View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2560_low_17 (Length: 214)

Name: NF2560_low_17
Description: NF2560
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2560_low_17
NF2560_low_17
[»] chr5 (50 HSPs)
chr5 (9-92)||(35512146-35512231)
chr5 (9-92)||(5993887-5993972)
chr5 (9-87)||(39453303-39453383)
chr5 (11-87)||(11761752-11761830)
chr5 (11-87)||(27587151-27587229)
chr5 (9-90)||(13362573-13362656)
chr5 (11-87)||(3529189-3529267)
chr5 (13-93)||(20814484-20814566)
chr5 (28-87)||(17202763-17202824)
chr5 (28-87)||(18670205-18670266)
chr5 (9-92)||(20840531-20840616)
chr5 (9-87)||(16157200-16157280)
chr5 (9-87)||(24547470-24547550)
chr5 (28-92)||(14194421-14194487)
chr5 (12-87)||(5024366-5024443)
chr5 (9-92)||(13962862-13962947)
chr5 (28-87)||(18247089-18247150)
chr5 (13-92)||(32242240-32242321)
chr5 (9-92)||(38475344-38475429)
chr5 (9-87)||(16082980-16083060)
chr5 (9-87)||(17202402-17202482)
chr5 (9-87)||(19892653-19892733)
chr5 (1-87)||(28771175-28771263)
chr5 (9-87)||(35920529-35920609)
chr5 (28-93)||(28770866-28770933)
chr5 (30-87)||(35512480-35512539)
chr5 (35-87)||(186790-186844)
chr5 (15-87)||(21265493-21265567)
chr5 (14-97)||(6150447-6150532)
chr5 (28-87)||(11762081-11762142)
chr5 (28-87)||(39453663-39453724)
chr5 (28-87)||(42265738-42265799)
chr5 (28-91)||(43159178-43159243)
chr5 (58-95)||(13362245-13362282)
chr5 (41-90)||(11047813-11047864)
chr5 (28-93)||(20840801-20840868)
chr5 (28-97)||(27587479-27587550)
chr5 (35-87)||(3528876-3528930)
chr5 (35-87)||(19892311-19892365)
chr5 (28-92)||(24547175-24547241)
chr5 (28-92)||(28269420-28269486)
chr5 (46-89)||(11740688-11740733)
chr5 (28-87)||(11741881-11741942)
chr5 (28-87)||(18247440-18247501)
chr5 (28-90)||(5835790-5835854)
chr5 (46-92)||(6150802-6150850)
chr5 (39-85)||(8322779-8322827)
chr5 (10-87)||(27937347-27937424)
chr5 (46-87)||(5024022-5024065)
chr5 (46-87)||(38442449-38442492)
[»] chr1 (60 HSPs)
chr1 (9-87)||(6367565-6367645)
chr1 (9-92)||(23209672-23209757)
chr1 (1-87)||(13914404-13914492)
chr1 (9-87)||(34464452-34464532)
chr1 (13-87)||(40772510-40772586)
chr1 (9-94)||(36694593-36694680)
chr1 (9-94)||(36710694-36710781)
chr1 (28-97)||(43759186-43759257)
chr1 (28-88)||(17692549-17692611)
chr1 (11-87)||(25647887-25647965)
chr1 (9-97)||(34464794-34464884)
chr1 (28-92)||(37578190-37578256)
chr1 (9-92)||(19017974-19018059)
chr1 (9-92)||(35152341-35152426)
chr1 (9-92)||(41098731-41098816)
chr1 (9-91)||(24009886-24009970)
chr1 (9-87)||(26024426-26024506)
chr1 (18-92)||(35473629-35473705)
chr1 (11-93)||(47999439-47999523)
chr1 (9-90)||(46163030-46163113)
chr1 (9-86)||(1103463-1103544)
chr1 (11-92)||(183538-183622)
chr1 (28-87)||(6367926-6367987)
chr1 (28-87)||(26024756-26024817)
chr1 (28-87)||(40772823-40772884)
chr1 (9-87)||(17662195-17662275)
chr1 (9-87)||(34850410-34850490)
chr1 (9-87)||(37578537-37578617)
chr1 (9-87)||(42248476-42248556)
chr1 (46-95)||(42533019-42533070)
chr1 (9-93)||(19515816-19515902)
chr1 (28-92)||(30711691-30711757)
chr1 (28-87)||(1103825-1103886)
chr1 (28-87)||(47999126-47999187)
chr1 (9-87)||(7820957-7821037)
chr1 (9-87)||(34849014-34849094)
chr1 (9-87)||(40210715-40210795)
chr1 (41-91)||(40435344-40435396)
chr1 (28-93)||(1841822-1841889)
chr1 (28-93)||(36694279-36694346)
chr1 (28-93)||(36710380-36710447)
chr1 (9-81)||(14878980-14879054)
chr1 (9-81)||(17188963-17189037)
chr1 (9-81)||(17189194-17189268)
chr1 (28-84)||(17691225-17691283)
chr1 (35-87)||(24009578-24009632)
chr1 (9-81)||(49955356-49955430)
chr1 (28-87)||(183224-183285)
chr1 (40-87)||(17661855-17661904)
chr1 (46-87)||(23209365-23209407)
chr1 (28-75)||(32917275-32917324)
chr1 (28-87)||(35152694-35152755)
chr1 (48-91)||(40210369-40210414)
chr1 (28-87)||(46899064-46899125)
chr1 (28-83)||(49723090-49723147)
chr1 (9-87)||(4960543-4960623)
chr1 (58-95)||(30322761-30322798)
chr1 (9-87)||(30711330-30711410)
chr1 (28-86)||(41099097-41099157)
chr1 (28-93)||(5734007-5734073)
[»] chr6 (23 HSPs)
chr6 (9-94)||(33517530-33517617)
chr6 (9-92)||(30337447-30337532)
chr6 (9-96)||(30803855-30803944)
chr6 (9-87)||(21628058-21628138)
chr6 (9-87)||(30725763-30725842)
chr6 (9-94)||(3059253-3059340)
chr6 (28-93)||(30726123-30726190)
chr6 (28-96)||(3059620-3059690)
chr6 (11-87)||(12080639-12080717)
chr6 (28-92)||(33647315-33647381)
chr6 (28-87)||(33517898-33517959)
chr6 (28-92)||(12081000-12081066)
chr6 (28-92)||(30804225-30804291)
chr6 (28-87)||(11434805-11434866)
chr6 (9-92)||(26463177-26463262)
chr6 (28-87)||(30337782-30337843)
chr6 (28-94)||(13379846-13379914)
chr6 (28-93)||(681092-681159)
chr6 (46-91)||(22617882-22617929)
chr6 (31-87)||(15115342-15115400)
chr6 (28-87)||(679869-679930)
chr6 (9-92)||(8090272-8090357)
chr6 (9-87)||(17734508-17734588)
[»] chr7 (44 HSPs)
chr7 (9-93)||(28469353-28469439)
chr7 (9-87)||(10935797-10935877)
chr7 (9-87)||(32299050-32299130)
chr7 (11-87)||(6253474-6253552)
chr7 (11-87)||(17102023-17102101)
chr7 (1-87)||(24388822-24388910)
chr7 (13-91)||(37656851-37656931)
chr7 (28-92)||(27396959-27397025)
chr7 (11-87)||(42731422-42731500)
chr7 (9-87)||(6571016-6571096)
chr7 (10-92)||(20426676-20426760)
chr7 (11-87)||(27991742-27991820)
chr7 (9-92)||(45010949-45011034)
chr7 (9-87)||(19204492-19204572)
chr7 (9-87)||(22871622-22871702)
chr7 (9-87)||(23181339-23181419)
chr7 (1-91)||(40379768-40379860)
chr7 (28-89)||(27992072-27992135)
chr7 (13-90)||(42019946-42020025)
chr7 (8-92)||(5457251-5457337)
chr7 (28-92)||(48788801-48788867)
chr7 (28-87)||(24389149-24389210)
chr7 (28-87)||(42019600-42019661)
chr7 (9-87)||(42362453-42362533)
chr7 (35-92)||(28105499-28105558)
chr7 (38-87)||(32053146-32053197)
chr7 (35-96)||(37657208-37657271)
chr7 (30-87)||(40380050-40380109)
chr7 (28-92)||(17102353-17102419)
chr7 (9-93)||(42618254-42618340)
chr7 (23-87)||(47946833-47946899)
chr7 (23-87)||(47952263-47952329)
chr7 (28-87)||(2640181-2640242)
chr7 (28-87)||(6253804-6253865)
chr7 (28-87)||(10936158-10936219)
chr7 (9-59)||(16803990-16804040)
chr7 (40-87)||(28469013-28469062)
chr7 (28-87)||(32298780-32298841)
chr7 (9-91)||(32934347-32934431)
chr7 (9-82)||(2640523-2640598)
chr7 (10-87)||(18670209-18670288)
chr7 (28-97)||(27396622-27396693)
chr7 (46-87)||(29141558-29141601)
chr7 (46-95)||(42731801-42731852)
[»] chr3 (29 HSPs)
chr3 (9-97)||(2796172-2796262)
chr3 (9-87)||(9294303-9294383)
chr3 (1-87)||(19741229-19741317)
chr3 (9-92)||(23458324-23458409)
chr3 (9-94)||(42342787-42342874)
chr3 (9-97)||(40033801-40033891)
chr3 (9-92)||(33689724-33689809)
chr3 (12-91)||(46474814-46474895)
chr3 (11-87)||(40758150-40758227)
chr3 (11-87)||(51994233-51994311)
chr3 (31-87)||(34142585-34142643)
chr3 (28-94)||(51993960-51994028)
chr3 (28-81)||(23457988-23458043)
chr3 (46-91)||(26463631-26463678)
chr3 (9-88)||(40506132-40506214)
chr3 (35-87)||(3850498-3850552)
chr3 (32-84)||(9368669-9368723)
chr3 (28-92)||(19740921-19740987)
chr3 (9-85)||(43384288-43384366)
chr3 (28-87)||(35712047-35712108)
chr3 (40-87)||(36150530-36150579)
chr3 (28-87)||(36418052-36418113)
chr3 (28-87)||(53757087-53757148)
chr3 (41-87)||(9292246-9292294)
chr3 (41-87)||(33689385-33689433)
chr3 (28-90)||(36417688-36417752)
chr3 (11-84)||(23276330-23276405)
chr3 (11-76)||(35643865-35643932)
chr3 (46-87)||(43384665-43384708)
[»] chr8 (36 HSPs)
chr8 (9-87)||(39071679-39071759)
chr8 (9-92)||(23663859-23663944)
chr8 (9-92)||(23698589-23698674)
chr8 (9-87)||(8316933-8317013)
chr8 (9-87)||(22915703-22915783)
chr8 (9-92)||(12273198-12273283)
chr8 (9-87)||(13186063-13186143)
chr8 (9-87)||(40318309-40318389)
chr8 (28-92)||(7295291-7295357)
chr8 (28-91)||(38862927-38862992)
chr8 (9-87)||(4995002-4995081)
chr8 (28-94)||(12198946-12199014)
chr8 (28-94)||(12443374-12443442)
chr8 (9-87)||(16388871-16388951)
chr8 (9-87)||(31608858-31608938)
chr8 (9-87)||(42803563-42803643)
chr8 (35-92)||(1425051-1425110)
chr8 (9-93)||(7983425-7983511)
chr8 (28-92)||(34060487-34060553)
chr8 (46-92)||(34176443-34176490)
chr8 (9-92)||(10445678-10445763)
chr8 (28-87)||(12272921-12272982)
chr8 (28-87)||(20385571-20385632)
chr8 (28-87)||(20386794-20386855)
chr8 (28-87)||(38956036-38956097)
chr8 (35-92)||(23663543-23663602)
chr8 (28-87)||(23698311-23698373)
chr8 (35-92)||(39072012-39072071)
chr8 (28-92)||(16388581-16388647)
chr8 (28-92)||(33357496-33357562)
chr8 (11-87)||(38955706-38955784)
chr8 (9-84)||(2535895-2535972)
chr8 (28-87)||(5960049-5960110)
chr8 (28-87)||(40317967-40318028)
chr8 (9-54)||(15229969-15230014)
chr8 (9-91)||(25124562-25124646)
[»] chr4 (54 HSPs)
chr4 (11-97)||(44967385-44967473)
chr4 (12-87)||(24711114-24711191)
chr4 (11-97)||(7451827-7451915)
chr4 (1-87)||(14801739-14801827)
chr4 (9-87)||(24411361-24411441)
chr4 (9-87)||(37248239-37248319)
chr4 (11-87)||(5368950-5369028)
chr4 (28-96)||(51692883-51692953)
chr4 (9-92)||(50418982-50419067)
chr4 (9-87)||(18831352-18831432)
chr4 (31-97)||(50418661-50418729)
chr4 (11-92)||(13058035-13058118)
chr4 (9-94)||(51692549-51692636)
chr4 (11-87)||(23613312-23613390)
chr4 (12-92)||(34765728-34765810)
chr4 (28-92)||(35027996-35028062)
chr4 (28-87)||(18831681-18831742)
chr4 (28-87)||(37248569-37248630)
chr4 (13-87)||(17356271-17356347)
chr4 (9-87)||(52909256-52909336)
chr4 (28-90)||(54086695-54086759)
chr4 (28-93)||(34765377-34765444)
chr4 (28-92)||(24349672-24349738)
chr4 (28-92)||(24411712-24411778)
chr4 (35-87)||(46661285-46661339)
chr4 (28-87)||(15507676-15507737)
chr4 (12-87)||(15508021-15508097)
chr4 (11-92)||(36009160-36009244)
chr4 (28-87)||(43155532-43155593)
chr4 (14-93)||(43155846-43155927)
chr4 (28-87)||(49879210-49879271)
chr4 (28-94)||(10781848-10781916)
chr4 (28-90)||(11108204-11108268)
chr4 (9-87)||(54087040-54087120)
chr4 (31-97)||(55867481-55867549)
chr4 (31-92)||(39539285-39539348)
chr4 (10-87)||(53129852-53129931)
chr4 (28-96)||(24350796-24350866)
chr4 (9-81)||(27068919-27068993)
chr4 (28-92)||(36008842-36008908)
chr4 (28-88)||(37976155-37976217)
chr4 (28-92)||(37976517-37976583)
chr4 (28-87)||(147322-147383)
chr4 (28-87)||(7452167-7452228)
chr4 (9-76)||(10408232-10408301)
chr4 (28-87)||(13058346-13058407)
chr4 (28-87)||(17355928-17355989)
chr4 (28-87)||(23613642-23613703)
chr4 (28-87)||(44967072-44967133)
chr4 (38-92)||(148129-148185)
chr4 (9-71)||(33247587-33247651)
chr4 (9-87)||(53701815-53701895)
chr4 (31-92)||(24711447-24711510)
chr4 (9-82)||(49879521-49879596)
[»] scaffold0020 (2 HSPs)
scaffold0020 (11-92)||(139670-139753)
scaffold0020 (35-90)||(140012-140069)
[»] chr2 (34 HSPs)
chr2 (12-92)||(11163371-11163453)
chr2 (9-83)||(15848095-15848171)
chr2 (14-87)||(45556115-45556190)
chr2 (9-92)||(36382159-36382244)
chr2 (9-87)||(2318162-2318241)
chr2 (28-87)||(36382491-36382552)
chr2 (28-87)||(36755452-36755513)
chr2 (28-87)||(37895350-37895411)
chr2 (9-92)||(44714106-44714190)
chr2 (28-90)||(6588683-6588747)
chr2 (11-97)||(6657871-6657959)
chr2 (13-87)||(37895696-37895772)
chr2 (1-87)||(39423518-39423606)
chr2 (11-87)||(16099058-16099136)
chr2 (11-83)||(39498317-39498391)
chr2 (28-87)||(6658211-6658272)
chr2 (28-91)||(13692584-13692648)
chr2 (28-87)||(30729624-30729685)
chr2 (28-87)||(36480082-36480143)
chr2 (9-87)||(10712726-10712806)
chr2 (9-87)||(22051338-22051418)
chr2 (9-87)||(34447816-34447896)
chr2 (9-94)||(25231193-25231280)
chr2 (28-93)||(39423879-39423946)
chr2 (35-87)||(3555253-3555307)
chr2 (9-81)||(15604348-15604422)
chr2 (35-87)||(16099395-16099449)
chr2 (9-81)||(28226087-28226161)
chr2 (28-87)||(36479720-36479782)
chr2 (28-92)||(39498643-39498709)
chr2 (28-92)||(44045366-44045432)
chr2 (28-87)||(10713087-10713148)
chr2 (28-87)||(11163057-11163118)
chr2 (28-87)||(25230105-25230166)
[»] scaffold0031 (2 HSPs)
scaffold0031 (9-87)||(68968-69048)
scaffold0031 (28-87)||(69329-69390)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-87)||(37900-37988)
[»] scaffold0007 (2 HSPs)
scaffold0007 (9-94)||(1765-1852)
scaffold0007 (28-87)||(2105-2166)
[»] scaffold0075 (1 HSPs)
scaffold0075 (11-87)||(14737-14815)
[»] scaffold0707 (1 HSPs)
scaffold0707 (28-87)||(6443-6504)
[»] scaffold0128 (1 HSPs)
scaffold0128 (28-90)||(19857-19921)
[»] scaffold0388 (1 HSPs)
scaffold0388 (9-92)||(12582-12667)
[»] scaffold0328 (1 HSPs)
scaffold0328 (9-94)||(11483-11570)


Alignment Details
Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 35512231 - 35512146
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||||  || ||||||||||||||||||||||||||||||    
T  35512231 aagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaaaccta 35512146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 5993972 - 5993887
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||||||   ||||||||||||||||| ||||||||||||  |||| ||||||||||||||||||||||||| ||||    
T  5993972 aagggtaaattgccagaattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 5993887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 39453383 - 39453303
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  |||||||||||| |||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  39453383 aagggtaaattgccaggattagcgattacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 39453303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 11761830 - 11761752
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  11761830 gggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 11761752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 27587229 - 27587151
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  27587229 gggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 27587151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 13362573 - 13362656
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacc 90  Q
    ||||||||||||||| |  ||||||||||| ||||| ||||||||||||  |||| |||||| |||||||||||||||||||||    
T  13362573 aagggtaaattgccatgattagcgattacaaggaccaatttttaaacgacccctaattgcaatgatgaaatacatatttaaacc 13362656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 3529189 - 3529267
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  || |||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  3529189 gggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 3529267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 20814484 - 20814566
Alignment:
Q  13 gtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    ||||||||| |||  |||||||||||| |||| ||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  20814484 gtaaattgctaggattagcgattacagtgaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 20814566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 17202763 - 17202824
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||||||||||||||||  |||| |||||||||||||||||||||||||    
T  17202763 tagcgaatacagggaccgatttttaaacgacccctaattgcaaggatgaaatacatatttaa 17202824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 18670266 - 18670205
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  18670266 tagcgattacagggaccaatttttaaacgacccctacttgcaaggatgaaatacatatttaa 18670205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 20840616 - 20840531
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||| |||  || |||||||||| ||| ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  20840616 aagggtaaattgctaggattaacgattacaggtaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 20840531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 16157200 - 16157280
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  || |||||| ||||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  16157200 aagggtaaattgtcaggattaacgattatagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 16157280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 24547470 - 24547550
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||||||||| | ||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  24547470 aagggtaaattgccaggattagcgattataaggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 24547550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 14194487 - 14194421
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||||| ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  14194487 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 14194421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 5024366 - 5024443
Alignment:
Q  12 ggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||| ||||  |||||||||||  |||| ||||||||||||||  || |||||||||||||||||||||||||    
T  5024366 ggtaaattgtcaggattagcgattacaatgaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 5024443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 13962947 - 13962862
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||| |||||  |||| |||||||||||| ||||||||||||  |||| |||||||||| ||||| |||||||| ||||    
T  13962947 aagggtaaattaccaggattagcaattacagggaccaatttttaaacgacccctaattgcaaggataaaatatatatttaagccta 13962862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 18247150 - 18247089
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||| ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  18247150 tagcgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 18247089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 32242321 - 32242240
Alignment:
Q  13 gtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||| |  |||| |||||||||| | ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  32242321 gtaaattgccatgattagctattacagggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaacccta 32242240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 38475344 - 38475429
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||| ||||  || |||||||| ||||| ||||||||||||  |||| ||||||||||||||| ||||||||| ||||    
T  38475344 aagggtaaattgtcaggattaacgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaagccta 38475429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 16083060 - 16082980
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  || |||||||||||||  |||||||||| |  |||| ||| |||||||||||||||||||||    
T  16083060 aagggtaaattgccaggattatcgattacagggactaatttttaaacaacccctaattggaaggatgaaatacatatttaa 16082980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 17202482 - 17202402
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  |||||||||||| |||| ||||||||||||  |||| ||| |||||||||||| ||||||||    
T  17202482 aagggtaaattgtcaggattagcgattacagtgaccaatttttaaacgacccctaattggaaggatgaaatatatatttaa 17202402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 19892653 - 19892733
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacct--agttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||  |||  || ||||||||| |||| |||||||||||||||  | |||||||||||||||||||||||||    
T  19892653 aagggtaaattgttaggattaacgattacagagaccaatttttaaacgacctctaattgcaaggatgaaatacatatttaa 19892733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28771175 - 28771263
Alignment:
Q  1 aacaataaaagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||| | ||||||||||||| |  ||||||||||| ||||| ||||||||||||  |||| || ||||||| ||||||||||||||    
T  28771175 aacaatacaggggtaaattgccaagattagcgattacatggaccaatttttaaacgacccctaattacaaggatcaaatacatatttaa 28771263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 35920529 - 35920609
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||| ||||||| ||||  ||||||||||||||||| ||||||||||||  |||| |||| | ||||||||||||||||||    
T  35920529 aaggataaattgtcaggattagcgattacagggaccaatttttaaacgacccctaattgctatgatgaaatacatatttaa 35920609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 28770933 - 28770866
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||| |||||||||||||| |||||    
T  28770933 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctat 28770866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 35512480 - 35512539
Alignment:
Q  30 gcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||| |||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  35512480 gcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 35512539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 186790 - 186844
Alignment:
Q  35 tacagggaccgatttttaaacgacct--agttgcaaggatgaaatacatatttaa 87  Q
    |||||||||| |||||||||||||||  | |||||||||||||||||||||||||    
T  186790 tacagggaccaatttttaaacgacctctaattgcaaggatgaaatacatatttaa 186844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 21265493 - 21265567
Alignment:
Q  15 aaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||| |  ||||||||||||| ||| ||||||||||||||  || ||| |||||||||||||||||||||    
T  21265493 aaattgccacgattagcgattacaggaaccaatttttaaacgacccttaattgtaaggatgaaatacatatttaa 21265567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 6150532 - 6150447
Alignment:
Q  14 taaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    ||||||| ||||  ||| ||||||| | ||| ||||||||||||||  || ||||||||||||||||||||||||| ||| |||||    
T  6150532 taaattgtcaggattagtgattacatgaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctttattt 6150447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 11762081 - 11762142
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  11762081 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 11762142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 39453663 - 39453724
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||| ||||  || |||||||||||||||||||||||||    
T  39453663 tagcgaatacagggaccaatttttaaatgacccctaattgcaaggatgaaatacatatttaa 39453724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 42265799 - 42265738
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||| ||||| |||||||||||||||||||    
T  42265799 tagcgaatacagggaccaatttttaaacgacccctaattgcagggatgaaatacatatttaa 42265738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 43159178 - 43159243
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacct 91  Q
    |||||| ||||  |||| ||||||||||||||  || |||||||||||||||||||||||||||||    
T  43159178 tagcgaatacaacgaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaacct 43159243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 13362282 - 13362245
Alignment:
Q  58 cctagttgcaaggatgaaatacatatttaaacctatat 95  Q
    |||| |||||||||||||||||||||||||||||||||    
T  13362282 cctaattgcaaggatgaaatacatatttaaacctatat 13362245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 11047813 - 11047864
Alignment:
Q  41 gaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacc 90  Q
    |||| ||||||||||||||  || ||||||||||||||||||||||||||||    
T  11047813 gaccaatttttaaacgacccctacttgcaaggatgaaatacatatttaaacc 11047864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 20840801 - 20840868
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    ||||||||||||  ||| ||||||||||||||  || ||| ||||||||||||||||||||| |||||    
T  20840801 tagcgattacagttaccaatttttaaacgacccctaattgtaaggatgaaatacatatttaagcctat 20840868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 27587479 - 27587550
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    |||||| |||| ||||| ||||||||||||||  || |||||||||| |||||||||||||| || ||||||    
T  27587479 tagcgaatacaaggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccaatattt 27587550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 3528930 - 3528876
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||| ||||||||||||||  || |||||||||| ||||||||||||||    
T  3528930 tacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 3528876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 19892365 - 19892311
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||| ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  19892365 tacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 19892311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 24547241 - 24547175
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||||||| |||||| |||||  |||| |||||||||| || ||||||||||| ||||    
T  24547241 tagcgattacagggaccaattttttaacgacccctaattgcaaggatcaagtacatatttaagccta 24547175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 28269486 - 28269420
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| ||| |||||| ||||||||||||||  || |||||| |||||||||||||||||| ||||    
T  28269486 tagcgaatactgggaccaatttttaaacgacccctaattgcaatgatgaaatacatatttaagccta 28269420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 11740733 - 11740688
Alignment:
Q  46 atttttaaacgacc--tagttgcaaggatgaaatacatatttaaac 89  Q
    ||||||||||||||  || |||||||||||||||||||||||||||    
T  11740733 atttttaaacgacccctaattgcaaggatgaaatacatatttaaac 11740688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 11741881 - 11741942
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| ||||| |||||||||||||| ||||  || || ||||||||||||||||||||||    
T  11741881 tagcgaatacagagaccgatttttaaatgacccctaattacaaggatgaaatacatatttaa 11741942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 18247440 - 18247501
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| ||||| |||| | ||||||||||||  || |||||||||||||||||||||||||    
T  18247440 tagcgaatacagagaccaaattttaaacgacccctaattgcaaggatgaaatacatatttaa 18247501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 5835790 - 5835854
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaaacc 90  Q
    |||||| |||||  ||| |||||||||| ||  ||| ||||||||||||||||||||||||||||    
T  5835790 tagcgaatacagaaaccaatttttaaacaactcctaattgcaaggatgaaatacatatttaaacc 5835854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 92
Target Start/End: Original strand, 6150802 - 6150850
Alignment:
Q  46 atttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  6150802 atttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 6150850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 8322779 - 8322827
Alignment:
Q  39 gggaccgatttttaaacgacc--tagttgcaaggatgaaatacatattt 85  Q
    |||||| ||||||||||||||  || |||||||||||||||||||||||    
T  8322779 gggaccaatttttaaacgacccctaattgcaaggatgaaatacatattt 8322827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 27937347 - 27937424
Alignment:
Q  10 agggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||| ||  || |||||||  ||| | ||||||||||||||  || |||||||||||||||||||||||||    
T  27937347 agggtaaattgccgggattaacgattac--ggatcaatttttaaacgacccataattgcaaggatgaaatacatatttaa 27937424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 5024065 - 5024022
Alignment:
Q  46 atttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||  || |||||||||||||||||||||||||    
T  5024065 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 5024022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 38442449 - 38442492
Alignment:
Q  46 atttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||  || |||||||||||||||||||||||||    
T  38442449 atttttaaacgacccctaattgcaaggatgaaatacatatttaa 38442492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 3e-22; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 6367645 - 6367565
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  6367645 aagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 6367565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 23209672 - 23209757
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  ||||||||||| ||||| ||||||||||||  |||| ||||||||||||||||||||||||| ||||    
T  23209672 aagggtaaattgccaggattagcgattacaaggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 23209757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13914404 - 13914492
Alignment:
Q  1 aacaataaaagggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||| |||||||||||||||||  ||||||||||| ||||| |||||||||| ||  ||| |||||||||||||||||||||||||    
T  13914404 aacaatacaagggtaaattgccaggattagcgattacatggaccaatttttaaacaacctctaattgcaaggatgaaatacatatttaa 13914492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 34464532 - 34464452
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||| |  ||||||||||| ||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  34464532 aagggtaaattgccaagattagcgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 34464452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 40772586 - 40772510
Alignment:
Q  13 gtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||| ||||  ||||||||||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  40772586 gtaaattgtcaggattagcgattacagggaccaatttttaaacgacccataattgcaaggatgaaatacatatttaa 40772510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 36694593 - 36694680
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||||||||| ||||  |||||||||||| |||| |||||||||| ||  ||| ||||||||||||||||||||||||| ||||||    
T  36694593 aagggtaaattgtcaggattagcgattacagagaccaatttttaaacaacacctaattgcaaggatgaaatacatatttaagcctata 36694680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 36710694 - 36710781
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||||||||| ||||  |||||||||||| |||| |||||||||| ||  ||| ||||||||||||||||||||||||| ||||||    
T  36710694 aagggtaaattgtcaggattagcgattacagagaccaatttttaaacaacacctaattgcaaggatgaaatacatatttaagcctata 36710781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 43759186 - 43759257
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    |||||| |||||||||||||||||||||||  |||| ||||||||||||||||||||||||| |||| ||||    
T  43759186 tagcgaatacagggaccgatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctaaattt 43759257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 17692549 - 17692611
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaa 88  Q
    ||||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  17692549 tagcgataacagggaccgatttttaaacgacccctaattgcaaggatgaaatacatatttaaa 17692611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 25647965 - 25647887
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  || |||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  25647965 gggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 25647887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 34464794 - 34464884
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    ||||||||||||||| |  ||||||||||| ||||| |||||||||| |||  || ||||||||||||||||||||||||| |||| ||||    
T  34464794 aagggtaaattgccaagattagcgattacatggaccaatttttaaacaacccctaattgcaaggatgaaatacatatttaagcctaaattt 34464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 37578256 - 37578190
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||||| ||||||||||||||  || ||||||||||||||||||||||||||||||    
T  37578256 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaaccta 37578190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 19017974 - 19018059
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  |||||| |||| ||||| ||||||||||||||  || |||||||||| |||||||||||||| ||||    
T  19017974 aagggtaaattgccaggattagcgaatacatggaccaatttttaaacgacctgtaattgcaaggataaaatacatatttaagccta 19018059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 35152426 - 35152341
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||| |||   ||||||||| ||||||| |||||||||||||  ||| ||||||||||||||||||||||||| ||||    
T  35152426 aagggtaaattggcagtattagcgattatagggaccaatttttaaacgacctctaattgcaaggatgaaatacatatttaagccta 35152341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 41098816 - 41098731
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||| ||||  |||||||||||| |||| ||||||||||||  |||| ||||||| ||||||||||||||||| ||||    
T  41098816 aagggtaaattgtcaggattagcgattacagagaccaatttttaaacgacccctaattgcaagaatgaaatacatatttaagccta 41098731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 24009886 - 24009970
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacct 91  Q
    |||||||||||||||||  | |||||||||  |||| ||||||||||||  |||| |||||||||||||||||| ||||||||||    
T  24009886 aagggtaaattgccaggattggcgattacaatgaccaatttttaaacgatccctaattgcaaggatgaaatacaaatttaaacct 24009970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 26024506 - 26024426
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  |||||||||||| |||| ||||||||||||  |||| ||||||| || ||||||||||||||    
T  26024506 aagggtaaattgccaggattagcgattacagagaccaatttttaaacgacccctaattgcaagaatcaaatacatatttaa 26024426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 35473705 - 35473629
Alignment:
Q  18 ttgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  35473705 ttgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggattaaatacatatttaagccta 35473629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 47999439 - 47999523
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctat 93  Q
    ||||||||||||| |  ||||||||||||||||| ||||||||||||  |||| || ||||||| |||||||||||||| |||||    
T  47999439 gggtaaattgccaagattagcgattacagggaccaatttttaaacgacccctaattacaaggatcaaatacatatttaagcctat 47999523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 46163113 - 46163030
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacc 90  Q
    |||||||||||| ||||  ||||||||||| ||||| ||||||||||||  |||| || ||| |||||||||||||||||||||    
T  46163113 aagggtaaattgtcaggattagcgattacatggaccaatttttaaacgacccctaattacaatgatgaaatacatatttaaacc 46163030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 1103544 - 1103463
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggacc--gatttttaaacgac--ctagttgcaaggatgaaatacatattta 86  Q
    |||||||||||||||||  |||||||||||||||||   |||||||||||||  ||| |||||| |||||||||||||||||    
T  1103544 aagggtaaattgccaggattagcgattacagggaccaatatttttaaacgacctctaattgcaaagatgaaatacatattta 1103463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 183538 - 183622
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga---cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||| |||  ||||||||||||||||| ||||||||||||   |||| || ||||||| |||||||||||||| ||||    
T  183538 gggtaaattgctaggattagcgattacagggaccaatttttaaacgaccccctaattacaaggatcaaatacatatttaagccta 183622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 6367926 - 6367987
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  6367926 tagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 6367987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 26024756 - 26024817
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  26024756 tagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 26024817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 40772823 - 40772884
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||||||||| ||||||||  || |||||||||||||||||||||||||    
T  40772823 tagcgaatacagggaccgattttcaaacgacccctaattgcaaggatgaaatacatatttaa 40772884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 17662195 - 17662275
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  || |||||| ||| ||| ||||||||||||  || | |||||||||||||||||||||||||    
T  17662195 aagggtaaattgccaggattaacgattaaaggaaccaatttttaaacgaccccaaattgcaaggatgaaatacatatttaa 17662275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 34850410 - 34850490
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||| |||| |||  |||||| |||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  34850410 aagggtaatttgcaaggattagcgaatacagggaccaatttttaaacgacccctaattgcaaggattaaatacatatttaa 34850490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 37578537 - 37578617
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  |||||||||||   ||| ||||||||||||  || | |||||||||||||||||||||||||    
T  37578537 aagggtaaattgccaggattagcgattacaaaaaccaatttttaaacgacccccaattgcaaggatgaaatacatatttaa 37578617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 42248556 - 42248476
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||| |  |||||| ||||  |||| ||||||||||||||  || |||||||||||||||||||||||||    
T  42248556 aagggtaaattgccacgattagcgactacaaagaccaatttttaaacgaccactaattgcaaggatgaaatacatatttaa 42248476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 42533070 - 42533019
Alignment:
Q  46 atttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatat 95  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  42533070 atttttaaacgacccctaattgcaaggatgaaatacatatttaaacctatat 42533019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 19515902 - 19515816
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    ||||||||||| ||||   || ||||||||  |||| ||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  19515902 aagggtaaatttccagaattaacgattacaaagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 19515816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 30711691 - 30711757
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| ||||| |||| ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  30711691 tagcgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 30711757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 1103825 - 1103886
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||||||||| ||||||||    
T  1103825 tagcgaatacagggaccaatttttaaacgacctttaattgcaaggatgaaatatatatttaa 1103886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 47999187 - 47999126
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  47999187 tagcgaatacagggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaa 47999126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 7821037 - 7820957
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||  |||  ||||||||||||||||  ||| ||||| ||||  || |||||||||||||||||||||||||    
T  7821037 aagggtaaattgtaaggattagcgattacagggactaattattaaaggacccctaattgcaaggatgaaatacatatttaa 7820957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 34849094 - 34849014
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||| |||| |||  |||||| |||||||||| ||||||||| ||||  || |||||||||| ||||||||||||||    
T  34849094 aagggtaatttgcaaggattagcgaatacagggaccaatttttaaaagacccctaattgcaaggattaaatacatatttaa 34849014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 40210715 - 40210795
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacg--acctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||||   |||||||||||  |||| |||||||||||   |||| |||||| ||||||||||||||||||    
T  40210715 aagggtaaattgccagaattagcgattacaaagaccaatttttaaacggcccctaattgcaatgatgaaatacatatttaa 40210795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 40435396 - 40435344
Alignment:
Q  41 gaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacct 91  Q
    |||| ||||||||||||||  || |||||||||||||||||||||||||||||    
T  40435396 gaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaacct 40435344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 1841822 - 1841889
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||| |||||||| | ||||||||||||||  |  || ||||||||||||||||||||||||||||    
T  1841822 tagcgaatacagggaacaatttttaaacgacccctcattacaaggatgaaatacatatttaaacctat 1841889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 36694346 - 36694279
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||| ||||  |||| ||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  36694346 tagcgaatacatagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 36694279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 36710447 - 36710380
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||| ||||  |||| ||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  36710447 tagcgaatacatagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 36710380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 14879054 - 14878980
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacat 81  Q
    ||||||||||||||| |  ||||||||||| | ||| ||||||||||||  |||| |||||||||| ||||||||    
T  14879054 aagggtaaattgccaagattagcgattacatgaaccaatttttaaacgacccctaattgcaaggataaaatacat 14878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 17189037 - 17188963
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacat 81  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| ||  |||| ||||||||| |||| ||||    
T  17189037 aagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 17188963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 17189194 - 17189268
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacat 81  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| |||  ||| ||||||||| |||| ||||    
T  17189194 aagggtaaattgccaggattagcgattacagggactaatttttaaatgacgtctaattgcaaggacgaaacacat 17189268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 17691283 - 17691225
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatt 84  Q
    ||||||||||||||||| ||||||||||||  |||| ||| ||||| ||||||||||||    
T  17691283 tagcgattacagggaccaatttttaaacgacccctacttgtaaggacgaaatacatatt 17691225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 24009632 - 24009578
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||| ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  24009632 tacaaggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 24009578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 49955430 - 49955356
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacat 81  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| ||  |||| ||||||||| |||| ||||    
T  49955430 aagggtaaattgccaggattagcgattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacat 49955356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 183285 - 183224
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||| ||| |||||| ||||||||||||||    
T  183285 tagcgaatacagggaccaatttttaaacgacccctaattgtaaggatcaaatacatatttaa 183224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 17661904 - 17661855
Alignment:
Q  40 ggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  17661904 ggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 17661855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 23209407 - 23209365
Alignment:
Q  46 atttttaaacgacc-tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  23209407 atttttaaacgaccctaattgcaaggatgaaatacatatttaa 23209365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 32917324 - 32917275
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaa 75  Q
    ||||||||||||||||| ||||||||||||  |||| |||||||||||||    
T  32917324 tagcgattacagggaccaatttttaaacgattcctaattgcaaggatgaa 32917275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 35152694 - 35152755
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| ||||| |||  ||||||||||||||  || |||||||||||||||||||||||||    
T  35152694 tagcgaatacagagactaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 35152755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 40210414 - 40210369
Alignment:
Q  48 ttttaaacgacc--tagttgcaaggatgaaatacatatttaaacct 91  Q
    ||||||||||||  || |||||||||||||||||||||||||||||    
T  40210414 ttttaaacgaccactaattgcaaggatgaaatacatatttaaacct 40210369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 46899125 - 46899064
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||| ||||| ||||||||||||||  || ||||| |||||||||||||||||||    
T  46899125 tagcgaatacatggaccaatttttaaacgacccctaattgcatggatgaaatacatatttaa 46899064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Original strand, 49723090 - 49723147
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatat 83  Q
    |||||| |||| ||||| ||||||||||||||  || |||||||||||||||||||||    
T  49723090 tagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatat 49723147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 4960623 - 4960543
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||| |||  |||||| ||||  || | ||||||||||||||  || |||||| ||||||||||||||||||    
T  4960623 aagggtaaattgcaaggattagcgaatacaaagagcaatttttaaacgacccctaattgcaatgatgaaatacatatttaa 4960543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 30322761 - 30322798
Alignment:
Q  58 cctagttgcaaggatgaaatacatatttaaacctatat 95  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  30322761 cctaattgcagggatgaaatacatatttaaacctatat 30322798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 30711410 - 30711330
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||| |||||||| |||  ||||||||| || || | |||||||||| |||  || |||||||||||||||||||||||||    
T  30711410 aaggataaattgctaggattagcgattatagagatcaatttttaaacaacccctaattgcaaggatgaaatacatatttaa 30711330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 41099097 - 41099157
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatattta 86  Q
    |||||| ||||| |||| |||||||||||||  ||| ||| ||||||||||||||||||||    
T  41099097 tagcgaatacagagaccaatttttaaacgaccactaattgtaaggatgaaatacatattta 41099157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 5734073 - 5734007
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    ||||||||||| | ||| ||||||||||||||  || ||||||||| ||||||||||||||| |||||    
T  5734073 tagcgattacatg-accaatttttaaacgacccctaattgcaaggacgaaatacatatttaagcctat 5734007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 33517617 - 33517530
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||  |||| || |||||||||||||||||||||||| ||||    
T  33517617 aagggtaaattgccaggattagcgattacagggaccaatttttaaacgatccctaattacaaggatgaaatacatatttaaacatata 33517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 30337532 - 30337447
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  30337532 aagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 30337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 30803944 - 30803855
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaaacctatatt 96  Q
    |||||||||||||||||  || ||||||||  || | |||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  30803944 aagggtaaattgccaggattaacgattacatagatcaatttttaaacgacacctagttgcaaggatgaaatacatatttaaccctatatt 30803855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 21628058 - 21628138
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  ||||||||||||||||| |||||||| |||  |||| |||||||||||||||||||||||||    
T  21628058 aagggtaaattgtcaggattagcgattacagggaccaatttttaagcgacccctaattgcaaggatgaaatacatatttaa 21628138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 30725842 - 30725763
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga-cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  |||||||||||| |||| |||||||||||| |||| ||||||| |||||||||||||||||    
T  30725842 aagggtaaattggcaggattagcgattacagagaccaatttttaaacgaccctaattgcaagaatgaaatacatatttaa 30725763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 3059340 - 3059253
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctata 94  Q
    ||||||||||||| |||  ||||||||||| ||||    ||||||||||||  || ||||||||||||||||||||||||||||||||    
T  3059340 aagggtaaattgctaggattagcgattacatggacaatattttaaacgacccttaattgcaaggatgaaatacatatttaaacctata 3059253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 30726123 - 30726190
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||| |||||||||| ||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  30726123 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 30726190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 3059620 - 3059690
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatatt 96  Q
    |||||| |||||||||| ||||||||||||||  || ||||||||||||||||||||||||| ||| ||||    
T  3059620 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctttatt 3059690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 12080717 - 12080639
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||| |  ||||||||||||||| | ||||||||||||  |||| |||||||||||||||||| ||||||    
T  12080717 gggtaaattgccatgattagcgattacagggagcaatttttaaacgacccctaattgcaaggatgaaatacaaatttaa 12080639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 33647315 - 33647381
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||||| ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  33647315 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 33647381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 33517898 - 33517959
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  33517898 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 33517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 12081000 - 12081066
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||||  |||||||||||||  ||| ||||||||||||||||||||||||| ||||    
T  12081000 tagcgaatacagggacaaatttttaaacgactcctaattgcaaggatgaaatacatatttaagccta 12081066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 30804225 - 30804291
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||| | ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  30804225 tagcgaatacagggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaatccta 30804291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 11434866 - 11434805
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||| ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  11434866 tagcgaatacatggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 11434805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 26463262 - 26463177
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||| ||||||||  || ||| |||||||||| ||||||||||||  |||| ||||| |||| |||||||||||||| ||||    
T  26463262 aagggtaatttgccaggattaacgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaagccta 26463177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 30337782 - 30337843
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||||| ||||||||| ||  |||| |||||||||| ||||||||||||||    
T  30337782 tagcgattacagggaccaatttttaaatgacccctaattgcaaggatcaaatacatatttaa 30337843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 13379846 - 13379914
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||| |||||||||| ||||||||||||  |||| ||||| |||| |||||||||||||| ||||||    
T  13379846 tagcgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaagcctata 13379914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 681092 - 681159
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||| ||||| |||| ||||||||||||||  || |||||||||| |||||||||||||| |||||    
T  681092 tagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctat 681159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 22617929 - 22617882
Alignment:
Q  46 atttttaaacgac--ctagttgcaaggatgaaatacatatttaaacct 91  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||    
T  22617929 atttttaaacgactcctaattgcaaggatgaaatacatatttaaacct 22617882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 15115400 - 15115342
Alignment:
Q  31 cgattacagggaccgatttttaaacgacct--agttgcaaggatgaaatacatatttaa 87  Q
    |||||| ||||||| |||||||||||| ||  | |||||||||||||||||||||||||    
T  15115400 cgattatagggaccaatttttaaacgatctctaattgcaaggatgaaatacatatttaa 15115342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 679930 - 679869
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| ||||| |||| ||||||||||||||  || |||||||||| ||||||||||||||    
T  679930 tagcgaatacagagaccaatttttaaacgacccttaattgcaaggatcaaatacatatttaa 679869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 8090272 - 8090357
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||| |||| |||  ||| || |||| ||||| ||||||||||||||  || ||||||||||| ||||||||||||| ||||    
T  8090272 aagggtaatttgcaaggattagtgaatacaaggaccaatttttaaacgacccctaattgcaaggatgtaatacatatttaagccta 8090357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 17734508 - 17734588
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||  |||  ||||||||||| ||| | ||||||||||||||  || ||| |||||| ||||||||||||||    
T  17734508 aagggtaaattgataggattagcgattacatggatcaatttttaaacgacccataattgtaaggatcaaatacatatttaa 17734588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 5e-21; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 28469353 - 28469439
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||||||||||||||  || |||||||||||||| ||||||||||||  |||| ||||||||||||||||||||||||| |||||    
T  28469353 aagggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 28469439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 10935877 - 10935797
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||||||||||| ||||||    
T  10935877 aagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacacatttaa 10935797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 32299050 - 32299130
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  32299050 aagggtaaattgccaggattagcgattacagggaccaatttttaaacgactcctaattgcaaggatcaaatacatatttaa 32299130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 6253552 - 6253474
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  6253552 gggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 6253474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 17102101 - 17102023
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  17102101 gggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 17102023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24388910 - 24388822
Alignment:
Q  1 aacaataaaagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||| ||||||||||||||| |  |||||| ||||| |||| ||||||||||||||  || |||||||||||||||||||||||||    
T  24388910 aacaatacaagggtaaattgccatgattagcgaatacagagaccaatttttaaacgacccataattgcaaggatgaaatacatatttaa 24388822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 37656931 - 37656851
Alignment:
Q  13 gtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacct 91  Q
    ||||||||| |||  |||||||||||| |||| ||||||||||||  |||| |||||||||||||||||||||||||||||    
T  37656931 gtaaattgcgaggattagcgattacagagaccaatttttaaacgattcctaattgcaaggatgaaatacatatttaaacct 37656851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 27396959 - 27397025
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||||||| ||||||||||||  |||| ||||||||||||||||||||||||| ||||    
T  27396959 tagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 27397025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 42731500 - 42731422
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  ||||||||||| ||||| ||||||||||||  |||| |||||||||||| ||||||||||||    
T  42731500 gggtaaattgccaggattagcgattacaaggaccaatttttaaacgacccctaattgcaaggatgagatacatatttaa 42731422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 6571096 - 6571016
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  || |||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  6571096 aagggtaaattgtcaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 6571016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 20426676 - 20426760
Alignment:
Q  10 agggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||| |||||||  |||||| |||||||||| |||||||||||||  ||| ||||| ||||||||||||||||||| ||||    
T  20426676 agggtaaaatgccaggattagcgaatacagggaccaatttttaaacgacctctaattgcagggatgaaatacatatttaagccta 20426760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 27991820 - 27991742
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  ||||||||||||||| | |||| |||||||  |||| |||||||||| ||||||||||||||    
T  27991820 gggtaaattgccaggattagcgattacagggatcaatttctaaacgacccctaattgcaaggatcaaatacatatttaa 27991742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 45010949 - 45011034
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||| |||  |||||| |||| | ||| ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  45010949 aagggtaaattgcaaggattagcgaatacatgaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 45011034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 19204572 - 19204492
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||||   || |||||||||||||| ||||||||||||  |||| || ||||||| ||||||||||||||    
T  19204572 aagggtaaattgccagaattaacgattacagggaccaatttttaaacgacccctaatttcaaggatcaaatacatatttaa 19204492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 22871622 - 22871702
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||| |||  |||| |||||||||||| ||||||||| ||  |||| |||||||||| ||||||||||||||    
T  22871622 aagggtaaattgcaaggattagctattacagggaccaatttttaaatgacccctaattgcaaggatcaaatacatatttaa 22871702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 23181339 - 23181419
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||| |  ||||||||||| ||||| || |||||||||  |||| |||||| ||||||||||||||||||    
T  23181339 aagggtaaattgccaagattagcgattacatggaccaatatttaaacgacccctaattgcaatgatgaaatacatatttaa 23181419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40379860 - 40379768
Alignment:
Q  1 aacaataaaagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacct 91  Q
    ||||||| || |||||||||| |||  |||||| ||||  |||| ||||||||||||||  || ||||||||||||||||||||||| |||||    
T  40379860 aacaatacaaaggtaaattgcaaggattagcgaatacaaagaccaatttttaaacgacccctaattgcaaggatgaaatacatattttaacct 40379768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 27992072 - 27992135
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaac 89  Q
    |||||| |||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||||    
T  27992072 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaaac 27992135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 42019946 - 42020025
Alignment:
Q  13 gtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacc 90  Q
    ||||||||||| |  ||||||||| ||| ||| |||||||||| |||  || ||||||||||||||||||||||||||||    
T  42019946 gtaaattgccaagattagcgattataggaaccaatttttaaacaacccctaattgcaaggatgaaatacatatttaaacc 42020025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 5457251 - 5457337
Alignment:
Q  8 aaagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||| |||| |||  || ||| |||| ||||| ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  5457251 aaagggtaatttgcaaggattaacgaatacaaggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 5457337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 48788867 - 48788801
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||||| ||||||||||||  |||| ||||||| ||||||||||||||||| ||||    
T  48788867 tagcgaatacagggaccaatttttaaacgacccctaattgcaagaatgaaatacatatttaagccta 48788801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 24389149 - 24389210
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||| ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  24389149 tagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 24389210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 42019661 - 42019600
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||| ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  42019661 tagcgaatacatggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 42019600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 42362533 - 42362453
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||| |||| |||  || ||| |||| ||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  42362533 aagggtaatttgcaaggattaacgaatacaaggaccaatttttaaacgacacctaattgcaaggatgaaatacatatttaa 42362453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 28105558 - 28105499
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||  ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  28105558 tacagggacaaatttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 28105499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 32053197 - 32053146
Alignment:
Q  38 agggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||||||||||  || || ||||||||||||||||||||||    
T  32053197 agggaccgatttttaaacgacccataattacaaggatgaaatacatatttaa 32053146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 37657208 - 37657271
Alignment:
Q  35 tacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctatatt 96  Q
    |||||||| | ||||||||||||  |||| ||||||||||||||||||||||||| || |||||    
T  37657208 tacagggatcaatttttaaacgatccctaattgcaaggatgaaatacatatttaagccaatatt 37657271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 40380050 - 40380109
Alignment:
Q  30 gcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    |||| |||| ||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  40380050 gcgaatacatggaccaatttttaaacgactcctaattgcaaggatgaaatacatatttaa 40380109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 17102353 - 17102419
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||| ||||| ||||||||||||||  || |||||||||| |||||||||||||| ||||    
T  17102353 tagcgaatacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 17102419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 42618254 - 42618340
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||||||||||||||  ||||||||||||| ||  ||||||||| ||  |||| ||||||||| |||| ||||  ||||||||||    
T  42618254 aagggtaaattgccaggattagcgattacaggaactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctat 42618340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 47946833 - 47946899
Alignment:
Q  23 aggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||| |||||| ||||| |||||||||||||||||  |||| || ||||||| ||||||||||||||    
T  47946833 agggatagcgaatacagagaccgatttttaaacgattcctaattacaaggataaaatacatatttaa 47946899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 47952263 - 47952329
Alignment:
Q  23 aggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||| |||||| ||||| |||||||||||||||||  |||| || ||||||| ||||||||||||||    
T  47952263 agggatagcgaatacagagaccgatttttaaacgattcctaattacaaggataaaatacatatttaa 47952329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 2640242 - 2640181
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||| ||| ||||||||||||||  || ||| |||||||||||||||||||||    
T  2640242 tagcgaatacaggtaccaatttttaaacgacccctaattgtaaggatgaaatacatatttaa 2640181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 6253804 - 6253865
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||| ||||| ||||||||||||||  || |||||||||| ||||||||||||||    
T  6253804 tagcgaatacaaggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 6253865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 10936158 - 10936219
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||| ||||| |||||||||| |||  || |||||||||||||||||||||||||    
T  10936158 tagcgaatacaaggaccaatttttaaacaacccctaattgcaaggatgaaatacatatttaa 10936219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 16803990 - 16804040
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc 59  Q
    ||||||||||||| |||  | ||||||||||||||| ||||||||||||||    
T  16803990 aagggtaaattgctaggattggcgattacagggaccaatttttaaacgacc 16804040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 28469062 - 28469013
Alignment:
Q  40 ggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  28469062 ggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 28469013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 32298841 - 32298780
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| ||||||||||  |||||||||||||  || |||||||||| ||||||||||||||    
T  32298841 tagcgaatacagggaccagtttttaaacgacccctaattgcaaggatcaaatacatatttaa 32298780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 32934431 - 32934347
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacg--acctagttgcaaggatgaaatacatatttaaacct 91  Q
    |||||||||||| ||||  |||||||||||| |||  ||||||||| |  ||||| |||||||||||||| ||||  ||||||||    
T  32934431 aagggtaaattgtcaggattagcgattacagcgactaatttttaaatgacacctaattgcaaggatgaaacacatcattaaacct 32934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 2640523 - 2640598
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacata 82  Q
    ||||||||||||||||   |||||||||||| | || ||||||||||||  |||| ||  ||||||||||||||||    
T  2640523 aagggtaaattgccagaattagcgattacagaggccaatttttaaacgacccctaattataaggatgaaatacata 2640598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 18670209 - 18670288
Alignment:
Q  10 agggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||| ||||||| |||  || ||| ||||||||||  |||||||||||||  || |||||||||| ||||||||||||||    
T  18670209 agggcaaattgcaaggattaacgaatacagggaccattttttaaacgacccctaattgcaaggattaaatacatatttaa 18670288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 27396693 - 27396622
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    |||||| |||| ||||| ||||||||||| ||  || || |||||||||||||||||||||| ||| |||||    
T  27396693 tagcgaatacatggaccaatttttaaacggcccctaattacaaggatgaaatacatatttaagcctttattt 27396622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 29141558 - 29141601
Alignment:
Q  46 atttttaaacgacct--agttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  | |||||||||||||||||||||||||    
T  29141558 atttttaaacgacctctaattgcaaggatgaaatacatatttaa 29141601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 42731801 - 42731852
Alignment:
Q  46 atttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatat 95  Q
    ||||||||||||||  || || |||||||||||||||||||||| |||||||    
T  42731801 atttttaaacgacccctaattacaaggatgaaatacatatttaagcctatat 42731852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 5e-21; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 2796262 - 2796172
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||| ||  |||| |||||||||| |||||||||||||| |||||||||    
T  2796262 aagggtaaattgccaggattagcgattacagggaccaatttttaaatgacccctaattgcaaggatcaaatacatatttaagcctatattt 2796172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 9294303 - 9294383
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||||||||| ||||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  9294303 aagggtaaattgccaggattagcgattatagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 9294383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 19741229 - 19741317
Alignment:
Q  1 aacaataaaagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||| ||||||||||||||| |  ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  19741229 aacaatacaagggtaaattgccaagattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 19741317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 23458324 - 23458409
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||| |||  |||||||||||| |||| ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  23458324 aagggtaaattgcaaggattagcgattacagagaccaatttttaaacgacccataattgcaaggatgaaatacatatttaagccta 23458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 42342874 - 42342787
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||||||||||||||  |||| |||||| ||||| ||||||||||||  |||| ||| ||||||||||||||||||||| ||||||    
T  42342874 aagggtaaattgccaggactagcaattacatggaccaatttttaaacgacccctaattgtaaggatgaaatacatatttaagcctata 42342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 40033801 - 40033891
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    |||||||||||||||||  |||| |||| ||  ||| ||||||||||||||  || ||||||||||||||||||||||||| |||||||||    
T  40033801 aagggtaaattgccaggattagcaattatagaaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctatattt 40033891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 33689724 - 33689809
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  ||||||||||| | ||| ||||||||||||  |||| |||||| |||||||||||||||||| ||||    
T  33689724 aagggtaaattgccaggattagcgattacatgaaccaatttttaaacgacccctaattgcaaagatgaaatacatatttaagccta 33689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 46474895 - 46474814
Alignment:
Q  12 ggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacct 91  Q
    |||||||||||| |  |||||||||||| |||| ||||||||||||  |||| |||||| ||||||||||||||||||||||    
T  46474895 ggtaaattgccaagattagcgattacagagaccaatttttaaacgacccctaattgcaaagatgaaatacatatttaaacct 46474814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 40758227 - 40758150
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||| |||  ||||||||||| ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  40758227 gggtaaattgc-aggattagcgattacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 40758150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 51994233 - 51994311
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||   ||||||||||| ||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  51994233 gggtaaattgccagaattagcgattacaaggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaa 51994311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 34142585 - 34142643
Alignment:
Q  31 cgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  34142585 cgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 34142643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 51994028 - 51993960
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||| |||||||||| |||||||||||||  ||| |||||| ||| |||||||||||||| ||||||    
T  51994028 tagcgaatacagggaccaatttttaaacgacctctaattgcaaagatcaaatacatatttaagcctata 51993960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 23458043 - 23457988
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacat 81  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||||||||||||    
T  23458043 tagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaatacat 23457988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 26463678 - 26463631
Alignment:
Q  46 atttttaaacgacc--tagttgcaaggatgaaatacatatttaaacct 91  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||    
T  26463678 atttttaaacgacccttaattgcaaggatgaaatacatatttaaacct 26463631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 40506132 - 40506214
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc---tagttgcaaggatgaaatacatatttaaa 88  Q
    |||||||||||| ||||  || |||||||||| ||| | ||||||| ||||   || ||||||||||||||||||||||||||    
T  40506132 aagggtaaattgtcaggattaacgattacaggaaccaacttttaaatgaccccataattgcaaggatgaaatacatatttaaa 40506214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 3850498 - 3850552
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||| ||||||||||||||  || ||||| |||||||||||||||||||    
T  3850498 tacagggaccaatttttaaacgacccctaattgcagggatgaaatacatatttaa 3850552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 9368669 - 9368723
Alignment:
Q  32 gattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatt 84  Q
    ||||||||||||| ||||||||||||  |||| ||||||||| ||||||||||||    
T  9368669 gattacagggaccaatttttaaacgacccctaattgcaaggacgaaatacatatt 9368723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 19740987 - 19740921
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||||||| ||||||||||||  |||| ||||| | || |||||||||||||| ||||    
T  19740987 tagcgattacagggaccaatttttaaacgatccctaattgcatgaatcaaatacatatttaagccta 19740921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 43384366 - 43384288
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatattt 85  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||||| ||  | || |||||| |||| |||||||||||    
T  43384366 aagggtaaattgtcaggattagcgattacagggaccaatttttaaaggatccgtaattgcaaagatggaatacatattt 43384288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 35712108 - 35712047
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||| ||||| ||||||||| ||  |||| |||||||||||||||||||||||||    
T  35712108 tagcgaatacatggaccaatttttaaatgatccctaattgcaaggatgaaatacatatttaa 35712047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 36150579 - 36150530
Alignment:
Q  40 ggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  36150579 ggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 36150530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 36418052 - 36418113
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||| ||| ||||||||||||||  || || ||||||||||||||||||||||    
T  36418052 tagcgaatacaggaaccaatttttaaacgacccctaattacaaggatgaaatacatatttaa 36418113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 53757087 - 53757148
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||| ||||| |||||||||||||  ||| ||||||| |||||||||||||||||    
T  53757087 tagcgaatacatggaccaatttttaaacgacttctaattgcaagaatgaaatacatatttaa 53757148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 9292294 - 9292246
Alignment:
Q  41 gaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  9292294 gaccaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 9292246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 33689433 - 33689385
Alignment:
Q  41 gaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||| ||||||||||||||  || |||||||||||||||||||||||||    
T  33689433 gaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 33689385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 36417752 - 36417688
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacc 90  Q
    |||||| |||||||||| ||||||||||||  |||| || ||||||||||| |||| ||||||||    
T  36417752 tagcgaatacagggaccaatttttaaacgacccctaattacaaggatgaaagacatgtttaaacc 36417688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 23276330 - 23276405
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatt 84  Q
    |||||| ||||| ||  ||||||||||||||||| ||||||||| ||  |||| ||||| |||||||| |||||||    
T  23276330 gggtaatttgccgggattagcgattacagggaccaatttttaaatgacccctaattgcagggatgaaacacatatt 23276405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 35643932 - 35643865
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaa 76  Q
    |||||||||||||||  ||||||||||||||||  ||||||||| ||  |||| ||||||||| ||||    
T  35643932 gggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaa 35643865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 43384665 - 43384708
Alignment:
Q  46 atttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||  |||| |||||||||||||||||||||||||    
T  43384665 atttttaaacgattcctaattgcaaggatgaaatacatatttaa 43384708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 8e-20; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 39071759 - 39071679
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  ||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  39071759 aagggtaaattgtcaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 39071679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 23663859 - 23663944
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  |||||||||||| |||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  23663859 aagggtaaattgccaggattagcgattacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 23663944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 23698589 - 23698674
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||  |||| || ||||||| |||||||||||||| ||||    
T  23698589 aagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattacaaggatcaaatacatatttaagccta 23698674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 8316933 - 8317013
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||||||||||| ||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  8316933 aagggtaaattgccaggattagcgattacaaggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 8317013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 22915703 - 22915783
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||| |  ||||||||||| ||||| ||||||||||||  ||||||||||||||| ||||||||||||||    
T  22915703 aagggtaaattgccaagattagcgattacatggaccaatttttaaacgatccctagttgcaaggatcaaatacatatttaa 22915783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 12273198 - 12273283
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||| | ||  || |||||||||||||| ||||||||||||  |||| |||||||||| |||||||||||||||||||    
T  12273198 aagggtaaattgacgggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaaaccta 12273283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 13186143 - 13186063
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  ||||||||||| | ||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  13186143 aagggtaaattgtcaggattagcgattacatgaaccaatttttaaacgatccctaattgcaaggatgaaatacatatttaa 13186063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 40318309 - 40318389
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||||||||||| ||||  |||||||||| |  |||| |||||||||||||||||||||||||    
T  40318309 aagggtaaattgccaggattagcgattacatggactaatttttaaacaacccctaattgcaaggatgaaatacatatttaa 40318389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 7295291 - 7295357
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||||||||||||||||||  | || |||||||||| |||||||||||||||||||    
T  7295291 tagcgaatacagggaccgatttttaaacgatccataattgcaaggataaaatacatatttaaaccta 7295357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 38862927 - 38862992
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacct 91  Q
    |||||| ||||| |||| ||||||||||||||  || |||||||||||||||||||||||||||||    
T  38862927 tagcgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaacct 38862992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 4995002 - 4995081
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  ||||||||||||| ||| ||||||||| ||||  || |||||||||||||||||||||||||    
T  4995002 aagggtaaattgtcaggattagcgattacagg-accaatttttaaatgacccctaattgcaaggatgaaatacatatttaa 4995081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 12199014 - 12198946
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctata 94  Q
    ||||||||| ||||||| ||||||||||||||  || |||||||||| |||||||||||||| ||||||    
T  12199014 tagcgattatagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctata 12198946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 12443442 - 12443374
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctata 94  Q
    ||||||||| ||||||| ||||||||||||||  || |||||||||| |||||||||||||| ||||||    
T  12443442 tagcgattatagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctata 12443374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 16388871 - 16388951
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  |||| |||||| | ||| ||||||||| ||||  || |||||||||||||||||||||||||    
T  16388871 aagggtaaattgccaggattagcaattacatgaaccaatttttaaatgacccctaattgcaaggatgaaatacatatttaa 16388951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 31608858 - 31608938
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||| |||  |||||| |||| ||||| ||||||||||||||  || ||||||||||||||||| |||||||    
T  31608858 aagggtaaattgcaaggattagcgaatacatggaccaatttttaaacgacccttaattgcaaggatgaaatacttatttaa 31608938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 42803563 - 42803643
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||| |  | | ||||| ||||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  42803563 aagggtaaattgccacgattggtgattatagggaccaatttttaaacgacttctaattgcaaggatgaaatacatatttaa 42803643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 1425110 - 1425051
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||| ||||||||||||||  || |||||||||| |||||||||||||||||||    
T  1425110 tacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaaaccta 1425051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 7983511 - 7983425
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| ||  |||| ||||||||| |||| ||||| |||| |||||    
T  7983511 aagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacataattaagcctat 7983425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 34060553 - 34060487
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacct--agttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||| ||||| ||||||||||||| |  | ||||||||||||||||||||||||| ||||    
T  34060553 tagcgattacatggaccaatttttaaacgacgtttaattgcaaggatgaaatacatatttaagccta 34060487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 34176490 - 34176443
Alignment:
Q  46 atttttaaacgacc-tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||    
T  34176490 atttttaaacgaccataattgcaaggatgaaatacatatttaaaccta 34176443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 10445678 - 10445763
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacg--acctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| |  ||||| ||||||||| |||| ||||  |||||||||    
T  10445678 aagggtaaattgccaggattagcgattacagggactaatttttaaatgacacctaattgcaaggacgaaacacatcattaaaccta 10445763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 12272982 - 12272921
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| |||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  12272982 tagcgattacagagaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaa 12272921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 20385632 - 20385571
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  20385632 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 20385571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 20386794 - 20386855
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  20386794 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 20386855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 38956036 - 38956097
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  38956036 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 38956097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 23663602 - 23663543
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||| ||||||||||||||  || ||||||||||||||| ||||||||| ||||    
T  23663602 tacagggaccaatttttaaacgacccctaattgcaaggatgaaatgcatatttaagccta 23663543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 23698373 - 23698311
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga---cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||||  ||||||||||||   |||| |||||||||| ||||||||||||||    
T  23698373 tagcgattacagggactaatttttaaacgaccccctaattgcaaggatcaaatacatatttaa 23698311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 39072012 - 39072071
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||| ||||||||||||||  |  ||||||||||||||||||||||||| ||||    
T  39072012 tacagggaccaatttttaaacgacccttgattgcaaggatgaaatacatatttaagccta 39072071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 16388647 - 16388581
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| || ||| ||| ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  16388647 tagcgaatataggaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 16388581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 33357562 - 33357496
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||| ||| | ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  33357562 tagcgaatacatggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaagccta 33357496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 38955784 - 38955706
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||| |||||  |||||||||||  |||| ||||||||||||  || | |||||||||| ||||||||||||||    
T  38955784 gggtaaattaccaggattagcgattacaatgaccaatttttaaacgatccccaattgcaaggatcaaatacatatttaa 38955706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 2535895 - 2535972
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatt 84  Q
    |||||||| ||||||||  || |||||||||||||| ||||||||| ||  |||| ||||| ||| ||||||||||||    
T  2535895 aagggtaatttgccaggattaacgattacagggaccaatttttaaatgacccctaattgcagggacgaaatacatatt 2535972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 5960110 - 5960049
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||| | |||||||| |||  |||| ||||||||||||||||||| |||||    
T  5960110 tagcgattacagggagcaatttttaatcgatccctaattgcaaggatgaaatacatgtttaa 5960049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 40318028 - 40317967
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| ||||| |||  ||||||||||||||  || |||||||||||||||||||||||||    
T  40318028 tagcgaatacagagacaaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 40317967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 15230014 - 15229969
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaa 54  Q
    |||||||||||||||||  ||||||||||||||||  |||||||||    
T  15230014 aagggtaaattgccaggattagcgattacagggactaatttttaaa 15229969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 25124646 - 25124562
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacct 91  Q
    |||||||||||||||||  ||||||||||| ||||  ||||||||| ||  |||| ||||||| | |||||||||  ||||||||    
T  25124646 aagggtaaattgccaggattagcgattacatggactaatttttaaatgacgcctaattgcaagaacgaaatacatcattaaacct 25124562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 8e-20; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 44967385 - 44967473
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||  ||| |||||||||| |||||||||||||| |||| ||||    
T  44967385 gggtaaattgccaggattagcgattacagggaccaatttttaaacgacctctaattgcaaggatcaaatacatatttaagcctagattt 44967473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 24711191 - 24711114
Alignment:
Q  12 ggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  24711191 ggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 24711114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 7451915 - 7451827
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    |||||||||||||||  || |||||||||||||| ||||||||||||  |||| |||||||||| |||||||||||||| |||| ||||    
T  7451915 gggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctaaattt 7451827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 14801827 - 14801739
Alignment:
Q  1 aacaataaaagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||| |||||||||||| ||||  |||||||||||  |||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  14801827 aacaatacaagggtaaattgtcaggattagcgattacaaagaccaatttttaaacgactcctaattgcaaggatgaaatacatatttaa 14801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 24411441 - 24411361
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||| |  |||| |||| ||||||||||||||||||||    
T  24411441 aagggtaaattgtcagggttagcgattacagggaccaatttttaaactacccctaattgctaggatgaaatacatatttaa 24411361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 37248319 - 37248239
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||| | ||||||||||||||    
T  37248319 aagggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggttcaaatacatatttaa 37248239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 5369028 - 5368950
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  ||||||||||| ||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  5369028 gggtaaattgccaggattagcgattacaaggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaa 5368950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 51692883 - 51692953
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatatt 96  Q
    |||||| |||||||||| ||||||||||||||  || ||||||||||||||||||||||||| ||||||||    
T  51692883 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctatatt 51692953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 50418982 - 50419067
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||| |||||||||  ||||||||| ||||||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  50418982 aagggtagattgccaggattagcgattagagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 50419067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 18831432 - 18831352
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||||||  |||| ||| |||||| ||||||||||||||    
T  18831432 aagggtaaattaccaggattagcgattacagggaccaatttttaaacgacccctaattgtaaggatcaaatacatatttaa 18831352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 50418729 - 50418661
Alignment:
Q  31 cgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    |||||||||||||| ||||||||||||||  || |||||||||| |||||||||||||| |||||||||    
T  50418729 cgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctatattt 50418661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 13058118 - 13058035
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||| |||||  |||||||||||| |||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  13058118 gggtaaattaccaggattagcgattacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 13058035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 51692636 - 51692549
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacct--agttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||||||||| ||||  |||||||||||  || | |||||||||||||||  | ||||||||||||||||||||||||| ||||||    
T  51692636 aagggtaaattgtcaggattagcgattacatagatcaatttttaaacgacctctaattgcaaggatgaaatacatatttaagcctata 51692549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 23613390 - 23613312
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||| |  ||||||||||| ||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  23613390 gggtaaattgccaagattagcgattacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 23613312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 34765728 - 34765810
Alignment:
Q  12 ggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||||  ||||||||||| | ||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  34765728 ggtaaattgccaggattagcgattacatgaaccaatttttaaacgacccctaattgcaaggataaaatacatatttaagccta 34765810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 35028062 - 35027996
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||| ||| ||||||||||||||  || ||||||||||||||||||||||||||||||    
T  35028062 tagcgaatacaggaaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaaccta 35027996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 18831681 - 18831742
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  18831681 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 18831742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 37248569 - 37248630
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  37248569 tagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 37248630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 17356271 - 17356347
Alignment:
Q  13 gtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||| |  |||||| |||||||||| ||||||||||||||  || ||| |||||||||||||||||||||    
T  17356271 gtaaattgccaagattagcgaatacagggaccaatttttaaacgacccgtaattggaaggatgaaatacatatttaa 17356347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 52909336 - 52909256
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  |||||||||||| |||| |||||| |||||  |||| |||||| ||||||||||||||||||    
T  52909336 aagggtaaattgtcaggattagcgattacagtgaccaatttttgaacgacccctaattgcaaagatgaaatacatatttaa 52909256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 54086759 - 54086695
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacc 90  Q
    |||||| ||||| |||| ||||||||||||||  || ||||||||||||||||||||||||||||    
T  54086759 tagcgaatacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaacc 54086695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 34765444 - 34765377
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||| |||| ||||||||||||||||||||  || |||||||||| |||||||||||||| |||||    
T  34765444 tagcgaatacaaggaccgatttttaaacgacccttaattgcaaggataaaatacatatttaagcctat 34765377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 24349738 - 24349672
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  24349738 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 24349672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 24411712 - 24411778
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||| | ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  24411712 tagcgaatacagggatcaatttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 24411778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 46661285 - 46661339
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  46661285 tacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 46661339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 15507737 - 15507676
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| || ||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  15507737 tagcgaatatagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 15507676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 15508021 - 15508097
Alignment:
Q  12 ggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||| ||||  ||||||||||| ||||  ||||||||||||||  || |||||||||||||||||||||||||    
T  15508021 ggtaaattgtcaggattagcgattacaaggaca-atttttaaacgacccctaattgcaaggatgaaatacatatttaa 15508097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 36009160 - 36009244
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga---cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||| |||||  || |||||||||||||| ||||||||||||   |||| || ||||||| |||||||||||||| ||||    
T  36009160 gggtaaatttccaggattaacgattacagggaccaatttttaaacgaccccctaattacaaggatcaaatacatatttaagccta 36009244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 43155593 - 43155532
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||| ||||||||||||||    
T  43155593 tagcgaatacagggaccaatttttaaacgacccttaattgcaaggatcaaatacatatttaa 43155532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 43155846 - 43155927
Alignment:
Q  14 taaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctat 93  Q
    ||||||||||||  || |||||||||||||| ||||||||||||  |||| ||  |||||| |||||||||||||| |||||    
T  43155846 taaattgccaggattaacgattacagggaccaatttttaaacgacccctaattataaggatcaaatacatatttaagcctat 43155927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 49879271 - 49879210
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||| |||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  49879271 tagcaattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 49879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 10781848 - 10781916
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||| |||| ||||| ||||||||||||||  || |||||||||| |||||||||||||| ||||||    
T  10781848 tagcgaatacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctata 10781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 11108204 - 11108268
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacc 90  Q
    |||||| |||| ||| | ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  11108204 tagcgaatacaaggatcaatttttaaacgatccctaattgcaaggatgaaatacatatttaaacc 11108268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 54087040 - 54087120
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| || |  || |||||||||||||| ||||||||||||  |||| || ||| ||||||||||||||||||    
T  54087040 aagggtaaattgtcatgattaacgattacagggaccaatttttaaacgacccctaattacaatgatgaaatacatatttaa 54087120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 55867481 - 55867549
Alignment:
Q  31 cgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    |||||||| ||||| ||||||||||||||  || ||||| |||| |||||||||||||| |||||||||    
T  55867481 cgattacatggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaagcctatattt 55867549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 39539285 - 39539348
Alignment:
Q  31 cgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||  |||| ||||||||||||||  || ||||||||||||||||||||||||| ||||    
T  39539285 cgattacattgaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaagccta 39539348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 53129852 - 53129931
Alignment:
Q  10 agggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| |||  ||||||||||  ||| | ||||||||||||||  |  |||||||||||||||||||||||||    
T  53129852 agggtaaattgcaaggattagcgattacgaggatcaatttttaaacgacccctgattgcaaggatgaaatacatatttaa 53129931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 24350796 - 24350866
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctatatt 96  Q
    |||||| | |||||||| ||||||||||||||  || |||||||||| |||||||||||||| ||| ||||    
T  24350796 tagcgaatgcagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagcctttatt 24350866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 27068993 - 27068919
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacat 81  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| ||  |||| ||||||||| |||| ||||    
T  27068993 aagggtaaattgccaggattagcgattacagggactaatttttaaatgatgcctaattgcaaggacgaaacacat 27068919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 36008908 - 36008842
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||||| ||||||||||||  |||| || ||||||| |||||||||||||| ||||    
T  36008908 tagcgaatacagggaccaatttttaaacgatccctaattacaaggatcaaatacatatttaagccta 36008842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 37976217 - 37976155
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacct--agttgcaaggatgaaatacatatttaaa 88  Q
    |||||| |||||| |||  ||||||||||||||  | ||||||||||||||||||||||||||    
T  37976217 tagcgaatacaggaaccagtttttaaacgacctctaattgcaaggatgaaatacatatttaaa 37976155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 37976517 - 37976583
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||||| | ||||||||||||  |||| |||| | |||||||||||||||||| ||||    
T  37976517 tagcgattacagggatcaatttttaaacgacccctaattgccatgatgaaatacatatttaagccta 37976583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 147383 - 147322
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||| ||| | |||||||||||||||||||    
T  147383 tagcgaatacagggaccaatttttaaacgacccctaattgtagggatgaaatacatatttaa 147322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 7452167 - 7452228
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| ||||| |||| ||||||||||||||  || |||||||||| ||||||||||||||    
T  7452167 tagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 7452228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 10408232 - 10408301
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaa 76  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| ||  |||| ||||||||| ||||    
T  10408232 aagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaa 10408301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 13058346 - 13058407
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||  |||||||||| ||||||||||||||    
T  13058346 tagcgaatacagggaccaatttttaaacgaccccttattgcaaggatcaaatacatatttaa 13058407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 17355989 - 17355928
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||  ||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  17355989 tagcgaatacagcaaccaatttttaaacgactcctaattgcaaggatgaaatacatatttaa 17355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 23613642 - 23613703
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||| | ||||||||||||||  || |||||||||| ||||||||||||||    
T  23613642 tagcgaatacagggatcaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 23613703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 44967133 - 44967072
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| ||||| |||| ||||||||||||||  || |||||||||| ||||||||||||||    
T  44967133 tagcgaatacagagaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 44967072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 148129 - 148185
Alignment:
Q  38 agggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||| ||||||||||||||  || ||||| ||||||||||||||||||| ||||    
T  148129 agggaccaatttttaaacgacccctaattgcagggatgaaatacatatttaagccta 148185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 33247587 - 33247651
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaagga 71  Q
    |||| ||||||||||||  |||| ||||||||||| |||||||||||||  |||| |||||||||    
T  33247587 aaggctaaattgccaggattagcaattacagggacggatttttaaacgatccctaattgcaagga 33247651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 53701895 - 53701815
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||| ||||||| ||||  ||| |||||||| || | ||||||||||||||  || |||||||||||||||| ||||||||    
T  53701895 aaggataaattgtcaggattagagattacagagatcaatttttaaacgacccctaattgcaaggatgaaatagatatttaa 53701815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 24711447 - 24711510
Alignment:
Q  31 cgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||| ||| ||||| ||||||||||||||  || |||||||||| |||||||||||||| ||||    
T  24711447 cgatgacatggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 24711510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 49879521 - 49879596
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacata 82  Q
    |||||||||||| ||||  |||||||||||| || |  |||||||||||  |||| |||||||||| |||||||||    
T  49879521 aagggtaaattgtcaggattagcgattacagagatcagtttttaaacgacccctaattgcaaggatcaaatacata 49879596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 139753 - 139670
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  139753 gggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaatccta 139670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 140012 - 140069
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacc 90  Q
    |||||||||| |||||||||| |||  || |||||||||| |||||||||||||||||    
T  140012 tacagggaccaatttttaaacaacccctaattgcaaggatcaaatacatatttaaacc 140069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 11163371 - 11163453
Alignment:
Q  12 ggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  11163371 ggtaaattgccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaagccta 11163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 15848171 - 15848095
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatat 83  Q
    ||||||||||| |||||  ||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||    
T  15848171 aagggtaaattaccaggattagcgattacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatat 15848095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 45556190 - 45556115
Alignment:
Q  14 taaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||  |||| |||||||||| ||||||||||||||    
T  45556190 taaattgccaggattagcgattacagggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaa 45556115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 36382244 - 36382159
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||| ||||  ||||||||| ||||||| ||||||||||||  |||| |||||||||||||||||||| |||| ||||    
T  36382244 aagggtaaattgtcaggattagcgattatagggaccaatttttaaacgaaccctaattgcaaggatgaaatacatacttaagccta 36382159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 2318241 - 2318162
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc-tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||||||   |||||||||||  |||| |||||||||| ||| || |||||||||||||||||||||||||    
T  2318241 aagggtaaattgccagaattagcgattacatagaccaatttttaaactaccctaattgcaaggatgaaatacatatttaa 2318162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 36382491 - 36382552
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  36382491 tagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 36382552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 36755452 - 36755513
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||| ||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  36755452 tagcgattatagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 36755513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 37895411 - 37895350
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  37895411 tagcgaatacagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 37895350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 44714106 - 44714190
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  |||| |||||||||||  ||||||||||||  |||| |||||||||||||| |||||||||| ||||    
T  44714106 aagggtaaattgccaggattagcaattacagggactaatttttaaacgacccctaattgcaaggatgaaa-acatatttaagccta 44714190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 6588747 - 6588683
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacc 90  Q
    |||||| |||| ||||| ||||||||||||||  || ||||||||||||||||||||||||||||    
T  6588747 tagcgaatacatggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaaacc 6588683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 6657959 - 6657871
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctatattt 97  Q
    ||||||||||||| |  ||| ||||||||||||| ||||||||||||  || | |||||||||| |||||||||||||| |||| ||||    
T  6657959 gggtaaattgccatgattagtgattacagggaccaatttttaaacgaccccaaattgcaaggatcaaatacatatttaagcctagattt 6657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 37895696 - 37895772
Alignment:
Q  13 gtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||  |||||||||| || |||  |||||||||||||  || |||||||||||||||||||||||||    
T  37895696 gtaaattgccaggattagcgattacgggaaccattttttaaacgacccataattgcaaggatgaaatacatatttaa 37895772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39423606 - 39423518
Alignment:
Q  1 aacaataaaagggtaaattgccaggggtagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||||| |||| |||||||||||   |||||||||||| |||| ||||||||||||||  || || |||||||||||||| |||||||    
T  39423606 aacaatacaaggataaattgccagaattagcgattacagagaccaatttttaaacgacccgtaattacaaggatgaaatacgtatttaa 39423518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 16099136 - 16099058
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  ||| ||||||||||||| ||||||||| ||  |||| ||||||| || ||||||||||||||    
T  16099136 gggtaaattgccaggattagtgattacagggaccaatttttaaatgacccctaattgcaagaatcaaatacatatttaa 16099058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 39498391 - 39498317
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatat 83  Q
    |||||||||||||||  || |||||||||||||| ||||||||||||  |||| || ||||||| ||||||||||    
T  39498391 gggtaaattgccaggattaacgattacagggaccaatttttaaacgacccctaattacaaggatcaaatacatat 39498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 6658211 - 6658272
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| |||||||||||||  ||| |||||||||| ||||||||||||||    
T  6658211 tagcgaatacagggaccaatttttaaacgacctctaattgcaaggatcaaatacatatttaa 6658272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 13692584 - 13692648
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacct 91  Q
    |||||| |||||||||| ||||||||||||  |||| ||||||||||||||||| |||||||||||    
T  13692584 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatac-tatttaaacct 13692648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 30729685 - 30729624
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| || ||||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  30729685 tagcgaatatagggaccaatttttaaacgacgtctaattgcaaggatgaaatacatatttaa 30729624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 36480082 - 36480143
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| || ||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  36480082 tagcgaatatagggaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 36480143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 10712806 - 10712726
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||  ||||| | ||||| ||||||||||||  |||| |||||||||||||||||||| ||||    
T  10712806 aagggtaaattgccaggattaatgattataaggaccaatttttaaacgaaccctaattgcaaggatgaaatacatacttaa 10712726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 22051338 - 22051418
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||||||||| |||  |||||||||||| |||  |||||||||| ||  ||| ||||||| |||||||||||||||||    
T  22051338 aagggtaaattgctaggattagcgattacagagactaatttttaaacaacctctaattgcaagaatgaaatacatatttaa 22051418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 34447896 - 34447816
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||| ||||  | ||||||| ||||||| ||||||||| ||  |||| || ||||||||||||||||||||||    
T  34447896 aagggtaaattgtcaggatttgcgattatagggaccaatttttaaatgacccctaattacaaggatgaaatacatatttaa 34447816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 25231193 - 25231280
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||||| |||| |||  |||||| |||| ||||| ||||||||||||  |||| ||||| |||| |||||||||||||| ||||||    
T  25231193 aagggtaatttgctaggattagcgaatacatggaccaatttttaaacgacccctaattgcagggattaaatacatatttaagcctata 25231280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 39423879 - 39423946
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacctat 93  Q
    |||||| || ||||| | ||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  39423879 tagcgaatatagggatcaatttttaaacgacccctaattgcaaggatgaaatacatatttaagcctat 39423946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 3555307 - 3555253
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    ||||| |||| ||||||||||||||  || |||||||||||||||||||||||||    
T  3555307 tacagagaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 3555253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 15604422 - 15604348
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacg--acctagttgcaaggatgaaatacat 81  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| |  ||||| ||||||||| |||| ||||    
T  15604422 aagggtaaattgccaggattagcgattacagggactaatttttaaatgacacctaattgcaaggacgaaacacat 15604348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 16099395 - 16099449
Alignment:
Q  35 tacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||| ||||||||||||||  || |||||||||| ||||||||||||||    
T  16099395 tacagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 16099449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 28226087 - 28226161
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacat 81  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| ||  |||| ||||||||| |||| ||||    
T  28226087 aagggtaaattgccaggattagcgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacat 28226161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 36479782 - 36479720
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgc-aaggatgaaatacatatttaa 87  Q
    ||||||||||| ||||| ||||||||||||  |||| |||| |||||||||||||||||||||    
T  36479782 tagcgattacatggaccaatttttaaacgacccctaattgcaaaggatgaaatacatatttaa 36479720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 39498643 - 39498709
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||| ||||| ||||||||||||  |||| |||||||||| |||||||||||||| ||||    
T  39498643 tagcgaatacatggaccaatttttaaacgatccctaattgcaaggatcaaatacatatttaagccta 39498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 44045366 - 44045432
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||| |||||||||| ||||||||||||  |||| ||||| |||| |||||||||||||| ||||    
T  44045366 tagcgaatacagggaccaatttttaaacgacccctaattgcagggatcaaatacatatttaagccta 44045432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 10713087 - 10713148
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||  ||| ||||||||||||||  || |||||||||||||||||||||||||    
T  10713087 tagcgaatacagaaaccaatttttaaacgacccttaattgcaaggatgaaatacatatttaa 10713148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 11163118 - 11163057
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||||  || |||||| ||| ||||||||||||||    
T  11163118 tagcgaatacagggaccaatttttaaacgacctttaattgcaaagatcaaatacatatttaa 11163057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 25230166 - 25230105
Alignment:
Q  28 tagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||  |||| ||||| |||| ||||||||||||||    
T  25230166 tagcgaatacagggaccaatttttaaacgacccctaattgcagggattaaatacatatttaa 25230105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 69048 - 68968
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||| ||  |||| |||||||||||||||||||||||||    
T  69048 aagggtaaattgccaggattagtgattacagggaccaatttttaaatgacccctaattgcaaggatgaaatacatatttaa 68968  T

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Target: scaffold0031; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 69329 - 69390
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgac--ctagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| |||||||||||||  ||| |||||||||||||||||||||||||    
T  69329 tagcgaatacagggaccaatttttaaacgacatctaattgcaaggatgaaatacatatttaa 69390  T

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Target: scaffold0005 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37900 - 37988
Alignment:
Q  1 aacaataaaagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    ||||||| |||||||||||| ||||  |||||||||||  |||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  37900 aacaatacaagggtaaattgtcaggattagcgattacaaagaccaatttttaaacgactcctaattgcaaggatgaaatacatatttaa 37988  T

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Target: scaffold0007 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 1852 - 1765
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctata 94  Q
    ||||||||||||||| |  ||||||||||||||||| |||||| |||||  |||| |||||||||| |||||||||||||| ||||||    
T  1852 aagggtaaattgccaagattagcgattacagggaccaattttttaacgacccctaattgcaaggatcaaatacatatttaagcctata 1765  T

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Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 2105 - 2166
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||| ||| |||||||| ||||||||||||||  || |||||||||| ||||||||||||||    
T  2105 tagcaatttcagggaccaatttttaaacgacccctaattgcaaggatcaaatacatatttaa 2166  T

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Target: scaffold0075 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 14737 - 14815
Alignment:
Q  11 gggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaa 87  Q
    |||||||||||||||  ||||||||| || |||| ||||||||||||  |||| ||||||||||||||| |||||||||    
T  14737 gggtaaattgccaggattagcgattagagagaccaatttttaaacgacccctaattgcaaggatgaaattcatatttaa 14815  T

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Target: scaffold0707 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 6443 - 6504
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaa 87  Q
    |||||| |||||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  6443 tagcgaatacagggaccaatttttaaacgacccctaattgcaaggatgaaatacatatttaa 6504  T

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Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 19921 - 19857
Alignment:
Q  28 tagcgattacagggaccgatttttaaacgacc--tagttgcaaggatgaaatacatatttaaacc 90  Q
    ||||||| ||||||||| ||||||||||||||  || ||||||||| ||||||||||||||||||    
T  19921 tagcgatcacagggaccaatttttaaacgacccataattgcaaggacgaaatacatatttaaacc 19857  T

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Target: scaffold0388 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 12582 - 12667
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaaccta 92  Q
    |||||||||||||||||  || |||||||||||||  ||||||||| ||  |||| ||||||||| |||| ||||  |||||||||    
T  12582 aagggtaaattgccaggattaacgattacagggactaatttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 12667  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 11483 - 11570
Alignment:
Q  9 aagggtaaattgccaggggtagcgattacagggaccgatttttaaacga--cctagttgcaaggatgaaatacatatttaaacctata 94  Q
    |||||||||||||||||  || |||||||| ||||  ||||||||| ||  |||| |||||||||||||| ||||  |||| ||||||    
T  11483 aagggtaaattgccaggattaacgattacatggactaatttttaaatgacgcctaattgcaaggatgaaacacatcattaagcctata 11570  T

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