| ||||||||||||| |||||| || |||||    
T  355 attttttatattacgaacaacgtaaaatgttttttttataaataa-ttaagtgtttttgaagtattttattatcatttatcatgctgttaattttaattt 453  T
Q  161 tctaaaaattattttataat 180  Q
    ||||||||| ||||||||||    
T  454 tctaaaaatcattttataat 473  T

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Target: scaffold0240 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 17640 - 17735
Alignment:
Q  109 taagtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||| ||||||||||| |||||| ||||||||||||| ||||| ||||||| |||||| |||||||||| |  ||||| ||||||||||||||    
T  17640 taagtgtatttgaagtattatatgattatttatcatgttgctaattcaattttcaaaaaatcattttataatatttgtaatttaaaaaagaaaagt 17735  T

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Target: scaffold0067 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 204
Target Start/End: Complemental strand, 39434 - 39236
Alignment:
Q  8 agggtgtgtttggattgagggtttaggagggggaagggagggcattgttcatttttattttgtaaattacgagcaatgtaaaatgttttttcaaaataag 107  Q
    ||||||||||||||||||||||||| || ||| ||||||||| |  ||| | |||| |||| |||||||||  | |||||| ||||||||  |||||||     
T  39434 agggtgtgtttggattgagggttta-gaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaa 39336  T
Q  108 ttaagtgttttt---gaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgtccgtaatctaaaaaagaaaagt 204  Q
    ||||||||  ||   |||||||| |||||||||||||||||||  ||  | || ||| ||||||  |||| ||| |||||||||| |||||| |||||||    
T  39335 ttaagtgtgattgaagaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagt 39236  T

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Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 39184 - 39217
Alignment:
Q  6 ttagggtgtgtttggattgagggtttaggagggg 39  Q
    ||||||||||||||||| ||||||||||||||||    
T  39184 ttagggtgtgtttggatggagggtttaggagggg 39217  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 187
Target Start/End: Complemental strand, 69374 - 69272
Alignment:
Q  86 taaaatgttttttcaaaataagttaagtgtttttgaagtattttatgatcatttatcatgttgttaattaaatt-ttctaaaaattattttataatgtcc 184  Q
    ||||||||||||| ||||||| ||||| ||    |||||||| |||||||||||||||| |||||| || |||| || | ||||  |||||||||||| |    
T  69374 taaaatgtttttttaaaataaattaagggtgacagaagtattatatgatcatttatcatcttgttatttcaattctttttaaaaagattttataatgttc 69275  T
Q  185 gta 187  Q
    |||    
T  69274 gta 69272  T

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Target: scaffold0294 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 15472 - 15504
Alignment:
Q  209 cttcccttcctaaacccttcatccaaacacacc 241  Q
    |||||||||||||||||| ||||||||||||||    
T  15472 cttcccttcctaaaccctccatccaaacacacc 15504  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 81546 - 81498
Alignment:
Q  118 ttgaagtattttatgatcatttatcatgttgttaattaaattttctaaa 166  Q
    |||||||||| ||||||||||||||||||| ||| || |||||| ||||    
T  81546 ttgaagtattatatgatcatttatcatgttattatttcaattttttaaa 81498  T

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