View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2562_high_53 (Length: 250)
Name: NF2562_high_53
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2562_high_53 |
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Alignment Details
Target: chr6 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 14 - 241
Target Start/End: Complemental strand, 34432467 - 34432237
Alignment:
| Q |
14 |
atataccttgtttactacttttaaaatataaatttcattaaccactttaattattttattaaccaaaaatgcaaaacattttcaaaattacaatacannn |
113 |
Q |
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| T |
34432467 |
atataccttgtttactacttttaaaatataaatttcattaaccactttaattattttattaaccaaaaatgcaaaacattttcaaaattacaatacattt |
34432368 |
T |
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| Q |
114 |
nnnngtggaaaatattacaatacatagattccaaaagtgtttaacagtagtacca---nnnnnnngttaacaaagcagtaaaaatgattaatgacacgtg |
210 |
Q |
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| T |
34432367 |
ttttgaggaaaatattacaatacatagattccaaaagtgtttaacagtagtaccattttttttttgttaacaaagcagtaaaaatgattaatgacacgtg |
34432268 |
T |
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| Q |
211 |
tttttgtattttaaaaattctcctctataag |
241 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
34432267 |
tttttgtattttaaaaattctcctctataag |
34432237 |
T |
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