View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2559_low_1 (Length: 325)
Name: NF2559_low_1
Description: NF2559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2559_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 18 - 320
Target Start/End: Original strand, 39935728 - 39936030
Alignment:
| Q |
18 |
taggtagcatattatgggagtttaaccctgatcgtagttcttcataaaaaattccagagttctttttcacttcaaagataatatcgcctttcacgcacaa |
117 |
Q |
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| T |
39935728 |
taggtagcatattatgggagtttaaccctgatcgtagttcttcataaaaaattccagagttctttttcacttcaaagataacatcgcctttcacgcacaa |
39935827 |
T |
|
| Q |
118 |
tatctaatatacttgtttgttttcttaatcctcatttctcctatttatacgtgataacccctctacttaatcagctacactaactataactaatccttac |
217 |
Q |
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||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39935828 |
tatctaatatacttggttgttttcttaatccttatttctcctatttatacgtgataacccctctacttaatcagctacactaactataactaatccttac |
39935927 |
T |
|
| Q |
218 |
taatctaactcccatttattctttattcttttactgtctcttgtttcaacatttttgtgagatagatcaatttttcaataacattttttacacctttgct |
317 |
Q |
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||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |
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| T |
39935928 |
taatctaacacccatttattctttattcttgtactgtctcttgtttcaacatttttgtgagatagatcaatttttcaataacattttttacatctttgat |
39936027 |
T |
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| Q |
318 |
tct |
320 |
Q |
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||| |
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| T |
39936028 |
tct |
39936030 |
T |
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