View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2562_high_52 (Length: 250)
Name: NF2562_high_52
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2562_high_52 |
 | |
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| [»] chr2 (1 HSPs) |
| |
|
| [»] chr6 (6 HSPs) |
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| [»] chr5 (18 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 17925856 - 17925622
Alignment:
| Q |
16 |
attagggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatctt |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
17925856 |
attagggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatctt |
17925757 |
T |
|
| Q |
116 |
ggaattcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatgg |
215 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17925756 |
ggaattcttccatccatttctgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatgg |
17925657 |
T |
|
| Q |
216 |
atctttatctccccatgtttgcaatctcacttttc |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
17925656 |
atctttatctccccatgtttgcaatctcacttttc |
17925622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 12897324 - 12897558
Alignment:
| Q |
16 |
attagggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatctt |
115 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
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|
| T |
12897324 |
attagggcattggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttccagtgacccatacaatgctcttgaatctt |
12897423 |
T |
|
| Q |
116 |
ggaattcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatgg |
215 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12897424 |
ggaattcttccatccatttctgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatgg |
12897523 |
T |
|
| Q |
216 |
atctttatctccccatgtttgcaatctcacttttc |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
12897524 |
atctttatctccccatgtttgcaatctcacttttc |
12897558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 12904945 - 12905179
Alignment:
| Q |
16 |
attagggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatctt |
115 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
12904945 |
attacggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaataactagtgacccatacaatgctcttgaatctt |
12905044 |
T |
|
| Q |
116 |
ggaattcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatgg |
215 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12905045 |
ggaattcttccatccatttctgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctagaaagatatcagttacatgg |
12905144 |
T |
|
| Q |
216 |
atctttatctccccatgtttgcaatctcacttttc |
250 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |
|
|
| T |
12905145 |
atctttatctccccatgtttccaatctcacttttc |
12905179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 12955837 - 12956071
Alignment:
| Q |
16 |
attagggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatctt |
115 |
Q |
| |
|
|||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
12955837 |
attaaggcaatgactgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttcaagtgacccatacaatgctcttgaatctt |
12955936 |
T |
|
| Q |
116 |
ggaattcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatgg |
215 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12955937 |
ggaattcttccatccatttctgcaagtggcaaggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatgg |
12956036 |
T |
|
| Q |
216 |
atctttatctccccatgtttgcaatctcacttttc |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
12956037 |
atctttatctccccatgtttgcaatctcacttttc |
12956071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 12930035 - 12930269
Alignment:
| Q |
16 |
attagggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatctt |
115 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
12930035 |
attagggcagtggctgcaataggaaagcaaactgatcatctggcattgctcaaattcaaagaatcaataactagtgacccatacaatactcttgaatctt |
12930134 |
T |
|
| Q |
116 |
ggaattcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatgg |
215 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930135 |
ggaattcttccatccacttctgcaagtggcatggaatcacatgtagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatgg |
12930234 |
T |
|
| Q |
216 |
atctttatctccccatgtttgcaatctcacttttc |
250 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930235 |
atctttatctccccatgtttgcaatctcacttttc |
12930269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 12946403 - 12946634
Alignment:
| Q |
19 |
agggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttgga |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
12946403 |
agggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttccagtgacccatacaaagctcttgaatcttgga |
12946502 |
T |
|
| Q |
119 |
attcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatc |
218 |
Q |
| |
|
|||| ||||| || || |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| |
|
|
| T |
12946503 |
attcatccattcacttctgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacacagttgactctagaaagatatcagttacatggatc |
12946602 |
T |
|
| Q |
219 |
tttatctccccatgtttgcaatctcacttttc |
250 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |
|
|
| T |
12946603 |
tttatctccccatgtttccaatctcacttttc |
12946634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 12955559 - 12955677
Alignment:
| Q |
16 |
attagggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatctt |
115 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12955559 |
attacggcagtgactgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaatgctcttgaatctt |
12955658 |
T |
|
| Q |
116 |
ggaattcttccatccattt |
134 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
12955659 |
ggaattcttccatccattt |
12955677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 10749460 - 10749231
Alignment:
| Q |
21 |
ggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttggaat |
120 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||||||||||| |||||| ||||||||||| || ||||||||| | ||||||||||||||||||||| |
|
|
| T |
10749460 |
ggcagtggctgcattaggaaaccaaacagatcatttggcattgcacaaatttaaagaatcaatatcgagtgacccaaataaagctcttgaatcttggaat |
10749361 |
T |
|
| Q |
121 |
tcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatctt |
220 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||| |||||||||||| |||||||| |||||| | || || ||||||| ||||||||||||| |
|
|
| T |
10749360 |
tcttccatccacttctgcaagtggcatggaatcacatgcaaacccatgcatgaaagagttacaaagttgaacttagaaggatatcatttacatggatctt |
10749261 |
T |
|
| Q |
221 |
tatctccccatgtttgcaatctcacttttc |
250 |
Q |
| |
|
|||| ||||||||| ||||||||||||||| |
|
|
| T |
10749260 |
tatcaccccatgttggcaatctcacttttc |
10749231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 21 - 243
Target Start/End: Complemental strand, 10719343 - 10719121
Alignment:
| Q |
21 |
ggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttggaat |
120 |
Q |
| |
|
||||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||| ||| | ||||| ||||| |||||||||||||||||||| |
|
|
| T |
10719343 |
ggcagtggctgcattaggtaaccaaacagatcatttagcattgctcaaattcaaagaatgaataaccagtgatccatatgaagctcttgaatcttggaat |
10719244 |
T |
|
| Q |
121 |
tcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatctt |
220 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||||| |||||||||||||| |
|
|
| T |
10719243 |
tcttccatccacttctgcaagtggcatggaatcacatgcagccccatgcatgaaagagttacagagttgaacctaggaggatatctgttacatggatctt |
10719144 |
T |
|
| Q |
221 |
tatctccccatgtttgcaatctc |
243 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
10719143 |
tatctccccatgttggcaatctc |
10719121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 10562791 - 10563015
Alignment:
| Q |
21 |
ggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttggaat |
120 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||||||| |
|
|
| T |
10562791 |
ggcagtggctgcattaggaaaccaaacagatcatttagcattgctcaaattcaaagaatcaatatccagtgatccatacaatgctcttgaatcttggaat |
10562890 |
T |
|
| Q |
121 |
tcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatctt |
220 |
Q |
| |
|
||||||||||| || ||||||||||| |||||||| |||| |||||||||| || |||||| |||||||| ||||| ||| |||| ||||||||||||| |
|
|
| T |
10562891 |
tcttccatccacttctgcaagtggcagggaatcacttgcaaccccatgcatcaaagagttatagagttgaacctaagaagtaatcacttacatggatctt |
10562990 |
T |
|
| Q |
221 |
tatctccccatgtttgcaatctcac |
245 |
Q |
| |
|
|||||||| ||||| |||||||||| |
|
|
| T |
10562991 |
tatctccctatgttggcaatctcac |
10563015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 10765560 - 10765331
Alignment:
| Q |
21 |
ggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttggaat |
120 |
Q |
| |
|
|||||||||| | ||||||||||| | ||||| ||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||| |
|
|
| T |
10765560 |
ggcagtggctcaattaggaaaccaatcagatcaattggcattgctcaaattcaaagaatcaatatcaagtgatccatataaagctcttgaatcttggaat |
10765461 |
T |
|
| Q |
121 |
tcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatctt |
220 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||| ||||||| || | ||||||||||||| |||| | ||||||||||||||||||||| |
|
|
| T |
10765460 |
tcttccatccacttttgaaagtggcatggaatcacatgcagcctcatgcatcaaagggttacagagttgaacctagcaggatatcagttacatggatctt |
10765361 |
T |
|
| Q |
221 |
tatctccccatgtttgcaatctcacttttc |
250 |
Q |
| |
|
|||||||| || || | ||||||||||||| |
|
|
| T |
10765360 |
tatctccctatcttggtaatctcacttttc |
10765331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 10743147 - 10742918
Alignment:
| Q |
21 |
ggcagtggctgcaataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttggaat |
120 |
Q |
| |
|
|||||||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
10743147 |
ggcagtggctcaattaggaaaccaatcagatcatttggcattgctcaaattcaaagaatcaatatcaagtgatccatataaagctcttgagtcttggaat |
10743048 |
T |
|
| Q |
121 |
tcttccatccatttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatctt |
220 |
Q |
| |
|
||||||||||| || ||||||||| ||||||||||||||| |||||||||| || |||||| ||||||| |||| ||| |||| ||||| ||| || |
|
|
| T |
10743047 |
tcttccatccacttctgcaagtggtatggaatcacatgcaaccccatgcatcaaagagttatagagttggacctaggaagttatcgcttacaaggacgtt |
10742948 |
T |
|
| Q |
221 |
tatctccccatgtttgcaatctcacttttc |
250 |
Q |
| |
|
|||| ||||||||| ||||||||||||||| |
|
|
| T |
10742947 |
tatccccccatgttggcaatctcacttttc |
10742918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 249
Target Start/End: Complemental strand, 11050303 - 11050089
Alignment:
| Q |
35 |
taggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttggaattcttccatccattt |
134 |
Q |
| |
|
||||||||||||| |||||||| |||||| | |||||||||||| |||| | |||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
11050303 |
taggaaaccaaacagatcattttgcattgattaaattcaaagaaacaatataccgtgacccaaatggagctcttgaatcttggaattcttccatccattt |
11050204 |
T |
|
| Q |
135 |
ttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatctttatctccccatgtt |
234 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| || |||||||| |||||| |||| || |||||||||| |||||||| |||| ||| ||||| |
|
|
| T |
11050203 |
ctgcaagtggcatggaatcacatgcagcctcatgcatcaaagagttacaaagttgaacctagaaggatatcagttgcatggatcaatatcaccctatgtt |
11050104 |
T |
|
| Q |
235 |
tgcaatctcactttt |
249 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
11050103 |
ggcaatctcactttt |
11050089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 183
Target Start/End: Complemental strand, 9838759 - 9838611
Alignment:
| Q |
35 |
taggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctctt-gaatcttggaattcttccatccatt |
133 |
Q |
| |
|
|||||||||||||||||||| | ||||||||| |||||||||||||||| || ||||||||| | || |||| || |||||||||||||| ||||| | |
|
|
| T |
9838759 |
taggaaaccaaactgatcatcttgcattgctccaattcaaagaatcaatatccagtgacccaaatggag-tcttagattcttggaattcttctatccact |
9838661 |
T |
|
| Q |
134 |
tttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttaca |
183 |
Q |
| |
|
| ||||| ||||||||||||||||||| |||||||||| || |||||||| |
|
|
| T |
9838660 |
tctgcaactggcatggaatcacatgcaaccccatgcatcaaagagttaca |
9838611 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 10609488 - 10609671
Alignment:
| Q |
35 |
taggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctctt-gaatcttggaattcttccatccatt |
133 |
Q |
| |
|
||||||||||||||||| ||||| ||||||| ||||||||||||||||| || | ||| ||| | || |||| || |||||||||| ||||||||||| |
|
|
| T |
10609488 |
taggaaaccaaactgattatttgtcattgcttaaattcaaagaatcaatatccaatgatccaaatggag-tcttagattcttggaatttttccatccatt |
10609586 |
T |
|
| Q |
134 |
tttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatc |
218 |
Q |
| |
|
| || ||||||| |||| ||||||||||| | ||||| || |||||| |||||||| ||| || |||||||||| |||||||| |
|
|
| T |
10609587 |
tatgtaagtggcgtggagtcacatgcagctctatgcaacaaagagttatagagttgaaccttgaaggatatcagttgcatggatc |
10609671 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 10556695 - 10556853
Alignment:
| Q |
32 |
caataggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttggaattcttccatcca |
131 |
Q |
| |
|
||||||||||||| | |||| ||||| |||||||||| || || ||| ||||| | ||||||| | | | ||||| ||||||||| ||| ||||| |
|
|
| T |
10556695 |
caataggaaaccagagtgattatttgacattgctcaagtttaagaaatttatttccaatgacccacatagaatccttgattcttggaatggttctatcca |
10556794 |
T |
|
| Q |
132 |
tttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttga |
190 |
Q |
| |
|
||||||||| ||| ||||||||||||||| | |||||||| || ||||||| ||||||| |
|
|
| T |
10556795 |
tttttgcaactggtatggaatcacatgcaacaccatgcatcaaagagttactgagttga |
10556853 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 160
Target Start/End: Original strand, 10548581 - 10548706
Alignment:
| Q |
35 |
taggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttggaattcttccatccattt |
134 |
Q |
| |
|
|||||||||||||||||||| | ||||||| |||||||| ||||| || | ||||||||| | | | ||||| ||||||||| ||| |||||||| |
|
|
| T |
10548581 |
taggaaaccaaactgatcatctatcattgcttaaattcaaggaatctataaccagtgacccacatagaatgcttgattcttggaatggttctatccattt |
10548680 |
T |
|
| Q |
135 |
ttgcaagtggcatggaatcacatgca |
160 |
Q |
| |
|
|||||| |||||||||||||| |||| |
|
|
| T |
10548681 |
ttgcaactggcatggaatcacgtgca |
10548706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 19608198 - 19608113
Alignment:
| Q |
133 |
ttttgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatc |
218 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| || |||||| ||| |||| |||| || ||||| | || |||||||| |
|
|
| T |
19608198 |
ttttgcaattggcatggaatcacatgcagccccatgcatcaaagagttatagaattgaacctacaaggatatgaattgcatggatc |
19608113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 10590858 - 10590795
Alignment:
| Q |
35 |
taggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccata |
98 |
Q |
| |
|
||||||||||||| |||||||||||||||||| ||||||| ||| ||| |||||||||||||| |
|
|
| T |
10590858 |
taggaaaccaaaccgatcatttggcattgctccaattcaagcaattaatatctagtgacccata |
10590795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 249
Target Start/End: Original strand, 7190881 - 7190994
Alignment:
| Q |
136 |
tgcaagtggcatggaatcacatgcagccccatgcatgaacgagttacagagttgagcctaaaaagatatcagttacatggatctttatctccccatgttt |
235 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||| || ||||| | ||||| | | | || |||||||| | ||||||| |||||||||||||| |
|
|
| T |
7190881 |
tgcaagtggtatggaatcacatgcagtcccatgcatcaaagagttgccgagttaaacttggaaggatatcagctgcatggattgatatctccccatgttg |
7190980 |
T |
|
| Q |
236 |
gcaatctcactttt |
249 |
Q |
| |
|
|||||||| ||||| |
|
|
| T |
7190981 |
gcaatctctctttt |
7190994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 10598867 - 10598930
Alignment:
| Q |
35 |
taggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccata |
98 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| ||| | | |||||||||||||| |
|
|
| T |
10598867 |
taggaaaccaaactgatcatttggctttgctccaattcaaccaattagtatctagtgacccata |
10598930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 10578786 - 10578921
Alignment:
| Q |
36 |
aggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgacccatacaaagctcttgaatcttggaattcttccatccatttt |
135 |
Q |
| |
|
|||||||||||| |||||||| || |||||| ||||||| ||||||| |||||||| ||||| ||| || ||||||||| |||| | ||| ||| |
|
|
| T |
10578786 |
aggaaaccaaaccgatcatttcgctttgctccaattcaagcaatcaatatctagtgatccatatggtattctagattcttggaatgcttcaacccacttt |
10578885 |
T |
|
| Q |
136 |
tgcaagtggcatggaatcacatgcagccccatgcat |
171 |
Q |
| |
|
||||| |||| ||||||| |||||| |||| |||| |
|
|
| T |
10578886 |
tgcaaatggcctggaatcgtatgcagtcccaagcat |
10578921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 10592729 - 10592764
Alignment:
| Q |
39 |
aaaccaaactgatcatttggcattgctcaaattcaa |
74 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10592729 |
aaaccaaactgatcatctggcattgctcaaattcaa |
10592764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 10602531 - 10602570
Alignment:
| Q |
35 |
taggaaaccaaactgatcatttggcattgctcaaattcaa |
74 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
10602531 |
taggaaaccaaactgatcatttggctttgctccaattcaa |
10602570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 10654604 - 10654570
Alignment:
| Q |
64 |
ctcaaattcaaagaatcaatttctagtgacccata |
98 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
10654604 |
ctcaaattcaaagaatcaatttctaatgacccata |
10654570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 39886433 - 39886373
Alignment:
| Q |
35 |
taggaaaccaaactgatcatttggcattgctcaaattcaaagaatcaatttctagtgaccc |
95 |
Q |
| |
|
|||||||| | ||||| |||| ||||| |||||||||||||||||||| || |||||||| |
|
|
| T |
39886433 |
taggaaacaacactgaccattctgcattactcaaattcaaagaatcaatgtccagtgaccc |
39886373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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