View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2562_high_25 (Length: 371)

Name: NF2562_high_25
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2562_high_25
NF2562_high_25
[»] chr7 (3 HSPs)
chr7 (26-298)||(45748071-45748342)
chr7 (26-107)||(8268714-8268795)
chr7 (31-106)||(2629061-2629136)
[»] chr6 (7 HSPs)
chr6 (26-107)||(11534302-11534383)
chr6 (26-107)||(11559812-11559893)
chr6 (31-107)||(20747896-20747972)
chr6 (26-107)||(11570340-11570421)
chr6 (26-107)||(25314048-25314129)
chr6 (26-107)||(26201542-26201623)
chr6 (31-107)||(4156949-4157025)
[»] chr2 (3 HSPs)
chr2 (31-99)||(38591638-38591706)
chr2 (26-107)||(19892066-19892146)
chr2 (33-65)||(19542191-19542223)
[»] chr5 (6 HSPs)
chr5 (26-107)||(37248396-37248477)
chr5 (26-73)||(9726381-9726428)
chr5 (26-76)||(26667695-26667745)
chr5 (26-76)||(26939292-26939342)
chr5 (31-73)||(36429137-36429179)
chr5 (26-58)||(13290950-13290982)
[»] chr4 (7 HSPs)
chr4 (26-107)||(19540774-19540855)
chr4 (31-107)||(12823484-12823560)
chr4 (31-73)||(19107036-19107078)
chr4 (26-107)||(8694135-8694215)
chr4 (26-107)||(16421460-16421541)
chr4 (26-107)||(6943202-6943283)
chr4 (26-107)||(32081720-32081801)
[»] chr3 (5 HSPs)
chr3 (26-70)||(27104128-27104172)
chr3 (31-72)||(2207375-2207416)
chr3 (31-107)||(46964435-46964511)
chr3 (26-107)||(757960-758041)
chr3 (33-73)||(18472435-18472475)
[»] chr1 (7 HSPs)
chr1 (26-106)||(47450821-47450901)
chr1 (26-94)||(33300853-33300921)
chr1 (26-73)||(16649262-16649309)
chr1 (26-73)||(26927347-26927394)
chr1 (31-106)||(28434229-28434304)
chr1 (26-107)||(38621126-38621207)
chr1 (26-106)||(39587962-39588042)
[»] chr8 (6 HSPs)
chr8 (26-107)||(15951146-15951227)
chr8 (26-76)||(7002071-7002121)
chr8 (26-107)||(38181838-38181919)
chr8 (26-106)||(1910551-1910631)
chr8 (26-66)||(14035851-14035891)
chr8 (26-106)||(18875984-18876064)
[»] scaffold0352 (1 HSPs)
scaffold0352 (26-73)||(7527-7574)


Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 26 - 298
Target Start/End: Complemental strand, 45748342 - 45748071
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattcacactacactaatttaaa 125  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  45748342 gactttgatcttaaaaatactctttattccgaagagacatatattatcaaattgactatatttttaagatcattcttaattcacactacactaatttaaa 45748243  T
Q  126 acctctgttttaaagttgttgtgagtattgatttaaaaggagtatatggtaccacacacgcagtcaggatagatgatcaaaaggaaatttcctttcactc 225  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  45748242 acctctcttttaaa-ttgttgtgagtattgatttaaaaggagtatatggtagcacacacgcagtcacgatagatgattaaaaggaaatttcctttcactc 45748144  T
Q  226 caccggtaatagatagacattattattattggattggatattgaataaatatttaaaggagtatattcttatt 298  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45748143 caccagtaatagatagacattattattattggattggatattgaataaatatttaaaggagtatattcttatt 45748071  T

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Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 8268714 - 8268795
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||||||||| ||| ||| || ||||||||| |||| |||||||    
T  8268714 gactatgatcttaaaagtactctttattccgaagggacatatattatcgaatggactatgtttttaagaccattcttaattc 8268795  T

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Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 2629061 - 2629136
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaatt 106  Q
    |||||||||||||||||||||||| |||||||| || ||| |||||| ||| ||| | ||||||||||| ||||||    
T  2629061 tgatcttaaaaatactctttattctaaagagacgtaaattgtcaaatagactatactcttaagatcattcttaatt 2629136  T

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Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 11534383 - 11534302
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| || |||||||||| ||| ||||||||||||||||| ||| || ||||||||| ||||||||||||    
T  11534383 gactatgatcttaaaagtattctttattcctaagggacatatattatcaaatggactatgtttttaagaccatttttaattc 11534302  T

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Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 11559893 - 11559812
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||||||||||||| ||| || ||||||||| |||| |||||||    
T  11559893 gactatgatcttaaaagtactctttattccgaagggacatatattatcaaatggactatgtttttaagaccattcttaattc 11559812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 20747972 - 20747896
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||  ||| || |||||||||||||| |||||||    
T  20747972 tgatcttaaaaatattctttattccgaagggacatatattatcaaagggactatgtttttaagatcattcttaattc 20747896  T

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Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 11570421 - 11570340
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||| ||| ||| ||||||||||||| ||| ||| || ||||||||| |||| |||||||    
T  11570421 gactatgatcttaaaagtactctttaatccgaagggacatatattatcgaatggactatgtttttaagaccattcttaattc 11570340  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 25314129 - 25314048
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||||||  ||| ||||||||||||| ||  ||| || |||||||||||||| |||||||    
T  25314129 gactatgatcttaaaagtactctttattctgaagggacatatattatcgaaaggactatgtttttaagatcattcttaattc 25314048  T

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Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 26201623 - 26201542
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||||||  ||| ||||||||||||| ||  ||| || |||||||||||||| |||||||    
T  26201623 gactatgatcttaaaagtactctttattctgaagggacatatattatcgaaaggactatgtttttaagatcattcttaattc 26201542  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 4157025 - 4156949
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    ||||||||| ||||||||||||||| ||| ||| ||||||||  || |||| || ||||||||| |||| |||||||    
T  4157025 tgatcttaataatactctttattccgaagggacttatattattgaagtgactatgtttttaagaccattcttaattc 4156949  T

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Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 38591638 - 38591706
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatt 99  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||| ||| || ||||||||||||||    
T  38591638 tgatcttaaaaatactctttattacaaagggacataaattatcaaatggactatgtttttaagatcatt 38591706  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 19892146 - 19892066
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||||||  ||| ||||||||||||| ||| ||| ||  |||||||| |||| |||||||    
T  19892146 gactatgatcttaaaagtactctttattctgaagggacatatattatcgaatggactat-gttttaagaccattcttaattc 19892066  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 19542191 - 19542223
Alignment:
Q  33 atcttaaaaatactctttattccaaagagacat 65  Q
    ||||||||||||||||||||||| |||||||||    
T  19542191 atcttaaaaatactctttattccgaagagacat 19542223  T

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Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 37248477 - 37248396
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||||||  ||| ||||||||||||| ||  ||| || |||||||||||||| |||||||    
T  37248477 gactatgatcttaaaagtactctttattctgaagggacatatattatcgaagggactatgtttttaagatcattcttaattc 37248396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 9726428 - 9726381
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatc 73  Q
    |||| ||||||||||| ||||||||||||| ||| |||||||||||||    
T  9726428 gactatgatcttaaaagtactctttattccgaagggacatatattatc 9726381  T

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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 26667695 - 26667745
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaa 76  Q
    |||| ||||||||||| ||||||||||||  ||| ||||||||||||||||    
T  26667695 gactatgatcttaaaagtactctttattctgaagggacatatattatcaaa 26667745  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 26939292 - 26939342
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaa 76  Q
    |||| ||||||||||| ||||||||||||  ||| ||||||||||||||||    
T  26939292 gactatgatcttaaaagtactctttattctgaagggacatatattatcaaa 26939342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 36429137 - 36429179
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattatc 73  Q
    ||||||||||||||||||||||||  ||| |||||||||||||    
T  36429137 tgatcttaaaaatactctttattctgaagggacatatattatc 36429179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 13290982 - 13290950
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaa 58  Q
    |||||||||||||||||||||||||||| ||||    
T  13290982 gactttgatcttaaaaatactctttatttcaaa 13290950  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 19540855 - 19540774
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||||||||| ||  ||| || ||||||||| |||| |||||||    
T  19540855 gactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatgtttttaagaccattcttaattc 19540774  T

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Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 12823560 - 12823484
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    ||||||||| ||||||||||||||| ||  ||| ||||||||| ||| ||| || ||||||||| ||||||||||||    
T  12823560 tgatcttaataatactctttattccgaaaggacttatattatcgaatggactatgtttttaagaccatttttaattc 12823484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 19107036 - 19107078
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattatc 73  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  19107036 tgatcttaaaagtactctttattccgaagagacatatattatc 19107078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 8694135 - 8694215
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| |||||||||||| |||| ||||||||||||| ||| ||| ||  |||||||| |||| |||||||    
T  8694135 gactatgatcttaaaagtactctttattctaaagggacatatattatcgaatggactat-gttttaagaccattcttaattc 8694215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 16421460 - 16421541
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||| | ||||||||||||||||| ||| ||||||||| ||  ||| || ||||||||| |||| |||||||    
T  16421460 gactatgatcttaatagtactctttattccaaagggacttatattatcgaagggactatgtttttaagaccattcttaattc 16421541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 6943202 - 6943283
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| |||||||||||||||| |||||||| ||  ||||||||||||| ||  ||| || ||||||||| | || |||||||    
T  6943202 gactatgatcttaaaaatactatttattccgaatggacatatattatcgaagagactatttttttaagacctttcttaattc 6943283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 32081801 - 32081720
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||| | ||||||||||||| ||| ||| ||||||||| ||  ||| || ||||||||| |||| |||||||    
T  32081801 gactatgatcttaatagtactctttattccgaagggacttatattatcgaagggactatgtttttaagaccattcttaattc 32081720  T

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Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 27104172 - 27104128
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatatt 70  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  27104172 gactttgatcttaaaaataatctttattacaaagagacatatatt 27104128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 2207416 - 2207375
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattat 72  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  2207416 tgatcttaaaagtactctttattccgaagagacatatattat 2207375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 46964435 - 46964511
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    ||||||||||| ||||||||||||  ||| ||||||||||||| ||  ||| || ||||||||| |||| |||||||    
T  46964435 tgatcttaaaagtactctttattctgaagggacatatattatcgaagagactatgtttttaagaccattcttaattc 46964511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 758041 - 757960
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||| ||  ||| ||||||||||||| ||  ||| || ||||||||| |||| |||||||    
T  758041 gactatgatcttaaaagtactctttaatctgaagggacatatattatcgaagggactatgtttttaagaccattcttaattc 757960  T

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Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 18472435 - 18472475
Alignment:
Q  33 atcttaaaaatactctttattccaaagagacatatattatc 73  Q
    ||||||||| |||||||||||| |||| |||||||||||||    
T  18472435 atcttaaaagtactctttattctaaagggacatatattatc 18472475  T

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Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 47450901 - 47450821
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaatt 106  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||||||||| ||  ||| || ||||||||| |||| ||||||    
T  47450901 gactatgatcttaaaagtactctttattccgaagggacatatattatcgaagagactatgtttttaagaccattcttaatt 47450821  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 33300921 - 33300853
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaaga 94  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||||||||| ||  ||| || |||||||||    
T  33300921 gactatgatcttaaaagtactctttattccgaagggacatatattatcgaagggactatgtttttaaga 33300853  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 16649309 - 16649262
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatc 73  Q
    |||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  16649309 gactatgatcttaaaaatactctttattctgaagggacatatattatc 16649262  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 26927394 - 26927347
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatc 73  Q
    |||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  26927394 gactatgatcttaaaaatactctttattctgaagggacatatattatc 26927347  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 28434304 - 28434229
Alignment:
Q  31 tgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaatt 106  Q
    |||||||| ||||| |||||||| | ||||||||||||||||| ||| ||| ||  |||||||| |||| ||||||    
T  28434304 tgatcttacaaatattctttatttcgaagagacatatattatcgaatggactatgcttttaagaccattcttaatt 28434229  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 38621126 - 38621207
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||| | || |||||||||| ||| ||| ||||||||||||  ||| || ||||||||| |||| |||||||    
T  38621126 gactatgatcttaatagtaatctttattccgaagggacttatattatcaaagggactatgtttttaagagcattattaattc 38621207  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 39588042 - 39587962
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaatt 106  Q
    |||| ||||||||||| || |||||||||| | | ||||||||||||| ||  |||  | ||||||||| |||||||||||    
T  39588042 gactatgatcttaaaagtattctttattccgatgggacatatattatcgaagggactgtgtttttaagaccatttttaatt 39587962  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 15951227 - 15951146
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| ||||||||||| ||||||||||||  ||| ||||||||||||||||  ||| || |||| |||| |||| |||||||    
T  15951227 gactatgatcttaaaagtactctttattctgaagggacatatattatcaaagggactatgttttaaagaccattcttaattc 15951146  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 7002071 - 7002121
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaa 76  Q
    |||| |||||||||||||| | |||||||||||| |||||| |||||||||    
T  7002071 gactatgatcttaaaaatattttttattccaaagggacataaattatcaaa 7002121  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 38181919 - 38181838
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaattc 107  Q
    |||| |||||||||   ||||||||||||| ||| ||| ||||||||| ||  ||| || ||||||||| ||||||||||||    
T  38181919 gactatgatcttaatggtactctttattccgaagggacttatattatcgaagagactatgtttttaagaccatttttaattc 38181838  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 1910631 - 1910551
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaatt 106  Q
    |||| ||||||||| | ||||||||||| | ||| ||| ||||||||| ||| ||| || ||||||||| |||| ||||||    
T  1910631 gactatgatcttaatagtactctttatttcgaagggacttatattatcgaatggactatgtttttaagaccattcttaatt 1910551  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 14035851 - 14035891
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacata 66  Q
    |||| ||||||||||||||||||||||| | ||||||||||    
T  14035851 gactatgatcttaaaaatactctttatttcgaagagacata 14035891  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 18876064 - 18875984
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatcaaattgaccatatttttaagatcatttttaatt 106  Q
    |||| ||||||||| | ||||||||||||| ||| ||| |||||||||  | |||| || ||||||||| |||| ||||||    
T  18876064 gactatgatcttaatattactctttattccgaagggacttatattatcggagtgactatgtttttaagaccattcttaatt 18875984  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 7527 - 7574
Alignment:
Q  26 gactttgatcttaaaaatactctttattccaaagagacatatattatc 73  Q
    |||| ||||||||||| ||||||||||||  |||||||||||||||||    
T  7527 gactatgatcttaaaagtactctttattctgaagagacatatattatc 7574  T

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