View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2562_high_20 (Length: 390)
Name: NF2562_high_20
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2562_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 1 - 373
Target Start/End: Original strand, 20014816 - 20015188
Alignment:
| Q |
1 |
ttaatttagtgttcttaaaacttaaaatgattatggaatcacctaatatattaggaatgattattagtgaccaagccactggtctaactatataattttg |
100 |
Q |
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| T |
20014816 |
ttaatttagtgttcttaaaacttaaaatgattatggaatcacctaatatattaggaatgattattagtgaccaagccactggtctaactatataattttg |
20014915 |
T |
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| Q |
101 |
ttaaaatttctttaaattaattaatatgaattcaaccaaactaatggccaagtccaaaccaccctttttacatatcccaaccttaatcataattgttaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20014916 |
ttaaaatttctttaaattaattaatatgaattcaaccaaactaatggccaagtccaaaccaccctttttacatatcccaaccttaatcataattgttaat |
20015015 |
T |
|
| Q |
201 |
taaggttgctatttacgtgatgtggatatgaatagtatgaatttcactacttgtcgatgaactaatacacttgctatttatttcatcatcaacgagtaat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20015016 |
taaggttgctatttacgtgatgtggatatgaatagtatgaatttcactacttgtcgatgaactaatacacttgctatttatttcatcatcaacgagtaat |
20015115 |
T |
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| Q |
301 |
gtgaggatgaagatgtgtcaatgactaggaaagtcggtgacgggaataagacacatgcatagatgagacaggt |
373 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20015116 |
gtaaggatgaagatgtgtcaatgactaggaaagtcggtgacgggaataagacacatgcatagatgagacaggt |
20015188 |
T |
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