View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2562_high_4 (Length: 616)

Name: NF2562_high_4
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2562_high_4
NF2562_high_4
[»] chr5 (58 HSPs)
chr5 (26-226)||(21322918-21323113)
chr5 (64-226)||(13300405-13300562)
chr5 (29-226)||(31732563-31732760)
chr5 (449-610)||(31732126-31732294)
chr5 (449-610)||(36936848-36937016)
chr5 (449-610)||(36941602-36941770)
chr5 (28-224)||(24435063-24435252)
chr5 (449-610)||(41997253-41997421)
chr5 (449-610)||(42002022-42002190)
chr5 (449-610)||(13300826-13300995)
chr5 (449-610)||(557285-557452)
chr5 (449-610)||(562057-562224)
chr5 (449-610)||(32460881-32461049)
chr5 (464-610)||(21323328-21323481)
chr5 (452-588)||(23976926-23977070)
chr5 (27-222)||(562494-562679)
chr5 (27-222)||(557722-557909)
chr5 (27-222)||(36941145-36941332)
chr5 (46-226)||(2451970-2452149)
chr5 (462-610)||(36949374-36949529)
chr5 (449-610)||(12044466-12044640)
chr5 (27-226)||(41997664-41997856)
chr5 (29-226)||(12044014-12044204)
chr5 (464-575)||(3666537-3666655)
chr5 (27-143)||(36949783-36949899)
chr5 (27-226)||(42002455-42002647)
chr5 (29-226)||(3666896-3667083)
chr5 (29-226)||(32460427-32460617)
chr5 (81-226)||(23976372-23976512)
chr5 (459-603)||(8770839-8770991)
chr5 (29-222)||(36936393-36936578)
chr5 (517-610)||(10754039-10754132)
chr5 (490-610)||(21826812-21826939)
chr5 (490-610)||(26869692-26869819)
chr5 (299-362)||(13300634-13300697)
chr5 (29-192)||(8041143-8041297)
chr5 (459-564)||(1429522-1429624)
chr5 (459-570)||(24435530-24435648)
chr5 (159-209)||(15394854-15394904)
chr5 (300-362)||(21323186-21323248)
chr5 (185-225)||(26869356-26869396)
chr5 (185-225)||(41099672-41099712)
chr5 (299-362)||(15394999-15395061)
chr5 (185-224)||(21827352-21827391)
chr5 (299-362)||(31732428-31732491)
chr5 (29-143)||(34707178-34707293)
chr5 (31-113)||(14232586-14232669)
chr5 (517-548)||(15395252-15395283)
chr5 (299-362)||(36936655-36936717)
chr5 (299-362)||(36941409-36941471)
chr5 (563-605)||(36430230-36430272)
chr5 (311-376)||(12044288-12044352)
chr5 (93-126)||(23347857-23347890)
chr5 (561-610)||(26667892-26667941)
chr5 (561-610)||(26939489-26939538)
chr5 (561-610)||(29167405-29167454)
chr5 (561-610)||(41096987-41097036)
chr5 (459-495)||(15058129-15058165)
[»] scaffold0041 (3 HSPs)
scaffold0041 (29-226)||(34605-34797)
scaffold0041 (449-610)||(35041-35209)
scaffold0041 (299-364)||(34869-34934)
[»] chr7 (72 HSPs)
chr7 (29-226)||(27257237-27257429)
chr7 (26-225)||(40864278-40864474)
chr7 (449-610)||(27256826-27256994)
chr7 (449-610)||(40864700-40864868)
chr7 (449-610)||(9650297-9650466)
chr7 (452-605)||(8076644-8076805)
chr7 (449-610)||(47102128-47102287)
chr7 (26-114)||(40863957-40864045)
chr7 (456-610)||(19640888-19641049)
chr7 (29-226)||(9649844-9650033)
chr7 (459-605)||(14927983-14928136)
chr7 (459-605)||(15351449-15351602)
chr7 (473-610)||(18426516-18426660)
chr7 (459-610)||(16459728-16459886)
chr7 (59-219)||(23866754-23866902)
chr7 (473-610)||(20488537-20488681)
chr7 (473-610)||(45169292-45169436)
chr7 (490-610)||(845986-846113)
chr7 (490-610)||(853363-853490)
chr7 (490-610)||(1211367-1211494)
chr7 (26-134)||(13343308-13343417)
chr7 (464-567)||(9008789-9008899)
chr7 (454-549)||(11247741-11247841)
chr7 (517-605)||(29727216-29727304)
chr7 (29-226)||(47102555-47102742)
chr7 (527-610)||(20485176-20485259)
chr7 (452-545)||(1043873-1043973)
chr7 (452-509)||(7838780-7838837)
chr7 (299-364)||(27257101-27257166)
chr7 (62-226)||(19641312-19641470)
chr7 (299-361)||(40864547-40864609)
chr7 (25-126)||(40997723-40997825)
chr7 (461-542)||(48060558-48060640)
chr7 (491-610)||(8954646-8954772)
chr7 (464-516)||(11297443-11297495)
chr7 (527-610)||(14259595-14259678)
chr7 (83-149)||(10499066-10499132)
chr7 (83-149)||(10504095-10504161)
chr7 (459-509)||(10532157-10532207)
chr7 (459-509)||(13343753-13343803)
chr7 (62-153)||(18330307-18330400)
chr7 (459-509)||(47552626-47552676)
chr7 (490-610)||(838810-838937)
chr7 (490-610)||(1203990-1204117)
chr7 (59-123)||(1044367-1044431)
chr7 (185-225)||(8954304-8954344)
chr7 (29-93)||(11016794-11016858)
chr7 (459-610)||(16580818-16580976)
chr7 (185-225)||(19097401-19097441)
chr7 (452-514)||(10488637-10488700)
chr7 (517-610)||(19096843-19096937)
chr7 (84-153)||(11017018-11017094)
chr7 (452-513)||(15565607-15565668)
chr7 (452-513)||(44784040-44784100)
chr7 (185-225)||(838398-838438)
chr7 (185-225)||(845554-845594)
chr7 (185-225)||(852935-852975)
chr7 (158-226)||(1044241-1044304)
chr7 (185-225)||(1203578-1203618)
chr7 (185-225)||(1210939-1210979)
chr7 (26-149)||(13346244-13346368)
chr7 (459-610)||(32302428-32302586)
chr7 (517-599)||(36477577-36477652)
chr7 (62-125)||(18324392-18324455)
chr7 (459-496)||(10499444-10499481)
chr7 (459-496)||(10504473-10504510)
chr7 (561-610)||(26341821-26341870)
chr7 (517-565)||(2629290-2629338)
chr7 (190-226)||(9009155-9009191)
chr7 (85-121)||(11060271-11060307)
chr7 (517-549)||(11265752-11265784)
chr7 (151-183)||(40997829-40997861)
[»] scaffold0060 (6 HSPs)
scaffold0060 (27-226)||(51794-51988)
scaffold0060 (29-226)||(46857-47045)
scaffold0060 (449-610)||(47310-47478)
scaffold0060 (449-610)||(52254-52422)
scaffold0060 (299-362)||(52062-52125)
scaffold0060 (299-362)||(47118-47181)
[»] chr4 (48 HSPs)
chr4 (29-226)||(3992653-3992845)
chr4 (27-226)||(34561425-34561619)
chr4 (449-602)||(7902448-7902608)
chr4 (449-610)||(34561013-34561181)
chr4 (42-226)||(41817807-41817982)
chr4 (449-610)||(13521322-13521491)
chr4 (449-610)||(3997402-3997567)
chr4 (27-153)||(7899836-7899961)
chr4 (449-575)||(31297831-31297965)
chr4 (449-610)||(47575251-47575419)
chr4 (459-605)||(8660750-8660903)
chr4 (449-610)||(41817371-41817552)
chr4 (29-226)||(13520869-13521058)
chr4 (490-610)||(15225754-15225881)
chr4 (30-220)||(31297409-31297593)
chr4 (459-610)||(15011163-15011321)
chr4 (473-610)||(10713529-10713673)
chr4 (473-610)||(10927299-10927443)
chr4 (473-610)||(12488387-12488531)
chr4 (517-610)||(14868480-14868573)
chr4 (517-610)||(14877361-14877454)
chr4 (517-610)||(14953467-14953560)
chr4 (26-226)||(39320586-39320771)
chr4 (522-610)||(25690583-25690671)
chr4 (490-610)||(9185062-9185189)
chr4 (517-610)||(14899028-14899121)
chr4 (452-543)||(1150700-1150797)
chr4 (299-362)||(3997210-3997273)
chr4 (299-362)||(7902256-7902319)
chr4 (490-610)||(9190927-9191054)
chr4 (299-364)||(34561288-34561353)
chr4 (299-376)||(41817659-41817736)
chr4 (169-226)||(7902121-7902184)
chr4 (452-565)||(52742564-52742684)
chr4 (59-123)||(36209151-36209215)
chr4 (544-610)||(18023210-18023276)
chr4 (490-551)||(26034836-26034904)
chr4 (85-126)||(15541602-15541643)
chr4 (185-222)||(26035206-26035243)
chr4 (29-122)||(55074432-55074525)
chr4 (190-225)||(14891262-14891297)
chr4 (459-498)||(43477340-43477379)
chr4 (185-223)||(9184749-9184787)
chr4 (185-223)||(9190588-9190626)
chr4 (299-361)||(31297663-31297724)
chr4 (517-610)||(39320151-39320244)
chr4 (461-509)||(26187991-26188039)
chr4 (521-549)||(32545533-32545561)
[»] chr2 (42 HSPs)
chr2 (29-223)||(6296796-6296985)
chr2 (449-610)||(10160056-10160225)
chr2 (29-184)||(28856146-28856297)
chr2 (452-610)||(28855720-28855884)
chr2 (449-610)||(6297230-6297397)
chr2 (28-226)||(10159600-10159789)
chr2 (460-610)||(25375478-25375635)
chr2 (459-610)||(22844991-22845149)
chr2 (449-610)||(30658766-30658928)
chr2 (91-225)||(22845388-22845518)
chr2 (459-610)||(23068100-23068258)
chr2 (473-610)||(1284103-1284247)
chr2 (459-610)||(7559697-7559856)
chr2 (490-610)||(24292840-24292967)
chr2 (517-610)||(30344328-30344421)
chr2 (490-610)||(34070008-34070135)
chr2 (456-516)||(30641455-30641515)
chr2 (517-610)||(24286306-24286399)
chr2 (452-571)||(30640334-30640460)
chr2 (459-567)||(17452933-17453053)
chr2 (43-113)||(17329272-17329342)
chr2 (109-226)||(30659166-30659271)
chr2 (490-610)||(6856786-6856913)
chr2 (490-598)||(26897228-26897343)
chr2 (91-183)||(30637204-30637293)
chr2 (27-121)||(30659274-30659370)
chr2 (525-610)||(42248816-42248901)
chr2 (517-610)||(377702-377795)
chr2 (459-598)||(9785751-9785895)
chr2 (91-132)||(30635872-30635913)
chr2 (185-225)||(24285826-24285866)
chr2 (185-225)||(24292503-24292543)
chr2 (92-183)||(35602657-35602745)
chr2 (160-223)||(25375909-25375971)
chr2 (299-362)||(6297059-6297122)
chr2 (152-183)||(19588688-19588719)
chr2 (311-362)||(28856017-28856067)
chr2 (186-225)||(42249350-42249389)
chr2 (517-551)||(17327708-17327742)
chr2 (517-599)||(30635393-30635478)
chr2 (561-610)||(18345025-18345074)
chr2 (185-225)||(26903229-26903269)
[»] scaffold0070 (6 HSPs)
scaffold0070 (27-223)||(59429-59619)
scaffold0070 (27-223)||(63631-63821)
scaffold0070 (449-610)||(59015-59183)
scaffold0070 (449-543)||(63284-63385)
scaffold0070 (299-362)||(59291-59354)
scaffold0070 (299-362)||(63493-63556)
[»] chr8 (46 HSPs)
chr8 (27-226)||(8330260-8330454)
chr8 (29-226)||(37772728-37772928)
chr8 (449-610)||(8330700-8330868)
chr8 (47-226)||(25361624-25361797)
chr8 (449-610)||(4237678-4237846)
chr8 (449-610)||(4242417-4242585)
chr8 (449-610)||(31449202-31449370)
chr8 (451-610)||(43302023-43302189)
chr8 (449-610)||(25367323-25367491)
chr8 (449-610)||(37772296-37772463)
chr8 (449-610)||(34818043-34818211)
chr8 (29-226)||(34817620-34817815)
chr8 (27-150)||(21959473-21959596)
chr8 (29-223)||(31448747-31448934)
chr8 (27-222)||(4241961-4242148)
chr8 (29-222)||(4237224-4237409)
chr8 (29-226)||(43301626-43301816)
chr8 (473-610)||(21384333-21384477)
chr8 (473-610)||(21387753-21387897)
chr8 (490-610)||(4582674-4582801)
chr8 (517-610)||(18861982-18862075)
chr8 (452-516)||(10933930-10933994)
chr8 (456-516)||(17153228-17153288)
chr8 (527-610)||(21827361-21827444)
chr8 (530-610)||(23915081-23915161)
chr8 (490-610)||(19393109-19393236)
chr8 (473-605)||(21411617-21411756)
chr8 (473-605)||(21806109-21806248)
chr8 (490-602)||(22104272-22104391)
chr8 (299-364)||(25367152-25367217)
chr8 (456-516)||(17157396-17157456)
chr8 (86-222)||(42973118-42973247)
chr8 (452-509)||(14036186-14036243)
chr8 (530-599)||(25733590-25733659)
chr8 (185-225)||(4582334-4582374)
chr8 (299-362)||(8330530-8330593)
chr8 (517-590)||(16066629-16066702)
chr8 (519-571)||(14036083-14036135)
chr8 (185-225)||(22104824-22104864)
chr8 (26-74)||(25361575-25361623)
chr8 (299-362)||(4237485-4237547)
chr8 (299-362)||(4242224-4242286)
chr8 (299-362)||(37772592-37772655)
chr8 (459-498)||(42972847-42972886)
chr8 (311-374)||(43301886-43301948)
chr8 (314-362)||(4582440-4582487)
[»] chr6 (35 HSPs)
chr6 (29-225)||(6111615-6111807)
chr6 (449-610)||(6112096-6112264)
chr6 (520-600)||(24588593-24588673)
chr6 (490-610)||(16625005-16625132)
chr6 (452-571)||(2862812-2862938)
chr6 (459-610)||(15704258-15704416)
chr6 (472-610)||(19772372-19772517)
chr6 (473-610)||(31477065-31477209)
chr6 (452-571)||(2882115-2882241)
chr6 (522-610)||(22949821-22949909)
chr6 (522-610)||(22953777-22953865)
chr6 (522-610)||(23872265-23872353)
chr6 (522-610)||(23876221-23876309)
chr6 (452-516)||(28964163-28964227)
chr6 (459-605)||(2077406-2077559)
chr6 (473-610)||(16760971-16761116)
chr6 (88-223)||(2759199-2759327)
chr6 (60-224)||(2881761-2881914)
chr6 (459-610)||(22806940-22807098)
chr6 (60-224)||(2862458-2862611)
chr6 (517-610)||(14073724-14073817)
chr6 (299-362)||(6111906-6111969)
chr6 (473-610)||(27324422-27324564)
chr6 (85-223)||(28963811-28963942)
chr6 (185-225)||(26981701-26981741)
chr6 (185-225)||(27074083-27074123)
chr6 (59-183)||(29157098-29157221)
chr6 (517-610)||(26981184-26981277)
chr6 (490-610)||(27073574-27073701)
chr6 (185-225)||(14074148-14074188)
chr6 (185-225)||(18387921-18387961)
chr6 (563-602)||(17281336-17281375)
chr6 (194-223)||(15645696-15645725)
chr6 (561-610)||(17963991-17964040)
chr6 (517-610)||(18387521-18387614)
[»] chr3 (64 HSPs)
chr3 (29-226)||(10585066-10585263)
chr3 (449-610)||(3034232-3034400)
chr3 (449-610)||(3693207-3693375)
chr3 (449-610)||(8888519-8888687)
chr3 (449-610)||(3673175-3673343)
chr3 (449-610)||(8070268-8070436)
chr3 (449-610)||(8883759-8883927)
chr3 (449-610)||(10585527-10585695)
chr3 (449-610)||(45903882-45904050)
chr3 (28-213)||(631966-632147)
chr3 (27-222)||(8070705-8070890)
chr3 (462-611)||(6595743-6595899)
chr3 (27-222)||(3673592-3673779)
chr3 (28-222)||(3693646-3693832)
chr3 (29-226)||(8888938-8889128)
chr3 (87-226)||(45903518-45903654)
chr3 (27-226)||(8884192-8884384)
chr3 (28-222)||(3034670-3034856)
chr3 (473-610)||(9706952-9707096)
chr3 (473-610)||(16749281-16749425)
chr3 (473-610)||(19776474-19776618)
chr3 (27-96)||(45903237-45903306)
chr3 (452-555)||(12899083-12899193)
chr3 (451-571)||(429057-429184)
chr3 (490-610)||(8223524-8223651)
chr3 (456-540)||(16023191-16023282)
chr3 (527-610)||(18699200-18699283)
chr3 (459-588)||(22758527-22758663)
chr3 (517-610)||(4106738-4106831)
chr3 (517-610)||(4110590-4110683)
chr3 (517-610)||(15965644-15965737)
chr3 (517-610)||(15969568-15969661)
chr3 (517-610)||(15973492-15973585)
chr3 (490-610)||(18350153-18350280)
chr3 (299-362)||(10585335-10585398)
chr3 (490-603)||(8197048-8197168)
chr3 (473-610)||(37438921-37439065)
chr3 (490-610)||(29817-29944)
chr3 (490-602)||(14425221-14425340)
chr3 (473-610)||(8488752-8488895)
chr3 (452-498)||(47540832-47540878)
chr3 (185-225)||(30371-30411)
chr3 (185-225)||(18349686-18349726)
chr3 (299-362)||(631829-631891)
chr3 (59-122)||(35455798-35455861)
chr3 (544-610)||(14671982-14672048)
chr3 (517-567)||(35456351-35456401)
chr3 (452-498)||(47541248-47541294)
chr3 (452-494)||(53502476-53502518)
chr3 (561-610)||(18472620-18472669)
chr3 (517-610)||(51922923-51923016)
chr3 (189-221)||(6595464-6595496)
chr3 (185-225)||(8197593-8197633)
chr3 (185-225)||(8224078-8224118)
chr3 (462-518)||(16055864-16055920)
chr3 (299-362)||(3034531-3034593)
chr3 (299-362)||(3693507-3693569)
chr3 (299-362)||(8888818-8888880)
chr3 (517-548)||(11997418-11997449)
chr3 (186-225)||(51923348-51923387)
chr3 (561-610)||(18467826-18467875)
chr3 (561-610)||(32473456-32473505)
chr3 (561-610)||(39775160-39775209)
chr3 (462-518)||(16043189-16043245)
[»] chr1 (48 HSPs)
chr1 (449-610)||(41097295-41097463)
chr1 (28-225)||(33055800-33055992)
chr1 (79-226)||(40232322-40232465)
chr1 (455-610)||(40232731-40232893)
chr1 (449-610)||(3094678-3094846)
chr1 (29-226)||(41096835-41097031)
chr1 (455-610)||(17213787-17213949)
chr1 (459-610)||(16836641-16836791)
chr1 (460-605)||(13893910-13894062)
chr1 (26-225)||(13894268-13894465)
chr1 (28-222)||(3095115-3095301)
chr1 (449-545)||(8267189-8267292)
chr1 (459-610)||(1067070-1067228)
chr1 (459-610)||(19725253-19725409)
chr1 (473-610)||(39243384-39243528)
chr1 (473-610)||(39246939-39247083)
chr1 (518-610)||(26198947-26199039)
chr1 (517-610)||(1924466-1924559)
chr1 (490-610)||(14804093-14804220)
chr1 (517-610)||(20923480-20923573)
chr1 (163-225)||(19724937-19724999)
chr1 (452-549)||(27308228-27308332)
chr1 (473-610)||(41387336-41387480)
chr1 (490-598)||(21498252-21498367)
chr1 (491-610)||(22428575-22428700)
chr1 (299-362)||(41097103-41097166)
chr1 (490-610)||(14819561-14819688)
chr1 (526-610)||(2367632-2367716)
chr1 (526-610)||(2384667-2384751)
chr1 (62-125)||(14204483-14204546)
chr1 (164-222)||(1067441-1067499)
chr1 (517-610)||(33055625-33055718)
chr1 (490-610)||(52100600-52100726)
chr1 (185-225)||(14813572-14813612)
chr1 (459-515)||(19727056-19727112)
chr1 (185-225)||(21498793-21498833)
chr1 (185-225)||(52100147-52100187)
chr1 (185-224)||(2368060-2368099)
chr1 (185-224)||(2384283-2384322)
chr1 (152-222)||(17213178-17213242)
chr1 (27-123)||(27307355-27307450)
chr1 (185-225)||(22428235-22428275)
chr1 (451-566)||(23254526-23254648)
chr1 (299-362)||(3094977-3095039)
chr1 (83-149)||(17213084-17213151)
chr1 (88-183)||(23254149-23254243)
chr1 (561-610)||(26927153-26927202)
chr1 (193-221)||(8273196-8273224)
[»] scaffold0061 (3 HSPs)
scaffold0061 (27-226)||(48840-49036)
scaffold0061 (449-610)||(49321-49489)
scaffold0061 (299-362)||(49108-49171)
[»] scaffold0017 (3 HSPs)
scaffold0017 (27-226)||(149598-149794)
scaffold0017 (449-610)||(149145-149313)
scaffold0017 (299-362)||(149463-149526)
[»] scaffold0484 (2 HSPs)
scaffold0484 (47-226)||(7933-8106)
scaffold0484 (26-74)||(8107-8155)
[»] scaffold0182 (3 HSPs)
scaffold0182 (449-610)||(9217-9386)
scaffold0182 (29-226)||(8764-8954)
scaffold0182 (299-362)||(9024-9087)
[»] scaffold0020 (4 HSPs)
scaffold0020 (449-610)||(577-745)
scaffold0020 (172-226)||(281-334)
scaffold0020 (305-362)||(412-469)
scaffold0020 (333-376)||(462-505)
[»] scaffold0015 (4 HSPs)
scaffold0015 (27-150)||(213252-213375)
scaffold0015 (490-610)||(193645-193772)
scaffold0015 (185-225)||(192658-192698)
scaffold0015 (517-610)||(187993-188086)
[»] scaffold0045 (1 HSPs)
scaffold0045 (81-221)||(83929-84066)
[»] scaffold0034 (1 HSPs)
scaffold0034 (459-610)||(121155-121313)
[»] scaffold0628 (3 HSPs)
scaffold0628 (459-610)||(6977-7135)
scaffold0628 (27-223)||(7457-7647)
scaffold0628 (27-126)||(5779-5879)
[»] scaffold0572 (1 HSPs)
scaffold0572 (473-610)||(10337-10481)
[»] scaffold0019 (1 HSPs)
scaffold0019 (490-610)||(30273-30400)
[»] scaffold0011 (1 HSPs)
scaffold0011 (459-610)||(126992-127150)
[»] scaffold0229 (1 HSPs)
scaffold0229 (473-610)||(10787-10931)
[»] scaffold0157 (1 HSPs)
scaffold0157 (473-610)||(31946-32090)
[»] scaffold0144 (1 HSPs)
scaffold0144 (473-598)||(7478-7610)
[»] scaffold0141 (1 HSPs)
scaffold0141 (473-610)||(13373-13517)
[»] scaffold0124 (1 HSPs)
scaffold0124 (473-610)||(21347-21491)
[»] scaffold0205 (1 HSPs)
scaffold0205 (517-610)||(30856-30949)
[»] scaffold0575 (2 HSPs)
scaffold0575 (459-610)||(5228-5386)
scaffold0575 (459-518)||(2120-2179)
[»] scaffold0478 (2 HSPs)
scaffold0478 (456-516)||(8277-8337)
scaffold0478 (456-516)||(2899-2959)
[»] scaffold0018 (1 HSPs)
scaffold0018 (459-610)||(21896-22054)
[»] scaffold0431 (1 HSPs)
scaffold0431 (473-610)||(14838-14982)
[»] scaffold0415 (1 HSPs)
scaffold0415 (517-610)||(1077-1170)
[»] scaffold0357 (3 HSPs)
scaffold0357 (517-610)||(3759-3852)
scaffold0357 (185-225)||(3386-3426)
scaffold0357 (185-225)||(12975-13015)
[»] scaffold0132 (2 HSPs)
scaffold0132 (490-610)||(24674-24801)
scaffold0132 (185-225)||(24333-24373)
[»] scaffold0009 (1 HSPs)
scaffold0009 (492-599)||(71731-71846)
[»] scaffold0720 (1 HSPs)
scaffold0720 (456-516)||(5895-5955)
[»] scaffold0044 (4 HSPs)
scaffold0044 (492-610)||(81147-81272)
scaffold0044 (492-610)||(64749-64874)
scaffold0044 (185-225)||(65433-65473)
scaffold0044 (185-225)||(81681-81721)
[»] scaffold0031 (1 HSPs)
scaffold0031 (527-610)||(35433-35516)
[»] scaffold0327 (2 HSPs)
scaffold0327 (517-610)||(19634-19727)
scaffold0327 (185-225)||(8639-8679)
[»] scaffold0452 (1 HSPs)
scaffold0452 (527-610)||(12390-12473)
[»] scaffold1910 (2 HSPs)
scaffold1910 (517-610)||(455-548)
scaffold1910 (185-225)||(858-898)
[»] scaffold0008 (1 HSPs)
scaffold0008 (42-221)||(257663-257834)
[»] scaffold0292 (1 HSPs)
scaffold0292 (527-610)||(7756-7839)
[»] scaffold0131 (2 HSPs)
scaffold0131 (452-514)||(8372-8434)
scaffold0131 (85-143)||(8648-8706)
[»] scaffold0777 (1 HSPs)
scaffold0777 (461-516)||(3811-3866)
[»] scaffold0155 (2 HSPs)
scaffold0155 (185-222)||(22539-22576)
scaffold0155 (537-610)||(22264-22337)
[»] scaffold0863 (1 HSPs)
scaffold0863 (185-225)||(267-307)
[»] scaffold0096 (1 HSPs)
scaffold0096 (536-610)||(22298-22372)
[»] scaffold0004 (1 HSPs)
scaffold0004 (187-225)||(200203-200241)
[»] scaffold0232 (1 HSPs)
scaffold0232 (561-610)||(11783-11832)


Alignment Details
Target: chr5 (Bit Score: 161; Significance: 1e-85; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 21322918 - 21323113
Alignment:
Q  26 tattgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 125  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21322918 tattgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 21323017  T
Q  126 cgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    | ||||||| |||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21323018 catcggatggatcacacatta-----gtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactaga 21323112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 13300405 - 13300562
Alignment:
Q  64 aacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttata 163  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||     ||||||||    
T  13300405 aacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacatcagatggatcacacattagtag-----tgtttata 13300499  T
Q  164 tagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13300500 tagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 13300562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 29 - 226
Target Start/End: Complemental strand, 31732760 - 31732563
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgt 128  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||| |    
T  31732760 tgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatggatagaactagtgtagtgtgaattgaaaaaaatggaagtcccacat 31732661  T
Q  129 cggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtac------ataattatgtgaacgaagtaagcact 222  Q
    | |||| |||||||||||     |||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||    
T  31732660 c-gatggatcacacatta-----gtagtgtttatatagtgggggtgtacctctaattaatgggggtacataactataattatgtgaacgaagtaagcact 31732567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 31732294 - 31732126
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  31732294 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 31732195  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||||| || ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  31732194 agctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 31732126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 36936848 - 36937016
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  36936848 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 36936947  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  36936948 agctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 36937016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 36941602 - 36941770
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  36941602 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 36941701  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||| ||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  36941702 agctcacacagtgcattccatacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 36941770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 28 - 224
Target Start/End: Original strand, 24435063 - 24435252
Alignment:
Q  28 ttgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacg 127  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||     
T  24435063 ttgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaa--ggaagtctcact 24435160  T
Q  128 tcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactag 224  Q
    ||| ||| |||||||||||     |||||||||||||| ||||| ||||||| || ||||| ||||||||| |||| ||||||||||||||||||||    
T  24435161 tcgaatggatcacacatta-----gtagtgtttatataatggggttgtacctgtatttaataggggtacatgattaagtgaacgaagtaagcactag 24435252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 41997421 - 41997253
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  41997421 gagactcaatttgagatatttttgtattagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 41997322  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||| ||||| ||||    
T  41997321 agctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 41997253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 42002190 - 42002022
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  42002190 gagactcaatttgagatatttttgtattagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 42002091  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||| ||||| ||||    
T  42002090 agctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 42002022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 13300826 - 13300995
Alignment:
Q  449 gagactcaatttgagatattttt-gtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaataga 540  Q
    |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||    
T  13300826 gagacttagtttgagatattttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaataga 13300925  T
Q  541 gagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||| | |||||||||||||| ||||    
T  13300926 gagctcacacagtgctttccacacaccgaaattcacagttgatgcttcatgtgcttttcctctcttctcc 13300995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 557452 - 557285
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||       ||||| |||||||||||||||||    
T  557452 gagactcaatttgagatatttttgtactagatctaatatgagaatcact-gctcccaaagtttctcacttattagttgtgaactttctctataaatagag 557354  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  557353 agctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 557285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 562224 - 562057
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||       ||||| |||||||||||||||||    
T  562224 gagactcaatttgagatatttttgtactagatctaatatgagaatcact-gctcccaaagtttcttacttattagttgtgaactttctctataaatagag 562126  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  562125 agctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 562057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 32460881 - 32461049
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||| ||| |||||||||||||    
T  32460881 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcctaaagtttctcacttattagttgtgaactttatctataaatagag 32460980  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| ||| ||||| ||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  32460981 agctcacacaatgcattccatacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 32461049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 464 - 610
Target Start/End: Original strand, 21323328 - 21323481
Alignment:
Q  464 atatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgct 556  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||       ||||| |||||||||||||||||||||||||||||| |    
T  21323328 atatttttgtactagatataatatgagaattacttgcttccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgtt 21323427  T
Q  557 ttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||| ||||||||||||| |||| ||||||||| | |||||||||||| ||||    
T  21323428 ttccatacaccgaaattcacagttgatgcttcctgtacttttcctctcttctcc 21323481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 23976926 - 23977070
Alignment:
Q  452 actcaatttga-gatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagag 543  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||    
T  23976926 actcaatttgaagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagtagtgaactttctctataaatagagag 23977025  T
Q  544 ctcacacagtgctttccacacaccgaaattcatagttaatgcttc 588  Q
    |||||||||||| ||||| |||| |||||||| |||| |||||||    
T  23977026 ctcacacagtgcattccatacactgaaattcacagttgatgcttc 23977070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 27 - 222
Target Start/End: Complemental strand, 562679 - 562494
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||||||||||||  |||||||||||||  ||  |||||||||||||||| ||   |||||||||||||||| ||||||||||| |||||||||||||||    
T  562679 attgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattga-aaaagtggaagtccc 562581  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    || ||||||| | |||||||||     ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||    
T  562580 acatcggatggaacacacatta-----gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcact 562494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 27 - 222
Target Start/End: Complemental strand, 557909 - 557722
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||||||||||||  |||||||||||||  ||  |||||||||||||||| ||   |||||||||||||||| ||||||||||| |||||||||||||||    
T  557909 attgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattga-aaaagtggaagtccc 557811  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    || ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||    
T  557810 acatcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcact 557722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 36941145 - 36941332
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||||||||||||  |||||||||||||  ||| |||||||||||||||| ||   ||||||||||||||||  ||||||||| ||||||||||||||||    
T  36941145 attgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttctgtgaattg-aaaaagtggaagtccc 36941243  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    || ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||    
T  36941244 acatcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcact 36941332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 46 - 226
Target Start/End: Complemental strand, 2452149 - 2451970
Alignment:
Q  46 aaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaa-aaaagtggaagtcccacgtcggatgaatcacacat 144  Q
    ||||||||||| ||||||||||||||||| || || |||||||| || |||||| ||||||||| ||||||||||||| ||  ||||||| |||||||||    
T  2452149 aaattgagtaattgactaaacacaaattcccataacgggtagaattaatgtagtatgaattgaaaaaaagtggaagtctcatatcggatggatcacacat 2452050  T
Q  145 tagtagtg--tagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    ||||||||  ||   |||||||| ||  ||| ||||||    |||| |||||||||||||||||||||||||||||||||||||    
T  2452049 tagtagtgtttatactttatataatgaaggtatacctc----taataggggtacataattatgtgaacgaagtaagcactagag 2451970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 462 - 610
Target Start/End: Complemental strand, 36949529 - 36949374
Alignment:
Q  462 agatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtg 554  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||       || |||||||| ||||||||||||||||||||||||||    
T  36949529 agatatttttgtactagatctaatatgtgaattacttgttcccaaagtttctcacttattagttatgaattttttctataaatagagagctcacacagtg 36949430  T
Q  555 ctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    | ||| ||||||||||| ||| | || ||| ||||| ||||||  |||||| ||||    
T  36949429 cattcaacacaccgaaaatcacaattgatgtttcctgtgctttagctctcttctcc 36949374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 12044466 - 12044640
Alignment:
Q  449 gagactcaatttgagatattttt-gtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaataga 540  Q
    |||||||||||||| |||||||| ||||||||| ||||||  |||||||||||||||||||||| ||||||       |||||||||||||| ||| |||    
T  12044466 gagactcaatttgaaatattttttgtactagatgtaatatatgaattacttgctcccaaagtttttcacttattagttgtgaattttctctagaaaaaga 12044565  T
Q  541 gagctcacaca-----gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||     |||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  12044566 gagctcacacacagcagtgcattccacacaccgaaattcaaagttgatgcttcctgtgtttttcctctcttctcc 12044640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 41997856 - 41997664
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||||||||||||  ||| |||||||||  ||  |||||||||||||||| ||   |||||||||||||||| |||||||||||||||||||||||||||    
T  41997856 attgttggaacatgtgtgaaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtccc 41997757  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactag 224  Q
    || ||||||| | ||||||  | ||  |||||||||||||| ||||||||||| ||||      || |||||||| |||||||||||||||||||| |||    
T  41997756 acatcggatggaacacaca-catta--gtagtgtttatatattgggggtgtacttcta------ggaggtacatagttatgtgaacgaagtaagcattag 41997666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 12044014 - 12044204
Alignment:
Q  29 tgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||  |||||||||||||  ||  |||||||||||||||| ||   |||||||||||||||| ||||||||||||||||||| ||||||| |    
T  12044014 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtgaaagtccctc 12044113  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
     ||||||| | ||||||  | ||  ||||||||||||||||||||||||| || |||      | |||||||| ||||||||||||||||||||||||||    
T  12044114 atcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtatctttaa------gaggtacatagttatgtgaacgaagtaagcactagag 12044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 464 - 575
Target Start/End: Complemental strand, 3666655 - 3666537
Alignment:
Q  464 atatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgct 556  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||||||||||       |||||||||||||||||||||||||||||| ||| ||     
T  3666655 atatttttgtactagatctaatatgtgaattacttgttctcaaagtttctcacttattagttgtgaattttctctataaatagagagctcacgcagggca 3666556  T
Q  557 ttccacacaccgaaattca 575  Q
    ||| |||||||||||||||    
T  3666555 ttctacacaccgaaattca 3666537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 36949899 - 36949783
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    ||||||| |||||  ||| ||||||||||| | |||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  36949899 attgttgaaacatgtgtgaaaattgagtaattaactaaacacaaattctcataataggcggaactagtgtagtgtgaattgaaaaaagtggaagtcccac 36949800  T
Q  127 gtcggatgaatcacaca 143  Q
     ||||||| ||| ||||    
T  36949799 atcggatggatcccaca 36949783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 42002647 - 42002455
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||||||||||||  |||||||||||||  ||  ||||||||||||||||  |   |||||||||||||||| |||||||||||||||||||||||||||    
T  42002647 attgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcatatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtccc 42002548  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactag 224  Q
    || ||||||| | ||||||  | ||  |||||||||||||| || |||||||| ||||      || |||||||| |||||||||||||||||||| |||    
T  42002547 acatcggatggaacacaca-catta--gtagtgtttatatattgagggtgtacttcta------ggaggtacatagttatgtgaacgaagtaagcattag 42002457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 29 - 226
Target Start/End: Complemental strand, 3667083 - 3666896
Alignment:
Q  29 tgttggaacataagtggaaattgagtaact-gactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacg 127  Q
    |||||||||||  |||||||||||||||   ||||||||||||||| |||   || |||||| |||||| |||| |||||||||| |||||||||||||     
T  3667083 tgttggaacatgtgtggaaattgagtaaaaagactaaacacaaattttcatgttgtgtagaaatagtgttgtgtaaattgaaaaaggtggaagtcccaca 3666984  T
Q  128 tcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    ||||||| | ||  |||||||||||       | |||||||||||||||||||    |||| ||||||||||||||||||||||| |||||||||||||    
T  3666983 tcggatggaacaagcattagtagtg-------tttatagtgggggtgtacctc----taataggggtacataattatgtgaacgatgtaagcactagag 3666896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 32460427 - 32460617
Alignment:
Q  29 tgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||  || ||||||||||  ||  |||||| ||||||||| ||   |||||||||||||||| |||||||||||||||||||||||| ||||    
T  32460427 tgttggaacatgtgttgaaattgagttaaaaagactaatcacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtaccac 32460526  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
     ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||||||| |||||||| |||||||    
T  32460527 atcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaatgaagtaagtactagag 32460617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 81 - 226
Target Start/End: Original strand, 23976372 - 23976512
Alignment:
Q  81 tgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctc 180  Q
    |||||||||  ||||| |||||||||||||||||||||| || |     ||||| |||||||||||||| |||     |||||||||| |||||||||||    
T  23976372 tgggtagaatcagtgttgtgtgaattgaaaaaagtggaaatctcgtactggatggatcacacattagtaatgt-----ttatatagtgagggtgtacctc 23976466  T
Q  181 taattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    ||||||||||||||| |||||||||| |||||||||||||| ||||    
T  23976467 taattaatgggggtatataattatgttaacgaagtaagcaccagag 23976512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 459 - 603
Target Start/End: Complemental strand, 8770991 - 8770839
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctc--------acttgtgaattttctctataaatagagagctcacac 550  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||  ||||||||||        | ||||||||||||||||||||||||||||||||||    
T  8770991 ttgaaatatttttgtactagatctgatatgtgaattacttgctcgtaaagtttctctttttattagttgtgaattttctctataaatagagagctcacac 8770892  T
Q  551 agtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctct 603  Q
    | ||| |||   |||| |||||||| |||| ||||||||| || |||||||||    
T  8770891 aatgcattctggacactgaaattcacagttgatgcttcctgtgtttttcctct 8770839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 36936393 - 36936578
Alignment:
Q  29 tgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||  |||||||||||||  ||| |||||||||||||||| ||   |||||||||||||||| |||||||||| ||| |||||||||| |||    
T  36936393 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattg-aaacagtggaagtctcac 36936491  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
     ||| ||| | ||||||  | ||  |||||||||||||||| |||||||||||||||      | |||||||| ||||||||||||||||||||||    
T  36936492 atcgaatggaacacaca-catta--gtagtgtttatatagtaggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcact 36936578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 10754132 - 10754039
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  10754132 ttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 10754039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 21826939 - 21826812
Alignment:
Q  490 gaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| |||||||||||||||| |       ||||| ||||||||||||||||||||||||||| ||| ||| |||| |||||||||| |||| |    
T  21826939 gaattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctacaccccgaaattcacagttga 21826840  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    || ||||| |||||||||||||| ||||    
T  21826839 tgattcctgtgcttttcctctcttctcc 21826812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 26869692 - 26869819
Alignment:
Q  490 gaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| |||||||||||||||| |       ||||| ||||||||||||||||||||||||||| ||| |||   ||||||||||||| |||| |    
T  26869692 gaattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttga 26869791  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| |||||||||||||| ||||    
T  26869792 tgcttcctgtgcttttcctctcttctcc 26869819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 13300634 - 13300697
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  13300634 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 13300697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 8041143 - 8041297
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgt 128  Q
    |||||||| ||  ||||||||||||||| |||||||| ||||| |  || | |||||| ||||||| ||||||||||||  |||| |||||||||||| |    
T  8041143 tgttggaagatgtgtggaaattgagtaattgactaaatacaaaattccatagtgggtacaactagtatagtgtgaattg--aaaattggaagtcccacat 8041240  T
Q  129 cggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggg 192  Q
    |||||| ||| ||||         |||||||||||||||||||| |||||||| ||||| ||||    
T  8041241 cggatggatctcaca-------catagtgtttatatagtgggggcgtacctcttattaacgggg 8041297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 564
Target Start/End: Original strand, 1429522 - 1429624
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttgtgaa--ttttctctataaatagagagctcacacagtgct 556  Q
    ||||||||||||||||| |||||||| ||| | |||||||| |||||||||||     |||||||  |||| ||||||||||||||||||||| |||||     
T  1429522 ttgagatatttttgtaccagatctaacatgtgtattacttgttcccaaagttt-----ttgtgaattttttttctataaatagagagctcacatagtgca 1429616  T
Q  557 ttccacac 564  Q
    ||| ||||    
T  1429617 ttctacac 1429624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 570
Target Start/End: Original strand, 24435530 - 24435648
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||||||||||||||||||||  || ||||||| ||| ||||| | ||||||       | ||| |||||||||||||||||||||| ||||    
T  24435530 ttgagatatttttgtactagatctaatatatgagttacttgttcctaaagtctttcacttattagtagagaactttctctataaatagagagctctcaca 24435629  T
Q  552 gtgctttccacacaccgaa 570  Q
    |||| |||  |||||||||    
T  24435630 gtgcattcttcacaccgaa 24435648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 15394854 - 15394904
Alignment:
Q  159 ttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaa 209  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  15394854 ttatatagtgggggtgtacctttaattaatgagggtgcataattatgtgaa 15394904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 21323186 - 21323248
Alignment:
Q  300 aaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||  | ||||||||||||||    
T  21323186 aaagtgttttcttagtccccaaattttgctaaaaatattttggaacgcaatctagaatatttt 21323248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 26869356 - 26869396
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  26869356 taatgggggtacataattgtgtgaacgaagtaagcactaga 26869396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 41099712 - 41099672
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  41099712 taatgggggtacataattgtgtgaacgaagtaagcactaga 41099672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 15394999 - 15395061
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| |||||||||| ||| || ||||||||||||||    
T  15394999 gaaagtgttttcttagtccccaagttttgct-aaaatattttagaacacaatctagaatatttt 15395061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 21827391 - 21827352
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactag 224  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  21827391 taatgggggtacataattgtgtgaacgaagtaagcactag 21827352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 31732491 - 31732428
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| |||||  |||||||||||||||||||||||||||||||||  | ||||| ||||||||    
T  31732491 gaaagtgttttcctagtccccaagttttgctaaaaatattttggaacgcaatctacaatatttt 31732428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 34707178 - 34707293
Alignment:
Q  29 tgttggaacataagtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacg 127  Q
    |||| ||||||| ||| ||||||||| ||  |||||||||||||||||  || |  |||||| || ||| ||||||||| |||||| ||||||||| ||     
T  34707178 tgtttgaacatatgtgaaaattgagttaaaagactaaacacaaattctttcattcagtagaaataatgttgtgtgaattaaaaaaattggaagtcctaca 34707277  T
Q  128 tcggatgaatcacaca 143  Q
    | ||||||||||||||    
T  34707278 ttggatgaatcacaca 34707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 14232586 - 14232669
Alignment:
Q  31 ttggaacataagtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaa 113  Q
    |||||||| | ||||||||||||| ||   ||||||||||||||  |||| ||||||| |||||| | ||||||||||||||||    
T  14232586 ttggaacaaatgtggaaattgagttaaaaaactaaacacaaatttccacattgggtagcactagtattgtgtgaattgaaaaaa 14232669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 548
Target Start/End: Original strand, 15395252 - 15395283
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcac 548  Q
    ||||||||||||||||||||||||||||||||    
T  15395252 ttgtgaattttctctataaatagagagctcac 15395283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 36936655 - 36936717
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||||||  | ||||||||||||||    
T  36936655 gaaagtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatatttt 36936717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 36941409 - 36941471
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||||||  | ||||||||||||||    
T  36941409 gaaagtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatatttt 36941471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 605
Target Start/End: Complemental strand, 36430272 - 36430230
Alignment:
Q  563 acaccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    |||||||||||||||||| ||||||||| || |||||||||||    
T  36430272 acaccgaaattcatagttgatgcttcctgtgtttttcctctct 36430230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 12044288 - 12044352
Alignment:
Q  311 ttagtccccaagttttgctaaaaatattttggaatacgatctagaatattttagtacatgatctga 376  Q
    ||||||||||||||||| ||||| ||||||||||  | |||||||||||||| | |||| ||||||    
T  12044288 ttagtccccaagttttgttaaaa-tattttggaacgcaatctagaatattttggaacataatctga 12044352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 23347857 - 23347890
Alignment:
Q  93 gtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    ||||||||||||||||||||||| ||||||||||    
T  23347857 gtgtagtgtgaattgaaaaaagtagaagtcccac 23347890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 26667941 - 26667892
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  26667941 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26667892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 26939538 - 26939489
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  26939538 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26939489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 29167405 - 29167454
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  29167405 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 29167454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 41097036 - 41096987
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||| || |||||||||||||| |||||||| ||||| ||||    
T  41097036 acacaccgaaatacacagttaatgcttcctgtgcttttcttctcttctcc 41096987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 495
Target Start/End: Complemental strand, 15058165 - 15058129
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaatta 495  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  15058165 ttgagatatttctgtactagatctaatatgtgaatta 15058129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 150; Significance: 5e-79; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 34605 - 34797
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgt 128  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34605 tgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacat 34704  T
Q  129 cggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    || ||| |||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34705 cgtatggatcacacatta-----atagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 34797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 35041 - 35209
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||       ||||| |||||||||||||||||    
T  35041 gagactcaatttgagatatttttgtactatatctaatatgagaattacttgctcccaaagcttgtcacttattagttgtgaactttctctataaatagag 35140  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||||| | ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  35141 agctcacacagtgctttcgatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 35209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 34869 - 34934
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatattttag 364  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||    
T  34869 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatattttag 34934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 5e-79; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 29 - 226
Target Start/End: Complemental strand, 27257429 - 27257237
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgt 128  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27257429 tgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacat 27257330  T
Q  129 cggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    | |||| ||||||||||||||     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27257329 cagatggatcacacattagta-----gtgtttatatagtgggggtgtatctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 27257237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 26 - 225
Target Start/End: Original strand, 40864278 - 40864474
Alignment:
Q  26 tattgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattg--aaaaaagtggaagtcc 123  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  40864278 tattgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaaaaatggaagtcc 40864377  T
Q  124 cacgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcacta 223  Q
    ||  ||||||| |||||||||||     |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40864378 cagatcggatggatcacacatta-----gtagtgtttatatagtggaggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcacta 40864472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 27256994 - 27256826
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  27256994 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 27256895  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| ||||||||| | ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  27256894 agctcacatagtgctttcgatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 27256826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 40864700 - 40864868
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||       ||||||| |||||||||||||||||    
T  40864700 gagactcaatttgagatatttttgtactaaatctaatatgagaattacttgctcccaaagttactcacttattagttgtgaactttctctataaatagag 40864799  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||| ||||| | ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  40864800 agctcacacagtactttcgatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 40864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 9650297 - 9650466
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| ||| |||||||||||||    
T  9650297 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagag 9650396  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctg-cttttcctctctgctcc 610  Q
    |||||||||||||| ||||||| | ||||||||| |||| ||||||||| ||  ||||||||||| ||||    
T  9650397 agctcacacagtgcattccacaaatcgaaattcacagttgatgcttcctgtgttttttcctctcttctcc 9650466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 452 - 605
Target Start/End: Complemental strand, 8076805 - 8076644
Alignment:
Q  452 actcaatttgagatattttt-gtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagag 543  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||       ||||| |||||||||||||||||||    
T  8076805 actcaatttgagatattttttgtactagatctaatatatgaattacttgctcccaaagtttctcacttattagatgtgaactttctctataaatagagag 8076706  T
Q  544 ctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||| | || |||||||||||    
T  8076705 ctcacacagtgcattccacacaccgaaattcacagttgatgcttcatgtgtttttcctctct 8076644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 47102287 - 47102128
Alignment:
Q  449 gagactcaatttgagatattttt-gtactagatctaatatgagaattacttgctcccaaagtttctcacttgtgaattttctctataaatagagagctca 547  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| | | |  |   | | |||||||||||||    
T  47102287 gagactcaatttgagatattttttgtactagatctaatatatgaattacttgctcccaaagtttctcacttattagtagt---tgtgaatagagagctca 47102191  T
Q  548 cacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  47102190 cacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 47102128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 40863957 - 40864045
Alignment:
Q  26 tattgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaag 114  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40863957 tattgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaag 40864045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 456 - 610
Target Start/End: Complemental strand, 19641049 - 19640888
Alignment:
Q  456 aatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcac 548  Q
    ||||||| |||||| |||||||||||||| | | |||||||||||||||||||||||||||       ||||||| ||||||||||||||||| | ||||    
T  19641049 aatttgaaatatttgtgtactagatctaacacgtgaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagtgttcac 19640950  T
Q  549 acagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |  || ||||| | ||||||||||||| |||| ||||||| | |||||||||||||| ||||    
T  19640949 attgttctttcgatacaccgaaattcacagttgatgcttcttgtgcttttcctctcttctcc 19640888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 9649844 - 9650033
Alignment:
Q  29 tgttggaacataagtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacg 127  Q
    |||||||||||  ||||||||||||| ||  |||||||||||||||| ||   |||||||||||||||| |||||||||||||||||||||||| ||||     
T  9649844 tgttggaacatgtgtggaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagttccaca 9649943  T
Q  128 tcggatgaa--tcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||   |||||||||     ||||||||||||||||   ||||||| |||||      | |||||||| ||||||||| |||||||||||||||    
T  9649944 tcggatgaaatacacacatta-----gtagtgtttatatagtccaggtgtacatctaa------gaggtacatagttatgtgaatgaagtaagcactaga 9650032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 605
Target Start/End: Original strand, 14927983 - 14928136
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttgtgaatttt-------ctctataaatagagagctcacaca 551  Q
    |||||||||||| ||||||||||||||| | | |||||||| | |||||||||||||||| | | || |       ||||||||||||||  ||||||||    
T  14927983 ttgagatattttagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacaca 14928082  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    |||| ||| ||||||||||||||| |||| ||||||||| |||||||| |||||    
T  14928083 gtgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctct 14928136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 459 - 605
Target Start/End: Original strand, 15351449 - 15351602
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttgtgaatttt-------ctctataaatagagagctcacaca 551  Q
    |||||||||||| ||||||||||||||| | | |||||||| | |||||||||||||||| | | || |       ||||||||||||||  ||||||||    
T  15351449 ttgagatattttagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacaca 15351548  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    |||| ||| ||||||||||||||| |||| ||||||||| |||||||| |||||    
T  15351549 gtgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctct 15351602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 18426660 - 18426516
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  18426660 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 18426561  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| || |||||| |||||||| ||||| ||||    
T  18426560 ccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 18426516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 610
Target Start/End: Original strand, 16459728 - 16459886
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||| ||  ||||||||||||||| | | |||||||| | ||||||||||||||||       || || | || ||||||||||||| ||||||||    
T  16459728 ttgagatacttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaactcacaca 16459827  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||| ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  16459828 gtgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 16459886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 59 - 219
Target Start/End: Complemental strand, 23866902 - 23866754
Alignment:
Q  59 gactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaa-aaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtg 157  Q
    |||||||||||||||| ||   |||||||||||||||| |||||||||||| ||||||||||||||||| | ||||| |  ||||||||     ||||||    
T  23866902 gactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaaagtggaagtcccacattggatgga--acacatta-----gtagtg 23866810  T
Q  158 tttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagc 219  Q
    |||||||| |||||||||||||||||      | |||||||| ||||||||| |||||||||    
T  23866809 tttatataatgggggtgtacctctaa------gaggtacatagttatgtgaatgaagtaagc 23866754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 20488681 - 20488537
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| |||||||||||| ||| |||||    
T  20488681 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacaca 20488582  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||| | |||||||| ||||| ||||    
T  20488581 ccgaaattcacagttgatgcttcgtgtgcttttcttctcttctcc 20488537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 45169292 - 45169436
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||| | ||| |||||    
T  45169292 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacaca 45169391  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| || |||||| |||||||| ||||| ||||    
T  45169392 ccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 45169436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 845986 - 846113
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||||| ||||||| ||| ||| | || ||||||||||| ||| |    
T  845986 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttga 846085  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| ||||||| |||||| ||||    
T  846086 tgcttcctgtgctttttctctcttctcc 846113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 853363 - 853490
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||||| ||||||| ||| ||| | || ||||||||||| ||| |    
T  853363 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttga 853462  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| ||||||| |||||| ||||    
T  853463 tgcttcctgtgctttttctctcttctcc 853490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 1211367 - 1211494
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||||| ||||||| ||| ||| | || ||||||||||| ||| |    
T  1211367 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttga 1211466  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| ||||||| |||||| ||||    
T  1211467 tgcttcctgtgctttttctctcttctcc 1211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 13343308 - 13343417
Alignment:
Q  26 tattgttggaacataagtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    ||||||||||||||  ||||||||||| | ||  ||| ||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||| |||||    
T  13343308 tattgttggaacatgtgtggaaattgaattaaaagacaaaacacaaattttcacgttgggtagaactagtgttgtgtgaattgaaaaaagtggatgtccc 13343407  T
Q  125 acgtcggatg 134  Q
     | |||||||    
T  13343408 gcatcggatg 13343417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 464 - 567
Target Start/End: Complemental strand, 9008899 - 9008789
Alignment:
Q  464 atatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgct 556  Q
    ||||||||||| ||||| ||||||| |||||| ||| ||||||||||||||||||       |||||||||||||||||||||||||||| || || ||     
T  9008899 atatttttgtaatagatttaatatgtgaattatttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctctcatagcgca 9008800  T
Q  557 ttccacacacc 567  Q
    |||||||||||    
T  9008799 ttccacacacc 9008789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 454 - 549
Target Start/End: Original strand, 11247741 - 11247841
Alignment:
Q  454 tcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttc-----tcacttgtgaattttctctataaatagagagctcac 548  Q
    |||||||||| |||||||||||||||| ||||||| |||||| ||| ||||||||||||     | | |||||||||||||||||||||| |||||||||    
T  11247741 tcaatttgagttatttttgtactagatataatatgtgaattatttgttcccaaagtttcacatgttaattgtgaattttctctataaatatagagctcac 11247840  T
Q  549 a 549  Q
    |    
T  11247841 a 11247841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 517 - 605
Target Start/End: Original strand, 29727216 - 29727304
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    |||||||||||||||||||||||||||||||||| |||| |||   ||||| ||||||| |||| ||| ||||| ||||||||||||||    
T  29727216 ttgtgaattttctctataaatagagagctcacacggtgcattctggacaccaaaattcacagttgatgtttcctgtgcttttcctctct 29727304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 226
Target Start/End: Complemental strand, 47102742 - 47102555
Alignment:
Q  29 tgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||  |||||||||||||  ||  |||||||||||||||| ||   |||||||     |||| |||| |||||||||||||||||||||||     
T  47102742 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtag-----gtgttgtgtaaattgaaaaaagtggaagtcccat 47102648  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
      |||||| | ||||||  |  |||  |||||||||||| ||||||||||||||||||     |||||||||||||||||||||||||||||||| ||||    
T  47102647 agcggatggaacacacac-atcagt--agtgtttatatattgggggtgtacctctaata----ggggtacataattatgtgaacgaagtaagcacaagag 47102555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 610
Target Start/End: Complemental strand, 20485259 - 20485176
Alignment:
Q  527 tctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| ||||||| | |||||||| ||||| ||||    
T  20485259 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcgtgtgcttttcttctcttctcc 20485176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 452 - 545
Target Start/End: Complemental strand, 1043973 - 1043873
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagc 544  Q
    |||||||  |||||||||||||||||||||||||| | |||||||||| | ||||||||||||||       |||||||||||||||||||||| |||||    
T  1043973 actcaatgcgagatatttttgtactagatctaatacgtgaattacttgtttccaaagtttctcacatattaattgtgaattttctctataaataaagagc 1043874  T
Q  545 t 545  Q
    |    
T  1043873 t 1043873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 452 - 509
Target Start/End: Complemental strand, 7838837 - 7838780
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 509  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||    
T  7838837 actcaatttgagatatttttgtactagatctaatatttgaattacttgttcccaaagt 7838780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 299 - 364
Target Start/End: Complemental strand, 27257166 - 27257101
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatattttag 364  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||||    
T  27257166 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatattttag 27257101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 19641470 - 19641312
Alignment:
Q  62 taaacacaaattctcacaatgggtagaactagtgtagtgtgaattg---aaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgt 158  Q
    ||||||||||||| ||   ||||||||| |||||  ||||||||||   |||||||||||| || ||| ||| |||||||||| |||||||     ||||    
T  19641470 taaacacaaattcccatgttgggtagaattagtgctgtgtgaattggaaaaaaaagtggaaatctcacatcgaatgaatcacatattagta-----gtgt 19641376  T
Q  159 ttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    |||||||| |||||||| |||||||| |    ||||  |||||||||||||||||||||| |||||||    
T  19641375 ttatatagcgggggtgtgcctctaataa----gggtgtataattatgtgaacgaagtaagtactagag 19641312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 40864547 - 40864609
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatattt 361  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  40864547 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatattt 40864609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 40997723 - 40997825
Alignment:
Q  25 ctattgttggaacataagtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcc 123  Q
    ||||||||||||||   || |||||||||| ||  ||||||| ||||||||  ||| |||||| |||||||||||||||||| ||||||||||||| |||    
T  40997723 ctattgttggaacaagtgtagaaattgagttaaaagactaaatacaaattcctacattgggtaaaactagtgtagtgtgaatcgaaaaaagtggaaatcc 40997822  T
Q  124 cac 126  Q
    |||    
T  40997823 cac 40997825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 461 - 542
Target Start/End: Complemental strand, 48060640 - 48060558
Alignment:
Q  461 gagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-ttgtgaattttctctataaatagaga 542  Q
    ||||||||||||||| | ||||||||||  | ||| ||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  48060640 gagatatttttgtaccaaatctaatatgtaagttaattgttcccaaagtttctcacattgtgaattttttctataaatagaga 48060558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 491 - 610
Target Start/End: Original strand, 8954646 - 8954772
Alignment:
Q  491 aattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaat 583  Q
    ||||||||| ||||||||||||||||||       ||||| ||||||||||||||||||||||||||| ||| ||||  || |||||||||  |||| ||    
T  8954646 aattacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattccgaaccccgaaattcccagttgat 8954745  T
Q  584 gcttcctctgcttttcctctctgctcc 610  Q
    ||||| | | ||||| |||||| ||||    
T  8954746 gcttcatgtactttttctctcttctcc 8954772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 11297495 - 11297443
Alignment:
Q  464 atatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||||||||    
T  11297495 atatttttgtactagatctaatatgtgaattacttgttcacaaagtttctcac 11297443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 527 - 610
Target Start/End: Complemental strand, 14259678 - 14259595
Alignment:
Q  527 tctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||| |||||||||||| ||| ||||   |||||||| |||| ||||||||| |||||||| ||||| ||||    
T  14259678 tctctataaatagagaactcacacagtgcattctacactttgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 14259595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 10499066 - 10499132
Alignment:
Q  83 ggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagta 149  Q
    |||||||||||||| |||||||||||||||||||||||||||   | ||||| | ||||||||||||    
T  10499066 ggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccgaattggatggaacacacattagta 10499132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 10504095 - 10504161
Alignment:
Q  83 ggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagta 149  Q
    |||||||||||||| |||||||||||||||||||||||||||   | ||||| | ||||||||||||    
T  10504095 ggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccgaattggatggaacacacattagta 10504161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 509
Target Start/End: Original strand, 10532157 - 10532207
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 509  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  10532157 ttgagatatttttgtactagatctaatatgtgaattacttaatcccaaagt 10532207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 509
Target Start/End: Original strand, 13343753 - 13343803
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 509  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  13343753 ttgagatatttttgtactagatctaatatgtgaattacttattcccaaagt 13343803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 18330307 - 18330400
Alignment:
Q  62 taaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcc--cacgtcggatgaatcacacattagtagtgt 153  Q
    |||||| ||| || |||| | ||||||| |||||| ||||||||||||||||||||||||||  ||||| ||||  | ||||||||||||||||    
T  18330307 taaacataaaatcccacatttggtagaattagtgttgtgtgaattgaaaaaagtggaagtcccacacgtaggatagaacacacattagtagtgt 18330400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 459 - 509
Target Start/End: Original strand, 47552626 - 47552676
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 509  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  47552626 ttgagatatttttgtactaaatctaatatgtgaattacttactcccaaagt 47552676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 838810 - 838937
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||| ||| ||||||||||||||||||||||||||| ||| |||   || ||||||||||  ||| |    
T  838810 gaattacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttga 838909  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| || |||| |||||| ||||    
T  838910 tgcttcctgtgttttttctctcttctcc 838937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 1203990 - 1204117
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||| ||| ||||||||||||||||||||||||||| ||| |||   || ||||||||||  ||| |    
T  1203990 gaattacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttga 1204089  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| || |||| |||||| ||||    
T  1204090 tgcttcctgtgttttttctctcttctcc 1204117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 1044431 - 1044367
Alignment:
Q  59 gactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcc 123  Q
    ||||||||||||  ||||||| ||  |||||||||||| ||||||||||||||||||| ||||||    
T  1044431 gactaaacacaatgtctcacattgtctagaactagtgtggtgtgaattgaaaaaagtgaaagtcc 1044367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 8954304 - 8954344
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  8954304 taatgggggtacataattgtgtgaacgaagtaagcactaga 8954344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 11016794 - 11016858
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactag 93  Q
    |||||||||||  ||||||||||||||| |||||||| |||||||| || ||| |||||||||||    
T  11016794 tgttggaacatgtgtggaaattgagtaattgactaaatacaaattcccataataggtagaactag 11016858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 610
Target Start/End: Complemental strand, 16580976 - 16580818
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||| | ||||||||||||||       |||| || | || | |||||||| || ||||||||    
T  16580976 ttgagatatttaagtactagatctaataggtgtattacttgtttccaaagtttctcacttattaattgtaaactatcccaataaatagggaactcacaca 16580877  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||  ||||| ||||||||| |||| ||||||| | |||||||| ||||| ||||    
T  16580876 gtgcattgtacacaacgaaattcacagttgatgcttcatgtgcttttcttctcttctcc 16580818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 19097441 - 19097401
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  19097441 taatgggggtacataattgtgtgaacgaagtaagcactaga 19097401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 10488637 - 10488700
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgc-tcccaaagtttctc 514  Q
    |||||||||||||||||||| ||||| |||||||||| | ||||||| | ||||||||||||||    
T  10488637 actcaatttgagatatttttctactaaatctaatatgtgcattactttcttcccaaagtttctc 10488700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 19096937 - 19096843
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccg-aaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||   || ||| ||||||| |||| ||||||| | || ||||||||||| ||||    
T  19096937 ttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaaattcacagttgatgcttcatgtgtttttcctctcttctcc 19096843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 11017018 - 11017094
Alignment:
Q  84 gtagaactagtgtagtgtgaattg-----aaaaaagtggaagtcccacgtcggatgaat--cacacattagtagtgt 153  Q
    ||||||||||||||||||||||||     |||||| |||||||||||| ||||||| ||  ||||||||||||||||    
T  11017018 gtagaactagtgtagtgtgaattgtagaaaaaaaaatggaagtcccacatcggatggatcacacacattagtagtgt 11017094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 452 - 513
Target Start/End: Complemental strand, 15565668 - 15565607
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttct 513  Q
    ||||||||||||||||||||||||||||| | ||||| ||||| |||  ||| |||||||||    
T  15565668 actcaatttgagatatttttgtactagatttcatatgtgaatttcttattccaaaagtttct 15565607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 452 - 513
Target Start/End: Complemental strand, 44784100 - 44784040
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttct 513  Q
    |||||||||||||||| | ||||||| |||||||||| ||| |||||| |||||||||||||    
T  44784100 actcaatttgagatatatctgtactaaatctaatatgtgaa-tacttgttcccaaagtttct 44784040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 838398 - 838438
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  838398 taatgggggtacatagttgtgtgaacgaagtaagcactaga 838438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 845554 - 845594
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  845554 taatgggggtacatagttgtgtgaacgaagtaagcactaga 845594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 852935 - 852975
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  852935 taatgggggtacatagttgtgtgaacgaagtaagcactaga 852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 1044304 - 1044241
Alignment:
Q  158 tttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    |||||||| |||||||||| ||||||     | |||||| |||||||||||||||||||||||||||||    
T  1044304 tttatataatgggggtgtagctctaa-----gagggtacgtaattatgtgaacgaagtaagcactagag 1044241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 1203578 - 1203618
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  1203578 taatgggggtacatagttgtgtgaacgaagtaagcactaga 1203618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 1210939 - 1210979
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  1210939 taatgggggtacatagttgtgtgaacgaagtaagcactaga 1210979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 13346244 - 13346368
Alignment:
Q  26 tattgttggaacataagtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||| |||||||||  ||||||||||| | ||  ||| ||||| ||||| ||||  | |||||||||||||| |||||||||||||||| ||||  ||||    
T  13346244 tattattggaacatgtgtggaaattgaattaaaagacaaaacataaattttcacgtttggtagaactagtgttgtgtgaattgaaaaaaatggatatccc 13346343  T
Q  125 acgtcggatgaatcacacattagta 149  Q
     ||| ||||| | |||||| |||||    
T  13346344 gcgttggatggaacacacaatagta 13346368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 610
Target Start/End: Complemental strand, 32302586 - 32302428
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||| ||||||||| | | |||||||| | ||||| ||||||||||       || || | |||||||||||| ||| || |||      
T  32302586 ttgagatatttaagtactggatctaataggtgcattacttgtttccaaaatttctcacttattagttgtaaactatctctataaatatagaactgacatg 32302487  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||| ||||||||||||||| |||| ||| ||||| |||||||| ||||| ||||    
T  32302486 gtgcattctacacaccgaaattcacagttgatgtttcctgtgcttttcttctcttctcc 32302428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 599
Target Start/End: Complemental strand, 36477652 - 36477577
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttc 599  Q
    ||||||| ||||||||||||||||||||||||||| ||       |||||||||||||| |||| ||||||||| || |||||    
T  36477652 ttgtgaaatttctctataaatagagagctcacacaatg-------cacaccgaaattcacagttgatgcttcctgtgtttttc 36477577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 18324392 - 18324455
Alignment:
Q  62 taaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 125  Q
    |||||||||| || |||| | |||||||||||||| |||| ||||||||||| | |||||||||    
T  18324392 taaacacaaaatcccacatttggtagaactagtgttgtgtaaattgaaaaaaatagaagtccca 18324455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 496
Target Start/End: Original strand, 10499444 - 10499481
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattac 496  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  10499444 ttgagatatttttgtactaaatctaatatgtgaattac 10499481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 496
Target Start/End: Original strand, 10504473 - 10504510
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattac 496  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  10504473 ttgagatatttttgtactaaatctaatatgtgaattac 10504510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 26341870 - 26341821
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  26341870 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26341821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 517 - 565
Target Start/End: Complemental strand, 2629338 - 2629290
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||| ||||||||||||||||| |||||||||| ||| | |||||||||    
T  2629338 ttgtaaattttctctataaatatagagctcacatagttcattccacaca 2629290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 9009191 - 9009155
Alignment:
Q  190 ggggtacataattatgtgaacgaagtaagcactagag 226  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  9009191 ggggtgcataattatgtgaacaaagtaagcactagag 9009155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 121
Target Start/End: Complemental strand, 11060307 - 11060271
Alignment:
Q  85 tagaactagtgtagtgtgaattgaaaaaagtggaagt 121  Q
    |||||||||||| |||||||||||||| |||||||||    
T  11060307 tagaactagtgttgtgtgaattgaaaatagtggaagt 11060271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 517 - 549
Target Start/End: Complemental strand, 11265784 - 11265752
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcaca 549  Q
    |||||||||||||||||||||| ||||||||||    
T  11265784 ttgtgaattttctctataaatatagagctcaca 11265752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 40997829 - 40997861
Alignment:
Q  151 tgtagtgtttatatagtgggggtgtacctctaa 183  Q
    |||| ||||||||||||||||||||||||||||    
T  40997829 tgtaatgtttatatagtgggggtgtacctctaa 40997861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 148; Significance: 8e-78; HSPs: 6)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 51794 - 51988
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  51794 attgttggaacatatgtgaaaattgagtaattgactaaacacaaattcccacaatgggtagaattagtgtagtgtgaattgaaaaaagtggaagtcacac 51893  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    |||||||| |||||||||||     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51894 gtcggatggatcacacatta-----gtagtgtttatatagtaggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 51988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 46857 - 47045
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgt 128  Q
    |||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  46857 tgttggaacatatgtggagattgagtaattgactaaacacaaattttcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacat 46956  T
Q  129 cggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    |||||| |    ||||||     |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  46957 cggatgga----acatta-----gtagtgtttatatagtaggggtgtccctctaattaatgagggtacataattatgtgaacgatgtaagcactagag 47045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 47310 - 47478
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  47310 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 47409  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||||| || ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  47410 agctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 47478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 52254 - 52422
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  52254 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 52353  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||||| || ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  52354 agctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 52422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 52062 - 52125
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  52062 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 52125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 47118 - 47181
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| |||||||||||||||||||||||||||||| |||  | ||||||||||||||    
T  47118 gaaagtgttttcttagtccccaagttttgctaaaaatattttagaacgcaatctagaatatttt 47181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 1e-76; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 3992653 - 3992845
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgt 128  Q
    |||||||||||| | ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  3992653 tgttggaacatatgcggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaggtggaagtcccacat 3992752  T
Q  129 cggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    |||||| |||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3992753 cggatggatcacacatta-----gtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 3992845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 34561619 - 34561425
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||  | ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  34561619 attgttggaacatttgtggaaattgagtaattgactaaacacaaattcctataatgggtagaattagtatagtgtgaattgaaaaaagtggaagtcccac 34561520  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    |||||||| |||||||||||||||| |     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34561519 gtcggatggatcacacattagtagtat-----ttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaatgaagtaagcactagag 34561425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 449 - 602
Target Start/End: Original strand, 7902448 - 7902608
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  7902448 gagactcaatttgagatatttttatactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 7902547  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctc 602  Q
    ||||||||||||||||| |||||||||||||||| | || ||||||||| |||||||||||    
T  7902548 agctcacacagtgctttacacacaccgaaattcacatttgatgcttcctgtgcttttcctc 7902608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 34561181 - 34561013
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  34561181 gagactcaatttgagatatttttgtactagatttaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 34561082  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| ||||||||| | ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  34561081 agctcacatagtgctttcgatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 34561013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 42 - 226
Target Start/End: Complemental strand, 41817982 - 41817807
Alignment:
Q  42 gtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcaca 141  Q
    ||||||||||||||| ||| |||||||||||||  ||||||||||||| || |||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  41817982 gtggaaattgagtaattgattaaacacaaattcctacaatgggtagaattaatgtagtgtgaattgaaaaaagtggaagttccacatcggatggatcaca 41817883  T
Q  142 cattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
     |||||||||||     |||||||||||||||||| |||||||     |||||||||||||||||||||||||||||||||||||    
T  41817882 tattagtagtgt-----ttatatagtgggggtgtatctctaata----ggggtacataattatgtgaacgaagtaagcactagag 41817807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 13521322 - 13521491
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| ||| |||||||||||||    
T  13521322 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagag 13521421  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctg-cttttcctctctgctcc 610  Q
    |||||||||||||| ||||||| | ||||||||| |||| ||||||||| ||  ||||||||||| ||||    
T  13521422 agctcacacagtgcattccacaaatcgaaattcacagttgatgcttcctgtgttttttcctctcttctcc 13521491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 3997402 - 3997567
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagag 541  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||    
T  3997402 gagactcaatttgagatatttttgtactagatcta---tgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 3997498  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| | |||||| |||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  3997499 agctcacatattgctttacacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 3997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 7899836 - 7899961
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7899836 attgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtggtgtgaattgaaaaaagtggaagtcccac 7899935  T
Q  127 gtcggatgaatcacacattagtagtgt 153  Q
     ||  ||| ||||||||||||||||||    
T  7899936 atc-aatggatcacacattagtagtgt 7899961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 449 - 575
Target Start/End: Original strand, 31297831 - 31297965
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattac-ttgctcccaaagtttctcac-------ttgtgaattttctctataaataga 540  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       ||||||| | ||||||||||||||    
T  31297831 gagactcaatttgagatatttttgtactagatctaatatgagaattactttgctcccaaagtttctcacttattagttgtgaactctctctataaataga 31297930  T
Q  541 gagctcacacagtgctttccacacaccgaaattca 575  Q
    ||||||||||||||| ||||| |||||||||||||    
T  31297931 gagctcacacagtgcattccatacaccgaaattca 31297965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 47575419 - 47575251
Alignment:
Q  449 gagactcaatttgagatattttt-gtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaataga 540  Q
    ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| | ||||||||||||       |||||||||||||||||| |||    
T  47575419 gagactcaatttgagatattttttgtactagatctaatatatgaattacttgctcc-atagtttctcacttattagttgtgaattttctctataaaaaga 47575321  T
Q  541 gagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||  ||| || ||||||||||| ||||    
T  47575320 gagctcacacagtgcattccacacaccgaaattcaaagttgatgcaacctgtgtttttcctctcttctcc 47575251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 459 - 605
Target Start/End: Original strand, 8660750 - 8660903
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||||       ||||||||||||| |||||||||||||||||||    
T  8660750 ttgagatatttttgtactagatctaatatgaaaattatttgttcccaaagttcttcacttattagtagtgaattttctctgtaaatagagagctcacaca 8660849  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    ||||  |  ||||||||| ||||| |||| ||||||||| ||||||||||||||    
T  8660850 gtgcagtatacacaccgagattcacagttgatgcttcctgtgcttttcctctct 8660903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 41817552 - 41817371
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctcta--------- 532  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| ||||||||             
T  41817552 gagactcgatttgagatgtttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctagagagcttc 41817453  T
Q  533 ----taaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
        ||||||||||||||||||||||| ||| ||||||||||||||| |||| ||||||| | || ||||||||||| ||||    
T  41817452 tctgtaaatagagagctcacacagtgcattctacacaccgaaattcacagttgatgcttcttgtgtttttcctctcttctcc 41817371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 13520869 - 13521058
Alignment:
Q  29 tgttggaacataagtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacg 127  Q
    |||||||||||  ||||||||||||| ||  |||||||||||||||| ||   |||||||||||||||| |||||||||||||||||||||||| ||||     
T  13520869 tgttggaacatgtgtggaaattgagttaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagttccaca 13520968  T
Q  128 tcggatgaa--tcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||   |||||||||     ||||||||||||||||   ||||||| |||||      | |||||||| ||||||||| |||||||||||||||    
T  13520969 tcggatgaaatacacacatta-----gtagtgtttatatagtccaggtgtacatctaa------gaggtacatagttatgtgaatgaagtaagcactaga 13521057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 15225881 - 15225754
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||||| |||| |    
T  15225881 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacagagtgcattctacacaccgaaattcacagttga 15225782  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| |||||||| ||||| ||||    
T  15225781 tgcttcctgtgcttttcttctcttctcc 15225754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 30 - 220
Target Start/End: Original strand, 31297409 - 31297593
Alignment:
Q  30 gttggaacataagtggaaattgagtaactga--ctaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacg 127  Q
    ||||||||||  |||||||||||||||   |  |||||||||||||||||   |||||||||||||||| |||||||||| ||||||||||||| | ||     
T  31297409 gttggaacatgcgtggaaattgagtaaaaaaggctaaacacaaattctcatgttgggtagaactagtgttgtgtgaattg-aaaaagtggaagttctaca 31297507  T
Q  128 tcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagca 220  Q
    ||||||| | ||||||  | |  |||| ||||||||||||||||||||||||    |||||||||||||||  ||| ||||||||||||||||    
T  31297508 tcggatggaacacaca-catt--tgtaatgtttatatagtgggggtgtacct----ttaatgggggtacattcttaagtgaacgaagtaagca 31297593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 610
Target Start/End: Original strand, 15011163 - 15011321
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| ||||||||    
T  15011163 ttgagatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacaca 15011262  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||  ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  15011263 gtgcattatacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 15011321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 10713673 - 10713529
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcact-------tgtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | |||||||||||||||       ||| |||  |||||||||||||||| |||||||||||| ||| |||||    
T  10713673 tactagatctaataggtgcattacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacaca 10713574  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  10713573 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 10713529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 10927443 - 10927299
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcact-------tgtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | |||||||||||||||       ||| |||  |||||||||||||||| |||||||||||| ||| |||||    
T  10927443 tactagatctaataggtgcattacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacaca 10927344  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  10927343 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 10927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 12488531 - 12488387
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  12488531 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 12488432  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| || |||||| |||||||| ||||| ||||    
T  12488431 ccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 12488387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 14868480 - 14868573
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||||||||||||||| |||   || |||||||||| |||| ||| ||||| |||||||||||||| ||||    
T  14868480 ttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgtgcttttcctctcttctcc 14868573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 14877454 - 14877361
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||||||||||||||| |||   || |||||||||| |||| ||| ||||| |||||||||||||| ||||    
T  14877454 ttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcctgtgcttttcctctcttctcc 14877361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 14953467 - 14953560
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  14953467 ttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 39320771 - 39320586
Alignment:
Q  26 tattgttggaacataagtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    ||||||||||||||  ||||||||||||| ||  || |||| |||||||| ||   |||||||||||||||       ||||||||||||||||||| |     
T  39320771 tattgttggaacatgtgtggaaattgagttaaaagattaaatacaaattcgcatgttgggtagaactagtg-------aattgaaaaaagtggaagttct 39320679  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactag 224  Q
    || | ||||  |||||||||||||| |||     ||||||||||||||||||||||||||  |||||   ||||||||||||||||||||||| ||||||    
T  39320678 acattggatagatcacacattagtaatgt-----ttatatagtgggggtgtacctctaat--atgggc--acataattatgtgaacgaagtaaacactag 39320588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 25690671 - 25690583
Alignment:
Q  522 aattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  25690671 aattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 25690583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 9185062 - 9185189
Alignment:
Q  490 gaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||||       ||||| |||||||| |||||||||||||||||| ||| |||   || |||||||||| |||| |    
T  9185062 gaattacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattctggaccccgaaattcagagttga 9185161  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    || ||||| |||||||||||||| ||||    
T  9185162 tgattcctgtgcttttcctctcttctcc 9185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 14899028 - 14899121
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||||||||||||||| |||   || |||||||||| |||| ||| ||| | |||||||||||||| ||||    
T  14899028 ttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatgattcatgtgcttttcctctcttctcc 14899121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 452 - 543
Target Start/End: Original strand, 1150700 - 1150797
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctc-------acttgtgaattttctctataaatagagag 543  Q
    |||||||||||||||||||||||| | |||||||||| |||| ||||| ||||||||| ||||       |||||||||||||||||||||||||||||    
T  1150700 actcaatttgagatatttttgtacca-atctaatatgtgaatcacttgttcccaaagtgtctcacaaagtacttgtgaattttctctataaatagagag 1150797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 3997210 - 3997273
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  3997210 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaaagcaatctagaatatttt 3997273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 7902256 - 7902319
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  7902256 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 7902319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 9190927 - 9191054
Alignment:
Q  490 gaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||||       ||||| |||||||| |||||||||||||||||| ||| ||    || |||||||||| |||| |    
T  9190927 gaattacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattatggaccccgaaattcagagttga 9191026  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    || ||||| |||||||||||||| ||||    
T  9191027 tgattcctgtgcttttcctctcttctcc 9191054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 364
Target Start/End: Complemental strand, 34561353 - 34561288
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatattttag 364  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||| ||||||||||    
T  34561353 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctaaaatattttag 34561288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 376
Target Start/End: Complemental strand, 41817736 - 41817659
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatattttagtacatgatctga 376  Q
    ||||| ||||| |||||||| ||||||||||||| ||||||||||| || |||||||||||||| | |||| ||||||    
T  41817736 gaaagtgttttcttagtccctaagttttgctaaatatattttggaacacaatctagaatattttggaacataatctga 41817659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 7902121 - 7902184
Alignment:
Q  169 ggggtgtacctctaattaatgggggtac------ataattatgtgaacgaagtaagcactagag 226  Q
    ||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  7902121 ggggtgtacctctaattaatgggggtacataattataattatgtgaacgaagtaagcactagag 7902184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 452 - 565
Target Start/End: Original strand, 52742564 - 52742684
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagc 544  Q
    ||||||||||| |||||||| |||||||||||||| | |||||||||  |  |||| |||||| |       |||| |||||||||||||||||||||||    
T  52742564 actcaatttgatatatttttctactagatctaatacgtgaattacttattttcaaaatttctcgcgtattagttgtcaattttctctataaatagagagc 52742663  T
Q  545 tcacacagtgctttccacaca 565  Q
    ||||| ||| | |||||||||    
T  52742664 tcacatagttcattccacaca 52742684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 36209151 - 36209215
Alignment:
Q  59 gactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcc 123  Q
    ||||||||||||| || ||||  || || ||||||||| ||||||||||||||||||||||||||    
T  36209151 gactaaacacaaagtcccacataggatataactagtgttgtgtgaattgaaaaaagtggaagtcc 36209215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 610
Target Start/End: Complemental strand, 18023276 - 18023210
Alignment:
Q  544 ctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| ||| ||| ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  18023276 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 18023210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 551
Target Start/End: Complemental strand, 26034904 - 26034836
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||| ||||||||||||||||       ||||||| |||||||||||||||||||||||||||    
T  26034904 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacaca 26034836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 15541643 - 15541602
Alignment:
Q  85 tagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  15541643 tagaactagtgtagtgcgaattgaagaaagtggaagtcccac 15541602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 26035243 - 26035206
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcact 222  Q
    |||||||||||||||||| |||||||||||||||||||    
T  26035243 taatgggggtacataattgtgtgaacgaagtaagcact 26035206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 55074525 - 55074432
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtc 122  Q
    |||||||||||  ||  ||||||||| |  ||||||||||||||| | | | | ||||||| |||||| ||||||||||||||||||| |||||    
T  55074525 tgttggaacatgcgtaaaaattgagttaaagactaaacacaaatttttatatttggtagaattagtgttgtgtgaattgaaaaaagtgaaagtc 55074432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 14891262 - 14891297
Alignment:
Q  190 ggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14891262 ggggtacataattgtgtgaacgaagtaagcactaga 14891297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 498
Target Start/End: Original strand, 43477340 - 43477379
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattactt 498  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  43477340 ttgagatatttttgtactagatctaatgttagaattactt 43477379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 9184749 - 9184787
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcacta 223  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  9184749 taatgggggtacatatttgtgtgaacgaagtaagcacta 9184787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 9190588 - 9190626
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcacta 223  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  9190588 taatgggggtacatatttgtgtgaacgaagtaagcacta 9190626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 361
Target Start/End: Original strand, 31297663 - 31297724
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatattt 361  Q
    ||||| ||||| |||| |||||||||||||| |||||||||||||| || ||||| |||||||    
T  31297663 gaaagtgttttcttagcccccaagttttgct-aaaatattttggaacacaatctaaaatattt 31297724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 39320244 - 39320151
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| |||| |||||||||||||||||||||| | | ||| ||| ||||||||| |  ||| ||| |||   |||||||||||||| ||||    
T  39320244 ttgtgaactttcactataaatagagagctcacacaattcattcgacaaaccgaaatttaacgttgatgtttcacgtgcttttcctctcttctcc 39320151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 461 - 509
Target Start/End: Original strand, 26187991 - 26188039
Alignment:
Q  461 gagatatttttgtactagatctaatatgagaattacttgctcccaaagt 509  Q
    ||||||||||| |||||||||||||||| |||||| || |||| |||||    
T  26187991 gagatatttttatactagatctaatatgtgaattatttactccaaaagt 26188039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 521 - 549
Target Start/End: Complemental strand, 32545561 - 32545533
Alignment:
Q  521 gaattttctctataaatagagagctcaca 549  Q
    |||||||||||||||||||||||||||||    
T  32545561 gaattttctctataaatagagagctcaca 32545533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 8e-75; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 6296796 - 6296985
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgt 128  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  6296796 tgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagacccacat 6296895  T
Q  129 cggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcacta 223  Q
    |||||| |||||||||||     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6296896 cggatggatcacacatta-----gtagtgtttatatagtgggggtgtacctctaattaatggggttacataattatgtgaacaaagtaagcacta 6296985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 10160056 - 10160225
Alignment:
Q  449 gagactcaatttgagatattttt-gtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaataga 540  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||       ||||| |||||||| |||||||    
T  10160056 gagactcaatttgagatattttttgtactagatctaatatgagaattacttactcccaaagtttctcacttattagttgtgaactttctctacaaataga 10160155  T
Q  541 gagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  10160156 gagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 10160225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 28856297 - 28856146
Alignment:
Q  29 tgttggaacataagtggaaatt-gagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacg 127  Q
    |||||||| ||| ||| ||||| |||||| |||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  28856297 tgttggaaaatatgtgaaaatttgagtaattgactaaacataaattcacacaatgggtagaactaatgtagtgtgaattgaaaaaagtggaagtcccaca 28856198  T
Q  128 tcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaat 184  Q
    || |||| ||||||||||||||     |||||||||| |||||| ||||||||||||    
T  28856197 tcagatggatcacacattagta-----gtgtttatatggtggggatgtacctctaat 28856146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 452 - 610
Target Start/End: Complemental strand, 28855884 - 28855720
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctc-------acttgtgaattttctctataaatagagagc 544  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       | ||||||| |||| |||||||||||||||    
T  28855884 actcaagttgagatatttttgtactagatctaatatgagaattacttgcttccaaagtttctcatttattagttgtgaa-tttccctataaatagagagc 28855786  T
Q  545 tcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||| ||||| ||| ||||||||||||||| |||| ||| ||||| || ||||||||||| ||||    
T  28855785 tcacaaagtgcattcgacacaccgaaattcacagttgatgattcctatgtttttcctctcttctcc 28855720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 6297230 - 6297397
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||       |||| || |||||||| ||||||||    
T  6297230 gagactcaatttgagatacttttgtactagatctaatatgagaattgcttgctcccaaagtttatcacttattagttgtcaactttctcta-aaatagag 6297328  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||| ||||| | |||| |||||||| |||| ||||||| | |||||||||||||| ||||    
T  6297329 agctcacacagttctttctatacacagaaattcacagttgatgcttcatgtgcttttcctctcttctcc 6297397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 28 - 226
Target Start/End: Original strand, 10159600 - 10159789
Alignment:
Q  28 ttgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 125  Q
    ||||||||||||  |||||||||||||  ||  |||||||||||||||| ||   | |||||||||||||| ||||||||||||||||||||||||||||    
T  10159600 ttgttggaacatctgtggaaattgagttaaaaagactaaacacaaattcccatgttaggtagaactagtgttgtgtgaattgaaaaaagtggaagtccca 10159699  T
Q  126 cgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    | ||||||| | |||| ||||     ||||||||||||||||||||||||||||||||      | |||||||| ||||||| |||||||||||||||||    
T  10159700 catcggatggaacacatatta-----gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtggacgaagtaagcactaga 10159788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 460 - 610
Target Start/End: Complemental strand, 25375635 - 25375478
Alignment:
Q  460 tgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacag 552  Q
    |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||| ||||||    
T  25375635 tgagatatatttgtactagatctaatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagcttacacag 25375536  T
Q  553 tgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||| ||| |||||| |||||||| |||| ||| ||||  | |||||||||||| ||||    
T  25375535 tgcattctacacactgaaattcacagttgatgattccggtacttttcctctcttctcc 25375478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 459 - 610
Target Start/End: Complemental strand, 22845149 - 22844991
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||       ||||||||||||||||||||||||||||||||| |    
T  22845149 ttgagatatttttgtactagatctaatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacata 22845050  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||  |  ||| | ||||||||| | || ||||||| | || ||||||||||| ||||    
T  22845049 gtgcaatgtacagaacgaaattcacaattgatgcttcttgtgtttttcctctcttctcc 22844991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 30658928 - 30658766
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||| |||      |||||||||||||||||||       ||||| |||||| ||||||||||    
T  30658928 gagactcaatttgagatatttttgtactagatctaatatgataat------ctcccaaagtttctcacttattagttgtgaactttctccataaatagag 30658835  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||| ||  ||||||| |||| ||||||| | || || |||||||| ||||    
T  30658834 agctcacacagtgcattccacatacacaaattcacagttgatgcttcatatgtttgtcctctcttctcc 30658766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 91 - 225
Target Start/End: Complemental strand, 22845518 - 22845388
Alignment:
Q  91 tagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaa--tcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaat 188  Q
    |||||||||||||||||| ||||||||||||||| | ||||||| |  |||||||| |     ||||||||||||| |||||||||||||||||||||||    
T  22845518 tagtgtagtgtgaattga-aaaagtggaagtcccgcatcggatggatctcacacatca-----gtagtgtttatatggtgggggtgtacctctaattaat 22845425  T
Q  189 gggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||| ||||| |||||||| || ||| |||||||||||    
T  22845424 gggagtacaaaattatgtaaatgaattaagcactaga 22845388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 610
Target Start/End: Original strand, 23068100 - 23068258
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||| | |||||||||||| |||       || || | |||||||||||||||| ||||||||    
T  23068100 ttgagatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacaca 23068199  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||| ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  23068200 gtgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 23068258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 1284247 - 1284103
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  1284247 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 1284148  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| || |||||| |||||||| ||||| ||||    
T  1284147 ccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 1284103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 459 - 610
Target Start/End: Original strand, 7559697 - 7559856
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctc--------acttgtgaattttctctataaatagagagctcacac 550  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||  ||||||||||        | ||||||||||||||||||||||||||||||||||    
T  7559697 ttgaaatatttttgtactagatctgatatgtgaattacttgctcgtaaagtttctctttttattagttgtgaattttctctataaatagagagctcacac 7559796  T
Q  551 agtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    | ||| |||   ||||  ||||||| |||| ||||||||| || |||| |||||| ||||    
T  7559797 aatgcattctggacacttaaattcacagttgatgcttcctgtgttttttctctcttctcc 7559856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 24292840 - 24292967
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||| ||||||||| ||| |||   || |||||||||| |||| |    
T  24292840 gaattacttgttcccaaagtttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttga 24292939  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| |||||||||||||| ||||    
T  24292940 tgcttcctgtgcttttcctctcttctcc 24292967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 30344328 - 30344421
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  30344328 ttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 30344421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 34070135 - 34070008
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||| ||||||||| ||| ||| |||||||||||| || |||| |    
T  34070135 gaattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttga 34070036  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||  |||||||| ||||| ||||    
T  34070035 tgcttccagtgcttttcttctctcctcc 34070008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 516
Target Start/End: Original strand, 30641455 - 30641515
Alignment:
Q  456 aatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  30641455 aatttgagatatttttgtactagatctaatatgtgaattacttgttccaaaagtttctcac 30641515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 24286306 - 24286399
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||| ||||||||| ||| |||   || |||||||||| |||| ||||||||| |||||||||||||| ||||    
T  24286306 ttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 24286399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 452 - 571
Target Start/End: Original strand, 30640334 - 30640460
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttc-------tcacttgtgaattttctctataaatagagagc 544  Q
    |||||||||||||||||| |||| ||||||||||||| |||||||||| | |||||||| |       | |||||||||||||||||||||||| | |||    
T  30640334 actcaatttgagatatttctgtagtagatctaatatgtgaattacttgttgccaaagttacttatacattacttgtgaattttctctataaataaaaagc 30640433  T
Q  545 tcacacagtgctttccacacaccgaaa 571  Q
    ||||| | | |  ||||||||||||||    
T  30640434 tcacaaaattcactccacacaccgaaa 30640460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 567
Target Start/End: Original strand, 17452933 - 17453053
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt------------gtgaattttctctataaatagagagctc 546  Q
    |||||||||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||            || ||||||||||||||||||||| |||    
T  17452933 ttgagatatttttgtactagatataacatgtgaattacttgttcccaaagtttctcacttattagattagttgtaaattttctctataaatagagatctc 17453032  T
Q  547 acacagtgctttccacacacc 567  Q
    ||| ||| | |||||||||||    
T  17453033 acatagtacattccacacacc 17453053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 17329342 - 17329272
Alignment:
Q  43 tggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaa 113  Q
    |||||||||||||| |||||||||| |||||  || |||||||||||||| |||| |||||||||||||||    
T  17329342 tggaaattgagtaattgactaaacataaatttccataatgggtagaactattgtaatgtgaattgaaaaaa 17329272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 30659271 - 30659166
Alignment:
Q  109 aaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtga 208  Q
    |||||||||||||||||| ||||||| | || ||||||     ||||||||||||||||||||||||||||||||      | |||||||| |||| |||    
T  30659271 aaaaagtggaagtcccacatcggatggaaca-acatta-----gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatttga 30659184  T
Q  209 acgaagtaagcactagag 226  Q
    ||||||||||||||||||    
T  30659183 acgaagtaagcactagag 30659166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 6856913 - 6856786
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||||||||||||| | | |||     ||||||||||| |||| |    
T  6856913 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatacattctggggaccgaaattcacagttga 6856814  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| |||||||| ||||| ||||    
T  6856813 tgcttcctgtgcttttcttctcttctcc 6856786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 598
Target Start/End: Complemental strand, 26897343 - 26897228
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||| ||||||||| ||| |||   || |||||||||| |||| |    
T  26897343 gaattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggactccgaaattcacagttga 26897244  T
Q  583 tgcttcctctgctttt 598  Q
    |||||||| |||||||    
T  26897243 tgcttcctgtgctttt 26897228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 30637293 - 30637204
Alignment:
Q  91 tagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaa 183  Q
    |||||||||||||||||||||||||||||||||| | ||||| | ||| |||| |  ||   |||||||||||||||||||||||||||||||    
T  30637293 tagtgtagtgtgaattgaaaaaagtggaagtcccgcatcggacggatcccacact-tta--ttagtgtttatatagtgggggtgtacctctaa 30637204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 30659370 - 30659274
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagt 121  Q
    |||||||||||||  |||||||||||||  ||  ||||||||| ||| || ||   |||||||||||||||| ||||||||||||||||||||||||    
T  30659370 attgttggaacatgtgtggaaattgagttaaaaagactaaacaaaaactcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagt 30659274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 610
Target Start/End: Complemental strand, 42248901 - 42248816
Alignment:
Q  525 tttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||||| ||||||||| ||| ||| |||||||||||| || | || ||||||||| |||||||| ||||| ||||    
T  42248901 tttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacaattgatgcttcctgtgcttttcttctcttctcc 42248816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 377702 - 377795
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||| ||||||||||||||||||||| | ||| || |  ||||||||||||| |||| ||||||||| || ||||| ||||| ||||    
T  377702 ttgtgaagtttttctataaatagagagctcacataatgcattacggacaccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 377795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 598
Target Start/End: Complemental strand, 9785895 - 9785751
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||| | ||||||||||||||       |||| || | || ||||||||||||| ||  ||||    
T  9785895 ttgagatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaact--caca 9785798  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgctttt 598  Q
    |||| ||  ||||||||||||||| |||| ||||||||| |||||||    
T  9785797 gtgcattttacacaccgaaattcacagttgatgcttcctgtgctttt 9785751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 132
Target Start/End: Complemental strand, 30635913 - 30635872
Alignment:
Q  91 tagtgtagtgtgaattgaaaaaagtggaagtcccacgtcgga 132  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  30635913 tagtgtagtgtgaattgaaaaaagtggaagtcccacatcgga 30635872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 24285826 - 24285866
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  24285826 taatgggggtacataattgtgtgaacgaagtaagcactaga 24285866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 24292503 - 24292543
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  24292503 taatgggggtacataattgtgtgaacgaagtaagcactaga 24292543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 35602745 - 35602657
Alignment:
Q  92 agtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaa 183  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||| | ||||||  | ||  |||||||||||||| ||| |||||||||||||    
T  35602745 agtgttgtgtgaattgaaaaaagtggaagtctcacatcggatggaacacaca-catta--gtagtgtttatatattggaggtgtacctctaa 35602657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 25375971 - 25375909
Alignment:
Q  160 tatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcacta 223  Q
    ||||||||||||||||| || |||||||||| | ||||||||| |||||| |||||||||||||    
T  25375971 tatatagtgggggtgtaactttaattaatggag-tacataattgtgtgaatgaagtaagcacta 25375909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 6297059 - 6297122
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||| |||||||||| || ||||||||||||||  | ||||||||||||||    
T  6297059 gaaagtgttttcttagttcccaagttttactgaaaatattttggaacgcaatctagaatatttt 6297122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 183
Target Start/End: Original strand, 19588688 - 19588719
Alignment:
Q  152 gtagtgtttatatagtgggggtgtacctctaa 183  Q
    ||||||||||||||||||||||||||||||||    
T  19588688 gtagtgtttatatagtgggggtgtacctctaa 19588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 362
Target Start/End: Complemental strand, 28856067 - 28856017
Alignment:
Q  311 ttagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||||||||||||||||| ||||||||||||||  | ||||||||||||||    
T  28856067 ttagtccccaagttttgct-aaaatattttggaacgcaatctagaatatttt 28856017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 42249389 - 42249350
Alignment:
Q  186 aatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  42249389 aatgggggtacataattgtgtgaacgaagtaagcgctaga 42249350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 551
Target Start/End: Complemental strand, 17327742 - 17327708
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacaca 551  Q
    |||| ||||||||||||||||||||||||||||||    
T  17327742 ttgtaaattttctctataaatagagagctcacaca 17327708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 599
Target Start/End: Complemental strand, 30635478 - 30635393
Alignment:
Q  517 ttgtgaattttctctataaata--gagagctcacacagtgctttccacacaccg-aaattcatagttaatgcttcctctgcttttc 599  Q
    ||||||||||||| ||||||||   |||||||||| ||||| ||  |||||||| ||||||| |||| ||||||||| ||||||||    
T  30635478 ttgtgaattttctttataaatatttagagctcacaaagtgcattttacacaccgaaaattcacagttgatgcttcctgtgcttttc 30635393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 18345074 - 18345025
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  18345074 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 18345025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 26903269 - 26903229
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||| ||||||||||| | ||||||||||||||||||||||    
T  26903269 taataggggtacataagtgtgtgaacgaagtaagcactaga 26903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 137; Significance: 3e-71; HSPs: 6)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 59619 - 59429
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  59619 attgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattga-aaaagtggaaatcccac 59521  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcacta 223  Q
     ||||||| |||||||||||     ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  59520 atcggatggatcacacatta-----gtaatgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaatgaagtaagcacta 59429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 63821 - 63631
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  63821 attgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattga-aaaagtggaaatcccac 63723  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcacta 223  Q
     ||||||| |||||||||||     ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  63722 atcggatggatcacacatta-----gtaatgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaatgaagtaagcacta 63631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 59183 - 59015
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||| |||||||||||||||||    
T  59183 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagag 59084  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| | ||||||||| ||||||||||||||| || ||||||||| |||||||||||||| ||||    
T  59083 agctcacataatgctttccatacaccgaaattcataattgatgcttcctgtgcttttcctctcttctcc 59015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 449 - 543
Target Start/End: Complemental strand, 63385 - 63284
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||| |||||||||||||||||    
T  63385 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagag 63286  T
Q  542 ag 543  Q
    ||    
T  63285 ag 63284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 59354 - 59291
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||  | ||||||||||||||    
T  59354 gaaagtgttttcttagtccccaagttttgctgaaaatattttggaacgcaatctagaatatttt 59291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 63556 - 63493
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||  | ||||||||||||||    
T  63556 gaaagtgttttcttagtccccaagttttgctgaaaatattttggaacgcaatctagaatatttt 63493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 1e-70; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 8330260 - 8330454
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  8330260 attgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagcatagtgtgaattgaaaaaagtgaaagtcccac 8330359  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
     ||||||| |||||||||||     |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  8330360 atcggatggatcacacatta-----gtagtgtttatatagtaggggtgtacctctaattaacgggggtacataattatgtgaacgaaataagcactagag 8330454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 29 - 226
Target Start/End: Complemental strand, 37772928 - 37772728
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaa---aaaagtggaagtccca 125  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||   |||| |||||||||||    
T  37772928 tgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaaaaaatggaagtccca 37772829  T
Q  126 cgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtac------ataattatgtgaacgaagtaagc 219  Q
    | || |||| |||||||||||     |||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||    
T  37772828 catc-gatggatcacacatta-----gtagtgtttatatagtgggggtgtacctctaattaatgggggtacataactataattatgtgaacgaagtaagc 37772735  T
Q  220 actagag 226  Q
    |||||||    
T  37772734 actagag 37772728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 8330700 - 8330868
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||    
T  8330700 gagactcaatttgagatatttttgtactatatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 8330799  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  8330800 agctcacacagtgctttccatacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 8330868  T

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Target: chr8; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 47 - 226
Target Start/End: Original strand, 25361624 - 25361797
Alignment:
Q  47 aattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacatta 146  Q
    ||||||||||  |||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  25361624 aattgagtaatggactaaacacaaattcccataatgggtagaactagtgtagtgtgaattgaaaaa-gtggaagtcccacatcggatggatcacacatta 25361722  T
Q  147 gtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    ||||| |     ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  25361723 gtagtat-----ttatatagtggggatgtacctttaattactgggggtacataattatgtgaacgaagtaagcactagag 25361797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 4237678 - 4237846
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  4237678 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 4237777  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| |||||| |||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  4237778 agctcacacagtgcattccacgcaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 4237846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 4242417 - 4242585
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  4242417 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 4242516  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| |||||| |||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  4242517 agctcacacagtgcattccacgcaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 4242585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 31449202 - 31449370
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  31449202 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 31449301  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||| || || ||||||||||| ||||    
T  31449302 agctcacacagtgcattccacacaccgaaattcacagttgatgctttctgtgtttttcctctcttctcc 31449370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 451 - 610
Target Start/End: Original strand, 43302023 - 43302189
Alignment:
Q  451 gactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctc-------acttgtgaattttctctataaatagagag 543  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       ||||||||| |||||||||||||||||||    
T  43302023 gactcaatttgagatatttttgtactaaatctaatatgagaattacttgctcccaaagtttctcacttattacttgtgaactttctctataaatagagag 43302122  T
Q  544 ctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||| ||||||||| ||||||||| |||| ||||||||| || ||||||||||| ||||    
T  43302123 ctcacacagtgcattccacacatcgaaattcacagttgatgcttcctatgtttttcctctcttctcc 43302189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 25367323 - 25367491
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||| |||||||||||||||||    
T  25367323 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgatcccaaagtttctcacttactagttgtgaactttctctataaatagag 25367422  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    || ||||||||||||||||| ||||||||||||| | || ||||||| | || ||||||||||| ||||    
T  25367423 agttcacacagtgctttccatacaccgaaattcacaattgatgcttcatgtgtttttcctctcttctcc 25367491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 37772463 - 37772296
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||       ||||| |||||||||||||||||    
T  37772463 gagactcaatttgagatatttttgtactagatctaatatgagaaa-acttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 37772365  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||||| || ||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  37772364 agctcacacagtgctttacatacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 37772296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 34818043 - 34818211
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctc-------acttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||       | ||||||| |||||||||||||||||    
T  34818043 gagactcaatttgagatgtttttgtactagatctaatatgagaattacttgctccgaaagtttctcagttattagttgtgaactttctctataaatagag 34818142  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    || |||||||||||||||   ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  34818143 agttcacacagtgctttcggtacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 34818211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 34817620 - 34817815
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattg--aaaaaagtggaagtcccac 126  Q
    |||||||||||| ||| ||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||| |||||  |||||| ||||||| | ||    
T  34817620 tgttggaacatatgtgaaaattgagtaattgattaaacacaaattcccacaatggatagaactagtgtagtgtaaattgaaaaaaaaatggaagttctac 34817719  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacg-aagtaagcactaga 225  Q
     ||||||| |||||||||||     |||||||||||||| |||| ||||||||||||||||  ||||||||||||||||||| || ||||||||||||||    
T  34817720 atcggatggatcacacatta-----gtagtgtttatatattgggagtgtacctctaattaacaggggtacataattatgtgatcgaaagtaagcactaga 34817814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 21959596 - 21959473
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||    
T  21959596 attgttggaacatatgttgaaattgagtaattgactaaacacaaattcccacaatgggtagaattaatgtagtgtgaattgaaaaaagtggaagtctcac 21959497  T
Q  127 gtcggatgaatcacacattagtag 150  Q
     ||  ||| |||||||||||||||    
T  21959496 atcaaatggatcacacattagtag 21959473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 31448747 - 31448934
Alignment:
Q  29 tgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||  |||||||||||||  ||  |||||||||||||||| ||   |||||||||||||||| |||||||||||||||||||||||||||||    
T  31448747 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcccac 31448846  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcacta 223  Q
     ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| |||||||||||||||||||||||    
T  31448847 atcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcacta 31448934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 27 - 222
Target Start/End: Original strand, 4241961 - 4242148
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||||||||||||  |||||||||||||  ||| |||||||||||||||| ||   |||||||||||||||| |||||||||| ||||||||||||||||    
T  4241961 attgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattg-aaaaagtggaagtccc 4242059  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    || ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||    
T  4242060 acatcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcact 4242148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 29 - 222
Target Start/End: Original strand, 4237224 - 4237409
Alignment:
Q  29 tgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||  |||||||||||||  ||| |||||||||||||||| ||   |||||||||||||||| |||||||||| ||||||||||||||||||    
T  4237224 tgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattg-aaaaagtggaagtcccac 4237322  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
     ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||    
T  4237323 atcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcact 4237409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 43301626 - 43301816
Alignment:
Q  29 tgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||| ||  |||||||||||||  ||  |||||||||||||||  ||   |||||||||||||||| |||||||||||||||||||||||||| ||    
T  43301626 tgttggaagatttgtggaaattgagttaaaaagactaaacacaaatttccatcttgggtagaactagtgttgtgtgaattgaaaaaagtggaagtcctac 43301725  T
Q  127 gtcggatgaatcac--acattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactag 224  Q
     ||||||| | |||  ||||||     ||||||||||||||||||||||||||||||||      | |||||||| |||| |||||||||||||||||||    
T  43301726 atcggatggaacacatacatta-----gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatctgaacgaagtaagcactag 43301814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 21384477 - 21384333
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| |||||||||||| ||  |||||    
T  21384477 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacaca 21384378  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  21384377 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 21384333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 21387897 - 21387753
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| |||||||||||| ||  |||||    
T  21387897 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacaca 21387798  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  21387797 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 21387753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 4582674 - 4582801
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||| ||||||||| ||| ||| |||||||||||| || |||| |    
T  4582674 gaattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttga 4582773  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| || ||||| ||||| ||||    
T  4582774 tgcttcctgtgtttttcttctctcctcc 4582801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 18861982 - 18862075
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  18861982 ttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 18862075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 516
Target Start/End: Complemental strand, 10933994 - 10933930
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||    
T  10933994 actcaatttaagatatttttgtactagatctaatatgtgaattacttgttaccaaagtttctcac 10933930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 516
Target Start/End: Complemental strand, 17153288 - 17153228
Alignment:
Q  456 aatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    |||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||    
T  17153288 aatttgagatatttttgtactaaatctaatatgtgaattacttgttcccaaagtttctcac 17153228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 610
Target Start/End: Original strand, 21827361 - 21827444
Alignment:
Q  527 tctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  21827361 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 21827444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 530 - 610
Target Start/End: Complemental strand, 23915161 - 23915081
Alignment:
Q  530 ctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||| ||| |||||||| ||| ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  23915161 ctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 23915081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 19393109 - 19393236
Alignment:
Q  490 gaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||||       ||||| |||||||||||||||||| |||||||| ||| ||    || |||||||||| |||| |    
T  19393109 gaattacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagatctcacacaatgcattatggaccccgaaattcacagttga 19393208  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| |||||||| ||||| ||||    
T  19393209 tgcttcctgtgcttttcttctcttctcc 19393236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 605
Target Start/End: Complemental strand, 21411756 - 21411617
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| ||| || ||||| ||| |||||    
T  21411756 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacaca 21411657  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    |||||||||| |||| ||||||| | |||||||| |||||    
T  21411656 ccgaaattcacagttgatgcttcatgtgcttttcttctct 21411617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 473 - 605
Target Start/End: Complemental strand, 21806248 - 21806109
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| ||| || ||||| ||| |||||    
T  21806248 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacaca 21806149  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    |||||||||| |||| ||||||| | |||||||| |||||    
T  21806148 ccgaaattcacagttgatgcttcatgtgcttttcttctct 21806109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 602
Target Start/End: Complemental strand, 22104391 - 22104272
Alignment:
Q  490 gaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| |||||||||||||||| |       ||||| ||||||||||||||||||||||||||| ||| |||   ||||||||||||| | || |    
T  22104391 gaattacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacatttga 22104292  T
Q  583 tgcttcctctgcttttcctc 602  Q
    || ||||| |||||||||||    
T  22104291 tgattcctgtgcttttcctc 22104272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 25367152 - 25367217
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatattttag 364  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||  | ||||||||||||||||    
T  25367152 gaaagtgttttcttagtccccaagttttgctgaaaatattttggaacgcaatctagaatattttag 25367217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 456 - 516
Target Start/End: Original strand, 17157396 - 17157456
Alignment:
Q  456 aatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    ||||||||||||||||| |||||||||||| || ||||||| || ||||||||||||||||    
T  17157396 aatttgagatatttttgaactagatctaatttgtgaattacgtgttcccaaagtttctcac 17157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 42973247 - 42973118
Alignment:
Q  86 agaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaatt 185  Q
    |||| |||||| | |||| || ||||||||||||||| ||| || |||||| ||||||| | || |  | |||||||||||||||||||||||||||||     
T  42973247 agaattagtgttgcgtgacttaaaaaaagtggaagtctcacatcagatgaaacacacat-attaat--aatgtttatatagtgggggtgtacctctaata 42973151  T
Q  186 aatgggggtacataattatgtgaacgaagtaagcact 222  Q
        |||||| |||||||||||||| |||||||||||    
T  42973150 ----ggggtatataattatgtgaactaagtaagcact 42973118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 452 - 509
Target Start/End: Complemental strand, 14036243 - 14036186
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagt 509  Q
    ||||||||||||||||||||||||||||||||| | | |||||| ||| |||||||||    
T  14036243 actcaatttgagatatttttgtactagatctaacaagtgaattatttgttcccaaagt 14036186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 530 - 599
Target Start/End: Original strand, 25733590 - 25733659
Alignment:
Q  530 ctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttc 599  Q
    ||||||||||||| |||||| ||||| ||| ||||||||||||||| |||| ||||||||| | ||||||    
T  25733590 ctataaatagagaactcacaaagtgcattctacacaccgaaattcacagttgatgcttcctgtacttttc 25733659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 4582334 - 4582374
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  4582334 taatgggggtacataattgtgtgaacgaagtaagcactaga 4582374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 8330530 - 8330593
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||  | ||| ||||||||||    
T  8330530 gaaagtgttttcttagtccccaagttttgataaaaatattttggaacgcaatcaagaatatttt 8330593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 590
Target Start/End: Original strand, 16066629 - 16066702
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcct 590  Q
    ||||||| ||||||||||||||||||||||||||| |||  |    ||||||||||||| |||| |||||||||    
T  16066629 ttgtgaagtttctctataaatagagagctcacacaatgcactatggacaccgaaattcacagttgatgcttcct 16066702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 571
Target Start/End: Complemental strand, 14036135 - 14036083
Alignment:
Q  519 gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaa 571  Q
    ||||||||| ||||||||||||||||||||| | | | |||||||||||||||    
T  14036135 gtgaattttttctataaatagagagctcacaaaattcattccacacaccgaaa 14036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 22104864 - 22104824
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  22104864 taatggaggtacataattgtgtgaacgaagtaagcactaga 22104824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 25361575 - 25361623
Alignment:
Q  26 tattgttggaacataagtggaaattgagtaactgactaaacacaaattc 74  Q
    |||||||| |||||| ||||||||||||||| |||||||||| ||||||    
T  25361575 tattgttgtaacatatgtggaaattgagtaattgactaaacaaaaattc 25361623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 4237485 - 4237547
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||||||  | ||||||||||||||    
T  4237485 gaaagtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatatttt 4237547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 4242224 - 4242286
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||||||  | ||||||||||||||    
T  4242224 gaaagtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatatttt 4242286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 37772655 - 37772592
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| |||||  ||||||||||||| |||||||||||||||||||  | || |||||||||||    
T  37772655 gaaagtgttttcctagtccccaagttctgctaaaaatattttggaacgcaatttagaatatttt 37772592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 459 - 498
Target Start/End: Complemental strand, 42972886 - 42972847
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattactt 498  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  42972886 ttgagatatttttgtacttgatctaatatgtgaattactt 42972847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 43301886 - 43301948
Alignment:
Q  311 ttagtccccaagttttgctaaaaatattttggaatacgatctagaatattttagtacatgatct 374  Q
    ||||||||||||||||||| |||||| |||||||  | |||||  |||||||||||||||||||    
T  43301886 ttagtccccaagttttgct-aaaataatttggaaggcaatctaatatattttagtacatgatct 43301948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 4582440 - 4582487
Alignment:
Q  314 gtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    |||||||||||||||||||  ||||||||||| | ||||||||||||||    
T  4582440 gtccccaagttttgctaaat-tattttggaatgcaatctagaatatttt 4582487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 3e-62; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 29 - 225
Target Start/End: Original strand, 6111615 - 6111807
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattg-aaaaaagtggaagtcccacg 127  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||| ||||||     
T  6111615 tgtttgaacatacgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattgaaaaaaaatggaaatcccaca 6111714  T
Q  128 tcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||| ||||||||     |||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  6111715 tcggatgaattacacatta-----gtagtgtttatatagtcggggtttacctataattaatgggggtacataattaagtgaacgaagtaagcactaga 6111807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 6112096 - 6112264
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||| ||| ||||| |||||||||||    
T  6112096 gagaatcaatttgagatatttttgtactagatctaatatgataattacttgctcccaaagtttctcacttattagttgggaactttctatataaatagag 6112195  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||| ||||||||||||||| |||| ||||||| | |||||||||||||| ||||    
T  6112196 agctcacacagtgcattcaacacaccgaaattcacagttgatgcttcttgtgcttttcctctcttctcc 6112264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 520 - 600
Target Start/End: Original strand, 24588593 - 24588673
Alignment:
Q  520 tgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcc 600  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||    
T  24588593 tgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctatgtttttcc 24588673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 16625132 - 16625005
Alignment:
Q  490 gaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| |    
T  16625132 gaattacttgttcccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttga 16625033  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| |||||||| ||||| ||||    
T  16625032 tgcttcctgtgcttttcttctcttctcc 16625005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 452 - 571
Target Start/End: Original strand, 2862812 - 2862938
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagc 544  Q
    ||||||||||  |||||||| |||||||||||||||| |||||||||| |||||||||| | |||       ||||||||||||||||||||||||||||    
T  2862812 actcaatttgcaatatttttatactagatctaatatgtgaattacttgttcccaaagttgcacacatactatttgtgaattttctctataaatagagagc 2862911  T
Q  545 tcacacagtgctttccacacaccgaaa 571  Q
    ||||| ||| | ||||| |||||||||    
T  2862912 tcacatagttcattccatacaccgaaa 2862938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 610
Target Start/End: Original strand, 15704258 - 15704416
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| ||||||||    
T  15704258 ttgagatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacaca 15704357  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||| ||||||||| ||||| |||| ||||||||| || ||||| ||||| ||||    
T  15704358 gtgcattctacacaccgagattcacagttgatgcttcctgtgtttttcttctcttctcc 15704416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 472 - 610
Target Start/End: Original strand, 19772372 - 19772517
Alignment:
Q  472 gtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacac 564  Q
    ||||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| |||||||||||| ||| ||||    
T  19772372 gtactagatctaatacgtgcattacttgattccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacac 19772471  T
Q  565 accgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||| |||| ||||||| | |||||||| ||||| ||||    
T  19772472 accgaaattcacagttgatgcttcatgtgcttttcttctcttctcc 19772517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 31477065 - 31477209
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  31477065 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 31477164  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    || ||||||| |||| |||||| || |||||||| ||||| ||||    
T  31477165 ccaaaattcacagttgatgctttctttgcttttcttctcttctcc 31477209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 571
Target Start/End: Original strand, 2882115 - 2882241
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagc 544  Q
    |||||||||| ||||||||| |||||||||||||||| |||||||||| ||||||| || | |||       |||||||||||||||||||||  |||||    
T  2882115 actcaatttgcgatatttttatactagatctaatatgtgaattacttgttcccaaatttgcacacatactatttgtgaattttctctataaattcagagc 2882214  T
Q  545 tcacacagtgctttccacacaccgaaa 571  Q
    ||||| ||| | ||||| |||||||||    
T  2882215 tcacatagttcattccatacaccgaaa 2882241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 22949909 - 22949821
Alignment:
Q  522 aattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  22949909 aattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 22949821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 22953865 - 22953777
Alignment:
Q  522 aattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  22953865 aattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 22953777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 23872353 - 23872265
Alignment:
Q  522 aattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  23872353 aattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 23872265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 522 - 610
Target Start/End: Complemental strand, 23876309 - 23876221
Alignment:
Q  522 aattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  23876309 aattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 23876221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 516
Target Start/End: Original strand, 28964163 - 28964227
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||| ||||||||||||||||    
T  28964163 actcaatttgagatatttttgtactagatctaatatttgaattatttgttcccaaagtttctcac 28964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 459 - 605
Target Start/End: Complemental strand, 2077559 - 2077406
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  |||||| |||||||| | | |||||||| | ||||||||||||||||       || || | || ||||||||||||| ||| ||||    
T  2077559 ttgagatatttaagtactaaatctaataggtgcattacttgtttccaaagtttctcactttttagttgtaaactatccctataaatagagaactctcaca 2077460  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    |||| ||| ||||||||||||||| |||| ||||||||| |||||||| |||||    
T  2077459 gtgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctct 2077406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 16761116 - 16760971
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctc-tataaatagagagctcacacagtgctttccacac 564  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||| |||||||||||| |||||||||||| ||| ||||    
T  16761116 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctcctataaatagagaactcacacagtgcattctacac 16761017  T
Q  565 accgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  16761016 accgaaattcacagttgatacttcctgtgcttttcttctcttctcc 16760971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 2759199 - 2759327
Alignment:
Q  88 aactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatca--cacattagtagtgtagtgtttatatagtgggggtgtacctctaatt 185  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||| ||| | ||  |||||||||||| |     ||||||| |||||||| |||||||||     
T  2759199 aactagtgtagtgtgaattgaaaaatgtgaaagtcccacatcgaatggaacatacacattagtagtat-----ttatataatgggggtgcacctctaata 2759293  T
Q  186 aatgggggtacataattatgtgaacgaagtaagcacta 223  Q
     |    ||||||||||||||||||||||||||||||||    
T  2759294 ga----ggtacataattatgtgaacgaagtaagcacta 2759327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 2881761 - 2881914
Alignment:
Q  60 actaaacacaaattctcacaatgggtagaactagtgtagtgtgaatt-gaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgt 158  Q
    |||| ||||||||||||||| | |||||||||||||| |||||||||  |||||||||||||||| || |||||||   |||||| || ||  ||||       
T  2881761 actagacacaaattctcacatttggtagaactagtgttgtgtgaattaaaaaaaagtggaagtcctacatcggatggtgcacaca-taata--gtag--- 2881854  T
Q  159 ttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactag 224  Q
     |||||||| |||||||||||||||      ||||||||||||||||||||| |||||||||||||    
T  2881855 -tatatagtaggggtgtacctctaa-----aggggtacataattatgtgaacaaagtaagcactag 2881914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 610
Target Start/End: Complemental strand, 22807098 - 22806940
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||| ||||||  ||||||||||||||| | | |||||||| | ||||||||||||| ||       || || | ||||||||||||| || ||||||||    
T  22807098 ttgatatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcatttattagttgtaaactatctctataaatagggaactcacaca 22806999  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  22806998 gtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 22806940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 224
Target Start/End: Original strand, 2862458 - 2862611
Alignment:
Q  60 actaaacacaaattctcacaatgggtagaactagtgtagtgtgaatt-gaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgt 158  Q
    |||| ||||||||||||||| | ||||||| |||||| |||||||||  |||||||||||||||| || |||||||   |||||| || ||  ||||       
T  2862458 actagacacaaattctcacatttggtagaattagtgttgtgtgaattaaaaaaaagtggaagtcctacatcggatggtgcacaca-taata--gtag--- 2862551  T
Q  159 ttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactag 224  Q
     |||||||| |||||||||||||||      ||||||||||||||||||||| |||||||||||||    
T  2862552 -tatatagtaggggtgtacctctaa-----aggggtacataattatgtgaacaaagtaagcactag 2862611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 14073817 - 14073724
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||||||| ||| ||| ||||  || |||||||||| |||| ||| ||| | |||||||||||||| ||||    
T  14073817 ttgtgaaatttctctataaatagagagctcatacaatgcattccggaccccgaaattcacagttcatgattcttgtgcttttcctctcttctcc 14073724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 6111906 - 6111969
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||  | ||||||||||||||    
T  6111906 gaaagtgttttcttagtccccaagttttgctaaaaatatttcggaacgcaatctagaatatttt 6111969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 27324422 - 27324564
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| |||||||  ||| ||| |||||    
T  27324422 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacac--tgcattctacaca 27324519  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| || ||||| ||||| ||||    
T  27324520 ccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 27324564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 85 - 223
Target Start/End: Original strand, 28963811 - 28963942
Alignment:
Q  85 tagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatg--aatcacacattagtagtgtagtgtttatatagtgggggtgtacctcta 182  Q
    |||||||| | | ||||||||| ||||||||||||||||||| | |||||  | ||||||||||     ||||||||||||||  |||||||||||||||    
T  28963811 tagaactactattgtgtgaatt-aaaaaagtggaagtcccacattggatgcaactcacacatta-----gtagtgtttatatatcgggggtgtacctcta 28963904  T
Q  183 attaatgggggtacataattatgtgaacgaagtaagcacta 223  Q
       |  ||||||||||||||| | |||||||||||||||||    
T  28963905 ---agagggggtacataattaagagaacgaagtaagcacta 28963942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 26981741 - 26981701
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  26981741 taatgggggtacataattgtgtgaacgaagtaagcactaga 26981701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 27074123 - 27074083
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  27074123 taatgggggtacataattgtgtgaacgaagtaagcactaga 27074083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 183
Target Start/End: Original strand, 29157098 - 29157221
Alignment:
Q  59 gactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaat--cacacattagtagtgtagt 156  Q
    |||| ||||||||||| || | |||||||||  ||| | |||||||||||||||| ||||||||| || | ||||| ||   |||||||||||   ||||    
T  29157098 gactgaacacaaattcccatattgggtagaataagttt-gtgtgaattgaaaaaaatggaagtcctacattggatggattagacacattagta---tagt 29157193  T
Q  157 gtttatatagtgg-gggtgtacctctaa 183  Q
    ||||||||||||| ||||||||||||||    
T  29157194 gtttatatagtggagggtgtacctctaa 29157221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 26981277 - 26981184
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||| ||||||||||||||||||||  ||| |||   || ||||||| || |||| ||||||||| |||||||| ||||| ||||    
T  26981277 ttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgcttcctgtgcttttcttctcttctcc 26981184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 27073701 - 27073574
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||| ||||||||||||||||||||  ||| |||   || ||||||| || |||| |    
T  27073701 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttga 27073602  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    || ||||| |||||||| ||||| ||||    
T  27073601 tgtttcctgtgcttttcttctcttctcc 27073574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 14074188 - 14074148
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  14074188 taatgggggtacataattgtgtgagcgaagtaagcactaga 14074148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 18387961 - 18387921
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  18387961 taatgtgggtacataattgtgtgaacgaagtaagcactaga 18387921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 563 - 602
Target Start/End: Original strand, 17281336 - 17281375
Alignment:
Q  563 acaccgaaattcatagttaatgcttcctctgcttttcctc 602  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  17281336 acaccgaaattcatagttgatgcttcctgtgcttttcctc 17281375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 223
Target Start/End: Complemental strand, 15645725 - 15645696
Alignment:
Q  194 tacataattatgtgaacgaagtaagcacta 223  Q
    ||||||||||||||||||||||||||||||    
T  15645725 tacataattatgtgaacgaagtaagcacta 15645696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 17963991 - 17964040
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  17963991 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 17964040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 18387614 - 18387521
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||| ||||||||||||||||||||| ||| ||    || || ||| ||| |||| ||| ||||| |||||||||||||| ||||    
T  18387614 ttgtgaagtttctgtataaatagagagctcacacaatgcattttggaccccaaaaatcacagttgatgattcctgtgcttttcctctcttctcc 18387521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 10585066 - 10585263
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgt 128  Q
    ||||||| |||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  10585066 tgttggagcatatgtgaaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgtagtgtgaattg-aaaaagtggaagtcccacat 10585164  T
Q  129 cggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtac------ataattatgtgaacgaagtaagcact 222  Q
    |||||| |||||||||||     |||||||||||||||||||||||||||||||||| ||||||||||      ||||||||||||||||||||||||||    
T  10585165 cggatggatcacacatta-----gtagtgtttatatagtgggggtgtacctctaattgatgggggtacataattataattatgtgaacgaagtaagcact 10585259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 3034400 - 3034232
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  3034400 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 3034301  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  3034300 agctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 3034232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 3693375 - 3693207
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  3693375 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 3693276  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  3693275 agctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 3693207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 8888687 - 8888519
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  8888687 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 8888588  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  8888587 agctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 8888519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 3673343 - 3673175
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  3673343 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 3673244  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| |||||||||| |||||||| |||| ||||||||| || ||||||||||| ||||    
T  3673243 agctcacacagtgcattccacacactgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 3673175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 8070436 - 8070268
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  8070436 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 8070337  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||| ||||| ||||||||||||| |||| ||||||||| |  ||||||||||| ||||    
T  8070336 agctcacacagtgcattccagacaccgaaattcacagttgatgcttcctgtatttttcctctcttctcc 8070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 8883927 - 8883759
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||| ||    
T  8883927 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaataaag 8883828  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  8883827 agcttacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 8883759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 10585527 - 10585695
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  10585527 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 10585626  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||||| || ||||| ||||||| |||| ||||||||| || ||||||||||| ||||    
T  10585627 agctcacacagtgctttacatacaccaaaattcacagttgatgcttcctgtgtttttcctctcttctcc 10585695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 45903882 - 45904050
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttgt-------gaattttctctataaatagag 541  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |       ||| |||||||||||||||||    
T  45903882 gagactcaatttgagatatttttgtattagatctaatatgagaattacttgctcctaaagtttctcacttattactttggaactttctctataaatagag 45903981  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||  |||||||| | ||||||||||||| |||||||| ||||| |||||||||||||| ||||    
T  45903982 agctcacaatgtgctttcaatacaccgaaattcacagttaatgtttcctgtgcttttcctctcttctcc 45904050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 28 - 213
Target Start/End: Complemental strand, 632147 - 631966
Alignment:
Q  28 ttgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacg 127  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||| |||||  ||||    
T  632147 ttgttggaacatatgtgaaaattgagtaattgactaaacacaaattttcacaatgggtaaaactagtttagtgtgaattaaaaaaagtagaagtttcacg 632048  T
Q  128 tcggatgaat--cacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaa 213  Q
    ||||||| ||  | |||||||     |||||||||||||||||||||||||||||||||| || |||||  ||||||| |||||||||    
T  632047 tcggatggatccctcacatta-----gtagtgtttatatagtgggggtgtacctctaatttat-ggggtgtataattaagtgaacgaa 631966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 27 - 222
Target Start/End: Complemental strand, 8070890 - 8070705
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||||||||||||  |||||||||||||  ||  |||||||||||||||| ||   |||||||||||||||| |||||||||||||||| ||||||||||    
T  8070890 attgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaa-tggaagtccc 8070792  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    || ||||||| | |||||||||     ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||    
T  8070791 acatcggatggaacacacatta-----gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcact 8070705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 462 - 611
Target Start/End: Original strand, 6595743 - 6595899
Alignment:
Q  462 agatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtg 554  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||       ||||||||||||||||||||||||||||||| ||||    
T  6595743 agatatttttgtactagatctaatatgtgaattacttgttcccaaagtttttcacttattagttgtgaattttctctataaatagagagctcacagagtg 6595842  T
Q  555 ctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcct 611  Q
    | ||  ||||| | |||||||||||| ||||||||| || ||||||||||| |||||    
T  6595843 cattttacacatcaaaattcatagttgatgcttcctgtgtttttcctctcttctcct 6595899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 27 - 222
Target Start/End: Complemental strand, 3673779 - 3673592
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||||||||||||  |||||||||||||  ||| |||||||||||||||| ||   |||||||||||||||| ||||||||||| |||||||||||||||    
T  3673779 attgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattga-aaaagtggaagtccc 3673681  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    || ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||    
T  3673680 acatcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcact 3673592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 3693832 - 3693646
Alignment:
Q  28 ttgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 125  Q
    ||||||||||||  |||||||||||||  ||| |||||||||||||||||||   |||||||||||| ||| ||||||||||| ||||||||||||||||    
T  3693832 ttgttggaacatgtgtggaaattgagttaaacagactaaacacaaattctcatgttgggtagaactaatgttgtgtgaattga-aaaagtggaagtccca 3693734  T
Q  126 cgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    | ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||    
T  3693733 catcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcact 3693646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 29 - 226
Target Start/End: Complemental strand, 8889128 - 8888938
Alignment:
Q  29 tgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||  ||||||| |||||  ||  |||||||||||||||| ||   ||||||||| |||||| |||||||||||||||||||||||||||||    
T  8889128 tgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattcccatgttgggtagaattagtgttgtgtgaattgaaaaaagtggaagtcccac 8889029  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
     ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||||||    
T  8889028 atcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcactagag 8888938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 87 - 226
Target Start/End: Original strand, 45903518 - 45903654
Alignment:
Q  87 gaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttatatagt-gggggtgtacctctaatt 185  Q
    ||||||||||||||||||||||||||| |||||||| ||| ||||||  |||||||||||     |||||||||||||||| ||||||||||||| ||||    
T  45903518 gaactagtgtagtgtgaattgaaaaaattggaagtctcacatcggatagatcacacatta-----gtagtgtttatatagtggggggtgtacctcaaatt 45903612  T
Q  186 aatgggggtacataattatgtgaacg-aagtaagcactagag 226  Q
    ||||||||||||||||||||||| || || ||||||||||||    
T  45903613 aatgggggtacataattatgtgatcgaaaataagcactagag 45903654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 8884384 - 8884192
Alignment:
Q  27 attgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    |||||||||||||  ||||||| |||||  ||  |||||||||||||||| ||   |||||||||||||||| |||||||||||||||| ||||||||||    
T  8884384 attgttggaacatgtgtggaaactgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaaatggaagtccc 8884285  T
Q  125 acgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactag 224  Q
    || ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||| ||||||||||||||||||    
T  8884284 acatcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgagaacgaagtaagcactag 8884194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 3034856 - 3034670
Alignment:
Q  28 ttgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 125  Q
    ||||||||||||  |||||||||||||  ||| |||||||||||||||| ||   |||||||||||||||| ||||||||||| ||||||||||||||||    
T  3034856 ttgttggaacatgtgtggaaattgagttaaacagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattga-aaaagtggaagtccca 3034758  T
Q  126 cgtcggat-gaat-cacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    | |||||| |||| |||||||||     ||||||||||||||||||||||||||||||||  ||    |||| ||| ||||||||||||||||||||||    
T  3034757 catcggatggaatacacacatta-----gtagtgtttatatagtgggggtgtacctctaa--aa----ggtatatagttatgtgaacgaagtaagcact 3034670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 9706952 - 9707096
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  9706952 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 9707051  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  9707052 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 9707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 16749281 - 16749425
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  16749281 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 16749380  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  16749381 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 16749425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 473 - 610
Target Start/End: Complemental strand, 19776618 - 19776474
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  19776618 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 19776519  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  19776518 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 19776474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 45903237 - 45903306
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgt 96  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  45903237 attgttggaacatatgtggaaattgagtaattgactaaacacaaattcccacaatgggtagaactagtgt 45903306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 452 - 555
Target Start/End: Original strand, 12899083 - 12899193
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcact-------tgtgaattttctctataaatagagagc 544  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||       |||||||||||||||||||||  |||     
T  12899083 actcaatttgagatatttttgtactaaatctaatatgtgaattacttgttcccaaagtttctcacttattagctgtgaattttctctataaataatgaga 12899182  T
Q  545 tcacacagtgc 555  Q
    ||||| |||||    
T  12899183 tcacatagtgc 12899193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 571
Target Start/End: Complemental strand, 429184 - 429057
Alignment:
Q  451 gactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctca-------cttgtgaattttctctataaatagagag 543  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||||  |  ||||||| || |       ||||||||||||||||||||||| ||||    
T  429184 gactcaatttgagatatttctgtagtagatctaatatgtgaattacttattgtcaaagttacttatatattacttgtgaattttctctataaataaagag 429085  T
Q  544 ctcacacagtgctttccacacaccgaaa 571  Q
    |||||| ||| | |||||||||||||||    
T  429084 ctcacaaagttcattccacacaccgaaa 429057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 8223651 - 8223524
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||| ||||||||| ||| |||   || |||||||||| |||| |    
T  8223651 gaattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggaccccgaaattcacagttga 8223552  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| |||||||||||||| ||||    
T  8223551 tgcttcctgtgcttttcctctcttctcc 8223524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 456 - 540
Target Start/End: Complemental strand, 16023282 - 16023191
Alignment:
Q  456 aatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaataga 540  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||       ||||||||||||||||||||||||    
T  16023282 aatttgagatattgttgtactagatctaatatgtgaattacttgttcccaaagtttgtcacatattagttgtgaattttctctataaataga 16023191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 610
Target Start/End: Original strand, 18699200 - 18699283
Alignment:
Q  527 tctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||||| | || ||||||||| |||||||| ||||| ||||    
T  18699200 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacacttgatgcttcctgtgcttttcttctcttctcc 18699283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 459 - 588
Target Start/End: Original strand, 22758527 - 22758663
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||| | ||||| ||||||||||       || || | |||||||||||||||| ||||||||    
T  22758527 ttgagatatttaagtactagatctaataggtgcattacttgtttccaaaatttctcacttattagttgtaaactatctctataaatagagaactcacaca 22758626  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttc 588  Q
    |||| ||| ||||||||||||||| |||| |||||||    
T  22758627 gtgcattctacacaccgaaattcacagttgatgcttc 22758663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 4106738 - 4106831
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||| ||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  4106738 ttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 4106831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 4110590 - 4110683
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||| ||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  4110590 ttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 4110683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 15965737 - 15965644
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||| ||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  15965737 ttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 15965644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 15969661 - 15969568
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||| ||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  15969661 ttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 15969568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 15973585 - 15973492
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||| ||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  15973585 ttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 15973492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 18350153 - 18350280
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||| ||| ||||||||||||||||| ||||||||| ||| ||| |||||||||||| || |||| |    
T  18350153 gaattacttgttcccaaagtttctcacctattagttgcgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttga 18350252  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| || ||||| ||||| ||||    
T  18350253 tgcttcctgtgtttttcttctcttctcc 18350280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 10585335 - 10585398
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  10585335 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 10585398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 603
Target Start/End: Complemental strand, 8197168 - 8197048
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||| ||||||||| ||| ||    || |||||||||| |||| |    
T  8197168 gaattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattatggaccccgaaattcacagttga 8197069  T
Q  583 tgcttcctctgcttttcctct 603  Q
    |||||||| ||||||||||||    
T  8197068 tgcttcctgtgcttttcctct 8197048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 37438921 - 37439065
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||| | ||| ||||     
T  37438921 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacg 37439020  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| || |||| | |||||||| ||||| ||||    
T  37439021 ccgaaattcacagttgatacttcatgtgcttttcttctcttctcc 37439065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 29944 - 29817
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||| ||||||||||||| ||||||||| ||| |||   ||||||||||||| || | |    
T  29944 gaattacttgttcccaaagtttctcacctattagttgtgaaatttttctataaatagagggctcacacaatgcattcaggacaccgaaattcacagatga 29845  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    || ||||| |||||||||||||| ||||    
T  29844 tgattcctgtgcttttcctctcttctcc 29817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 602
Target Start/End: Original strand, 14425221 - 14425340
Alignment:
Q  490 gaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| |||||||||||||||| |       ||||| |||||||| |||||||||||||||||| ||| |||   ||||||||||||| |||| |    
T  14425221 gaattacttgttcccaaagtttctcacctattagctgtgaagtttctctagaaatagagagctcacacaatgcattctgtacaccgaaattcacagttga 14425320  T
Q  583 tgcttcctctgcttttcctc 602  Q
    || ||||| |||||||||||    
T  14425321 tgattcctgtgcttttcctc 14425340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 8488752 - 8488895
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| |||||||||| | ||| |||||    
T  8488752 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagt-cattctacaca 8488850  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||| | | |||| ||||||||| |||||||| ||||| ||||    
T  8488851 ccgaaagttacagttgatgcttcctgtgcttttcttctcttctcc 8488895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 452 - 498
Target Start/End: Original strand, 47540832 - 47540878
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattactt 498  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||    
T  47540832 actcaatttgagatatttttgtactagatctaatatgtaaattactt 47540878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 30411 - 30371
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  30411 taatgggggtacataattgtgtgaacgaagtaagcactaga 30371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 18349686 - 18349726
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  18349686 taatgggggtacataattgtgtgaacgaagtaagcactaga 18349726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 631891 - 631829
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||  ||||||||    
T  631891 gaaagtgttttcttagtccccaagttttgct-aaaatattttggaatacaatctgaaatatttt 631829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 35455798 - 35455861
Alignment:
Q  59 gactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtc 122  Q
    ||||||||||||||||  |   |||||||||||||||| |||| ||||||||||||||||||||    
T  35455798 gactaaacacaaattcatatgttgggtagaactagtgttgtgtaaattgaaaaaagtggaagtc 35455861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 610
Target Start/End: Complemental strand, 14672048 - 14671982
Alignment:
Q  544 ctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| ||| ||| ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  14672048 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 14671982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 517 - 567
Target Start/End: Original strand, 35456351 - 35456401
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacacc 567  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||||||||    
T  35456351 ttgtgaattttctctataaatagagaattcacatagtgcattccacacacc 35456401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 498
Target Start/End: Original strand, 47541248 - 47541294
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattactt 498  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||    
T  47541248 actcaatttgagatatttttgtactagatataatttgtgaattactt 47541294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 494
Target Start/End: Original strand, 53502476 - 53502518
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaatt 494  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  53502476 actcaatttgagatatttttgtactatatctaatatgtgaatt 53502518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 18472669 - 18472620
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||||||||||||| || ||||||||||| ||||    
T  18472669 acacaccgaaattcacagttaatgcttcctgtgtttttcctctcttctcc 18472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 51923016 - 51922923
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||| ||||||||| ||| |||   ||||||||||||| |||| ||| ||||  ||| |||| ||||| ||||    
T  51923016 ttgtgaagtttctctataaatagagggctcacacaatgcattctggacaccgaaattcacagttgatgattcccgtgcctttcttctcttctcc 51922923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 6595464 - 6595496
Alignment:
Q  189 gggggtacataattatgtgaacgaagtaagcac 221  Q
    |||||||||||||||||||||||||||||||||    
T  6595464 gggggtacataattatgtgaacgaagtaagcac 6595496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 8197633 - 8197593
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  8197633 taatgggggtacataagtgtgtgaacgaagtaagcactaga 8197593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 8224118 - 8224078
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  8224118 taatgggggtacataagtgtgtgaacgaagtaagcactaga 8224078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 16055920 - 16055864
Alignment:
Q  462 agatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt 518  Q
    ||||||||||||||||||||||||| | || ||||||| ||| ||||||| ||||||    
T  16055920 agatatttttgtactagatctaatacgtgagttacttgttcctaaagtttttcactt 16055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 3034593 - 3034531
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||||||  | ||||||||||||||    
T  3034593 gaaagtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatatttt 3034531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 3693569 - 3693507
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||||||  | ||||||||||||||    
T  3693569 gaaagtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatatttt 3693507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 8888880 - 8888818
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||||||  | ||||||||||||||    
T  8888880 gaaagtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatatttt 8888818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 548
Target Start/End: Original strand, 11997418 - 11997449
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcac 548  Q
    ||||||||||||||||||||||||||||||||    
T  11997418 ttgtgaattttctctataaatagagagctcac 11997449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 51923387 - 51923348
Alignment:
Q  186 aatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  51923387 aatgggggtagataattgtgtgaacgaagtaagcactaga 51923348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 18467875 - 18467826
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  18467875 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 18467826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 32473456 - 32473505
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  32473456 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 32473505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 39775160 - 39775209
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  39775160 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 39775209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 518
Target Start/End: Complemental strand, 16043245 - 16043189
Alignment:
Q  462 agatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt 518  Q
    ||||||||||||| ||||||||| ||| || ||| ||| ||||||||||| ||||||    
T  16043245 agatatttttgtattagatctaacatgtgatttaattgttcccaaagtttttcactt 16043189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 2e-60; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 41097295 - 41097463
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  41097295 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 41097394  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| | |||||||||||||| ||||    
T  41097395 agctcacacagtgctttccacacaccgaaattcacagttgatgcttcatgtgcttttcctctcttctcc 41097463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 28 - 225
Target Start/End: Complemental strand, 33055992 - 33055800
Alignment:
Q  28 ttgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacg 127  Q
    ||||||||||||| ||| |||||| |||| ||||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||     
T  33055992 ttgttggaacatatgtgaaaattgtgtaattgactaagcacaaattcccacaatgggtagacctagtgcagtgtgaattgaaaaaaatggaagtcccaca 33055893  T
Q  128 tcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||||| ||||||||||||||     ||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||    
T  33055892 tcggatggatcacacattagta-----gtgtttatatagtggaggtgtacctgtaattaatggggatacataattaagtgaacgaattaagcactaga 33055800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 40232322 - 40232465
Alignment:
Q  79 aatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacc 178  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||  |||||||||||||||||||||||||||    
T  40232322 aatgggtagaactaatgtagtgtgaattgaaaaaagtggaagtcccacatcggatggatcacacatt--ta--gtagtgtttatatagtgggggtgtacc 40232417  T
Q  179 tctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||    
T  40232418 tgtaattaatgggggtacataattatgtgaacgaagtaagcactagag 40232465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 455 - 610
Target Start/End: Original strand, 40232731 - 40232893
Alignment:
Q  455 caatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctca 547  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||    
T  40232731 caatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctca 40232830  T
Q  548 cacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| ||||||||||||||||||| |||| ||||||||| | |||||||||||| ||||    
T  40232831 cacagtgcattccacacaccgaaattcacagttgatgcttcctgtacttttcctctcttctcc 40232893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 3094846 - 3094678
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  3094846 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 3094747  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    || ||||||||||| ||||||||||||||||||| |||| || |||||| || ||||||||||| ||||    
T  3094746 agttcacacagtgcattccacacaccgaaattcacagttgatacttcctgtgtttttcctctcttctcc 3094678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 41096835 - 41097031
Alignment:
Q  29 tgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgt 128  Q
    |||||||||||| || |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||| |||||| |||||||||||| |    
T  41096835 tgttggaacatatgtagaaattgagtaattgactaaacacaaatttccacaatgggtagaactagtgtagtgtgaatt-aaaaaaatggaagtcccacat 41096933  T
Q  129 cggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtac------ataattatgtgaacgaagtaagcact 222  Q
    |  ||| |||||||||||      ||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||    
T  41096934 c-catggatcacacatta-----ttagtgtttatatagtgggggtgtacctctaattaatgggggtacataattataattatgtgaacgaagtaagcact 41097027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 610
Target Start/End: Original strand, 17213787 - 17213949
Alignment:
Q  455 caatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctca 547  Q
    |||||||||||||||||||| |||| |||||||| |||||||||| ||||||||||||||||||       ||||| |||||||||||||||||||||||    
T  17213787 caatttgagatatttttgtattagaactaatatgtgaattacttgttcccaaagtttctcacttattagttgtgaactttctctataaatagagagctca 17213886  T
Q  548 cacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||| | ||| | ||||||||||| |||||| ||| ||||| || ||||||||||| ||||    
T  17213887 cacagtacattcgatacaccgaaatttatagttgatgtttcctatgtttttcctctcttctcc 17213949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 459 - 610
Target Start/End: Original strand, 16836641 - 16836791
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttgtgaattttctctataaatagagagctcacacagtgcttt 558  Q
    |||||||||||||||| || |||||||||| || ||||||| |  |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||    
T  16836641 ttgagatatttttgtattatatctaatatgtgagttacttgttttcaaagtttctta-ttgtgaattttctctataaatagagagctcacacagtgcatt 16836739  T
Q  559 ccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |   ||||||||||||| |||| ||||||| | |||||||||||||| ||||    
T  16836740 ctggacaccgaaattcacagttgatgcttcatgtgcttttcctctcttctcc 16836791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 460 - 605
Target Start/End: Complemental strand, 13894062 - 13893910
Alignment:
Q  460 tgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacag 552  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||       ||||||||||||||||||||||||| |||||||     
T  13894062 tgagatgtttttgtactagatctaatatgtgaattacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagttcacacaa 13893963  T
Q  553 tgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctct 605  Q
    ||| ||| |||||| |||| ||| |||| ||||||||| || |||||||||||    
T  13893962 tgcattctacacactgaaaatcacagttgatgcttcctgtgtttttcctctct 13893910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 26 - 225
Target Start/End: Complemental strand, 13894465 - 13894268
Alignment:
Q  26 tattgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaa-ctagtgtagtgtgaattgaaaaaagtggaagtccc 124  Q
    ||||||||||||||   |||||||||||||| || || |||| ||||||  | ||||| ||||| |||| |||| ||||| ||||||||||| |||| ||    
T  13894465 tattgttggaacatgcatggaaattgagtaattgtctgaacataaattccaataatggatagaaactagggtagagtgaaatgaaaaaagtgaaagttcc 13894366  T
Q  125 acgtcggatgaatc--acacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    || ||||||| |||  ||||||||      ||||||||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  13894365 acatcggatggatcctacacatta-----atagtgtttatatagtaggggcgtatctctaattaatcggggtacataattatgtgaacgaagtaagcact 13894271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 3095301 - 3095115
Alignment:
Q  28 ttgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 125  Q
    ||||||||||||  |||||||||||||  |||  ||||||||||||||  ||   |||||||||||||||| ||||||||||| ||||||||||||||||    
T  3095301 ttgttggaacatgtgtggaaattgagttaaacaaactaaacacaaatttccatgttgggtagaactagtgttgtgtgaattga-aaaagtggaagtccca 3095203  T
Q  126 cgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    | ||||||||| ||||||  | ||  |||||||||||||||||||||||||||| |||      | |||||||| |||||||||| |||||||||||    
T  3095202 catcggatgaaacacaca-catta--gtagtgtttatatagtgggggtgtacctttaa------gaggtacatagttatgtgaacaaagtaagcact 3095115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 449 - 545
Target Start/End: Original strand, 8267189 - 8267292
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||       ||||||| |||||||||||||||||    
T  8267189 gagactcaattttagatatttttgtactagatctaatatgagaattacttgctcacaaagtttatcacttattagttgtgaactttctctataaatagag 8267288  T
Q  542 agct 545  Q
    ||||    
T  8267289 agct 8267292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 459 - 610
Target Start/End: Complemental strand, 1067228 - 1067070
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||| ||||||||||||||||| ||||||| || ||| ||||||||||||||       |||||||||||||||||||||||| ||||||||    
T  1067228 ttgagatattttggtactagatctaatatgtgaattacgtgttcctaaagtttctcacttattagttgtgaattttctctataaatagagaactcacaca 1067129  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
     ||| ||    ||| ||||||||| |||| ||||||||| || ||||||||||| ||||    
T  1067128 ttgcattatggacaacgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 1067070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 610
Target Start/End: Original strand, 19725253 - 19725409
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttgtgaat-----tttctctataaatagagagctcacacagt 553  Q
    ||||||||||||||||||| |||| ||||  |||||||||||||||||||||||||| || | | |     ||||||||||||||||||| ||||||| |    
T  19725253 ttgagatatttttgtactatatctgatatttgaattacttgctcccaaagtttctcatttattagttgtgatttctctataaatagagagttcacacatt 19725352  T
Q  554 gctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    || |||    |||||||||||| |||| ||||||||| ||||||||| |||| ||||    
T  19725353 gcattctgggcaccgaaattcacagttgatgcttcctgtgcttttcccctcttctcc 19725409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 39243384 - 39243528
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||| | | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  39243384 tactagatctaacaggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 39243483  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  39243484 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 39243528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 39246939 - 39247083
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||| | | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  39246939 tactagatctaacaggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 39247038  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  39247039 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 39247083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 518 - 610
Target Start/End: Complemental strand, 26199039 - 26198947
Alignment:
Q  518 tgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||| ||||||||||||||||||||||||||| ||| |||   ||||||||||||| |||| ||||||||| |||||||||||||| ||||    
T  26199039 tgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 26198947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 1924466 - 1924559
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  1924466 ttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 1924559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 14804220 - 14804093
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| |||||||||||||||||||||||| || ||| ||| | || |||||||||| |||| |    
T  14804220 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacgcaatgcattctagaccccgaaattcacagttga 14804121  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    || ||||| |||||||||||||| ||||    
T  14804120 tgattcctgtgcttttcctctcttctcc 14804093  T

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Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 20923480 - 20923573
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  20923480 ttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 20923573  T

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Target: chr1; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 19724937 - 19724999
Alignment:
Q  163 atagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||||||    
T  19724937 atagtgggggtgtatctttaattaatgagggtacataattgtgtgaacgaagtaagcactaga 19724999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 452 - 549
Target Start/End: Original strand, 27308228 - 27308332
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctc-------acttgtgaattttctctataaatagagagc 544  Q
    |||||||||||||| |||||||||||||||||||||| |||||| ||| || |||||||||||       | | ||||||||||||||||||||||| ||    
T  27308228 actcaatttgagatgtttttgtactagatctaatatgtgaattatttgttctcaaagtttctcttatattagtagtgaattttctctataaatagagtgc 27308327  T
Q  545 tcaca 549  Q
    |||||    
T  27308328 tcaca 27308332  T

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Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 41387336 - 41387480
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  41387336 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 41387435  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| |||| || | || ||||| ||||| ||||    
T  41387436 ccgaaattcacagttgatgcatcatgtgtttttcttctcttctcc 41387480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 490 - 598
Target Start/End: Complemental strand, 21498367 - 21498252
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||| ||| ||||||||||||||||| ||||||||| ||| ||| |||||||||||| || |||| |    
T  21498367 gaattacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttga 21498268  T
Q  583 tgcttcctctgctttt 598  Q
    |||||||| |||||||    
T  21498267 tgcttcctgtgctttt 21498252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 491 - 610
Target Start/End: Original strand, 22428575 - 22428700
Alignment:
Q  491 aattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaat 583  Q
    ||||||||| ||||||||||||||||||       ||||| ||||||||||||||||||||||||||| ||| |||   || |||||||||| |||| ||    
T  22428575 aattacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggac-ccgaaattcacagttgat 22428673  T
Q  584 gcttcctctgcttttcctctctgctcc 610  Q
    | ||||| |||||||||||||| ||||    
T  22428674 gattcctgtgcttttcctctcttctcc 22428700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 41097103 - 41097166
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  41097103 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 41097166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 14819688 - 14819561
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||||||||||||| ||| ||| | || |||||||||| |||| |    
T  14819688 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctagaccccgaaattcacagttga 14819589  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    || ||| | | |||||| ||||| ||||    
T  14819588 tgattcttgtacttttcttctcttctcc 14819561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 526 - 610
Target Start/End: Complemental strand, 2367716 - 2367632
Alignment:
Q  526 ttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||||||||||||| ||| |||   |||| |||||||| |||| ||||||||| |||||||| ||||| ||||    
T  2367716 ttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatgcttcctgtgcttttcttctcttctcc 2367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 526 - 610
Target Start/End: Original strand, 2384667 - 2384751
Alignment:
Q  526 ttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||||||||||||| ||| |||   |||| |||||||| |||| ||||||||| |||||||| ||||| ||||    
T  2384667 ttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatgcttcctgtgcttttcttctcttctcc 2384751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 14204483 - 14204546
Alignment:
Q  62 taaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 125  Q
    |||||||||||||| |   ||||| |||||||||| ||||||||||||||||||||||||||||    
T  14204483 taaacacaaattcttatgttgggtggaactagtgttgtgtgaattgaaaaaagtggaagtccca 14204546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 1067499 - 1067441
Alignment:
Q  164 tagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    |||||||  ||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  1067499 tagtgggaatgtacctctaattaatgaggatacataattatgtgagcgaagtaagcact 1067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 33055718 - 33055625
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||| | ||||| ||||||| |||| ||| ||| | || ||||| ||||| ||||    
T  33055718 ttgtgaactttctctataaatagagagttcacacagtgcattctatacaccaaaattcacagttgatgattcttgtgtttttcttctcttctcc 33055625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 52100600 - 52100726
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||| ||||| ||| ||| ||| |||||||||||  || |||| |    
T  52100600 gaattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcatacaatgcattcaacacaccgaaa-acacagttga 52100698  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    || ||||| || ||||||||||| ||||    
T  52100699 tgattcctgtgtttttcctctcttctcc 52100726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 14813612 - 14813572
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  14813612 taatgggggtacataattgtgtgaacgaagtaagcactaga 14813572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 459 - 515
Target Start/End: Complemental strand, 19727112 - 19727056
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctca 515  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||| |||| |||||||    
T  19727112 ttgagatgtttttgtactagatctgatatgtgaattacttgctctcaaaatttctca 19727056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 21498833 - 21498793
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  21498833 taatgggggtacataattgtgtgaacgaagtaagcactaga 21498793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 52100147 - 52100187
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  52100147 taatgggggtacataattgtgtgaacgaagtaagcactaga 52100187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 2368099 - 2368060
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactag 224  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  2368099 taatgggggtacataattgtgtgaacgaagtaagcactag 2368060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 2384283 - 2384322
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactag 224  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  2384283 taatgggggtacataattgtgtgaacgaagtaagcactag 2384322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 17213178 - 17213242
Alignment:
Q  152 gtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcact 222  Q
    |||||||||||||||  ||||||||||||||||     ||||||||||||||||| |||||||||||||||    
T  17213178 gtagtgtttatatag--ggggtgtacctctaata----ggggtacataattatgtaaacgaagtaagcact 17213242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 27307355 - 27307450
Alignment:
Q  27 attgttggaacataagtggaaattgag-taactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcc 123  Q
    |||| ||||||||  ||||| |||||| |||  |||||||||||||||| |||| ||| |||| |||||   ||||||||||||||||||||||||||    
T  27307355 attgctggaacatgtgtggatattgaggtaaaagactaaacacaaattcccacattggatagacctagtt--gtgtgaattgaaaaaagtggaagtcc 27307450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 22428235 - 22428275
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  22428235 taatgggggtacataattgtgtgaactaagtaagcactaga 22428275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 451 - 566
Target Start/End: Original strand, 23254526 - 23254648
Alignment:
Q  451 gactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagag 543  Q
    |||||||||| |||||||||||||| |||| ||||||  || ||||||| | | ||| ||||||||       || | ||||||||||||||||||||||    
T  23254526 gactcaatttaagatatttttgtaccagatttaatatttgatttacttgtttctaaaatttctcacatattaattataaattttctctataaatagagag 23254625  T
Q  544 ctcacacagtgctttccacacac 566  Q
    | |||| ||||| ||| ||||||    
T  23254626 cacacaaagtgcattctacacac 23254648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 3095039 - 3094977
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||| |||||| |||||||  | ||||||||||||||    
T  3095039 gaaagtgttttcttagtccccaagttttgct-aaaataatttggaacgcaatctagaatatttt 3094977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 17213084 - 17213151
Alignment:
Q  83 ggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcgga-tgaatcacacattagta 149  Q
    |||||||| ||||| |||||||||||||||||| ||||| |||| |||||  |||||| |||||||||    
T  17213084 ggtagaacaagtgttgtgtgaattgaaaaaagttgaagttccacatcggagggaatcaaacattagta 17213151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 183
Target Start/End: Original strand, 23254149 - 23254243
Alignment:
Q  88 aactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaa 183  Q
    ||||||| | |||||||||||||| |||||||||||||  | ||||  ||||||||  | |||| || ||||||||||||||| |||||| |||||    
T  23254149 aactagtcttgtgtgaattgaaaagagtggaagtcccaaattggatagatcacaca-cattagtataatgtttatatagtgggtgtgtacttctaa 23254243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Original strand, 26927153 - 26927202
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| || ||||||||||| ||||    
T  26927153 acacaccgaaattcacagttgatgcttcctgtgtttttcctctcttctcc 26927202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 193 - 221
Target Start/End: Original strand, 8273196 - 8273224
Alignment:
Q  193 gtacataattatgtgaacgaagtaagcac 221  Q
    |||||||||||||||||||||||||||||    
T  8273196 gtacataattatgtgaacgaagtaagcac 8273224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 106; Significance: 1e-52; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 27 - 226
Target Start/End: Original strand, 48840 - 49036
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||| ||||||||||||||  |||||||| |||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48840 attgttggaacatatgtggaaattgagtacttgactaaatacaaatttccacaatgggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 48939  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtac------ataattatgtgaacgaagtaagca 220  Q
     ||||||| |||||||||||     |||||||||||    |||||||||| |||||||||||||||||||      ||||||||||||||||||||||||    
T  48940 atcggatggatcacacatta-----gtagtgtttat----tgggggtgtatctctaattaatgggggtacataattataattatgtgaacgaagtaagca 49030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 49321 - 49489
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  49321 gagactcaatttgagatatttttgtactagatttaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 49420  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    | |||||||||||||||| | ||||||||||||| |||| | ||||||| || ||||||||||| ||||    
T  49421 aactcacacagtgctttcaatacaccgaaattcacagttgacgcttcctgtgtttttcctctcttctcc 49489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 49108 - 49171
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| |||||| |||||||||||||||| ||||||||||  | ||||||||||||||    
T  49108 gaaagtgttttcttagtctccaagttttgctaaaagtattttggaacgcaatctagaatatttt 49171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 106; Significance: 1e-52; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 149794 - 149598
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||| ||||||||||||||  |||||||| |||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  149794 attgttggaacatatgtggaaattgagtacttgactaaatacaaatttccacaatgggaagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 149695  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtac------ataattatgtgaacgaagtaagca 220  Q
     ||||||| ||||||||||||||     ||||||||    |||||||||| |||||||||||||||||||      ||||||||||||||||||||||||    
T  149694 atcggatggatcacacattagta-----gtgtttat----tgggggtgtatctctaattaatgggggtacataattataattatgtgaacgaagtaagca 149604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 449 - 610
Target Start/End: Complemental strand, 149313 - 149145
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||||    
T  149313 gagactcaatttgagatatttttgtactagatttaatatgagaattacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagag 149214  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    | |||||||||||||||| | ||||||||||||| |||| | ||||||| || ||||||||||| ||||    
T  149213 aactcacacagtgctttcaatacaccgaaattcacagttgacgcttcctgtgtttttcctctcttctcc 149145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 149526 - 149463
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| |||||| |||||||||||||||| ||||||||||  | ||||||||||||||    
T  149526 gaaagtgttttcttagtctccaagttttgctaaaagtattttggaacgcaatctagaatatttt 149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 47 - 226
Target Start/End: Complemental strand, 8106 - 7933
Alignment:
Q  47 aattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacatta 146  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||    
T  8106 aattgagtaattgactaaacacaaattcccataatgggtagaactagtgtagtgagaattga-aaaagtggaagtcccacatcggatggatcacacatta 8008  T
Q  147 gtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
         || || |||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  8007 -----gtggtatttatatagtggggatgtacctttaattactgggggtacataattatgtgaacgaagtaagcacaagag 7933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 8155 - 8107
Alignment:
Q  26 tattgttggaacataagtggaaattgagtaactgactaaacacaaattc 74  Q
    |||||||| |||||| ||||||||||||||| |||||||||| ||||||    
T  8155 tattgttgtaacatatgtggaaattgagtaattgactaaacaaaaattc 8107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 104; Significance: 2e-51; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 9217 - 9386
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||| |||||||||||||||||    
T  9217 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagag 9316  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctg-cttttcctctctgctcc 610  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||| ||  ||||||||||| ||||    
T  9317 agctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgttttttcctctcttctcc 9386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 29 - 226
Target Start/End: Original strand, 8764 - 8954
Alignment:
Q  29 tgttggaacataagtggaaattgagt--aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||  |||||||||||||  ||  |||||||||||||||| ||   |||||||||||||||| |||||||||||||||||||||| ||||||    
T  8764 tgttggaacatgtgtggaaattgagttaaaaagactaaacacaaattcccatgttgggtagaactagtgttgtgtgaattgaaaaaagtggaaatcccac 8863  T
Q  127 gtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
     ||||||| | ||||||  | ||  ||||||||||||||||||||||||||||||||      | |||||||| ||||||||||||||||||||||||||    
T  8864 atcggatggaacacaca-catta--gtagtgtttatatagtgggggtgtacctctaa------gaggtacatagttatgtgaacgaagtaagcactagag 8954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 9024 - 9087
Alignment:
Q  299 gaaagggttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  9024 gaaagtgttttcttagtccccaagttttgctaaaaatattttggaacgcaatctagaatatttt 9087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 99; Significance: 1e-48; HSPs: 4)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 449 - 610
Target Start/End: Original strand, 577 - 745
Alignment:
Q  449 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||| |||||||| | ||||||    
T  577 gagactcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcacttattagttatgaactttctctacatatagag 676  T
Q  542 agctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||||| | ||||||||||||| |||| ||||||||| | |||||||||||| ||||    
T  677 agctcacacagtgctttcaatacaccgaaattcacagttgatgcttcctgtacttttcctctcttctcc 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 281 - 334
Alignment:
Q  172 gtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcactagag 226  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  281 gtgtacctttaattaatgggg-tacataattatgtgaacgaagtaagcactagag 334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 362
Target Start/End: Original strand, 412 - 469
Alignment:
Q  305 gttttattagtccccaagttttgctaaaaatattttggaatacgatctagaatatttt 362  Q
    ||||| |||||||| |||||||||||||||||||||||||  | || |||||||||||    
T  412 gttttcttagtccctaagttttgctaaaaatattttggaacgcaatatagaatatttt 469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 376
Target Start/End: Original strand, 462 - 505
Alignment:
Q  333 aatattttggaatacgatctagaatattttagtacatgatctga 376  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||    
T  462 aatattttggaatgcaatctaaaatattttagtacatgatctga 505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 80; Significance: 3e-37; HSPs: 4)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 213252 - 213375
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccac 126  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||    
T  213252 attgttggaacatatgttgaaattgagtaattgactaaacacaaattcccacaatgggtagaattaatgtagtgtgaattgaaaaaagtggaagtctcac 213351  T
Q  127 gtcggatgaatcacacattagtag 150  Q
     ||  ||| |||||||||||||||    
T  213352 atcaaatggatcacacattagtag 213375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 193645 - 193772
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||| ||||||||| ||| |||   ||||||||||||| |||| |    
T  193645 gaattacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaggacaccgaaattcacagttga 193744  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| |||||||||||||| ||||    
T  193745 tgcttcctgtgcttttcctctcttctcc 193772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 192658 - 192698
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  192658 taatgggggtacataattgtgtgaacgaagtaagcactaga 192698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 187993 - 188086
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| |||||||||||||| || | ||||||| ||| |||   || ||||||| || |||| ||||||||| |||||||| ||||| ||||    
T  187993 ttgtgaagtttctctataaatatagggttcacacaatgcattcaggaccccgaaatacacagttgatgcttcctgtgcttttcttctcttctcc 188086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 84066 - 83929
Alignment:
Q  81 tgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctc 180  Q
    |||||||||||||||| |||||||||||||| |||| |||||| || | | ||| | ||||||  | ||||  |||||||||||||||| |||||||||     
T  84066 tgggtagaactagtgttgtgtgaattgaaaagagtgaaagtcctacattgaatggaacacacac-attagt--agtgtttatatagtggaggtgtacctg 83970  T
Q  181 taattaatgggggtacataattatgtgaacgaagtaagcac 221  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  83969 taattaatgggggtacataattaagtgaacgaagtaagcac 83929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 459 - 610
Target Start/End: Complemental strand, 121313 - 121155
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| ||||||||    
T  121313 ttgagatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacaca 121214  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||| ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  121213 gtgcattctacacaccgaaattcacagttgatgcttcctatgcttttcttctcttctcc 121155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 61; Significance: 7e-26; HSPs: 3)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 459 - 610
Target Start/End: Complemental strand, 7135 - 6977
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||| | ||||||||||| ||||       || || | |||||||||||||||| ||||||||    
T  7135 ttgagatatttaagtactagatctaataggtgcattacttgtttccaaagtttctaacttattagttgtaaactatctctataaatagagaactcacaca 7036  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||| |||||||||||||||||||| ||||||| | |||||||||||||| ||||    
T  7035 gtgcattctacacaccgaaattcatagttgatgcttcatgtgcttttcctctcttctcc 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 27 - 223
Target Start/End: Complemental strand, 7647 - 7457
Alignment:
Q  27 attgttggaacataagtggaaattgagtaactg-actaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 125  Q
    |||||||||||||  ||||||||||||| |  | |  ||||||||||||||    | |||||||||||| | ||||||||| ||||||||||||||||||    
T  7647 attgttggaacatgtgtggaaattgagttaaagtaggaaacacaaattctcttgtttggtagaactagtattgtgtgaatttaaaaaagtggaagtccca 7548  T
Q  126 cgtcggatgaatcacacattagtagtgtagtgtttatatagtgggggtgtacctctaattaatgggggtacataattatgtgaacgaagtaagcacta 223  Q
    | ||||||| | ||||||  | ||  | ||||||||||| |||||| ||||||||    |||  ||||||||||||||||||||||||||||||||||    
T  7547 catcggatggaacacaca-caata--gaagtgtttatatcgtggggttgtacctc----taacaggggtacataattatgtgaacgaagtaagcacta 7457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 5879 - 5779
Alignment:
Q  27 attgttggaacataagtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtccca 125  Q
    |||||||||||||  ||||||||||||| ||   |||||||||||||||||| | | |||||||||||||| |||||||||||||||| || ||||||||    
T  5879 attgttggaacatgtgtggaaattgagttaaaatactaaacacaaattctcatatttggtagaactagtgttgtgtgaattgaaaaaaatgaaagtccca 5780  T
Q  126 c 126  Q
    |    
T  5779 c 5779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 10337 - 10481
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  10337 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 10436  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  10437 ccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 10481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 490 - 610
Target Start/End: Complemental strand, 30400 - 30273
Alignment:
Q  490 gaattacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||       ||||||| ||||||||||||||||||||||||||| ||| ||| |||| |||||||||| |||| |    
T  30400 gaattacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacactgcattcgacaccccgaaattcacagttga 30301  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    |||||||| |||||||| ||||| ||||    
T  30300 tgcttcctatgcttttcttctcttctcc 30273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 610
Target Start/End: Complemental strand, 127150 - 126992
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||  | ||||||||||||||||       || || | |||||||||||||||| ||||||||    
T  127150 ttgagatatttaagtactagatctaataggtgcattacttttttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacaca 127051  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||| ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  127050 gtgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 126992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 10787 - 10931
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  10787 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 10886  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| || |||||| |||||||| ||||| ||||    
T  10887 ccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 10931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 31946 - 32090
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  31946 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 32045  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| || |||||| |||||||| ||||| ||||    
T  32046 ccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 32090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 598
Target Start/End: Complemental strand, 7610 - 7478
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  7610 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 7511  T
Q  566 ccgaaattcatagttaatgcttcctctgctttt 598  Q
    |||||||||| |||| ||||||||| |||||||    
T  7510 ccgaaattcacagttgatgcttcctgtgctttt 7478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 13373 - 13517
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  13373 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 13472  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| || |||||| |||||||| ||||| ||||    
T  13473 ccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 13517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 21347 - 21491
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || |||| |||||||||||||||| |||||||||||| ||| |||||    
T  21347 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacaca 21446  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| || |||||| |||||||| ||||| ||||    
T  21447 ccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 21491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 30949 - 30856
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||| | ||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  30949 ttgtgaaatttctctataaatagagagctcacacaatgcattcaagacaccgaaattcacagttgatgcttcctatgcttttcttctcttctcc 30856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 610
Target Start/End: Original strand, 5228 - 5386
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||||| | |||||||| |  |||||||||||||||       || || | || ||||||||||||| ||||||||    
T  5228 ttgagatatttaagtactagatctaatatgtgcattacttgttttcaaagtttctcacttattagttgtaaactatccctataaatagagaactcacaca 5327  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| | | ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  5328 gtgcatcctacacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 518
Target Start/End: Original strand, 2120 - 2179
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt 518  Q
    |||||||||||  ||||||||||||||||| | |||||||| | ||||||||||||||||    
T  2120 ttgagatatttaagtactagatctaatatgtgcattacttgtttccaaagtttctcactt 2179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 456 - 516
Target Start/End: Complemental strand, 8337 - 8277
Alignment:
Q  456 aatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  8337 aatttgagatatttttgtactagatctaatatgtgaattacttgttcccaaagtttctcac 8277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 516
Target Start/End: Complemental strand, 2959 - 2899
Alignment:
Q  456 aatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  2959 aatttgacatatttttgtactagatctaatatgtgaattacttgttcccaaagtttctcac 2899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 459 - 610
Target Start/End: Complemental strand, 22054 - 21896
Alignment:
Q  459 ttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacaca 551  Q
    |||||||||||  ||||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| ||||||||    
T  22054 ttgagatatttaagtactagatctaataggtgcattacttgtttccaaagtttctcacttataagttgtaaactatctctataaatagagaactcacaca 21955  T
Q  552 gtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| ||| |||||| |||||||| |||| ||||||||| || ||||| ||||| ||||    
T  21954 gtgcattctacacactgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 21896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 473 - 610
Target Start/End: Original strand, 14838 - 14982
Alignment:
Q  473 tactagatctaatatgagaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacaca 565  Q
    |||||||||||||| | | |||||||| | ||||||||||||||||       || || | |||||||||||||||| |||||||||||| ||| |||||    
T  14838 tactagatctaataggtgcattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacaca 14937  T
Q  566 ccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||| |||| ||||||| | |||||||| ||||| ||||    
T  14938 ccgaaattcacagttgatgcttcttgtgcttttcttctcttctcc 14982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 1170 - 1077
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||| |||| |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  1170 ttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 50; Significance: 3e-19; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 3759 - 3852
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||   || |||||||||| |||| ||||||||| |||||||||||||| ||||    
T  3759 ttgtgaagtttctctataaatagagagctcacacaatgcattctgaaccccgaaattcacagttgatgcttcctgtgcttttcctctcttctcc 3852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 3386 - 3426
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  3386 taatgggagtacataattatgtgaacgaggtaagcactaga 3426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 12975 - 13015
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  12975 taatgggggtacataattgtgtgaacaaagtaagcactaga 13015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 490 - 610
Target Start/End: Original strand, 24674 - 24801
Alignment:
Q  490 gaattacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaa 582  Q
    |||||||||| ||||||||||||||||||       ||||| ||||||||||||||||||||||||||| ||| |||   || |||||||||| |||| |    
T  24674 gaattacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttga 24773  T
Q  583 tgcttcctctgcttttcctctctgctcc 610  Q
    || ||||| |||||||||||||| ||||    
T  24774 tgattcctgtgcttttcctctcttctcc 24801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 24333 - 24373
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  24333 taatgggggtacataattgtgtgaacgaagtaagcactaga 24373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 492 - 599
Target Start/End: Complemental strand, 71846 - 71731
Alignment:
Q  492 attacttgctcccaaagtttctcactt-------gtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaa-ttcatagttaat 583  Q
    |||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| |||| |||| ||    
T  71846 attacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacacagtgcattctacacaccaaaatttcacagttgat 71747  T
Q  584 gcttcctctgcttttc 599  Q
    ||||||| | ||||||    
T  71746 gcttcctgttcttttc 71731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 456 - 516
Target Start/End: Original strand, 5895 - 5955
Alignment:
Q  456 aatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  5895 aatttgagatatttttgtactagatctaatatgtgaattacttgttccgaaagtttctcac 5955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 48; Significance: 4e-18; HSPs: 4)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 492 - 610
Target Start/End: Complemental strand, 81272 - 81147
Alignment:
Q  492 attacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatg 584  Q
    |||||||| ||||||||||||||||       ||| ||| ||||||||||||||||| ||||||||| ||| ||| |||| |||||||||| |||| |||    
T  81272 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacaccccgaaattcacagttgatg 81173  T
Q  585 cttcctctgcttttcctctctgctcc 610  Q
     ||||| |||||||||||||| ||||    
T  81172 attcctgtgcttttcctctcttctcc 81147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 492 - 610
Target Start/End: Complemental strand, 64874 - 64749
Alignment:
Q  492 attacttgctcccaaagtttctcac-------ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatg 584  Q
    |||||||| ||||||||||||||||       ||| ||| ||||||||||||||||| ||||||||| ||| | | |||| |||||||||| |||| |||    
T  64874 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcgtacaacaccccgaaattcacagttgatg 64775  T
Q  585 cttcctctgcttttcctctctgctcc 610  Q
     ||| | |||||||||||||| ||||    
T  64774 attcatgtgcttttcctctcttctcc 64749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 65473 - 65433
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  65473 taatgggggtacataattgtgtgaacgaagtaagcactaga 65433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 81721 - 81681
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  81721 taatgggggtacataattgtgtgaacgaagtaagcactaga 81681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 527 - 610
Target Start/End: Original strand, 35433 - 35516
Alignment:
Q  527 tctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| || |||||| |||||||| ||||| ||||    
T  35433 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttcttctcttctcc 35516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 517 - 610
Target Start/End: Original strand, 19634 - 19727
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||   || |||||||||| |||| ||||||||| ||||||| |||||| ||||    
T  19634 ttgtgaagtttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgtgctttttctctcttctcc 19727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 8639 - 8679
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  8639 taatgggggtacataattgtgtgaacgaagtaagcactaga 8679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 610
Target Start/End: Original strand, 12390 - 12473
Alignment:
Q  527 tctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||||| |||| |||||| || || ||||| ||||| ||||    
T  12390 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgctttctgtgattttcttctcttctcc 12473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1910 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 610
Target Start/End: Complemental strand, 548 - 455
Alignment:
Q  517 ttgtgaattttctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||   | ||||||||||| |||| ||||||||| || ||||| ||||| ||||    
T  548 ttgtgaagtttctctataaatagagagctcacacaatgcattctggataccgaaattcacagttgatgcttcctgtgtttttcttctcttctcc 455  T

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Target: scaffold1910; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 898 - 858
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  898 taatgggggtacataattgtgtgaacgaagtaaacactaga 858  T

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Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 42 - 221
Target Start/End: Complemental strand, 257834 - 257663
Alignment:
Q  42 gtggaaattgagt-aactgactaaacacaaattctcacaatgggtagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcac 140  Q
    ||||||||||||| ||  ||||||||||||||||| |   || ||||||||| ||| ||||||||||||||||||| ||||| |||  || ||||| |||    
T  257834 gtggaaattgagttaaaagactaaacacaaattcttatgttgagtagaactaatgttgtgtgaattgaaaaaagtgaaagtctcac-acgaatgaaacac 257736  T
Q  141 acattagtagtgtagtgtttatatagtgggggtgtacctctaattaa-tgggggtacataattatgtgaacgaagtaagcac 221  Q
    ||||||     ||| |||||||||||||||| ||||||    || ||  |||||||||||||||| ||||| ||||||||||    
T  257735 acatta-----gtattgtttatatagtggggttgtacc----atcaagagggggtacataattatatgaacaaagtaagcac 257663  T

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Target: scaffold0292 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 527 - 610
Target Start/End: Complemental strand, 7839 - 7756
Alignment:
Q  527 tctctataaatagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    |||||||||||||||| |||||||||||| ||| |||||| |||||||| | || ||||||||| || ||||| ||||| ||||    
T  7839 tctctataaatagagaactcacacagtgcattctacacacagaaattcacaatttatgcttcctgtgattttcttctcttctcc 7756  T

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Target: scaffold0131 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 452 - 514
Target Start/End: Complemental strand, 8434 - 8372
Alignment:
Q  452 actcaatttgagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctc 514  Q
    ||||||||||| |||||||||||||| |||||||||  |||||||||| | ||||||||||||    
T  8434 actcaatttgatatatttttgtactatatctaatatatgaattacttgtttccaaagtttctc 8372  T

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Target: scaffold0131; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 8706 - 8648
Alignment:
Q  85 tagaactagtgtagtgtgaattgaaaaaagtggaagtcccacgtcggatgaatcacaca 143  Q
    |||||||||||| ||||||||||||||||||||||||| ||| | | || |||||||||    
T  8706 tagaactagtgttgtgtgaattgaaaaaagtggaagtctcacattgtataaatcacaca 8648  T

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Target: scaffold0777 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 461 - 516
Target Start/End: Original strand, 3811 - 3866
Alignment:
Q  461 gagatatttttgtactagatctaatatgagaattacttgctcccaaagtttctcac 516  Q
    |||||||||| ||||||||||||||||| || ||||||| | ||||||||||||||    
T  3811 gagatattttagtactagatctaatatgtgatttacttgtttccaaagtttctcac 3866  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 22576 - 22539
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcact 222  Q
    |||||||||||||||||| |||||||||||||||||||    
T  22576 taatgggggtacataattgtgtgaacgaagtaagcact 22539  T

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Target: scaffold0155; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 610
Target Start/End: Complemental strand, 22337 - 22264
Alignment:
Q  537 tagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| ||| |||   || |||||||||| |||| ||||||||| || ||||||||||| ||||    
T  22337 tagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgtggttttcctctcttctcc 22264  T

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Target: scaffold0863 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 307 - 267
Alignment:
Q  185 taatgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  307 taatgggggtacataattgtgtgaacgaagtaagcattaga 267  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 610
Target Start/End: Complemental strand, 22372 - 22298
Alignment:
Q  536 atagagagctcacacagtgctttccacacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||| |||||||||||| ||| ||||||||||||||| |||| ||  ||| | |||||||| ||||| ||||    
T  22372 atagagaactcacacagtgcattctacacaccgaaattcacagttgatttttcttgtgcttttcttctcttctcc 22298  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 225
Target Start/End: Complemental strand, 200241 - 200203
Alignment:
Q  187 atgggggtacataattatgtgaacgaagtaagcactaga 225  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  200241 atgggggtacataattgtgtgaatgaagtaagcactaga 200203  T

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Target: scaffold0232 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 610
Target Start/End: Complemental strand, 11832 - 11783
Alignment:
Q  561 acacaccgaaattcatagttaatgcttcctctgcttttcctctctgctcc 610  Q
    ||||||||||||||| |||| ||||||||| |||||||| ||||| ||||    
T  11832 acacaccgaaattcacagttgatgcttcctgtgcttttcttctcttctcc 11783  T

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