View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2562_low_10 (Length: 486)

Name: NF2562_low_10
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2562_low_10
NF2562_low_10
[»] chr2 (69 HSPs)
chr2 (285-471)||(22651362-22651549)
chr2 (35-195)||(22651653-22651820)
chr2 (285-395)||(23870129-23870239)
chr2 (14-130)||(35353885-35354001)
chr2 (14-144)||(10589340-10589470)
chr2 (14-192)||(5071051-5071239)
chr2 (285-386)||(22718135-22718238)
chr2 (12-141)||(40039057-40039186)
chr2 (17-144)||(11798268-11798396)
chr2 (14-130)||(2251100-2251216)
chr2 (14-130)||(3397732-3397848)
chr2 (17-141)||(4732324-4732448)
chr2 (14-130)||(16720601-16720717)
chr2 (17-131)||(17767322-17767433)
chr2 (14-126)||(31125136-31125248)
chr2 (17-144)||(15920122-15920249)
chr2 (17-192)||(25622725-25622910)
chr2 (17-141)||(7581836-7581960)
chr2 (17-141)||(37883901-37884025)
chr2 (14-141)||(34480210-34480337)
chr2 (19-141)||(20570223-20570345)
chr2 (337-395)||(22708586-22708644)
chr2 (14-144)||(35333756-35333895)
chr2 (14-130)||(9978423-9978539)
chr2 (17-141)||(25068104-25068228)
chr2 (14-72)||(43696119-43696177)
chr2 (17-141)||(4739583-4739716)
chr2 (59-140)||(17056212-17056293)
chr2 (59-140)||(17068659-17068740)
chr2 (59-140)||(17095229-17095310)
chr2 (14-71)||(43929112-43929169)
chr2 (97-141)||(13268900-13268944)
chr2 (97-141)||(13878743-13878787)
chr2 (97-141)||(14018868-14018912)
chr2 (44-144)||(31271651-31271751)
chr2 (12-72)||(32015502-32015562)
chr2 (14-130)||(38384211-38384327)
chr2 (81-141)||(41797922-41797982)
chr2 (97-141)||(43696211-43696255)
chr2 (59-130)||(7072719-7072790)
chr2 (17-72)||(8064598-8064653)
chr2 (98-141)||(9715286-9715329)
chr2 (97-140)||(11931200-11931243)
chr2 (97-140)||(17118557-17118600)
chr2 (17-72)||(17267938-17267993)
chr2 (98-141)||(25508935-25508978)
chr2 (98-141)||(31580501-31580544)
chr2 (17-72)||(44942540-44942595)
chr2 (97-144)||(45035312-45035359)
chr2 (99-141)||(6174009-6174051)
chr2 (83-129)||(45693856-45693902)
chr2 (81-130)||(106567-106616)
chr2 (97-130)||(4878489-4878522)
chr2 (98-139)||(4904014-4904055)
chr2 (97-130)||(5754625-5754658)
chr2 (14-71)||(7640168-7640225)
chr2 (97-130)||(25237084-25237117)
chr2 (85-130)||(28261650-28261695)
chr2 (97-130)||(44589215-44589248)
chr2 (12-72)||(4426471-4426530)
chr2 (17-141)||(5172043-5172167)
chr2 (97-141)||(12890851-12890895)
chr2 (97-141)||(13548654-13548698)
chr2 (97-141)||(16136421-16136465)
chr2 (97-141)||(27096032-27096076)
chr2 (98-154)||(37994474-37994530)
chr2 (97-141)||(38535038-38535082)
chr2 (97-141)||(43473879-43473923)
chr2 (97-141)||(44942629-44942673)
[»] chr7 (66 HSPs)
chr7 (14-141)||(21552197-21552324)
chr7 (17-141)||(9137204-9137328)
chr7 (12-192)||(29804360-29804550)
chr7 (14-130)||(14733818-14733934)
chr7 (17-141)||(45482318-45482442)
chr7 (16-192)||(21328979-21329165)
chr7 (14-144)||(43483833-43483963)
chr7 (17-91)||(45949471-45949545)
chr7 (17-130)||(37375800-37375913)
chr7 (22-141)||(46918652-46918771)
chr7 (19-141)||(32741008-32741130)
chr7 (14-130)||(2532186-2532302)
chr7 (14-129)||(4621126-4621243)
chr7 (10-71)||(30992635-30992696)
chr7 (13-130)||(47156629-47156746)
chr7 (10-130)||(5684611-5684731)
chr7 (10-130)||(5709661-5709781)
chr7 (14-142)||(33530216-33530344)
chr7 (17-126)||(44482627-44482740)
chr7 (14-141)||(25531698-25531825)
chr7 (98-141)||(35496021-35496064)
chr7 (17-72)||(45457368-45457423)
chr7 (17-141)||(3266640-3266761)
chr7 (63-141)||(6667704-6667782)
chr7 (10-144)||(22379448-22379582)
chr7 (59-141)||(46025789-46025871)
chr7 (97-130)||(5238277-5238310)
chr7 (17-141)||(17473495-17473619)
chr7 (17-141)||(17579595-17579719)
chr7 (97-141)||(32643311-32643355)
chr7 (53-141)||(35134943-35135031)
chr7 (97-141)||(35141405-35141449)
chr7 (97-141)||(36579075-36579119)
chr7 (97-141)||(39544782-39544826)
chr7 (97-141)||(41288299-41288343)
chr7 (17-72)||(21954636-21954691)
chr7 (17-72)||(29352474-29352529)
chr7 (97-144)||(37714807-37714854)
chr7 (97-194)||(37890169-37890276)
chr7 (22-141)||(44681713-44681832)
chr7 (98-141)||(46339242-46339285)
chr7 (160-194)||(20206208-20206242)
chr7 (103-141)||(26161304-26161342)
chr7 (97-127)||(33095848-33095878)
chr7 (98-144)||(42408525-42408571)
chr7 (17-135)||(43098825-43098943)
chr7 (97-130)||(9785660-9785693)
chr7 (97-130)||(22747254-22747287)
chr7 (115-144)||(25112848-25112877)
chr7 (17-130)||(36350416-36350528)
chr7 (97-130)||(41748280-41748313)
chr7 (97-142)||(43398690-43398735)
chr7 (97-141)||(134887-134931)
chr7 (97-141)||(6646343-6646387)
chr7 (97-141)||(9137734-9137778)
chr7 (105-141)||(10624134-10624170)
chr7 (147-194)||(11833426-11833474)
chr7 (97-141)||(17508938-17508982)
chr7 (97-141)||(17544232-17544276)
chr7 (142-194)||(25854891-25854942)
chr7 (97-141)||(28015685-28015729)
chr7 (97-141)||(32587273-32587317)
chr7 (12-72)||(40761837-40761897)
chr7 (97-141)||(40761931-40761975)
chr7 (148-191)||(42603447-42603491)
chr7 (97-141)||(42644998-42645042)
[»] chr8 (61 HSPs)
chr8 (15-192)||(14530597-14530784)
chr8 (14-130)||(32062039-32062155)
chr8 (13-144)||(12357039-12357170)
chr8 (17-141)||(10148199-10148323)
chr8 (97-144)||(26673521-26673568)
chr8 (14-141)||(27534154-27534281)
chr8 (14-188)||(37720085-37720268)
chr8 (24-140)||(18190594-18190710)
chr8 (22-116)||(3028269-3028363)
chr8 (14-130)||(1215094-1215210)
chr8 (17-141)||(3925432-3925556)
chr8 (14-141)||(11298504-11298629)
chr8 (14-141)||(32256463-32256590)
chr8 (14-141)||(32920889-32921016)
chr8 (12-141)||(2024966-2025104)
chr8 (52-141)||(12243958-12244047)
chr8 (12-141)||(13575951-13576080)
chr8 (20-141)||(16809114-16809235)
chr8 (97-141)||(3204528-3204572)
chr8 (12-72)||(5526051-5526111)
chr8 (17-141)||(16937081-16937205)
chr8 (17-137)||(18196892-18197012)
chr8 (12-72)||(30026702-30026762)
chr8 (17-141)||(32778714-32778838)
chr8 (17-72)||(2234290-2234345)
chr8 (98-141)||(11464366-11464409)
chr8 (10-71)||(13977649-13977710)
chr8 (17-141)||(6219854-6219977)
chr8 (97-141)||(14600440-14600484)
chr8 (97-141)||(24700178-24700222)
chr8 (98-154)||(36033586-36033642)
chr8 (97-141)||(37612979-37613023)
chr8 (97-141)||(41362075-41362119)
chr8 (17-72)||(19720263-19720318)
chr8 (14-194)||(5457316-5457506)
chr8 (18-72)||(7579675-7579729)
chr8 (59-141)||(10952038-10952120)
chr8 (59-141)||(10960043-10960125)
chr8 (63-141)||(24790910-24790988)
chr8 (98-139)||(471030-471071)
chr8 (97-130)||(4757491-4757524)
chr8 (52-141)||(5989896-5989985)
chr8 (150-194)||(7579528-7579573)
chr8 (97-130)||(12248464-12248497)
chr8 (98-139)||(17693479-17693520)
chr8 (97-130)||(31712829-31712862)
chr8 (14-71)||(32104649-32104706)
chr8 (17-69)||(3204608-3204660)
chr8 (97-141)||(4429389-4429433)
chr8 (23-71)||(8054620-8054668)
chr8 (97-129)||(9501912-9501944)
chr8 (97-141)||(17019428-17019472)
chr8 (97-141)||(17549865-17549909)
chr8 (97-141)||(18994210-18994254)
chr8 (97-141)||(19489156-19489200)
chr8 (97-141)||(22787833-22787877)
chr8 (97-141)||(23970925-23970969)
chr8 (20-72)||(28296936-28296988)
chr8 (17-69)||(31308402-31308454)
chr8 (17-69)||(38545977-38546029)
chr8 (97-141)||(43936922-43936966)
[»] chr4 (66 HSPs)
chr4 (14-141)||(35658273-35658400)
chr4 (12-144)||(6082170-6082302)
chr4 (14-141)||(5814591-5814718)
chr4 (12-141)||(23926284-23926413)
chr4 (17-198)||(29589036-29589227)
chr4 (17-141)||(38943891-38944015)
chr4 (14-129)||(33020681-33020796)
chr4 (17-141)||(7083555-7083679)
chr4 (14-130)||(50981467-50981583)
chr4 (17-130)||(11817304-11817417)
chr4 (14-130)||(7060574-7060690)
chr4 (17-141)||(26742206-26742330)
chr4 (17-141)||(36124091-36124215)
chr4 (17-129)||(38434847-38434958)
chr4 (17-141)||(43157025-43157149)
chr4 (18-141)||(477755-477878)
chr4 (17-194)||(14346679-14346866)
chr4 (17-116)||(29257473-29257572)
chr4 (17-72)||(30202292-30202347)
chr4 (14-72)||(31522197-31522255)
chr4 (12-130)||(51152373-51152491)
chr4 (17-141)||(22757348-22757472)
chr4 (17-141)||(29474070-29474194)
chr4 (12-72)||(32616671-32616731)
chr4 (98-141)||(45227887-45227930)
chr4 (98-144)||(9284111-9284157)
chr4 (98-144)||(38706553-38706599)
chr4 (97-139)||(56172156-56172198)
chr4 (97-142)||(4622444-4622489)
chr4 (20-137)||(28990549-28990666)
chr4 (14-71)||(42972283-42972340)
chr4 (58-192)||(3673777-3673921)
chr4 (97-141)||(6912023-6912067)
chr4 (97-141)||(7084283-7084327)
chr4 (98-146)||(27593670-27593718)
chr4 (97-141)||(30416370-30416414)
chr4 (97-141)||(40861266-40861310)
chr4 (98-145)||(10359390-10359437)
chr4 (97-144)||(20887488-20887535)
chr4 (14-144)||(38169898-38170029)
chr4 (98-141)||(44947612-44947655)
chr4 (81-140)||(46829719-46829778)
chr4 (98-141)||(49410423-49410466)
chr4 (98-141)||(53616496-53616539)
chr4 (17-141)||(6882210-6882331)
chr4 (14-72)||(11210125-11210183)
chr4 (160-194)||(23067527-23067561)
chr4 (17-63)||(29266706-29266752)
chr4 (17-71)||(29576933-29576987)
chr4 (97-139)||(45350806-45350848)
chr4 (97-139)||(45360285-45360327)
chr4 (100-141)||(2945469-2945510)
chr4 (97-130)||(8712850-8712883)
chr4 (22-63)||(12519909-12519950)
chr4 (14-71)||(34115468-34115525)
chr4 (60-141)||(47466208-47466289)
chr4 (52-141)||(51646380-51646469)
chr4 (97-141)||(6789619-6789663)
chr4 (20-116)||(9549690-9549786)
chr4 (97-141)||(11299876-11299920)
chr4 (97-129)||(22049165-22049197)
chr4 (53-141)||(26623947-26624035)
chr4 (97-141)||(26674706-26674750)
chr4 (97-141)||(40198286-40198330)
chr4 (12-72)||(43244193-43244253)
chr4 (97-141)||(46728662-46728706)
[»] chr6 (42 HSPs)
chr6 (16-192)||(34020850-34021036)
chr6 (14-141)||(12654052-12654179)
chr6 (17-144)||(12481110-12481237)
chr6 (52-144)||(8644511-8644603)
chr6 (20-137)||(15127876-15127992)
chr6 (97-141)||(4660771-4660815)
chr6 (97-141)||(5416966-5417010)
chr6 (10-122)||(7049486-7049598)
chr6 (17-141)||(30813320-30813444)
chr6 (17-141)||(14782889-14783009)
chr6 (97-131)||(14730948-14730982)
chr6 (84-141)||(29920651-29920708)
chr6 (97-141)||(23654593-23654637)
chr6 (17-72)||(2304650-2304705)
chr6 (17-72)||(4394024-4394079)
chr6 (148-198)||(6295910-6295961)
chr6 (148-198)||(6302720-6302771)
chr6 (17-72)||(13871438-13871493)
chr6 (17-72)||(23101220-23101275)
chr6 (17-72)||(23637932-23637987)
chr6 (17-72)||(23654504-23654559)
chr6 (98-141)||(23947163-23947206)
chr6 (98-133)||(30879592-30879627)
chr6 (17-130)||(1106612-1106734)
chr6 (52-141)||(3338089-3338178)
chr6 (97-130)||(6295994-6296027)
chr6 (97-130)||(6302804-6302837)
chr6 (59-144)||(8978487-8978572)
chr6 (150-194)||(15589790-15589835)
chr6 (14-71)||(19760033-19760090)
chr6 (52-141)||(20496476-20496565)
chr6 (97-130)||(21507599-21507632)
chr6 (14-71)||(23843236-23843293)
chr6 (97-141)||(4663562-4663606)
chr6 (97-141)||(7870482-7870526)
chr6 (97-141)||(8693405-8693449)
chr6 (97-141)||(11426273-11426317)
chr6 (97-141)||(13871359-13871403)
chr6 (24-72)||(19402664-19402712)
chr6 (97-141)||(23101142-23101186)
chr6 (14-130)||(33541284-33541400)
chr6 (97-137)||(35039019-35039059)
[»] chr3 (54 HSPs)
chr3 (17-141)||(4019846-4019970)
chr3 (17-141)||(55446311-55446435)
chr3 (14-192)||(37051839-37052031)
chr3 (14-130)||(1806212-1806328)
chr3 (17-141)||(33637657-33637781)
chr3 (19-141)||(55455127-55455249)
chr3 (17-141)||(105789-105916)
chr3 (14-130)||(32080516-32080632)
chr3 (17-141)||(50460438-50460562)
chr3 (98-145)||(20987617-20987664)
chr3 (17-140)||(48652192-48652315)
chr3 (10-72)||(19861099-19861161)
chr3 (17-130)||(30156043-30156156)
chr3 (12-72)||(36624515-36624575)
chr3 (17-141)||(47587115-47587239)
chr3 (14-141)||(913058-913185)
chr3 (14-141)||(2148001-2148127)
chr3 (98-141)||(25631372-25631415)
chr3 (14-141)||(28995051-28995178)
chr3 (14-141)||(40797278-40797405)
chr3 (17-72)||(51990695-51990750)
chr3 (17-130)||(1074647-1074769)
chr3 (17-130)||(22844300-22844413)
chr3 (103-144)||(27856349-27856390)
chr3 (20-141)||(40883617-40883738)
chr3 (85-141)||(40702751-40702807)
chr3 (97-141)||(42106466-42106510)
chr3 (97-141)||(48855220-48855264)
chr3 (54-141)||(25939238-25939325)
chr3 (17-72)||(36691619-36691674)
chr3 (98-141)||(36906307-36906350)
chr3 (12-130)||(41868086-41868203)
chr3 (98-141)||(46934824-46934867)
chr3 (98-141)||(48401180-48401223)
chr3 (98-141)||(48401436-48401479)
chr3 (148-194)||(48401501-48401548)
chr3 (17-72)||(53155250-53155305)
chr3 (17-108)||(53427046-53427137)
chr3 (10-72)||(25135137-25135199)
chr3 (17-71)||(39340447-39340501)
chr3 (97-131)||(48212656-48212690)
chr3 (97-130)||(11819425-11819458)
chr3 (14-71)||(33076530-33076587)
chr3 (17-130)||(34103510-34103623)
chr3 (97-130)||(35175051-35175084)
chr3 (150-194)||(49627777-49627822)
chr3 (97-141)||(3457265-3457309)
chr3 (97-141)||(13701744-13701788)
chr3 (97-141)||(22485308-22485352)
chr3 (97-141)||(32237738-32237782)
chr3 (14-70)||(35174959-35175015)
chr3 (83-194)||(35501448-35501559)
chr3 (97-141)||(40365552-40365596)
chr3 (12-72)||(48855126-48855186)
[»] chr1 (68 HSPs)
chr1 (14-141)||(13691505-13691632)
chr1 (17-141)||(13969382-13969506)
chr1 (14-195)||(2350867-2351057)
chr1 (17-130)||(47551343-47551456)
chr1 (17-141)||(40862568-40862692)
chr1 (32-192)||(34566944-34567114)
chr1 (17-137)||(4870780-4870900)
chr1 (17-129)||(27469462-27469574)
chr1 (17-137)||(32878956-32879076)
chr1 (17-144)||(26771354-26771481)
chr1 (17-194)||(46589396-46589583)
chr1 (12-130)||(12871864-12871982)
chr1 (12-141)||(9298165-9298294)
chr1 (17-141)||(33177340-33177464)
chr1 (17-141)||(44513744-44513868)
chr1 (56-192)||(37662643-37662785)
chr1 (12-141)||(10304821-10304950)
chr1 (17-141)||(12147790-12147914)
chr1 (97-141)||(15312361-15312405)
chr1 (17-141)||(18343866-18343990)
chr1 (97-141)||(20413126-20413170)
chr1 (17-72)||(14265538-14265593)
chr1 (97-144)||(32301666-32301713)
chr1 (17-72)||(45193440-45193495)
chr1 (18-72)||(6158848-6158902)
chr1 (13-127)||(38783311-38783425)
chr1 (14-71)||(21326718-21326775)
chr1 (103-144)||(32676978-32677019)
chr1 (14-123)||(38646829-38646938)
chr1 (97-195)||(42491215-42491326)
chr1 (14-71)||(44562561-44562618)
chr1 (97-141)||(13999285-13999329)
chr1 (97-141)||(28677873-28677917)
chr1 (97-141)||(34039317-34039361)
chr1 (17-141)||(34659383-34659507)
chr1 (98-141)||(7997981-7998024)
chr1 (97-194)||(8893620-8893727)
chr1 (98-141)||(9687051-9687094)
chr1 (17-72)||(10627253-10627308)
chr1 (97-136)||(26097771-26097810)
chr1 (17-72)||(27534951-27535006)
chr1 (97-140)||(27535040-27535083)
chr1 (17-72)||(32784333-32784388)
chr1 (98-141)||(33817014-33817057)
chr1 (98-141)||(33876484-33876527)
chr1 (17-72)||(44517402-44517457)
chr1 (97-144)||(51418327-51418374)
chr1 (103-141)||(9172687-9172725)
chr1 (103-141)||(9180669-9180707)
chr1 (97-131)||(11877206-11877240)
chr1 (98-144)||(25406127-25406173)
chr1 (52-130)||(28399089-28399167)
chr1 (160-194)||(36621752-36621786)
chr1 (14-72)||(45750729-45750787)
chr1 (103-141)||(45805675-45805713)
chr1 (142-194)||(900433-900486)
chr1 (59-140)||(10599169-10599250)
chr1 (52-141)||(33001800-33001889)
chr1 (154-194)||(5856152-5856192)
chr1 (97-141)||(7995311-7995355)
chr1 (15-51)||(16262964-16263000)
chr1 (59-131)||(33125564-33125636)
chr1 (104-144)||(33486767-33486807)
chr1 (97-141)||(42276698-42276742)
chr1 (97-129)||(45193374-45193406)
chr1 (97-141)||(45750821-45750865)
chr1 (52-144)||(47392419-47392511)
chr1 (105-141)||(50107662-50107698)
[»] chr5 (63 HSPs)
chr5 (14-144)||(40564896-40565026)
chr5 (14-130)||(20145972-20146088)
chr5 (14-144)||(7151056-7151186)
chr5 (14-141)||(35455337-35455463)
chr5 (14-192)||(6074417-6074605)
chr5 (14-141)||(6647655-6647782)
chr5 (26-144)||(17325403-17325519)
chr5 (17-140)||(20270962-20271085)
chr5 (17-141)||(33486311-33486435)
chr5 (14-72)||(2555162-2555220)
chr5 (14-128)||(8957451-8957565)
chr5 (17-139)||(39591296-39591418)
chr5 (51-141)||(42505145-42505235)
chr5 (97-194)||(17218052-17218158)
chr5 (17-130)||(41554735-41554848)
chr5 (14-130)||(12524417-12524533)
chr5 (17-141)||(18472468-18472592)
chr5 (17-137)||(25962167-25962287)
chr5 (17-136)||(25770854-25770973)
chr5 (14-71)||(4726740-4726797)
chr5 (97-130)||(12891977-12892010)
chr5 (97-138)||(13599279-13599320)
chr5 (17-130)||(23428506-23428619)
chr5 (103-144)||(32309845-32309886)
chr5 (97-141)||(6281387-6281431)
chr5 (14-130)||(8811905-8812021)
chr5 (97-141)||(11976801-11976845)
chr5 (97-141)||(17095975-17096019)
chr5 (97-141)||(26294808-26294852)
chr5 (14-130)||(2415645-2415763)
chr5 (17-72)||(6681688-6681743)
chr5 (17-72)||(7771633-7771688)
chr5 (110-141)||(17067521-17067552)
chr5 (17-72)||(17331582-17331637)
chr5 (98-141)||(20257542-20257585)
chr5 (17-72)||(26293864-26293919)
chr5 (22-141)||(29154473-29154592)
chr5 (17-144)||(34866679-34866806)
chr5 (142-200)||(41358416-41358475)
chr5 (97-131)||(9425341-9425375)
chr5 (98-144)||(27752115-27752161)
chr5 (160-194)||(33164134-33164168)
chr5 (14-72)||(42512801-42512859)
chr5 (97-130)||(3079079-3079112)
chr5 (59-140)||(3740636-3740717)
chr5 (14-71)||(5378547-5378604)
chr5 (97-130)||(12439434-12439467)
chr5 (97-142)||(17732119-17732164)
chr5 (63-128)||(23881863-23881928)
chr5 (63-140)||(39179580-39179657)
chr5 (97-130)||(39531157-39531190)
chr5 (148-191)||(6635657-6635701)
chr5 (97-141)||(7771555-7771599)
chr5 (97-141)||(15710872-15710916)
chr5 (97-141)||(17699896-17699940)
chr5 (97-141)||(20483529-20483573)
chr5 (97-141)||(27241398-27241442)
chr5 (97-141)||(32390406-32390450)
chr5 (97-129)||(33164215-33164247)
chr5 (97-141)||(37219331-37219375)
chr5 (97-141)||(39308493-39308537)
chr5 (97-133)||(39415419-39415455)
chr5 (20-72)||(42609401-42609453)
[»] scaffold0112 (1 HSPs)
scaffold0112 (14-126)||(25269-25381)
[»] scaffold0009 (1 HSPs)
scaffold0009 (14-92)||(105285-105363)
[»] scaffold0316 (1 HSPs)
scaffold0316 (14-141)||(11945-12072)
[»] scaffold0155 (1 HSPs)
scaffold0155 (17-130)||(35338-35451)
[»] scaffold0042 (1 HSPs)
scaffold0042 (85-194)||(93999-94111)
[»] scaffold0536 (2 HSPs)
scaffold0536 (97-141)||(3238-3282)
scaffold0536 (149-194)||(3305-3351)
[»] scaffold0388 (1 HSPs)
scaffold0388 (17-81)||(10197-10261)
[»] scaffold0056 (1 HSPs)
scaffold0056 (12-72)||(74413-74473)
[»] scaffold0432 (1 HSPs)
scaffold0432 (17-72)||(2254-2309)
[»] scaffold0340 (1 HSPs)
scaffold0340 (17-198)||(11451-11642)
[»] scaffold0999 (1 HSPs)
scaffold0999 (14-130)||(1949-2065)
[»] scaffold0294 (1 HSPs)
scaffold0294 (63-141)||(3801-3879)
[»] scaffold0722 (1 HSPs)
scaffold0722 (14-71)||(5338-5395)
[»] scaffold0321 (2 HSPs)
scaffold0321 (19-72)||(6942-6995)
scaffold0321 (97-141)||(6864-6908)
[»] scaffold0157 (1 HSPs)
scaffold0157 (22-63)||(961-1002)
[»] scaffold1294 (1 HSPs)
scaffold1294 (44-144)||(1050-1150)
[»] scaffold0288 (1 HSPs)
scaffold0288 (97-129)||(20936-20968)
[»] scaffold0219 (1 HSPs)
scaffold0219 (20-72)||(21227-21279)
[»] scaffold0150 (1 HSPs)
scaffold0150 (97-141)||(10071-10115)


Alignment Details
Target: chr2 (Bit Score: 152; Significance: 3e-80; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 285 - 471
Target Start/End: Complemental strand, 22651549 - 22651362
Alignment:
Q  285 ccttgaaatttcttaacttatgacttcatattaatcactttgtattattcagtgctattttccataaatttagttggtggagtggaggtagaataagagt 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22651549 ccttgaaatttcttaacttatgacttcatattaatcactttgtattattcagtgctattttccataaatttagttggtggagtggaggtagaataagagt 22651450  T
Q  385 gctattgaccc-nnnnnnnngaagataaaagtgcaccttgatgctacttctaagaaattacttaaaagtcaaaagaaagtatggatct 471  Q
    |||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22651449 gctattgacccaaaaaaaaagaagataaaagtgcaccttgatgctacttctaagaaattacttaaaagtcaaaagaaaatatggatct 22651362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 35 - 195
Target Start/End: Complemental strand, 22651820 - 22651653
Alignment:
Q  35 aggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtag 134  Q
    |||||||||||||||| |||||||||||  ||||||||  |||  |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  22651820 aggcatgactattctggagactttaata--gtcatatttgtaggtttatatactttgtcagcttatgttattaacatggataatgtgagtttgatcgtag 22651723  T
Q  135 attcat---------ctttaacgaatttatattgatcgatgtactctgtcaacttgaatgaatgaatatt 195  Q
    ||||||         |||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  22651722 attcatcttttttatctttaacgaatttatattgatcgatgtattttgtcaacttgaatgaatgaatatt 22651653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 23870129 - 23870239
Alignment:
Q  285 ccttgaaatttcttaacttatgacttcatattaatcactttgtattattcagtgctattttccataaatttagttggtggagtggaggtagaataagagt 384  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||| |||||||||||||||||||    
T  23870129 ccttcaaatttcttaacttgtgacttcatattaatcactttgtattatttagtgctattttccataaatctagtagttggtgtggaggtagaataagagt 23870228  T
Q  385 gctattgaccc 395  Q
    |||||||||||    
T  23870229 gctattgaccc 23870239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 35353885 - 35354001
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||| |||| ||||| ||||||||    ||||| |||||||||||    
T  35353885 tcatcaacgttgcagatccggaggcatgactatttcggagattttaatatagtcatatttataggcttatgtactttgttgttttatgctattaacatgg 35353984  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| |||||||||||||    
T  35353985 atgttgtgagtttgttc 35354001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 10589340 - 10589470
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||| || |  ||||| |||||||| |||||||||||||  |||| |||  |||||||| |   ||||| |||||||||||    
T  10589340 tcatcaacgttgcagatccggagacaagggtattccgaagacttaaatatagtcatatgtataggctttaatactttgccgttttatgctattaacatgg 10589439  T
Q  114 atgatgtgagtttgttcgtagattcatcttt 144  Q
    |||||||||||||||||  ||||||||||||    
T  10589440 atgatgtgagtttgttcacagattcatcttt 10589470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 5071239 - 5071051
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||||||||||||| |||||| | | | |||||||||||||||||  ||| ||||| || | || |   ||||| |||||||||||    
T  5071239 tcatcaacgttgcagatccggaggcatggctattccggatattttaatatagtcatatttgtaggcttatgtattatgccgttttatgctattaacatgg 5071140  T
Q  114 atgatgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaat 192  Q
    ||| |||||||||||||| |||||||||          ||| ||||||| ||||| ||||||||||||| |||| ||||||||||||||    
T  5071139 atgttgtgagtttgttcgcagattcatcctttttgttattagcgaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 5071051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 386
Target Start/End: Complemental strand, 22718238 - 22718135
Alignment:
Q  285 ccttgaaatttcttaacttatgacttcatattaatcactttgtattattcagtgctattttccataaatttagttggtg--gagtggaggtagaataaga 382  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| |||| | ||  | ||||||||| |||||||    
T  22718238 ccttcaaatttcttaacttgtgacttcatattaatcactttgtattatttagtgttattttccataaatctagtagttggtgtgtggaggtaaaataaga 22718139  T
Q  383 gtgc 386  Q
    ||||    
T  22718138 gtgc 22718135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 40039186 - 40039057
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    ||||||||||||||||||||||||  ||||||||||  || | ||||||||||  |||||| |||  | ||| ||| |||| |  ||||| |||||||||    
T  40039186 catcatcaacgttgcagatccggaaacatgactatttcgatggctttaatataaccatatttataagcatatgtaccttgtaattttatgctattaacat 40039087  T
Q  112 ggatgatgtgagtttgttcgtagattcatc 141  Q
    ||| | ||||||||||||||||||||||||    
T  40039086 ggacgttgtgagtttgttcgtagattcatc 40039057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 11798396 - 11798268
Alignment:
Q  17 tcaacgttgcagatc-cggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggat 115  Q
    ||||||||||||||  ||||| ||||| |||| || |||||| ||||||||||||||  ||| | ||  |||||||||   ||||| |||||||||||||    
T  11798396 tcaacgttgcagatttcggagacatgagtattatggagacttgaatatagtcatatttgtaggcataggtactttgtcgttttatgctattaacatggat 11798297  T
Q  116 gatgtgagtttgttcgtagattcatcttt 144  Q
    | |||||||||||||| ||||||||||||    
T  11798296 gttgtgagtttgttcgcagattcatcttt 11798268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 2251216 - 2251100
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcag-cttatgttattaacatg 112  Q
    |||||||||||||||||||| |||||||  ||||| | ||| |||||||||||||||||  ||| ||||| ||||||| |||  ||||| ||||||||||    
T  2251216 tcatcaacgttgcagatccgaaggcatggttattccggagattttaatatagtcatatttgtaggcttatgtactttg-cagttttatgctattaacatg 2251118  T
Q  113 gatgatgtgagtttgttc 130  Q
    ||||  ||||||||||||    
T  2251117 gatgtcgtgagtttgttc 2251100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 3397848 - 3397732
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||| |||||||||||||| |||| |||||  | ||| |||||||||||||||||  ||  ||||| |||||||||   ||||| |||||||||||    
T  3397848 tcatcaacattgcagatccggagacatggctatttcggagattttaatatagtcatatttgtatgcttatgtactttgtcgttttatgctattaacatgg 3397749  T
Q  114 atgatgtgagtttgttc 130  Q
     || |||||||||||||    
T  3397748 ttgttgtgagtttgttc 3397732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 4732324 - 4732448
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||| ||||| | |||||| ||||||||||||||  ||| | || ||  |||||    ||||| ||||||||||||||    
T  4732324 tcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcatatttgtaggcataaattttttgttgttttatgctattaacatggatg 4732423  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  4732424 ttgtgagtttgttcacagattcatc 4732448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 16720717 - 16720601
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||| ||||||||||||| ||  ||||| ||||||| |||||| |||||||||||||   ||| | | | ||||||||||  ||||| |||||||||||    
T  16720717 tcatccacgttgcagatccagatacatgattattctggagacttaaatatagtcatatgtgtaggcatttgtactttgtcattttatgctattaacatgg 16720618  T
Q  114 atgatgtgagtttgttc 130  Q
    ||||||||||| |||||    
T  16720617 atgatgtgagtctgttc 16720601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 17767433 - 17767322
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||| |||| |  |||||| ||||||||||||||  ||| | || ||||||||    |||||| ||||||||||||||    
T  17767433 tcaacgttgcagatccggagacatgagtattattgagacttgaatatagtcatatttgtaggcatagatactttg---ccttatgctattaacatggatg 17767337  T
Q  117 atgtgagtttgttcg 131  Q
     ||||||||||||||    
T  17767336 ttgtgagtttgttcg 17767322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 31125248 - 31125136
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||| ||||||||| ||||||||||||||||| | ||| ||||||||||| |||||  ||| ||||| ||||||| |   ||||| |||||||||||    
T  31125248 tcatcaatgttgcagattcggaggcatgactattccggagattttaatatagttatatttgtaggcttatgtactttgccgttttatgatattaacatgg 31125149  T
Q  114 atgatgtgagttt 126  Q
    ||| ||| |||||    
T  31125148 atgttgtaagttt 31125136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 15920122 - 15920249
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||  ||||| ||||  |||||||| ||||||||||||||  ||| | ||| ||||||| |   ||||| ||||||||| ||||    
T  15920122 tcaacgttgcagatccggaaacatgagtatttcgaagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacattgatg 15920221  T
Q  117 atgtgagtttgttcgtagattcatcttt 144  Q
     || ||||||||||  ||||||||||||    
T  15920222 ttgcgagtttgttcacagattcatcttt 15920249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 25622910 - 25622725
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||| ||||| || || ||||| ||||| | ||||||||||||||||||||   ||| ||| | ||||||| |   ||||| ||||||||||||||    
T  25622910 tcaacgttacagattcgaagacatgagtattccggagactttaatatagtcatatgtgtaggcttttgtactttgacgttttatgctattaacatggatg 25622811  T
Q  117 atgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaat 192  Q
     |||||||||||||| | |||||||         |||| |||||||| |||| ||||||||||||| |||| || |||||||||||    
T  25622810 ttgtgagtttgttcgcatattcatcctttttgtttttagcgaatttacattgtatcgatgtactctatcaatttaaatgaatgaat 25622725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 7581960 - 7581836
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||| ||||||| || ||||| ||||||| |||||| |||||| |||||||  ||| | || ||||| | |||  ||||| |||||||| |||||    
T  7581960 tcaacgttgtagatccgaagacatgaatattctggagacttcaatataatcatatttgtaggcataaatactctatcattttatgctattaacacggatg 7581861  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    |  |||||||||||| |||||||||    
T  7581860 aaatgagtttgttcgcagattcatc 7581836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 37883901 - 37884025
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||| ||||| ||||| ||||||  | |||| |||||||||||||   ||| |||   ||||||| |   ||||| ||||||||||||||    
T  37883901 tcaacgttgcagatacggagacatgagtattctagatacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatggatg 37884000  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  37884001 atgtgagtttgttcacagattcatc 37884025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 34480210 - 34480337
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||| ||||||||||||||||| ||||| ||||| |  ||||| |||||||||||||   |||  || | |||||||||   ||||  |||||||||||    
T  34480210 tcatccacgttgcagatccggagacatgagtattccggcgacttgaatatagtcatatgtgtaggtttttgtactttgtcgttttattctattaacatgg 34480309  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| |||||||||||||| | |||||||    
T  34480310 atgttgtgagtttgttcgcatattcatc 34480337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 20570223 - 20570345
Alignment:
Q  19 aacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgat 118  Q
    |||||| ||||||||||| ||||| ||||| |||||||| |||||||||||| |  ||  | ||  |||||||||   ||||| ||||||||| |||| |    
T  20570223 aacgttacagatccggagacatgaatattccgaagacttgaatatagtcatagttgtaagcatagctactttgtcgttttatgctattaacatagatgct 20570322  T
Q  119 gtgagtttgttcgtagattcatc 141  Q
    ||||||||||||| | |||||||    
T  20570323 gtgagtttgttcgcatattcatc 20570345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 395
Target Start/End: Complemental strand, 22708644 - 22708586
Alignment:
Q  337 tgctattttccataaatttagttggtggagtggaggtagaataagagtgctattgaccc 395  Q
    ||||||||||||||||| |||| | ||| ||||||||||||||||||||||| ||||||    
T  22708644 tgctattttccataaatctagtagttggtgtggaggtagaataagagtgctagtgaccc 22708586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 35333756 - 35333895
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt---cata------gacttatatactttgtcagcttatgtta 104  Q
    ||||||||||||||||||||||| ||||| ||||| |||||| | ||||||||||||||   ||||      | | ||  ||||||| |   ||||| ||    
T  35333756 tcatcaacgttgcagatccggagacatgagtattccgaagacataaatatagtcatattagtcatatttgtaggcataggtactttgccgttttatgcta 35333855  T
Q  105 ttaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  35333856 ttaacatggatgatgtgagtttgttcacagattcatcttt 35333895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 9978539 - 9978423
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||| ||||| |||||   |||| | ||||| ||||||||  ||| | ||  ||||||  |   ||||| |||||||||||    
T  9978539 tcatcaacgttgcagatccggagacatgagtattccagagacataaatatcgtcatatttgtaggcgtaagtacttttccgttttatgatattaacatgg 9978440  T
Q  114 atgatgtgagtttgttc 130  Q
    |||||||||||||||||    
T  9978439 atgatgtgagtttgttc 9978423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 25068104 - 25068228
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| || ||  |||| |||||||| ||||||||||||||  ||| | ||  ||| ||| |   ||||| ||||||||  ||||    
T  25068104 tcaacgttgcagatccggagacaagaggattccgaagacttgaatatagtcatatttgtaggcataggtaccttgccgttttatgctattaacactgatg 25068203  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  25068204 atgtgagtttgttcacagattcatc 25068228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 43696119 - 43696177
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| || ||||| ||||| |||||| | ||||||||||||||    
T  43696119 tcatcaacgttgcagatccgaagacatgagtattccgaagacatgaatatagtcatatt 43696177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 4739583 - 4739716
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaata---------tagtcatattcatagacttatatactttgtcagcttatgttatta 107  Q
    |||||||||||||||||||| ||||| ||| |||||||||| ||||         ||||||||||  ||| | || |||||||||    ||||| |||||    
T  4739583 tcaacgttgcagatccggagacatgagtatactgaagacttgaatattgtcacattagtcatatttgtaggcatagatactttgttgttttatgctatta 4739682  T
Q  108 acatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||| |||||||||||||  |||||||||    
T  4739683 acatggatgttgtgagtttgttcacagattcatc 4739716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 17056293 - 17056212
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    |||||||||||||   ||||||| | ||||||| |   ||||| |||||||||| ||| |||||||||||||||||||||||    
T  17056293 aatatagtcatatgtgtagacttttgtactttgccgttttatgctattaacatgaatgttgtgagtttgttcgtagattcat 17056212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 17068740 - 17068659
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    |||||||||||||   ||||||| | ||||||| |   ||||| |||||||||| ||| |||||||||||||||||||||||    
T  17068740 aatatagtcatatgtgtagacttttgtactttgccgttttatgctattaacatgaatgttgtgagtttgttcgtagattcat 17068659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 17095310 - 17095229
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    |||||||||||||   ||||||| | ||||||| |   ||||| |||||||||| ||| |||||||||||||||||||||||    
T  17095310 aatatagtcatatgtgtagacttttgtactttgccgttttatgctattaacatgaatgttgtgagtttgttcgtagattcat 17095229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 43929169 - 43929112
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| ||||||||||| | ||| || |||||||||||||    
T  43929169 tcatccacgttgcagatccggagacatgactattccggagatttaaatatagtcatat 43929112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 13268900 - 13268944
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| | ||||||||||||||||||||||    
T  13268900 ttatgatattaacatggatgttatgagtttgttcgtagattcatc 13268944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 13878787 - 13878743
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  13878787 ttatggtattaacatggatgatgtgagtttgttcacagattcatc 13878743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 14018912 - 14018868
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  14018912 ttatggtattaacatggatgatgtgagtttgttcacagattcatc 14018868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 31271651 - 31271751
Alignment:
Q  44 tattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatctt 143  Q
    |||||| || |||| || |||||||||||  ||| | |||||| | || ||  ||||| |||||||||||||||||| |||||||| | |||||||||||    
T  31271651 tattctcaaaacttgaagatagtcatatttgtaggcatatatattatgccattttatgctattaacatggatgatgttagtttgtttgaagattcatctt 31271750  T
Q  144 t 144  Q
    |    
T  31271751 t 31271751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 32015502 - 32015562
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| ||||||||||||||| |||| ||||| |||||   |||||||||||||||||||||    
T  32015502 catcgtcaacgttgcagatctggagacatgaatattccagagactttaatatagtcatatt 32015562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 38384327 - 38384211
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||| |||||||||||||| |||||  |||| | |||||| |||||||||||||| |||| | ||  ||| ||| |   ||| | |||||||||||    
T  38384327 tcatcaacattgcagatccggagacatgaggattccggagacttaaatatagtcatatttataggcataggtaccttgccgttttaggctattaacatgg 38384228  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| | |||||||||||    
T  38384227 atgctctgagtttgttc 38384211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 41797922 - 41797982
Alignment:
Q  81 tatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||| |   ||||| ||||||||||||||||||||||||||||  |||||||||    
T  41797922 tatatactttgccgttttatgctattaacatggatgatgtgagtttgttcacagattcatc 41797982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 43696211 - 43696255
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||    
T  43696211 ttatgatattaacatggatgatgtgagtttgttcatcgattcatc 43696255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 130
Target Start/End: Complemental strand, 7072790 - 7072719
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||||||||||||  ||| | ||||||||||| |   ||||| |||||||||||||| |||||||||||||    
T  7072790 aatatagtcatatttgtaggcatatatactttgccgttttatgctattaacatggatgttgtgagtttgttc 7072719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 8064653 - 8064598
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||||||  |||| ||||  |||||||| ||||||||||||||    
T  8064653 tcaacgttgcagatccggagatatgattatttcgaagacttgaatatagtcatatt 8064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 9715329 - 9715286
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||  |||| ||||||||||||||||||||||||    
T  9715329 tatgttattaacaaagatgttgtgagtttgttcgtagattcatc 9715286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 11931200 - 11931243
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    ||||| |||||||||||||| |||||||||||||| ||||||||    
T  11931200 ttatgctattaacatggatgttgtgagtttgttcgcagattcat 11931243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 17118600 - 17118557
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||    
T  17118600 ttatgctattaacatgaatgttgtgagtttgttcgtagattcat 17118557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 17267993 - 17267938
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||| ||  |||| ||||| |||||||| ||||||||||||||    
T  17267993 tcaacgttgcagatccgtagaaatgagtattccgaagacttgaatatagtcatatt 17267938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 25508978 - 25508935
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| ||| ||||||||||||||||| |||||||||    
T  25508978 tatgttattaacttgggtgatgtgagtttgttcgcagattcatc 25508935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 31580544 - 31580501
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||    
T  31580544 tatgctattaacttggatgatgtgagtttgttcgcagattcatc 31580501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 44942540 - 44942595
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||| || ||||| ||||| | |||||| ||||||||||||||    
T  44942540 tcaacgttgcagatccgaagacatgagtattccggagacttgaatatagtcatatt 44942595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 45035312 - 45035359
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||| ||||||||||||||  |||||||||||| |||||||||||||    
T  45035312 ttatgctattaacatggatgtcgtgagtttgttcatagattcatcttt 45035359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 141
Target Start/End: Original strand, 6174009 - 6174051
Alignment:
Q  99 atgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||| |||||| |||||||||||||| |||||||||    
T  6174009 atgttattaacttggatgttgtgagtttgttcgcagattcatc 6174051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 45693902 - 45693856
Alignment:
Q  83 tatactttgtcagcttatgttattaacatggatgatgtgagtttgtt 129  Q
    ||||||||||||  ||||| ||||||||| |||||||||||||||||    
T  45693902 tatactttgtcattttatgctattaacatagatgatgtgagtttgtt 45693856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 106567 - 106616
Alignment:
Q  81 tatatactttgtcagcttatgttattaacatggatgatgtgagtttgttc 130  Q
    |||||||||||||   | ||| ||||||||||||||||||||||||||||    
T  106567 tatatactttgtcgtttcatgctattaacatggatgatgtgagtttgttc 106616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 4878522 - 4878489
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    |||||||||||||||||||| |||||||||||||    
T  4878522 ttatgttattaacatggatgctgtgagtttgttc 4878489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 4904055 - 4904014
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattca 139  Q
    |||| ||||||| |||||| ||||||||||||||||||||||    
T  4904055 tatgctattaacttggatgttgtgagtttgttcgtagattca 4904014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 5754625 - 5754658
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  5754625 ttatgctattaacatggatgatgtgagtttgttc 5754658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 7640225 - 7640168
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| |||| |||||| | ||| || |||||||||||||    
T  7640225 tcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatat 7640168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 25237117 - 25237084
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    |||||||||||||||||||| |||||||||||||    
T  25237117 ttatgttattaacatggatgttgtgagtttgttc 25237084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 28261695 - 28261650
Alignment:
Q  85 tactttgtcagcttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||||||||  ||||||||||| |||||||| |||||||||||||    
T  28261695 tactttgtcattttatgttattaccatggatgttgtgagtttgttc 28261650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 44589215 - 44589248
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  44589215 ttatgctattaacatggatgatgtgagtttgttc 44589248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 4426530 - 4426471
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| |||||||||||||||||||  ||||| ||||| | |||||| ||||||||||||||    
T  4426530 catcgtcaacgttgcagatccggatacatgaatattc-ggagacttgaatatagtcatatt 4426471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 5172043 - 5172167
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||| |||||||||| ||||||  ||| || | |||| ||||| |||||| | |||| ||||| ||||||||    |||||| |||||||||||||    
T  5172043 tcaacgttccagatccggatgcatgaaaattatggacacttgaatattgtcataattataggcttatgtactttgtttttttatgtcattaacatggatg 5172142  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     | |||| ||| ||| | |||||||    
T  5172143 ttatgagattgctcgcaaattcatc 5172167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 12890895 - 12890851
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  12890895 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 12890851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 13548698 - 13548654
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||  | ||||||||||||||||||||||    
T  13548698 ttatgctattaacatggatactctgagtttgttcgtagattcatc 13548654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 16136421 - 16136465
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||    
T  16136421 ttatgctattaacatggataatgtgagtttgttcacagattcatc 16136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 27096032 - 27096076
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  27096032 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 27096076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 37994474 - 37994530
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatctttaacgaattta 154  Q
    |||| ||||||| ||| || |||||||||||||| |||||||||||| |||| ||||    
T  37994474 tatgctattaacttgggtgttgtgagtttgttcgcagattcatcttttacgatttta 37994530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 38535082 - 38535038
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  38535082 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 38535038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 43473923 - 43473879
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  43473923 ttatgctattaacatggatgctgtgagtttgttcacagattcatc 43473879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 44942629 - 44942673
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  44942629 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 44942673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 21552324 - 21552197
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||||| |||||||||||||  | ||| |||||||||||||||||  ||| ||||| |||||||     |||||||||||||||||    
T  21552324 tcatcaacgttgcagatccgaaggcatgactatttcggagattttaatatagtcatatttgtaggcttatgtactttgctgttttatgttattaacatgg 21552225  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||||| ||||||||||    
T  21552224 atgatgtgagtttgttcatagattcatc 21552197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 9137204 - 9137328
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||| | ||||| | |||||| ||| ||||||||||  ||||| ||  ||||||||||  ||||| ||||||||||||||    
T  9137204 tcaacgttgcagatccggagacataagtattccggagacttgaatttagtcatatttgtagacataagtactttgtcattttatgctattaacatggatg 9137303  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||||| |||||||    
T  9137304 atgtgagtttgttcgtaaattcatc 9137328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 29804550 - 29804360
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    |||||||||||||||||||||||||||||| |||||| | | | || ||||||||||||||  ||| ||||| ||||||| |   ||||| |||||||||    
T  29804550 catcatcaacgttgcagatccggaggcatggctattccggatatttaaatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacat 29804451  T
Q  112 ggatgatgtgagtttgttcgtagattcatc---------tttaacgaatttatatt-gatcgatgtactctgtcaacttgaatgaatgaat 192  Q
    |||||  ||||||||||||  |||||||||         |||| ||||||| ||||  ||||||||||||| |||| ||||||||||||||    
T  29804450 ggatgtcgtgagtttgttcacagattcatcatttttgtttttagcgaatttgtattatatcgatgtactctatcaatttgaatgaatgaat 29804360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 14733934 - 14733818
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||| |||||||||||||||||||| ||||| ||| | |||||||||||||||||  ||| |||||  |||||| ||  ||||| |||||||||||    
T  14733934 tcatcaacattgcagatccggaggcatgattattccgaaaattttaatatagtcatatttgtaggcttatgcactttgccattttatgctattaacatgg 14733835  T
Q  114 atgatgtgagtttgttc 130  Q
    |||  ||||||||||||    
T  14733834 atgtcgtgagtttgttc 14733818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 45482318 - 45482442
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||| ||||| | |||||| ||||||||||||||  |||   || ||||||||||   ||||| ||||||||||||||    
T  45482318 tcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcatatttgtaggtatagatactttgtcgttttatgctattaacatggatg 45482417  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  45482418 ttgtgagtttgttcacagattcatc 45482442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 21329165 - 21328979
Alignment:
Q  16 atcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggat 115  Q
    ||||||||||||||||||| |||||||||||||   | | |||||||||||||||||  ||| ||| |  |||||| |   ||||| |||||||||||||    
T  21329165 atcaacgttgcagatccgggggcatgactattccagatattttaatatagtcatatttgtaggcttgtgcactttgccgttttatgctattaacatggat 21329066  T
Q  116 gatgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaat 192  Q
    | ||||| |||||||  |||||||||         |||| ||||||| ||||| ||||||||||||| |||| ||||||||||||||    
T  21329065 gttgtgaatttgttcacagattcatcctttttgtttttagcgaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 21328979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 43483833 - 43483963
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||| ||    ||||| | |||| | |||||||||||||   ||| |||  ||||||||||   ||||| |||||||||||    
T  43483833 tcatcaacgttgcagatccggagacaaaggtattccggagacataaatatagtcatatgtgtaggctttaatactttgtcgttttatgctattaacatgg 43483932  T
Q  114 atgatgtgagtttgttcgtagattcatcttt 144  Q
    |||||||||||||||||  ||||||||||||    
T  43483933 atgatgtgagtttgttcacagattcatcttt 43483963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 45949545 - 45949471
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttg 91  Q
    |||||||||||||||||||||||||||||||| | ||| |||||||||||||||||  ||| ||||| |||||||    
T  45949545 tcaacgttgcagatccggaggcatgactattccggagattttaatatagtcatatttgtaggcttatgtactttg 45949471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 37375913 - 37375800
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||||||| |||| ||||| ||||| | |||| | ||||||||||||||  ||| | ||| |||||||||   ||||| ||||||||||||||    
T  37375913 tcaacgttgcagatctggagacatgagtattcaggagacatgaatatagtcatatttgtaggcatatgtactttgtcgttttatgctattaacatggatg 37375814  T
Q  117 atgtgagtttgttc 130  Q
     |||||||||||||    
T  37375813 ctgtgagtttgttc 37375800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 46918652 - 46918771
Alignment:
Q  22 gttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtg 121  Q
    ||||||||||| ||| ||||| |||| || |||||| |||||||||||||  |||| ||| | ||||||| |   ||||| |||||||||| ||| ||||    
T  46918652 gttgcagatccagagacatgagtattttggagacttgaatatagtcatatgtataggcttttgtactttgccgttttatgctattaacatgtatgctgtg 46918751  T
Q  122 agtttgttcgtagattcatc 141  Q
    |||||||||| |||||||||    
T  46918752 agtttgttcgcagattcatc 46918771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 32741008 - 32741130
Alignment:
Q  19 aacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgat 118  Q
    ||||||||| |||||||| ||||| |||||   |||| | ||||||||||||||  ||| | ||||||||||||    ||||| |||||||||||||| |    
T  32741008 aacgttgcaaatccggagacatgagtattccagagacataaatatagtcatatttgtaggcatatatactttgttgttttatgctattaacatggatgtt 32741107  T
Q  119 gtgagtttgttcgtagattcatc 141  Q
    ||||||||||||  |||||||||    
T  32741108 gtgagtttgttcacagattcatc 32741130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 2532186 - 2532302
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||||||||||||| |||||| | ||| ||||||||||| |||||  ||| || || ||||||  |   ||||| | ||||||||     
T  2532186 tcatcaacgttgcagatccggaggcatggctattccggagaatttaatatagttatatttgtaggctaatgtacttttccgttttatgcttttaacatgc 2532285  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| |||||||||||||    
T  2532286 atgttgtgagtttgttc 2532302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 4621243 - 4621126
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatata--gtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    |||||||| |||||||||||||| ||||| ||||  | |||||| ||||||  ||||||||  ||| | ||| ||||||||||  ||||| |||||||||    
T  4621243 tcatcaacattgcagatccggagacatgagtatttcggagacttaaatatatagtcatatttgtaggcatatgtactttgtcattttatgctattaacat 4621144  T
Q  112 ggatgatgtgagtttgtt 129  Q
    | ||| ||||||||||||    
T  4621143 gaatgttgtgagtttgtt 4621126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 30992696 - 30992635
Alignment:
Q  10 gacatcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||||||| |||||||||||||||||||||| |||||| | ||| || |||||||||||||    
T  30992696 gacatcatccacgttgcagatccggaggcatggctattccggagatttaaatatagtcatat 30992635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 47156629 - 47156746
Alignment:
Q  13 atcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatg 112  Q
    |||||| ||||||||||||||||  ||||  ||||| | ||| || |||||||||||||   ||||| | | |||||||||   ||||||||||||||||    
T  47156629 atcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtagacatttgtactttgtcgttttatgttattaacatg 47156728  T
Q  113 gatgatgtgagtttgttc 130  Q
    |||| ||||||| |||||    
T  47156729 gatgttgtgagtctgttc 47156746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 5684611 - 5684731
Alignment:
Q  10 gacatcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaac 109  Q
    |||||| |||||||| ||||||||||| ||  |||||||   |||| | |||||||||||||| |||| | ||| ||||||| |   ||||| |||||||    
T  5684611 gacatcgtcaacgttacagatccggagacaacactattccagagacatgaatatagtcatatttataggcatatgtactttgccgttttatgctattaac 5684710  T
Q  110 atggatgatgtgagtttgttc 130  Q
    ||||||| ||| |||||||||    
T  5684711 atggatgctgtaagtttgttc 5684731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 5709661 - 5709781
Alignment:
Q  10 gacatcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaac 109  Q
    |||||| |||||||| ||||||||||| ||  |||||||   |||| | |||||||||||||| |||| | ||| ||||||| |   ||||| |||||||    
T  5709661 gacatcgtcaacgttacagatccggagacaacactattccagagacatgaatatagtcatatttataggcatatgtactttgccgttttatgctattaac 5709760  T
Q  110 atggatgatgtgagtttgttc 130  Q
    ||||||| ||| |||||||||    
T  5709761 atggatgctgtaagtttgttc 5709781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 33530344 - 33530216
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||| ||| ||||| ||||  | |||||| ||||||||||||    |||  || | || |||| |   |||||||||||||||||    
T  33530344 tcatcaacgttgcagatcctgagacatgagtatttcggagacttgaatatagtcataagtgtaggtttttgtattttgccgtgttatgttattaacatgg 33530245  T
Q  114 atgatgtgagtttgttcgtagattcatct 142  Q
    ||| |||||||||||||  ||||||||||    
T  33530244 atgctgtgagtttgttcacagattcatct 33530216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 44482740 - 44482627
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatg----ttattaacatg 112  Q
    |||||||||||||||||||| ||||| ||||| | |||| ||||||||||||||||  ||| | ||| ||||||| |   |||||     ||||||||||    
T  44482740 tcaacgttgcagatccggagacatgagtattccggagacattaatatagtcatatttgtaggcatatgtactttgccgttttatgctatatattaacatg 44482641  T
Q  113 gatgatgtgagttt 126  Q
    ||||||||||||||    
T  44482640 gatgatgtgagttt 44482627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 25531698 - 25531825
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||| ||||| ||| ||||| ||||||  | |||| ||||||||||||||  ||| | || ||||| |||  | ||||| |||||||||||    
T  25531698 tcatcaacgttgctgatcctgagacatgaatattctacatacttgaatatagtcatatttgtaggcatagatactctgttggtttatgctattaacatgg 25531797  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| |||  ||||||||| | |||||||    
T  25531798 atgttgttggtttgttcgcaaattcatc 25531825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 35496064 - 35496021
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
T  35496064 tatgctattaacttggatgatgtgagtttgttcgtagattcatc 35496021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 45457423 - 45457368
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||||| |||| | ||||||||||||||    
T  45457423 tcaacgttgcagatccggagacatgagtattctggagacatgaatatagtcatatt 45457368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 3266640 - 3266761
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||| |||||||||| ||||| || |  | |||||| ||||||||||||||  ||| | ||  |||||||||   ||||| ||||||||||   |    
T  3266640 tcaacgttgtagatccggagacatgagtacttcggagacttaaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatg---g 3266736  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||| ||||||||||    
T  3266737 atgtgagtttgttcatagattcatc 3266761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 6667704 - 6667782
Alignment:
Q  63 tagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||  ||| | ||| ||||||| ||  ||||| |||||||||||||| ||||||||||||| ||||||||||    
T  6667704 tagtcatatttgtaggcatatgtactttgccattttatgctattaacatggatgttgtgagtttgttcatagattcatc 6667782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 144
Target Start/End: Complemental strand, 22379582 - 22379448
Alignment:
Q  10 gacatcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaac 109  Q
    |||||| ||||||||||||||||| || ||||| |||||   |||||| |||||||||||||    ||  || | ||||||| |   ||||| |||||||    
T  22379582 gacatcttcaacgttgcagatccgaagacatgagtattccagagacttgaatatagtcatatgtgcaggtttttttactttgccgttttatgctattaac 22379483  T
Q  110 atggatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||| || |||||| |||||| |||||||||||||    
T  22379482 atggttgttgtgagattgttcttagattcatcttt 22379448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 46025871 - 46025789
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  ||| | ||| |||||||||   ||||| |||||||||||||| |||||||||||||  |||||||||    
T  46025871 aatatagtcatatttgtaggcatatgtactttgtcgttttatgctattaacatggatgctgtgagtttgttcaaagattcatc 46025789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 5238277 - 5238310
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||||||||||||||||||||||||||||||||    
T  5238277 ttatgttattaacatggatgatgtgagtttgttc 5238310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 17473619 - 17473495
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||| |||||||| ||| ||||| ||||| | ||||   ||||||||||||||  ||  | ||| ||||||| ||  ||||  ||||||||||||||    
T  17473619 tcaacgtcgcagatccagagacatgagtattccggagacaggaatatagtcatatttgtaagcatatgtactttgccattttatcctattaacatggatg 17473520  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  17473519 ttgtgagtttgttcacagattcatc 17473495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 17579595 - 17579719
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||| |||||||| ||| ||||| ||||| | ||||   ||||||||||||||  ||  | ||| ||||||| ||  ||||  ||||||||||||||    
T  17579595 tcaacgtcgcagatccagagacatgagtattccggagacaggaatatagtcatatttgtaagcatatgtactttgccattttatcctattaacatggatg 17579694  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  17579695 ttgtgagtttgttcacagattcatc 17579719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 32643311 - 32643355
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||||    
T  32643311 ttatgctattaacatggaagatgtgagtttgttcatagattcatc 32643355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 35135031 - 35134943
Alignment:
Q  53 gactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||   || |||| | |||||||||   |||||||||||  ||||||| |||||||||||||| |||||||||    
T  35135031 gacttgaatatagtcatatgtgtaaacttttgtactttgtcgttttatgttattagtatggatgttgtgagtttgttcgcagattcatc 35134943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 35141449 - 35141405
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||||||||||| |||||||||||||| |||||||||    
T  35141449 ttatattattaacatggatgttgtgagtttgttcgcagattcatc 35141405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 36579119 - 36579075
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  36579119 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 36579075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 39544826 - 39544782
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||||  |||||||||||||| |||||||||    
T  39544826 ttatgttattaacatggatattgtgagtttgttcgcagattcatc 39544782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 41288299 - 41288343
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  41288299 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 41288343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 21954691 - 21954636
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||| | | |||| ||||||||||||||    
T  21954691 tcaacgttgcagatccggagtcatgagtattccggacacttgaatatagtcatatt 21954636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 29352474 - 29352529
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||||||  |||| |||||  ||||||| ||||||||||||||    
T  29352474 tcaacgttgcagatccggagagatgagtattccaaagacttgaatatagtcatatt 29352529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 37714807 - 37714854
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||||||||| ||||||||| |||||||||||||| | ||||||||||    
T  37714807 ttatgttatttacatggatgttgtgagtttgttcgcatattcatcttt 37714854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 37890276 - 37890169
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatga 186  Q
    ||||||| | ||||||||||||||||||||||||| | |||||||         ||||||||||||  |||| ||||||||||| | |||| ||||||||    
T  37890276 ttatgttgtcaacatggatgatgtgagtttgttcgcaaattcatcttatttgtttttaacgaatttgcattgtatcgatgtactatatcaatttgaatga 37890177  T
Q  187 atgaatat 194  Q
    ||||||||    
T  37890176 atgaatat 37890169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 44681713 - 44681832
Alignment:
Q  22 gttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtg 121  Q
    ||||||||| ||||| ||||  |||||   |||||| || ||||||||||   ||||||| | |||||||||   ||| | |||||||||||||| ||||    
T  44681713 gttgcagattcggagacatgggtattccagagacttaaaaatagtcatatatgtagacttttgtactttgtcgttttaagctattaacatggatgttgtg 44681812  T
Q  122 agtttgttcgtagattcatc 141  Q
     ||||||||| |||||||||    
T  44681813 cgtttgttcgcagattcatc 44681832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 46339242 - 46339285
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| ||||||||||||||||||||  |||||||||    
T  46339242 tatgttattaacttggatgatgtgagtttgttcacagattcatc 46339285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 20206208 - 20206242
Alignment:
Q  160 atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||||||||||||||||| ||||||||||||||||    
T  20206208 atcgatgtactctgtcaatttgaatgaatgaatat 20206242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 26161304 - 26161342
Alignment:
Q  103 tattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  26161304 tattaacatggatgatgtgagtttgttcacagattcatc 26161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 127
Target Start/End: Complemental strand, 33095878 - 33095848
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttg 127  Q
    |||||||||||||||||||||||||||||||    
T  33095878 ttatgttattaacatggatgatgtgagtttg 33095848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 42408525 - 42408571
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  42408525 tatgctattaacttggatgctgtgagtttgttcgcagattcatcttt 42408571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 43098825 - 43098943
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||| |||||||| |  ||| ||||| ||||||| |||| | |||||||||||||| |||||||| | |  ||||||   |||||||||||||||| |||    
T  43098825 tcaatgttgcagagctagagacatgagtattctgtagacatgaatatagtcatatttatagacttttgtgttttgtcgttttatgttattaacatgaatg 43098924  T
Q  117 atgtgagtttgttcgtaga 135  Q
     |||||  ||||| |||||    
T  43098925 ttgtgatcttgtttgtaga 43098943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 9785660 - 9785693
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  9785660 ttatgctattaacatggatgatgtgagtttgttc 9785693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 22747287 - 22747254
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  22747287 ttatgctattaacatggatgatgtgagtttgttc 22747254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 144
Target Start/End: Original strand, 25112848 - 25112877
Alignment:
Q  115 tgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||||||||||||||||||||||||||||    
T  25112848 tgatgtgagtttgttcgtagattcatcttt 25112877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 36350416 - 36350528
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||| ||||| ||| | ||||||| |||||| ||||| || ||||   |||  || | ||||||||||  ||||| ||||||||||||||    
T  36350416 tcaacgttgcagattcggagacat-agtattctggagacttgaatatggttatatgtgtaggtttttgtactttgtcattttatgctattaacatggatg 36350514  T
Q  117 atgtgagtttgttc 130  Q
     |||||| ||||||    
T  36350515 ttgtgaggttgttc 36350528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 41748313 - 41748280
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  41748313 ttatgctattaacatggatgatgtgagtttgttc 41748280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 43398690 - 43398735
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatct 142  Q
    |||||||||||||||| ||| | |||||||||| ||||||||||||    
T  43398690 ttatgttattaacatgaatgttatgagtttgttggtagattcatct 43398735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 134931 - 134887
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||||| ||||||  ||||| ||||||||||    
T  134931 ttatgttattaacatggatgttgtgagcctgttcatagattcatc 134887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 6646387 - 6646343
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| ||||||||| ||||| ||||||||    
T  6646387 ttatgctattaacatggatgttgtgagtttattcgtcgattcatc 6646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 9137734 - 9137778
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| ||| |||||||||| |||||||||    
T  9137734 ttatgctattaacatggatgttgtaagtttgttcgcagattcatc 9137778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 10624134 - 10624170
Alignment:
Q  105 ttaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||||||||||||| | |||||||||    
T  10624134 ttaacatggatgatgtgagtttgtttgcagattcatc 10624170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 11833426 - 11833474
Alignment:
Q  147 cgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    ||||||| ||||| ||||||||||||| |||| ||||||||||||||||    
T  11833426 cgaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatat 11833474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 17508982 - 17508938
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  17508982 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 17508938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 17544232 - 17544276
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  17544232 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 17544276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 25854942 - 25854891
Alignment:
Q  142 tttaacgaatttatattgatcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||| |||||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  25854942 tttagcgaatttacatt-atcgatgtactctatcaatttgaatgaatgaatat 25854891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 28015685 - 28015729
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  28015685 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 28015729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 32587317 - 32587273
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||| | |||||||    
T  32587317 ttatgatattaacatggatgttgtgagtttgttcgcatattcatc 32587273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 40761837 - 40761897
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| |||||||| ||||||||||| ||||| ||||| | |||| | ||||||||||||||    
T  40761837 catcgtcaacgttacagatccggagacatgagtattccggagacataaatatagtcatatt 40761897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 40761931 - 40761975
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||||| |||||||||||  |||||||||    
T  40761931 ttatgctattaacatggatgatatgagtttgttcacagattcatc 40761975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 42603491 - 42603447
Alignment:
Q  148 gaatttatattg-atcgatgtactctgtcaacttgaatgaatgaa 191  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||    
T  42603491 gaatttatattgtatcgatgtactctatcaatttgaatgaatgaa 42603447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 42644998 - 42645042
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  42644998 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 42645042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 9e-28; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 14530784 - 14530597
Alignment:
Q  15 catcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgga 114  Q
    |||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||| ||| | ||||||| |   ||||| ||||||||||||    
T  14530784 catcaacgttgcagatccggaggcatgactattccggagattttaatatagtcatatttataggcttgtgtactttgccgttttatgctattaacatgga 14530685  T
Q  115 tgatgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaat 192  Q
    || |||||||||| ||  |||||||||         ||||| |||| | ||||| ||||||||||||| |||| ||||||||||||||    
T  14530684 tgttgtgagtttgctcacagattcatcatttttgtttttaatgaatctgtattgcatcgatgtactctatcaatttgaatgaatgaat 14530597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 32062039 - 32062155
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||||||||||||| ||||||  |||| |||||||||||||||||  ||  |||||  ||||||||   ||||| |||||||||||    
T  32062039 tcatcaacgttgcagatccggaggcatggctattccaaagattttaatatagtcatatttgtatgcttatgcactttgtcgttttatgctattaacatgg 32062138  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| |||||||||||||    
T  32062139 atgttgtgagtttgttc 32062155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 12357039 - 12357170
Alignment:
Q  13 atcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatg 112  Q
    ||||||||||||||||||| ||| |||||||||||| | |||||||||||||||||||||  |||  |||| |||| || ||  ||||  ||||||||||    
T  12357039 atcatcaacgttgcagatcaggatgcatgactattccggagactttaatatagtcatatttgtaggtttatgtactctgccaatttattctattaacatg 12357138  T
Q  113 gatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||| |||||||||||||  | ||||||||||    
T  12357139 gatgttgtgagtttgttcacaaattcatcttt 12357170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 10148199 - 10148323
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||| ||||  | |||||| ||||||||||||||  ||| | ||  |||||||||   ||||| ||||||||||||||    
T  10148199 tcaacgttgcagatccggagacatgagtatttcggagacttaaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatggatg 10148298  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  10148299 atgtgagtttgttcacagattcatc 10148323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 26673568 - 26673521
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26673568 ttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 26673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 27534281 - 27534154
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||| |||||||  | ||||||||| | ||| |||||||||||||||||  ||| ||||| ||||||| |   ||||| ||||||||||     
T  27534281 tcatcaacgttgcatatccggaaacgtgactattccgtagattttaatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacatga 27534182  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| |||||||||||||  |||||||||    
T  27534181 atgttgtgagtttgttcacagattcatc 27534154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 37720085 - 37720268
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||| ||| |||   ||||| | |||||| |||||||||||||   ||| ||| | |||||||||   ||||| |||||| ||||    
T  37720085 tcatcaacgttgcagatccagagacataggtattccgtagacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaatatgg 37720184  T
Q  114 atgatgtgagtttgttcgtagattcatc---------tttaacgaatttatattgatcgatgtactctgtcaacttgaatgaat 188  Q
    ||| || ||||||||||| |||||||||         |||| |||||||| ||||||||||||||||| |||| ||||||||||    
T  37720185 atgctgcgagtttgttcggagattcatcctttttatttttagcgaatttacattgatcgatgtactctatcaatttgaatgaat 37720268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 18190710 - 18190594
Alignment:
Q  24 tgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgag 123  Q
    |||||||| ||||||||| |||||| ||| | |||||||||||||||||  ||| ||| | |||||||||   ||||| |||||| ||||||| ||||||    
T  18190710 tgcagatctggaggcatggctattccgaaaattttaatatagtcatatttgtaggcttgtgtactttgtcgttttatgctattaatatggatgttgtgag 18190611  T
Q  124 tttgttcgtagattcat 140  Q
    |||||||  ||||||||    
T  18190610 tttgttcacagattcat 18190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 3028269 - 3028363
Alignment:
Q  22 gttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||| |||| ||| ||||| ||||||| |||||| |||||||||||||   ||||||| | ||||||||||  ||||||||||||||||||||    
T  3028269 gttgcatatccagagacatgagtattctggagacttgaatatagtcatatgtgtagacttttgtactttgtcattttatgttattaacatggatg 3028363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 1215210 - 1215094
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||| |||||| ||||||||   ||| |||||| |||| | ||   ||| ||||| |||||||||   ||||||||||||||| |    
T  1215210 tcatcaacgttgcagatcccgaggcaggactattccagagattttaatgtagttacatatgtaggcttatgtactttgtcgttttatgttattaacattg 1215111  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| |||||||||||||    
T  1215110 atgttgtgagtttgttc 1215094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 3925556 - 3925432
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||||||  |||| ||||| ||||| | |||||| |||||| ||||||   ||| |||   ||||||| |   ||||||||||||||||||||    
T  3925556 tcaacgttgcagatttggagacatgagtattccggagacttaaatataatcatatgtgtaggctttagtactttgccgttttatgttattaacatggatg 3925457  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  3925456 atgtgagtttgttcacagattcatc 3925432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 11298629 - 11298504
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||| ||||||||| |||||||| ||||  ||||||||||| |||||||  ||||||||  |||  |||| ||||||||    ||||| |||||||||||    
T  11298629 tcataaacgttgcatatccggagacatggttattctgaagattttaata--gtcatatttgtagtattatgtactttgttgttttatgctattaacatgg 11298532  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| ||||||||||||| || |||||||    
T  11298531 atgttgtgagtttgttcatatattcatc 11298504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 32256590 - 32256463
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||| || |  ||||| | |||||| |||||||||||||   | | |||   ||||||| |   |||||||||||| ||||    
T  32256590 tcatcaacgttgcagatccggagacaagggtattccggagacttaaatatagtcatatgtgtcggctttagtactttgccgttttatgttattaatatgg 32256491  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||  |||||||||    
T  32256490 atgatgtgagtttgttcacagattcatc 32256463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 32920889 - 32921016
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||| ||||||||  ||||||   | | |||||||||||||| ||  ||| ||||| |||| ||||   || || |||||||||||    
T  32920889 tcatcaacgttgcagatctggaggcattgctattccagatattttaatatagtcatgtttgtaggcttatgtactatgtcgttttgtgctattaacatgg 32920988  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| |||||||||||||  |||||||||    
T  32920989 atgttgtgagtttgttcagagattcatc 32921016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 2025104 - 2024966
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat---tca------tagacttatatactttgtcagcttatgt 102  Q
    |||| |||||||||||||||||||| ||||| ||||| | |||||| |||||||||||||   |||      ||||| || |||||||| |   |||||     
T  2025104 catcgtcaacgttgcagatccggagacatgattattccggagacttaaatatagtcatattagtcatatttgtagacatagatactttgccgttttatgc 2025005  T
Q  103 tattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||| |||||||||||||  |||||||||    
T  2025004 tattaacatggatgttgtgagtttgttcacagattcatc 2024966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 141
Target Start/End: Complemental strand, 12244047 - 12243958
Alignment:
Q  52 agactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||| |||||||| ||||   ||| ||| | |||||||||   |||||||||||||||||||| |||||||||||||| |||||||||    
T  12244047 agacttgaatatagttatatgtgtaggcttttgtactttgtcgttttatgttattaacatggatgttgtgagtttgttcgcagattcatc 12243958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 13576080 - 13575951
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    |||| |||| |||||||||||||||  |||| |||||   |||||| ||||||||| ||||  ||  | ||||||||||||    ||||| |||||||||    
T  13576080 catcttcaatgttgcagatccggagaaatgagtattcctgagacttgaatatagtcgtatttttaagcatatatactttgttgttttatgctattaacat 13575981  T
Q  112 ggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| | |||||||    
T  13575980 ggatgttgtgagtttgttcgcaaattcatc 13575951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 16809114 - 16809235
Alignment:
Q  20 acgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatg 119  Q
    ||||||||||||| ||  ||||| ||||| | |||||| |||||||||||||   ||| ||| | ||||||||    ||||||||||||||  |||||||    
T  16809114 acgttgcagatccagaaacatgagtattccggagacttgaatatagtcatatgtgtaggcttctgtactttgttgttttatgttattaacaaagatgatg 16809213  T
Q  120 tgagtttgttcgtagattcatc 141  Q
    ||||||||| || |||||||||    
T  16809214 tgagtttgtacgcagattcatc 16809235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 3204572 - 3204528
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||||||||||||||||||||||  |||||||||    
T  3204572 ttatgttattaacatggatgatgtgagtttgttcaaagattcatc 3204528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 5526051 - 5526111
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||||||||||| |||||  |||||| |||||| |||||| |||||||    
T  5526051 catcatcaacgttgcagatccggagacatgagaattctggagacttgaatatattcatatt 5526111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 16937205 - 16937081
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||  ||| ||||  ||||| | |||||| |||||||||||||   ||| |||   ||||||||    ||||| ||||||||||||||    
T  16937205 tcaacgttgcagatctagagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgttgttttatgctattaacatggatg 16937106  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  16937105 atgtgagtttgttcacagattcatc 16937081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 18197012 - 18196892
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| |||  ||||||  ||||||||||||||||||||||  ||| ||| | ||||||| |   |||||  ||||||||| | |    
T  18197012 tcaacgttgcagatccggagacatcgctattccaaagactttaatatagtcatatttgtagtcttctgtactttgccgttttatgcgattaacatgaacg 18196913  T
Q  117 atgtgagtttgttcgtagatt 137  Q
     || ||||||||||| |||||    
T  18196912 ttgggagtttgttcgcagatt 18196892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 30026762 - 30026702
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| |||||||||||||||||||| ||||| ||||| | |||||| ||||||||||||||    
T  30026762 catcttcaacgttgcagatccggagacatgaatattccggagacttgaatatagtcatatt 30026702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 32778838 - 32778714
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||| ||||||||| |||| ||||| ||||||| |||||| ||||||||||||||  ||| | ||  ||||||| |   ||||| |||||| |||| ||    
T  32778838 tcaactttgcagatctggagacatgagtattctggagacttgaatatagtcatatttgtagccataggtactttgccgttttatgctattaatatggttg 32778739  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||| | |||||||    
T  32778738 ttgtgagtttgttcgcaaattcatc 32778714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 2234345 - 2234290
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||||||||| |||||  ||||| | ||||||||||||||    
T  2234345 tcaacgttgcagatccggaggcatgagtattccaaagacatgaatatagtcatatt 2234290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 11464366 - 11464409
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||| |||||||||||||||||||||||||||||||    
T  11464366 tatgctattaacttggatgatgtgagtttgttcgtagattcatc 11464409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 13977649 - 13977710
Alignment:
Q  10 gacatcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    |||||| ||||||||||||||||||||  |||| ||||||| |||||| |||||| ||||||    
T  13977649 gacatcgtcaacgttgcagatccggagatatgagtattctggagacttgaatataatcatat 13977710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 6219977 - 6219854
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||||||||| |  ||||| |||| || | |||| ||||||||||||||  ||||  ||| |||| |||||  ||||| ||||||||| ||||    
T  6219977 tcaacgttgcagatccgaaaacatgagtattttgtatacttgaatatagtcatatttgtagatatatgtactctgtcactttatgctattaacatagatg 6219878  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    || | | |||||||| |||||||||    
T  6219877 atat-aatttgttcgcagattcatc 6219854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 14600484 - 14600440
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||    
T  14600484 ttatgctattaacatggatgttgtgagtttgttcatagattcatc 14600440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 24700178 - 24700222
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||    
T  24700178 ttatgctattaacatggatgttgtgagtttgttcatagattcatc 24700222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 36033586 - 36033642
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatctttaacgaattta 154  Q
    |||||||||||| |||||| | |||||||||||| ||||| |||||| |||||||||    
T  36033586 tatgttattaacttggatgttatgagtttgttcgcagatttatcttttacgaattta 36033642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 37612979 - 37613023
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  37612979 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 37613023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 41362075 - 41362119
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||    
T  41362075 ttatgctattaacatggatgttgtgagtttgttcatagattcatc 41362119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 19720263 - 19720318
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||| || ||||| ||||| | |||||| ||||||||||||||    
T  19720263 tcaacgttgcagatccgaagacatgagtattccggagacttgaatatagtcatatt 19720318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 194
Target Start/End: Original strand, 5457316 - 5457506
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||| ||||||||||||||||| |||| |||||| | ||| || |||||||||||||   ||| | | | ||| |||||   ||||| ||||| |||||    
T  5457316 tcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtagccatttgtaccttgtcgttttatgctattagcatgg 5457415  T
Q  114 atgatgtgagtttgttcgtagattcatc---------tttaacgaatttatatt-gatcgatgtactctgtcaacttgaatgaatgaatat 194  Q
     || ||||||  |||||  |||||||||         |||| ||||||||||||  ||||||||||||| |||| ||||||||||||||||    
T  5457416 gtgttgtgagcatgttcacagattcatcatttttgtttttagcgaatttatattatatcgatgtactctatcaatttgaatgaatgaatat 5457506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 7579729 - 7579675
Alignment:
Q  18 caacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||| ||| ||||| ||||| | |||||| ||||||||||||||    
T  7579729 caacgttgcagatccagagacatgagtattccggagacttgaatatagtcatatt 7579675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 10952120 - 10952038
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||| ||| |||| | || ||||| |||||  ||||| ||||| |||||||| |||||||||||| | |||||||||    
T  10952120 aatatagtcaaatttataggcatagatactctgtcattttatgctattatcatggatgttgtgagtttgtttgcagattcatc 10952038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 10960125 - 10960043
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||| ||| |||| | || ||||| |||||  ||||| ||||| |||||||| |||||||||||| | |||||||||    
T  10960125 aatatagtcaaatttataggcatagatactctgtcattttatgctattatcatggatgttgtgagtttgtttgcagattcatc 10960043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 24790988 - 24790910
Alignment:
Q  63 tagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||  ||| | ||| ||||||| ||  ||||| |||||||||||||| |||||||||||||  |||||||||    
T  24790988 tagtcatatttgtaggcatatgtactttgccattttatgctattaacatggatgttgtgagtttgttcacagattcatc 24790910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 471071 - 471030
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattca 139  Q
    |||||||||||| ||| |||||||| ||||||||||||||||    
T  471071 tatgttattaacttgggtgatgtgattttgttcgtagattca 471030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 4757491 - 4757524
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    |||||||||||||||||||| |||||||||||||    
T  4757491 ttatgttattaacatggatgttgtgagtttgttc 4757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 5989896 - 5989985
Alignment:
Q  52 agactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||| |||||||||||||   ||| ||| | |||||||||   ||||| |||||||||| ||  |||||||||||||| |||||||||    
T  5989896 agacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatgaatattgtgagtttgttcgcagattcatc 5989985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 7579573 - 7579528
Alignment:
Q  150 atttatattg-atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  7579573 atttatattgtatcgatgtactctatcaatttgaatgaatgaatat 7579528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 12248497 - 12248464
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||||||||||||||||||||| ||||||||||    
T  12248497 ttatgttattaacatggatgatgcgagtttgttc 12248464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 17693520 - 17693479
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattca 139  Q
    |||||||||||| |||||| |||||||||| |||||||||||    
T  17693520 tatgttattaacttggatgttgtgagtttggtcgtagattca 17693479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 31712862 - 31712829
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    |||||||||||||||||||| |||||||||||||    
T  31712862 ttatgttattaacatggatgctgtgagtttgttc 31712829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 32104706 - 32104649
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| |||| |||||| | ||| || |||||||||||||    
T  32104706 tcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatat 32104649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 3204660 - 3204608
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcat 69  Q
    ||||||||||||||||| || ||||| ||||| |||||| | |||||||||||    
T  3204660 tcaacgttgcagatccgaagacatgagtattccgaagacatgaatatagtcat 3204608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 4429389 - 4429433
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||| |||||||||||||| ||||||| |||| |||||||||    
T  4429389 ttatgtttttaacatggatgatatgagtttcttcgcagattcatc 4429433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 8054668 - 8054620
Alignment:
Q  23 ttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    |||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  8054668 ttgcagatccggagacatggctattccgaagatttaaatatagtcatat 8054620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 9501912 - 9501944
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgtt 129  Q
    |||||||||||||||||||| ||||||||||||    
T  9501912 ttatgttattaacatggatgttgtgagtttgtt 9501944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 17019428 - 17019472
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||| | |||||||    
T  17019428 ttatgctattaacatggatgttgtgagtttgttcgcaaattcatc 17019472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 17549865 - 17549909
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||| | |||||||    
T  17549865 ttatgctattaacatggatgttgtgagtttgttcgcaaattcatc 17549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 18994210 - 18994254
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| ||||| |||||||| |||||||||    
T  18994210 ttatgctattaacatggatgttgtgattttgttcgcagattcatc 18994254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 19489156 - 19489200
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||| ||||||| ||| ||||||||||||||||||||    
T  19489156 ttatgctattaatatggatgttgttagtttgttcgtagattcatc 19489200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 22787833 - 22787877
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  22787833 ttatgctattaacatggatgctgtgagtttgttcacagattcatc 22787877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 23970969 - 23970925
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  23970969 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 23970925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 28296988 - 28296936
Alignment:
Q  20 acgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||  ||||| ||||| | |||||| ||||||||||||||    
T  28296988 acgttgcagatccggacacatgagtattccggagacttgaatatagtcatatt 28296936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 31308402 - 31308454
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcat 69  Q
    ||||||||||||||||||||  |||| |||| || |||||| |||||||||||    
T  31308402 tcaacgttgcagatccggagatatgaatattttggagacttaaatatagtcat 31308454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 38546029 - 38545977
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcat 69  Q
    |||||||||||||||||||| ||| | ||||| | |||||| |||||||||||    
T  38546029 tcaacgttgcagatccggagacataagtattccggagacttgaatatagtcat 38545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 43936966 - 43936922
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  43936966 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 43936922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 9e-28; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 35658400 - 35658273
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||||||||||||| ||||||   ||| |||||||||||||||||  || |||||| ||||||||    ||||| |||||||||||    
T  35658400 tcatcaacgttgcagatccggaggcatgtctattccagagattttaatatagtcatatttgtaaacttatgtactttgttgttttatgctattaacatgg 35658301  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||||| || |||||||    
T  35658300 atgatgtgagtttgttcataaattcatc 35658273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 6082302 - 6082170
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    |||| |||||||||||||||||||  ||||| ||||||| |||||| ||||||||||||||  ||| | ||| ||||||| |   ||||| |||||||||    
T  6082302 catcgtcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctattaacat 6082203  T
Q  112 ggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||| |||||||||||||  ||||||||||||    
T  6082202 ggatgttgtgagtttgttcacagattcatcttt 6082170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 5814591 - 5814718
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||  ||| | || |||||||  ||  ||||| |||||||||||    
T  5814591 tcatcaacgttgcagatccagagacatgagtattctggagacttgaatatagtcatatttgtaggcataaatacttttccattttatgctattaacatgg 5814690  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| |||||||||||||  |||||||||    
T  5814691 atgttgtgagtttgttcacagattcatc 5814718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 23926284 - 23926413
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    ||||||||||||||||||||| ||| ||||||||||| | ||| |||||||||||||||||  ||| ||||| ||||||| |   | ||| |||||||||    
T  23926284 catcatcaacgttgcagatccagagacatgactattccggagattttaatatagtcatatttgtaggcttatgtactttgccgtttgatgctattaacat 23926383  T
Q  112 ggatgatgtgagtttgttcgtagattcatc 141  Q
     |||| |||||||||||||  |||||||||    
T  23926384 agatgttgtgagtttgttcacagattcatc 23926413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 29589227 - 29589036
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||   ||  |||   |||||||||   ||||| ||||||||||||||    
T  29589227 tcaacgttgcagatccggagacatgagtattctggagacttaaatatagtcatatgtgtatgctttagtactttgtcgttttatgctattaacatggatg 29589128  T
Q  117 atgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatattatt 198  Q
    |||||| |||||||  |||||||||         ||||||||||||  |||| ||| ||||||||  |||| ||||||||||||||||||||    
T  29589127 atgtgaatttgttcacagattcatcctttttgtttttaacgaattttcattgcatcaatgtactccatcaatttgaatgaatgaatattatt 29589036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 38944015 - 38943891
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| || || ||||| | |||| | ||||||||||||||  ||| | || ||||||||||   ||||| ||||||||||||||    
T  38944015 tcaacgttgcagatccggagacacgagtattccggagacatgaatatagtcatatttgtaggcataaatactttgtcgttttatgctattaacatggatg 38943916  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    || |||||||||||  |||||||||    
T  38943915 atatgagtttgttcacagattcatc 38943891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 33020796 - 33020681
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||| |||| ||||| ||||| ||||| | ||| |||||||||||||||||  ||| ||||| ||||||||||  ||||| |||||||||||    
T  33020796 tcatcaacgttgtagattcggagacatgattattccggagattttaatatagtcatatttgtaggcttatgtactttgtcattttatgctattaacatgg 33020697  T
Q  114 atgatgtgagtttgtt 129  Q
    |||  |||| ||||||    
T  33020696 atgtcgtgaatttgtt 33020681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 7083679 - 7083555
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||||||| |||| ||||| ||||| | |||| | |||||||||||||| |||| | ||  ||||||| |   ||||| ||||||||||||||    
T  7083679 tcaacgttgcagatctggagacatgagtattccggagacataaatatagtcatatttataggcataggtactttgccgttttatgctattaacatggatg 7083580  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  7083579 ttgtgagtttgttcacagattcatc 7083555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 50981583 - 50981467
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||| |||||| ||||||||  |||||   ||| |||||||||||||||||  ||| ||||| ||||||||    ||||| |||||||||||    
T  50981583 tcatcaacgttgtagatccagaggcatggttattccagagattttaatatagtcatatttgtaggcttatgtactttgttgttttatgatattaacatgg 50981484  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| |||||||||||||    
T  50981483 atgttgtgagtttgttc 50981467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 11817304 - 11817417
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||||||||||| |||||||||||| | ||| ||||||||||||||||   ||| ||||| ||||||| |   ||||  |||||| || ||||    
T  11817304 tcaacgttgcagatccggaagcatgactattccggagattttaatatagtcatatatgtaggcttatgtactttgccgttttattctattaaaatagatg 11817403  T
Q  117 atgtgagtttgttc 130  Q
     |||||||||||||    
T  11817404 ttgtgagtttgttc 11817417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 7060574 - 7060690
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||| ||| ||||| ||||| | |||| | ||||||||||||||  ||| | ||  |||||| ||   ||||| |||||||||||    
T  7060574 tcatcaacgttgcagatccagagacatgagtattccggagacatgaatatagtcatatttgtaggcataggtactttatcgttttatgctattaacatgg 7060673  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| |||||||||||||    
T  7060674 atgttgtgagtttgttc 7060690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 26742330 - 26742206
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||||||| |||  ||||  |||| || |||| | ||||||||||||||  ||| | |||||| |||| |   ||||| ||||||||||||||    
T  26742330 tcaacgttgcagatctggacacatgggtattttggagacatgaatatagtcatatttgtaggcatatatattttgccgttttatgctattaacatggatg 26742231  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  26742230 atgtgagtttgttcacagattcatc 26742206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 36124215 - 36124091
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||  ||||| ||||| | |||| | ||||||||||||||  ||| | ||| | ||||| |   ||||| ||||||||||||||    
T  36124215 tcaacgttgcagatccggaaacatgagtattcgggagacatgaatatagtcatatttgtaggcatatgtgctttgccgatttatgctattaacatggatg 36124116  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  36124115 ttgtgagtttgttcacagattcatc 36124091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 38434847 - 38434958
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||| | ||||  ||||| | |||||| |||||||||||||   ||| |||   ||||||||||  ||||| ||||||||||||||    
T  38434847 tcaacgttgcagatccgg-gacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgtcattttatgctattaacatggatg 38434945  T
Q  117 atgtgagtttgtt 129  Q
    |||||||||||||    
T  38434946 atgtgagtttgtt 38434958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 43157025 - 43157149
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||  ||||| |||||   |||||| |||||||||||||   ||| |||   |||||||||   ||||| ||||||||||||||    
T  43157025 tcaacgttgcagatccggacacatgagtattccatagacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatgctattaacatggatg 43157124  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  43157125 ttgtgagtttgttcacagattcatc 43157149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 477878 - 477755
Alignment:
Q  18 caacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatga 117  Q
    |||| |||||||||||||| ||||| ||||| |||||  | ||||||||||||||  ||| | ||  ||||||| |   ||||| ||||||||||||||     
T  477878 caacattgcagatccggagacatgagtattccgaagaaatgaatatagtcatatttgtaggcgtaggtactttgacgttttatgctattaacatggatgt 477779  T
Q  118 tgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||  |||||||||    
T  477778 tgtgagtttgttcacagattcatc 477755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 14346679 - 14346866
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||  ||||||  |||||| |||||||||||||   ||| |||   ||||||| |   ||||| ||||||||||||||    
T  14346679 tcaacgttgcagatccggagccatgtgtattctagagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatggatg 14346778  T
Q  117 atgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
     |||||||||||||   ||||||||         |||| |||||||  |||| ||||||||||||| |||| ||||||||||||||||    
T  14346779 ctgtgagtttgttcacggattcatcctctttgtttttagcgaattttcattgtatcgatgtactctatcaatttgaatgaatgaatat 14346866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 29257473 - 29257572
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||| ||||| ||||  ||||| ||| |||| |||||||||||||| ||  |||||| ||||||||||  ||| ||||||| ||||||||    
T  29257473 tcaacgttgcagatacggagacatgtgtattccgaatacttgaatatagtcatatttatgtacttatgtactttgtcattttacgttattaccatggatg 29257572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 30202292 - 30202347
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||||    
T  30202292 tcaacgttgcagatccggagacatgattattctggagacttgaatatagtcatatt 30202347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 31522197 - 31522255
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||||||||| ||||| ||||| |||||| | ||||||||||||||    
T  31522197 tcatcaacgttgcagatccggagacatgagtattccgaagacatgaatatagtcatatt 31522255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 51152373 - 51152491
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    |||| ||||||||||||||||||||  |||| ||||| | |||| | ||||||||||||||  ||| |  || ||||||| |   ||||| |||||||||    
T  51152373 catcgtcaacgttgcagatccggagatatgagtattccggagacatgaatatagtcatatttgtaggcaaatgtactttgccgttttatgctattaacat 51152472  T
Q  112 ggatgatgtgagtttgttc 130  Q
    ||||| |||||||||||||    
T  51152473 ggatgttgtgagtttgttc 51152491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 22757348 - 22757472
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||| |||||||| ||||| ||||| | |||| | ||||||||||||||  ||| | ||  ||||| | |   ||||| ||||||||||||||    
T  22757348 tcaacgttgcaaatccggagacatgagtattccggagacatgaatatagtcatatttgtaggcataggtacttagccgttttatgctattaacatggatg 22757447  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  22757448 ttgtgagtttgttcacagattcatc 22757472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 29474194 - 29474070
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||  ||||| | || ||| |||||||||||||   ||| |||   ||||||| |   ||||| ||||||||||||||    
T  29474194 tcaacgttgcagatccggagacatgggtattccggaggcttaaatatagtcatatgtgtagtctttagtactttgccgttttatgctattaacatggatg 29474095  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  29474094 ttgtgagtttgttcacagattcatc 29474070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 32616731 - 32616671
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| |||||||||||||||||||| ||||| ||||| |||||| | ||||||||||||||    
T  32616731 catcgtcaacgttgcagatccggagtcatgattattccgaagacatgaatatagtcatatt 32616671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 45227930 - 45227887
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| |||||| ||||||||||||||||||||||||    
T  45227930 tatgttattaacttggatgttgtgagtttgttcgtagattcatc 45227887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 9284111 - 9284157
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||    
T  9284111 tatgctattatcatggatgttgtgagtttgttcgtagattcatcttt 9284157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 38706599 - 38706553
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  38706599 tatgctattaacttggatgatgtgagtttgttcgcagattcatcttt 38706553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 56172156 - 56172198
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattca 139  Q
    |||||||||||||||||||| |||||||||||||| |||||||    
T  56172156 ttatgttattaacatggatgttgtgagtttgttcgcagattca 56172198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 4622489 - 4622444
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatct 142  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||    
T  4622489 ttatgctattaacatggatgatgtgagtttgttcgcaaattcatct 4622444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 28990549 - 28990666
Alignment:
Q  20 acgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatg 119  Q
    |||||||||||| | || ||||  ||||||| ||||||||||||  ||||||    |||||| | ||||||||    ||||| |||||||||||||| ||    
T  28990549 acgttgcagatctgaagacatgtgtattctggagactttaatattatcatatgtgcagacttttgtactttgttgttttatgctattaacatggatgttg 28990648  T
Q  120 tgagtttgttcgtagatt 137  Q
    |||||||||||| |||||    
T  28990649 tgagtttgttcgcagatt 28990666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 42972283 - 42972340
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| |||||||||||  |||| || |||||||||||||    
T  42972283 tcatccacgttgcagatccggagacatgactattccaaagatttaaatatagtcatat 42972340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 58 - 192
Target Start/End: Original strand, 3673777 - 3673921
Alignment:
Q  58 taatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattc---------atctttaacg 148  Q
    |||||||||||||||  ||| ||| | ||||||| |   ||||| |||||||||||||| |||||||||||||  ||||||         || ||||||     
T  3673777 taatatagtcatatttgtaggcttgtgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcgtcctttttatttttaaca 3673876  T
Q  149 aatttatatt-gatcgatgtactctgtcaacttgaatgaatgaat 192  Q
    ||||||||||  ||||||||||||| |||| ||||||||||||||    
T  3673877 aatttatattacatcgatgtactctatcaatttgaatgaatgaat 3673921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 6912023 - 6912067
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  6912023 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 6912067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 7084283 - 7084327
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  7084283 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 7084327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 27593718 - 27593670
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatctttaa 146  Q
    |||| ||||||| |||||| ||||||||||||| |||||||||||||||    
T  27593718 tatgctattaacttggatgttgtgagtttgttcatagattcatctttaa 27593670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 30416414 - 30416370
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  30416414 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 30416370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 40861266 - 40861310
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||    
T  40861266 ttatgctattaacatggatgatgcgagtttgttcatagattcatc 40861310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 10359437 - 10359390
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatcttta 145  Q
    |||| ||||||| ||||||||||||||||||||| | |||||||||||    
T  10359437 tatgctattaacttggatgatgtgagtttgttcgcaaattcatcttta 10359390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 20887535 - 20887488
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||| |||||||||||||| |||||||||||||  ||||||||||||    
T  20887535 ttatgatattaacatggatgttgtgagtttgttcacagattcatcttt 20887488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 38170029 - 38169898
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagac-ttatatactttgtcagcttatgttattaacatg 112  Q
    |||||||||||||| |||| || |||||| ||||| | |||||| ||||||||||||    ||| | || | |||||||| |  ||||| ||||||||||    
T  38170029 tcatcaacgttgcaaatcctgatgcatgagtattccggagacttgaatatagtcatacgtgtaggctttttctactttgttattttatgctattaacatg 38169930  T
Q  113 gatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||| | ||| |||||||| ||||| ||||||    
T  38169929 gatggtatgaatttgttcgcagatttatcttt 38169898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 44947612 - 44947655
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| |||||| |||||||||||||| |||||||||    
T  44947612 tatgttattaacttggatgttgtgagtttgttcgcagattcatc 44947655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 46829719 - 46829778
Alignment:
Q  81 tatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    |||||||| |||||  |||||||||||||||| ||| |||||||||||| | ||||||||    
T  46829719 tatatactatgtcattttatgttattaacatgaatgttgtgagtttgtttgcagattcat 46829778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 49410423 - 49410466
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| |||||||||||||||||||||  ||||||||    
T  49410423 tatgttattaacttggatgatgtgagtttgttcgctgattcatc 49410466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 53616539 - 53616496
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||    
T  53616539 tatgctattaacttggatgatgtgagtttgttcgcagattcatc 53616496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 6882210 - 6882331
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||| |||     |||||| ||||||||||||||  ||||| || |||||||| |   ||||| ||||   |||||||    
T  6882210 tcaacgttgcagatccggagacatgagtataacagagacttgaatatagtcatatttgtagacataaatactttgccgttttatgctatt---atggatg 6882306  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  6882307 ttgtgagtttgttcagagattcatc 6882331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 11210183 - 11210125
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||||||||| ||||| ||||| | |||| | ||||| ||||||||    
T  11210183 tcatcaacgttgcagatccggagacatgagtattccggagacataaatatggtcatatt 11210125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 23067561 - 23067527
Alignment:
Q  160 atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||||||||||||||||| ||||||||||||||||    
T  23067561 atcgatgtactctgtcaatttgaatgaatgaatat 23067527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 29266752 - 29266706
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatat 63  Q
    |||||||||||||||||||| ||||| ||||||| |||||| |||||    
T  29266752 tcaacgttgcagatccggagacatgagtattctggagacttgaatat 29266706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 29576987 - 29576933
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||||||||||||||| || ||||| ||||| | |||||| |||||||||||||    
T  29576987 tcaacgttgcagatccgaagacatgaatattccggagacttgaatatagtcatat 29576933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 45350848 - 45350806
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattca 139  Q
    |||||||||||||||||||| |||||||||||||  |||||||    
T  45350848 ttatgttattaacatggatgttgtgagtttgttcacagattca 45350806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 45360327 - 45360285
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattca 139  Q
    |||||||||||||||||||| |||||||||||||  |||||||    
T  45360327 ttatgttattaacatggatgttgtgagtttgttcacagattca 45360285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 2945469 - 2945510
Alignment:
Q  100 tgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||||| |||||||||||||| | |||||||    
T  2945469 tgttattaacatggatgctgtgagtttgttcgcatattcatc 2945510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 8712850 - 8712883
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  8712850 ttatgctattaacatggatgatgtgagtttgttc 8712883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 12519909 - 12519950
Alignment:
Q  22 gttgcagatccggaggcatgactattctgaagactttaatat 63  Q
    ||||||||||||||| ||||| |||||||||||||| |||||    
T  12519909 gttgcagatccggagacatgagtattctgaagacttgaatat 12519950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 34115525 - 34115468
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||||||||||||||||||||| ||||  ||||| | ||| || |||||||||||||    
T  34115525 tcatcaacgttgcagatccggagacatggttattccggagatttaaatatagtcatat 34115468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 47466208 - 47466289
Alignment:
Q  60 atatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||  |||  |||| ||||||| |   ||||| |||||||||||||| |||||||||||||  |||||||||    
T  47466208 atatagtcatatttgtaggtttatgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatc 47466289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 51646380 - 51646469
Alignment:
Q  52 agactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||| |||||||||||||   ||| |||  |||||||| |   ||||| |||||||||||||| |||||||||||||  |||||||||    
T  51646380 agacttaaatatagtcatatgtgtaggctttaatactttgccgttttatgctattaacatggatgctgtgagtttgttcacagattcatc 51646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 6789663 - 6789619
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| ||||||||| |||| |||||||||    
T  6789663 ttatgctattaacatggatgttgtgagtttattcgcagattcatc 6789619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 9549690 - 9549786
Alignment:
Q  20 acgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||||  ||| ||||| ||||||| ||| || |||||||||||||  |||||| | | ||||||| |   ||||| ||||||||||||||    
T  9549690 acgttgcagatcaagagacatgattattctggagatttaaatatagtcatatgtatagacatttgtactttgccgttttatgctattaacatggatg 9549786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 11299920 - 11299876
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||| ||| || |||||||||||||| |||||||||    
T  11299920 ttatgttattaacttgggtgttgtgagtttgttcgcagattcatc 11299876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 22049197 - 22049165
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgtt 129  Q
    |||||||||||||||||||| ||||||||||||    
T  22049197 ttatgttattaacatggatgttgtgagtttgtt 22049165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 26624035 - 26623947
Alignment:
Q  53 gactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||  ||||| ||| || | |||||   |||| |||||||||| ||||||||||||| || | |||||||||    
T  26624035 gacttgaatatagtcatatttgtagacatatgtattatgtcattgtatgctattaacatgaatgatgtgagtttatttgaagattcatc 26623947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 26674706 - 26674750
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  26674706 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 26674750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 40198330 - 40198286
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||| | ||| |||||||||||||||||| |||||    
T  40198330 ttatgttattaacaggaatgttgtgagtttgttcgtagactcatc 40198286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 43244253 - 43244193
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| |||||||||||||||||||| ||||| ||||  | |||| | ||||||||||||||    
T  43244253 catcgtcaacgttgcagatccggagacatgagtatttcggagacatgaatatagtcatatt 43244193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 46728706 - 46728662
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||||||||||| |||||||||||||  |||||||||    
T  46728706 ttatattattaacatggatgctgtgagtttgttcacagattcatc 46728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 34020850 - 34021036
Alignment:
Q  16 atcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggat 115  Q
    |||||||||||| ||||||||||| |||||||| || || |||||||||||||||||  ||| ||||| |||||||||   ||||| |||||||||| ||    
T  34020850 atcaacgttgcaaatccggaggcacgactattccgatgattttaatatagtcatatttgtaggcttatgtactttgtcgttttatgctattaacatgtat 34020949  T
Q  116 gatgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaat 192  Q
    |||||||||||||||  |||||||||         |||| ||||||| ||||| ||||||||||||| ||||  |||||||||||||    
T  34020950 gatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgtattgcatcgatgtactctatcaatatgaatgaatgaat 34021036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 12654179 - 12654052
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||| ||||| ||||| ||||| | |||||| ||||||||||||||  ||| | ||| || ||||||   ||||| |||||||||||    
T  12654179 tcatcaacgttgcagattcggagacatgagtattccggagacttgaatatagtcatatttgtaggcatatgtattttgtcgttttatgctattaacatgg 12654080  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||| |||||||||    
T  12654079 atgatgtgagtttgttcgcagattcatc 12654052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 144
Target Start/End: Complemental strand, 12481237 - 12481110
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| |||||  |||| | |||||| ||||||||||||||  ||| | ||  ||| ||| |   ||||| ||||||||||||||    
T  12481237 tcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgccgttttatgctattaacatggatg 12481138  T
Q  117 atgtgagtttgttcgtagattcatcttt 144  Q
    ||||||||||||||  ||||||||||||    
T  12481137 atgtgagtttgttcacagattcatcttt 12481110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 8644511 - 8644603
Alignment:
Q  52 agactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||||||||||||||||||   ||| ||| | |||||||||   ||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  8644511 agactttaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatggatgttgtgagtttgttcgcagattcatcttt 8644603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 15127992 - 15127876
Alignment:
Q  20 acgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatg 119  Q
    ||||||||||||||||||| | | |||||||||||||| || ||||||||||   ||| ||| | |||| |||    |||||||||||||||||||| ||    
T  15127992 acgttgcagatccggaggc-taaatattctgaagacttgaacatagtcatatgtgtaggcttctgtactctgttgttttatgttattaacatggatgttg 15127894  T
Q  120 tgagtttgttcgtagatt 137  Q
    ||| ||||||||||||||    
T  15127893 tgaatttgttcgtagatt 15127876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 4660771 - 4660815
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||    
T  4660771 ttatgctattaacatggatgatgtgagtttgttcatagattcatc 4660815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 5417010 - 5416966
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||    
T  5417010 ttatgctattaacatggatgttgtgagtttgttcgtagattcatc 5416966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 7049486 - 7049598
Alignment:
Q  10 gacatcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaac 109  Q
    ||||||||| |||||||||||||||||  |||| ||||| ||||| || |||||||||||||   ||| | | | |||||||||   ||||| |||||||    
T  7049486 gacatcatccacgttgcagatccggagatatgattattccgaagatttaaatatagtcatatgtgtaggcatttgtactttgtcgttttatgctattaac 7049585  T
Q  110 atggatgatgtga 122  Q
    ||||||| |||||    
T  7049586 atggatgttgtga 7049598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 30813320 - 30813444
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| |||||  |||    |||||| ||||||||||||||  ||| | ||  ||| ||| |   ||||| ||||||||||||||    
T  30813320 tcaacgttgcagatccggagacatgaggatttcagagacttgaatatagtcatatttgtaggcataggtaccttggcgttttatgctattaacatggatg 30813419  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  30813420 atgtgagtttgttcacagattcatc 30813444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 14783009 - 14782889
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||||    | ||||| | |||| | ||||||||||||||  ||| | ||  ||||||| ||  ||||| |||||||||||||     
T  14783009 tcaacgttgcagatccggagg----agtattccggagacatgaatatagtcatatttgtaggcataggtactttgccattttatgctattaacatggata 14782914  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  14782913 atgtgagtttgttcacagattcatc 14782889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 14730948 - 14730982
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcg 131  Q
    |||||||||||||||||||||||||||||||||||    
T  14730948 ttatgttattaacatggatgatgtgagtttgttcg 14730982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 29920708 - 29920651
Alignment:
Q  84 atactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||   ||||| |||||||||||||| ||||||||||||| ||||||||||    
T  29920708 atactttgtcgttttatgctattaacatggatgttgtgagtttgttcatagattcatc 29920651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 23654593 - 23654637
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  23654593 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 23654637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 2304705 - 2304650
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||||  | |||| ||||||||||||||    
T  2304705 tcaacgttgcagatccggagacatgagtattctagatacttgaatatagtcatatt 2304650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 4394024 - 4394079
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| |||||   |||||| ||||||||||||||    
T  4394024 tcaacgttgcagatccggagacatgagtattcatgagacttgaatatagtcatatt 4394079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 6295961 - 6295910
Alignment:
Q  148 gaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatattatt 198  Q
    |||||| ||||| ||||||||||||| |||| ||||||||||||||||||||    
T  6295961 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatattatt 6295910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 6302771 - 6302720
Alignment:
Q  148 gaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatattatt 198  Q
    |||||| ||||| ||||||||||||| |||| ||||||||||||||||||||    
T  6302771 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatattatt 6302720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 13871493 - 13871438
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||| | |||| | ||||||||||||||    
T  13871493 tcaacgttgcagatccggagacatgagtattccggagacatgaatatagtcatatt 13871438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 23101275 - 23101220
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||| | |||| | ||||||||||||||    
T  23101275 tcaacgttgcagatccggagacatgagtattccggagacgtgaatatagtcatatt 23101220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 23637987 - 23637932
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| ||||||||||||||| ||||| ||||| | |||||| ||||||||||||||    
T  23637987 tcaatgttgcagatccggagacatgagtattccggagacttgaatatagtcatatt 23637932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 23654504 - 23654559
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| |||||  |||| | |||||| ||||||||||||||    
T  23654504 tcaacgttgcagatccggagacatgaggattcaggagacttgaatatagtcatatt 23654559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 23947206 - 23947163
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||    
T  23947206 tatgctattaacttggatgttgtgagtttgttcgtagattcatc 23947163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 133
Target Start/End: Complemental strand, 30879627 - 30879592
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgta 133  Q
    |||||||||||| |||||||||||||||||||||||    
T  30879627 tatgttattaacttggatgatgtgagtttgttcgta 30879592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 1106734 - 1106612
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatata---------gtcatattcatagacttatatactttgtcagcttatgttatta 107  Q
    |||||||||||||||||||| ||||| ||||| | |||||| ||||||         ||||||||  ||| | ||| ||||||| |   ||||| |||||    
T  1106734 tcaacgttgcagatccggagacatgagtattccggagacttgaatataatcatgttagtcatatttgtaggcatatgtactttgccgttttatgctatta 1106635  T
Q  108 acatggatgatgtgagtttgttc 130  Q
    |||||||||||||||||||||||    
T  1106634 acatggatgatgtgagtttgttc 1106612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 3338089 - 3338178
Alignment:
Q  52 agactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||| |||||| |||||||  ||| ||||| |||| |||||  ||||| |||||||||||||||| | || ||||| | |||||||||    
T  3338089 agacttgaatatattcatatttgtaggcttatgtactatgtcattttatgatattaacatggatgatataagcttgtttggagattcatc 3338178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 6296027 - 6295994
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    |||||||||||||||||||| |||||||||||||    
T  6296027 ttatgttattaacatggatgttgtgagtttgttc 6295994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 6302837 - 6302804
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    |||||||||||||||||||| |||||||||||||    
T  6302837 ttatgttattaacatggatgttgtgagtttgttc 6302804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 8978572 - 8978487
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||||||||||||  ||| | ||| |||| ||||   ||||||||| |||||||||| |||||||||||||| |  |||||||||    
T  8978572 aatatagtcatatttgtaggcatatgtactatgtcgttttatgttatgaacatggatgttgtgagtttgttcgcaatttcatcttt 8978487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 15589835 - 15589790
Alignment:
Q  150 atttatattg-atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  15589835 atttatattgtatcgatgtactctatcaatttgaatgaatgaatat 15589790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 19760033 - 19760090
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| |||| |||||| | ||| || |||||||||||||    
T  19760033 tcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatat 19760090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 20496476 - 20496565
Alignment:
Q  52 agactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||| |||||||||||||   ||| ||| | ||||||| |   ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  20496476 agacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgctattaatatggatgttgtgagtttgttcgcagattcatc 20496565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 21507632 - 21507599
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  21507632 ttatgctattaacatggatgatgtgagtttgttc 21507599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 23843293 - 23843236
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| |||| |||||| | ||| || |||||||||||||    
T  23843293 tcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatat 23843236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 4663606 - 4663562
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  4663606 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 4663562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 7870482 - 7870526
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||| |||||||||||||||||||||| | ||||||    
T  7870482 ttatgctattaacctggatgatgtgagtttgttcgtgggttcatc 7870526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 8693449 - 8693405
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  8693449 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 8693405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 11426273 - 11426317
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||||||||||  ||||| ||||||||||    
T  11426273 ttatgctattaacatggatgatgtgagcctgttcatagattcatc 11426317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 13871403 - 13871359
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  13871403 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 13871359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 19402712 - 19402664
Alignment:
Q  24 tgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||| ||||| ||||| | |||||| ||||||||||||||    
T  19402712 tgcagatccggagacatgagtattccggagacttgaatatagtcatatt 19402664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 23101186 - 23101142
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  23101186 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 23101142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 33541400 - 33541284
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||| |||||  ||| |||||  | ||| ||||| |||||||||||||| ||  ||| ||||| |||||||||   | ||| |||||||||||    
T  33541400 tcatcaacgtttcagatttggatgcatggttgttccgaagattttaatatagtcatgtttgtaggcttatgtactttgtcgtttcatgctattaacatgg 33541301  T
Q  114 atgatgtgagtttgttc 130  Q
    |||   |||||||||||    
T  33541300 atgtcatgagtttgttc 33541284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 35039019 - 35039059
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagatt 137  Q
    ||||| |||||||||||||| |||||||||||||| |||||    
T  35039019 ttatgctattaacatggatgttgtgagtttgttcgcagatt 35039059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 4019846 - 4019970
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||||||||| ||||||| |||||| |||||||| || |  |||| ||||| |||||||||   ||||| ||||||||||||||    
T  4019846 tcaacgttgcagatccggaggcatgagtattctggagacttgaatatagtaatctgtataggcttatgtactttgtcgttttatgctattaacatggatg 4019945  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||| | |||||||||    
T  4019946 ttgtgagtttgtttgcagattcatc 4019970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 55446311 - 55446435
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||  | || ||||||||     ||||| ||||||||| ||||    
T  55446311 tcaacgttgcagatccggagtcatgagtattctgaagacttgaatatagtcatatttatatgcatagatactttgctgttttatgctattaacatagatg 55446410  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    |||||| |||||||  |||||||||    
T  55446411 atgtgactttgttcacagattcatc 55446435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 37051839 - 37052031
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatg----ttattaac 109  Q
    |||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||  ||| ||||| ||||||| |   |||||     |||||||    
T  37051839 tcatcaacgttgcagatccggaggcatagctattccgaagattttaatatagtcatatttgtaggcttatgtactttgccgttttatgctatatattaac 37051938  T
Q  110 atggatgatgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaat 192  Q
    ||||||| ||||||||| |||  | |||||||         ||||  |||||| ||||| |||||||||||||||||| ||||||||||||||    
T  37051939 atggatgttgtgagttttttcacaaattcatcctttttgtttttagtgaatttgtattgcatcgatgtactctgtcaatttgaatgaatgaat 37052031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 1806328 - 1806212
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||| ||||| |||||||  ||||| | ||| ||||||||||||||||| |||| ||||| || |||| |   ||||| |||||||| ||    
T  1806328 tcatcaacgttgcaaatccgaaggcatgggtattccggagattttaatatagtcatatttataggcttatgtattttgccgtattatgctattaacaagg 1806229  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| |||||||||||||    
T  1806228 atgttgtgagtttgttc 1806212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 33637657 - 33637781
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||||||||| || |||||  |||| | |||||| ||||||||||||||  ||| | ||  ||| ||| ||  ||||| ||||||||||||||    
T  33637657 tcaacgttgcagatccgtagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgccattttatgctattaacatggatg 33637756  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  33637757 atgtgagtttgttcacagattcatc 33637781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 55455127 - 55455249
Alignment:
Q  19 aacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgat 118  Q
    |||||||||||||||||| ||||| ||||| | |||| | ||||||||||||||  ||  | ||| ||||||| |   ||||| ||||||||||||||||    
T  55455127 aacgttgcagatccggagacatgagtattccggagacatgaatatagtcatatttgtaagcatatgtactttgccgttttatgctattaacatggatgat 55455226  T
Q  119 gtgagtttgttcgtagattcatc 141  Q
    |||||||| |||  |||||||||    
T  55455227 gtgagtttattcacagattcatc 55455249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 105916 - 105789
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactt---taatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||| ||||| ||||| ||||| | | ||||   | |||||||||||||  ||| | ||  |||||||||   ||||| |||||||||||    
T  105916 tcaacgttgcagattcggagacatgagtattccggaaacttcaattatatagtcatatttgtaggcataggtactttgtcgttttatgctattaacatgg 105817  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||| |||||||||    
T  105816 atgatgtgagtttgttcggagattcatc 105789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 32080632 - 32080516
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||| |||||  |||  | |||||| ||||||||||||||  ||| | ||  ||| |||||   ||||| |||||||||||    
T  32080632 tcatcaacgttgcagatccggagacatgaggatttcggagacttgaatatagtcatatttgtaggcgtaggtaccttgtctttttatgctattaacatgg 32080533  T
Q  114 atgatgtgagtttgttc 130  Q
    ||||| |||||||||||    
T  32080532 atgatatgagtttgttc 32080516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 50460438 - 50460562
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||| ||||| || ||||| |||||  ||||||| |||||||||||||   ||| ||| | ||||||||    ||||||| ||||||||||||    
T  50460438 tcaacgttgcaaatccgaagacatgagtattccaaagacttgaatatagtcatatgtgtaggcttttgtactttgttgttttatgttgttaacatggatg 50460537  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||| | |||||||    
T  50460538 ttgtgagtttgttcgcatattcatc 50460562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 20987664 - 20987617
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatcttta 145  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  20987664 tatgctattaacttggatgatgtgagtttgttcgtagattcatcttta 20987617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 48652315 - 48652192
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| |||||  |||| | |||||| ||||||||||||||  ||| | ||  ||| |||     ||||| ||||||||||||||    
T  48652315 tcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcataggtaccttgctgttttatgctattaacatggatg 48652216  T
Q  117 atgtgagtttgttcgtagattcat 140  Q
    ||||||||||||||  ||||||||    
T  48652215 atgtgagtttgttcacagattcat 48652192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 19861161 - 19861099
Alignment:
Q  10 gacatcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||| |||||||||||||||||||| ||||| ||||||  |||||| ||||||||||||||    
T  19861161 gacatcgtcaacgttgcagatccggagacatgagtattctagagacttgaatatagtcatatt 19861099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 30156156 - 30156043
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||| ||||||||||||| | ||||  ||||  | |||| | ||||||||||||||  ||| | |||||||||||||   ||||| ||||||||||||||    
T  30156156 tcaaggttgcagatccggggacatgggtatttcggagacatgaatatagtcatatttgtaggcatatatactttgtcgttttatgctattaacatggatg 30156057  T
Q  117 atgtgagtttgttc 130  Q
     |||||||||||||    
T  30156056 ttgtgagtttgttc 30156043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 36624575 - 36624515
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| |||||||||||||||||||| ||||| ||||||| |||| | ||||||||||||||    
T  36624575 catcgtcaacgttgcagatccggagacatgagtattctggagacatgaatatagtcatatt 36624515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 47587239 - 47587115
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||| ||||||||||| ||| ||  | |||| || | |||| || |||||||||||  ||| ||| |||||| ||||   ||||| |||||||||| |||    
T  47587239 tcaatgttgcagatccagagacaaaagtattatggatacttaaaaatagtcatatttgtaggcttttatactctgtcgttttatgctattaacatgaatg 47587140  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||| |||||||||    
T  47587139 atgtgagtttgttcgcagattcatc 47587115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 913185 - 913058
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||| ||    ||||  | |||||| |||||||||||||   ||| |||   ||||||| |   ||||| |||||||||||    
T  913185 tcatcaacgttgcagatccggagacaaaggtatttcggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatgg 913086  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||  |||||||||    
T  913085 atgatgtgagtttgttcacagattcatc 913058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 2148001 - 2148127
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||| ||| || |||  |||| ||||| |||||||| ||||||||||||||  ||||| | | ||||||| |   ||||| |||||| ||||    
T  2148001 tcatcaacgttgtaga-cctgagagatgagtattccgaagacttgaatatagtcatatttgtagacatttgtactttgccgttttatgctattaatatgg 2148099  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| |||||||||||||| | |||||||    
T  2148100 atgttgtgagtttgttcgcaaattcatc 2148127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 25631415 - 25631372
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  25631415 tatgttattaacttggatgatgtgagtttgttcgcagattcatc 25631372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 28995178 - 28995051
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||| ||||||||||||||||  ||||  ||||| | ||| || |||||||||||||   ||| | | | ||||||| |   ||||| |||||||||||    
T  28995178 tcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtaggcatttgtactttgccgttttatgctattaacatgg 28995079  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| ||||||||||||| ||||||||||    
T  28995078 atgttgtgagtttgttcatagattcatc 28995051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 40797278 - 40797405
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||| ||| |||||||||| || |  ||||| | |||||| |||||||||||||   ||| |||   |||||||||   ||||| ||||||||| |    
T  40797278 tcatcaacattgtagatccggagacaagggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgtcgttttatgctattaacatag 40797377  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||  |||||||||    
T  40797378 atgatgtgagtttgttcacagattcatc 40797405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 51990750 - 51990695
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||||| |||| | ||||||||||||||    
T  51990750 tcaacgttgcagatccggagacatgagtattctggagacataaatatagtcatatt 51990695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 1074769 - 1074647
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatata---------gtcatattcatagacttatatactttgtcagcttatgttatta 107  Q
    |||||||||||||||||||| ||||| ||||| | |||||| ||||||         ||||||||  ||||| ||| ||||||| |   ||||| |||||    
T  1074769 tcaacgttgcagatccggagacatgagtattccggagacttgaatataatcatgttagtcatatttgtagacatatttactttgccgttttatgctatta 1074670  T
Q  108 acatggatgatgtgagtttgttc 130  Q
    |||||||||||||||||||||||    
T  1074669 acatggatgatgtgagtttgttc 1074647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 22844300 - 22844413
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||| ||||||||||| || ||||  ||||| | |||| | ||||||||||||| | ||| |||   |||||||||   ||||| ||||||||||||||    
T  22844300 tcaacattgcagatccgaagacatgggtattccggagacctaaatatagtcatatgcgtaggctttagtactttgtcgttttatgctattaacatggatg 22844399  T
Q  117 atgtgagtttgttc 130  Q
     |||||||||||||    
T  22844400 ttgtgagtttgttc 22844413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 27856349 - 27856390
Alignment:
Q  103 tattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  27856349 tattaacttggatgatgtgagtttgttcgcagattcatcttt 27856390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 40883738 - 40883617
Alignment:
Q  20 acgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatg 119  Q
    |||||||||||||| || ||||| ||||  | | || | ||||||||||||||  ||| |||   |||||||||   ||||| |||||||| ||||||||    
T  40883738 acgttgcagatccgaagacatgagtatttcggatacatgaatatagtcatatttgtaggcttgggtactttgtcgttttatgctattaacacggatgatg 40883639  T
Q  120 tgagtttgttcgtagattcatc 141  Q
    |||||||||||  |||||||||    
T  40883638 tgagtttgttcacagattcatc 40883617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 40702751 - 40702807
Alignment:
Q  85 tactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||  ||||| | |||||||||||||||| |||||||||| |||||||||    
T  40702751 tactttgtcattttatgctcttaacatggatgatgtaagtttgttcgcagattcatc 40702807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 42106466 - 42106510
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  42106466 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 42106510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 48855220 - 48855264
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||    
T  48855220 ttatgttattaacatggatgttgtgagtttattcatagattcatc 48855264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 25939325 - 25939238
Alignment:
Q  54 actttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| |||||||||||||   ||| ||| | ||||||  || |||||| ||| |||||||||| ||||| ||||||||||||||||||    
T  25939325 acttgaatatagtcatatgtgtaggcttttgtactttaccatcttatgctatcaacatggatgttgtgaatttgttcgtagattcatc 25939238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 36691674 - 36691619
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||| |||| ||||| ||||| | |||||| ||||||||||||||    
T  36691674 tcaacgttgcagatctggagacatgagtattccggagacttgaatatagtcatatt 36691619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 36906307 - 36906350
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||    
T  36906307 tatgctattaacttggatgatgtgagtttgttcgcagattcatc 36906350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 41868203 - 41868086
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgacta-ttctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaaca 110  Q
    |||| ||||||||||||| |||||| ||||| || ||||| |||||| ||||||||||||||  ||||| ||  ||||||| |   ||||| ||||||||    
T  41868203 catcgtcaacgttgcagaaccggagacatgagtatttctg-agacttgaatatagtcatatttgtagacataggtactttgccgttttatgctattaaca 41868105  T
Q  111 tggatgatgtgagtttgttc 130  Q
    | |||| |||||||||||||    
T  41868104 t-gatggtgtgagtttgttc 41868086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 46934824 - 46934867
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||    
T  46934824 tatgctattaacttggatgttgtgagtttgttcgtagattcatc 46934867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 48401180 - 48401223
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||||||||||||||||||||||||  |||||||||    
T  48401180 tatgctattaacatggatgatgtgagtttgttcacagattcatc 48401223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 48401436 - 48401479
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||||||||||||||||||||||||  |||||||||    
T  48401436 tatgctattaacatggatgatgtgagtttgttcacagattcatc 48401479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 194
Target Start/End: Original strand, 48401501 - 48401548
Alignment:
Q  148 gaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  48401501 gaatttatattgtatcgatgtactctatcaatttgaatgaatgaatat 48401548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 53155305 - 53155250
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||| |||||||||||||| ||||| ||||| |||||| | ||||||||||||||    
T  53155305 tcaactttgcagatccggagacatgagtattccgaagacatgaatatagtcatatt 53155250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 53427046 - 53427137
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaa 108  Q
    ||||||||||||||||| || | ||| ||||| |||||||| |||||||||||||   ||| ||| | |||||||| |  ||||||||||||    
T  53427046 tcaacgttgcagatccgaagacttgagtattccgaagacttgaatatagtcatatgtgtaggcttttgtactttgtgattttatgttattaa 53427137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 25135199 - 25135137
Alignment:
Q  10 gacatcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||| ||||||||||||||  | || ||||| |||||||||||||| |||||| |||||||    
T  25135199 gacatcgtcaacgttgcagatatgaagacatgaatattctgaagacttgaatataatcatatt 25135137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 39340447 - 39340501
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    |||||||||||||||||||| ||||  ||||| | |||||| |||||||||||||    
T  39340447 tcaacgttgcagatccggagacatgtgtattccggagacttgaatatagtcatat 39340501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 48212656 - 48212690
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcg 131  Q
    |||||||||||||||||||| ||||||||||||||    
T  48212656 ttatgttattaacatggatgttgtgagtttgttcg 48212690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 11819425 - 11819458
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  11819425 ttatgctattaacatggatgatgtgagtttgttc 11819458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 33076530 - 33076587
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||||||||  ||||| | ||| || |||||||||||||    
T  33076530 tcatccacgttgcagatccggaggcatggttattccggagatttgaatatagtcatat 33076587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 34103623 - 34103510
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||| |||||  |||| ||||| | ||||||  |||||||||||||  ||| | || |||||||| |   || || ||||||||||||||    
T  34103623 tcaacgttgcagatacggagaaatgagtattccggagacttggatatagtcatatttgtagtcataaatactttgccgttttgtgctattaacatggatg 34103524  T
Q  117 atgtgagtttgttc 130  Q
     ||||| |||||||    
T  34103523 ttgtgaatttgttc 34103510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 35175051 - 35175084
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  35175051 ttatgctattaacatggatgatgtgagtttgttc 35175084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 49627822 - 49627777
Alignment:
Q  150 atttatattg-atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  49627822 atttatattgtatcgatgtactctatcaatttgaatgaatgaatat 49627777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 3457265 - 3457309
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||| | |||||||    
T  3457265 ttatgctattaacatggatgttgtgagtttgttcgcaaattcatc 3457309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 13701788 - 13701744
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  13701788 ttatgctattaacatggatgttgtgagtttgttcaaagattcatc 13701744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 22485308 - 22485352
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||| |||||||||| ||||||||||||| ||||||||||    
T  22485308 ttatgctatgaacatggatgttgtgagtttgttcatagattcatc 22485352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 32237782 - 32237738
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||| ||||||||| |||||||||    
T  32237782 ttatgctattaacatggatgttgtgtgtttgttcgcagattcatc 32237738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 35174959 - 35175015
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcata 70  Q
    |||||||||||||||||  |||| ||||| ||||||| |||| | ||||||||||||    
T  35174959 tcatcaacgttgcagatatggagacatgagtattctggagacatgaatatagtcata 35175015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 194
Target Start/End: Complemental strand, 35501559 - 35501448
Alignment:
Q  83 tatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattca-tctttaacgaatttatattgatcgatgtactctgtcaacttg 181  Q
    ||||||||||||  ||||| |||||||||||||| ||||||  |||||  ||||||| | |||| | |||||  ||| ||||||||| | | |||| |||    
T  35501559 tatactttgtcattttatgatattaacatggatgttgtgagcctgttcacagattcagtttttagcaaatttgcatt-atcgatgtattttatcaatttg 35501461  T
Q  182 aatgaatgaatat 194  Q
    |||||||||||||    
T  35501460 aatgaatgaatat 35501448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 40365552 - 40365596
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||| |||| ||||    
T  40365552 ttatgctattaacatggatgttgtgagtttgttcgcagatgcatc 40365596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 48855126 - 48855186
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| ||| |||||||||||||||| |||||  |||| | |||||| ||||||||||||||    
T  48855126 catcgtcaccgttgcagatccggagacatgaggattccggagacttgaatatagtcatatt 48855186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 13691632 - 13691505
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||| ||||||||||||||||   ||| |||||||||||||||||  ||| ||||| || |||| |   ||||| |||||||||||    
T  13691632 tcatcaacgttgcagatctggaggcatgactattccagagattttaatatagtcatatttgtaggcttatgtattttgccgttttatgctattaacatgg 13691533  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| ||||||||||||| ||||||||||    
T  13691532 atgttgtgagtttgttcatagattcatc 13691505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 13969506 - 13969382
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||| ||||||| | |||| |||||||| ||||  |||| ||| | ||||||| |   ||||||||||||||||||||    
T  13969506 tcaacgttgcagatccggagacatgagtattctggaaacttgaatatagtaatatgtataggcttttgtactttgccgttttatgttattaacatggatg 13969407  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||| |||||||||    
T  13969406 ttgtgagtttgttcgcagattcatc 13969382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 14 - 195
Target Start/End: Original strand, 2350867 - 2351057
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||||| ||||||  |||||| | ||| |||||||||||||||||  ||| ||| | ||||||| |   ||||| |||||||||||    
T  2350867 tcatcaacgttgcagatccgaaggcatagctattccggagattttaatatagtcatatttgtaggcttttgtactttgccgttttatgctattaacatgg 2350966  T
Q  114 atgatgtgagtttgttcgtagattcatc--------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatatt 195  Q
    ||| |||||||||||||  | |||||||        |||| ||||||| ||||| ||||||||||||| |||| ||||||||| |||||||    
T  2350967 atgttgtgagtttgttcacatattcatcattttgtttttagcgaatttgtattgcatcgatgtactctatcaatttgaatgaacgaatatt 2351057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 47551343 - 47551456
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||  ||||| ||||||| |||||| ||||||||||||||  ||| | || |||||||| ||  ||||| ||||||||| ||||    
T  47551343 tcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggcatagatactttgccattttatgctattaacatagatg 47551442  T
Q  117 atgtgagtttgttc 130  Q
     |||||||||||||    
T  47551443 ttgtgagtttgttc 47551456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 40862692 - 40862568
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||| ||| ||||| |||||||||||||  ||||||||||||||  ||| | ||  |||| ||||   ||||| ||||||||||||||    
T  40862692 tcaacgttgcagatccagagacatgagtattctgaagactaaaatatagtcatatttgtaggcataagtactctgtcgttttatgctattaacatggatg 40862593  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     | |||||||||||| |||||||||    
T  40862592 ttttgagtttgttcgcagattcatc 40862568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 34566944 - 34567114
Alignment:
Q  32 cggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcg 131  Q
    |||||||||| |||||  | ||| |||||||||||||||||  ||| ||||| ||||||| |   ||||| |||||||||||||| |||||||||||||     
T  34566944 cggaggcatggctatttcggagattttaatatagtcatatttgtaggcttatgtactttgccgttttatgctattaacatggatgttgtgagtttgttca 34567043  T
Q  132 tagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaat 192  Q
     |||||||||         |||| ||||||| ||||| ||||||||||||| |||| ||||||||||||||    
T  34567044 cagattcatcctttttatttttagcgaatttgtattgcatcgatgtactctatcaatttgaatgaatgaat 34567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 4870900 - 4870780
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||| |||||||||| ||||| ||||||| |||| | |||||||||||||| | || | || ||||||||||   ||||| |||||||||||||     
T  4870900 tcaacgttgtagatccggagacatgagtattctggagacatgaatatagtcatatttacaggcatagatactttgtcgttttatgctattaacatggatt 4870801  T
Q  117 atgtgagtttgttcgtagatt 137  Q
      |||||||||||| ||||||    
T  4870800 cagtgagtttgttcatagatt 4870780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 129
Target Start/End: Complemental strand, 27469574 - 27469462
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||  ||||||  ||| || ||||||||||||    ||| |||  |||||||||||  ||||| ||||||||||||||    
T  27469574 tcaacgttgcagatccggagacatggatattctagagagttaaatatagtcataagtgtaggctttaatactttgtcattttatgctattaacatggatg 27469475  T
Q  117 atgtgagtttgtt 129  Q
    |||||||||||||    
T  27469474 atgtgagtttgtt 27469462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 32878956 - 32879076
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||| |||||||||| ||||| ||||| ||| |||| ||||||||||||||  ||| | ||  |||||||||   ||||| ||||||||||| ||    
T  32878956 tcaacgttgtagatccggagacatgagtattccgaaaacttgaatatagtcatatttgtaggcataagtactttgtcgttttatgctattaacatgggtg 32879055  T
Q  117 atgtgagtttgttcgtagatt 137  Q
    |||||||| |||||| |||||    
T  32879056 atgtgagtatgttcgcagatt 32879076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 26771354 - 26771481
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||||||||| || ||||| ||||  | |||||| |||||||||||||   ||| ||| | |||||||||   ||||| ||||||||||| ||    
T  26771354 tcaacgttgcagatccgaagacatgaatatttcggagacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatggttg 26771453  T
Q  117 atgtgagtttgttcgtagattcatcttt 144  Q
     |||||||||||||||  ||||||||||    
T  26771454 ttgtgagtttgttcgttaattcatcttt 26771481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 194
Target Start/End: Original strand, 46589396 - 46589583
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||  ||||| ||||    |||||| |||||| ||||||   |||||||   |||||||||   ||||||||||||||||||||    
T  46589396 tcaacgttgcagatccggacacatgagtatttcagagacttaaatatactcatatgtgtagactttagtactttgtcgttttatgttattaacatggatg 46589495  T
Q  117 atgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    ||||||||||||||  | |||||||         |||| |||||||  |||| ||||||||||||| |||| ||||||||||||||||    
T  46589496 atgtgagtttgttcacatattcatcccttttgtttttagcgaattttcattgtatcgatgtactctatcaatttgaatgaatgaatat 46589583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 12871864 - 12871982
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    |||| |||||||||||||||| ||| ||||| ||||| | |||||| |||||||||||| |  ||| | ||| |||||||||   ||||| || ||||||    
T  12871864 catcgtcaacgttgcagatccagagacatgagtattccggagacttgaatatagtcatacttgtaggcatatgtactttgtcgttttatgctaataacat 12871963  T
Q  112 ggatgatgtgagtttgttc 130  Q
    ||||| |||||||||||||    
T  12871964 ggatgctgtgagtttgttc 12871982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 141
Target Start/End: Complemental strand, 9298294 - 9298165
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    |||| |||||| |||||||||||||  |||| ||||  | |||||| |||||| ||||||| |||| | ||  ||||||||||  ||||  |||||||||    
T  9298294 catcgtcaacgatgcagatccggagatatgagtatttcggagacttgaatataatcatatttataggcataggtactttgtcattttatactattaacat 9298195  T
Q  112 ggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||| |||| |||||||||    
T  9298194 ggatgttgtgagtttattcgcagattcatc 9298165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 33177464 - 33177340
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||| ||||| |||||||| ||||| |||| || |||||| |||||||||||||   ||| ||| | ||||||| |   |||||  |||||||||||||    
T  33177464 tcaacattgcaaatccggagacatgagtattatggagacttgaatatagtcatatgtgtaggcttttgtactttgccgttttatgcaattaacatggatg 33177365  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||| |||||||||    
T  33177364 ttgtgagtttgttcgcagattcatc 33177340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 44513868 - 44513744
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||  ||||| | |||||| |||||||||||||   ||| |||   |||||||     ||||||||||||||||||||    
T  44513868 tcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgctgttttatgttattaacatggatg 44513769  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  44513768 ttgtgagtttgttcaaagattcatc 44513744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 192
Target Start/End: Original strand, 37662643 - 37662785
Alignment:
Q  56 tttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattca-----tctttaacgaa 150  Q
    |||| ||||||||||||  ||| ||||  ||||||||||  ||||| |||||||||| ||| |||||||||||||  |||||||     | |||| ||||    
T  37662643 tttattatagtcatatttgtaggcttacgtactttgtcattttatgctattaacatgaatgttgtgagtttgttcacagattcagtttttttttagcgaa 37662742  T
Q  151 tttatattg-atcgatgtactctgtcaacttgaatgaatgaat 192  Q
    ||| ||||| ||||||||||||| |||| ||||||| ||||||    
T  37662743 tttgtattgcatcgatgtactctatcaatttgaatggatgaat 37662785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 10304821 - 10304950
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    |||| |||||||||||||| ||||| ||||  ||||| |||||||| ||||||||||||||  ||  | || ||||| ||  |  ||||| |||||| ||    
T  10304821 catcgtcaacgttgcagattcggagacatggatattccgaagacttgaatatagtcatatttgtatgcatagatactctgcaattttatgctattaaaat 10304920  T
Q  112 ggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||| | |||||||||    
T  10304921 ggatgttgtgagtttgtttgcagattcatc 10304950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 12147914 - 12147790
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||||| |||||||| ||||  ||||| | |||||| | |||||||||||   ||| |||   |||||||||   ||||| || |||||||||||    
T  12147914 tcaacgttgcaaatccggagacatgggtattccggagacttaagtatagtcatatgtgtaggctttagtactttgtcgttttatgctactaacatggatg 12147815  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  12147814 atgtgagtttgttcacagattcatc 12147790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 15312405 - 15312361
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  15312405 ttatgttattaacatggatgttgtgagtttgttcgcagattcatc 15312361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 18343866 - 18343990
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| |||||  |||| | |||||| ||||||||||||||  ||| | |   ||| ||| |   ||||| |||||||| |||||    
T  18343866 tcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatttgtaggcatgggtaccttgccgttttatgctattaacagggatg 18343965  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  18343966 atgtgagtttgttcacagattcatc 18343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 20413126 - 20413170
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||    
T  20413126 ttatgctattaacatggatgatgtgagtttgttcatagattcatc 20413170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 14265538 - 14265593
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||| | |||||| ||||||||||||||    
T  14265538 tcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcatatt 14265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 32301666 - 32301713
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  32301666 ttatgctattaacatggatgatgtgagtttgttcgcaaattcatcttt 32301713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 45193495 - 45193440
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| |||| || |||||| ||||||||||||||    
T  45193495 tcaacgttgcagatccggagacatgagtattttggagacttaaatatagtcatatt 45193440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 6158902 - 6158848
Alignment:
Q  18 caacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| ||||||||||| || ||||| |||||||||||||| ||||||||||||||    
T  6158902 caacattgcagatccgaagacatgagtattctgaagacttgaatatagtcatatt 6158848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 38783311 - 38783425
Alignment:
Q  13 atcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatg 112  Q
    ||||| || ||||||||||||||  ||||| ||||  || | ||| |||||||||||||| |||| | ||| |||| |||||  |||| |||||||||||    
T  38783311 atcataaaagttgcagatccggaaacatgagtatttcgatggcttgaatatagtcatatttataggcatatgtactatgtcattttatattattaacatg 38783410  T
Q  113 gatgatgtgagtttg 127  Q
    |||| | ||||||||    
T  38783411 gatgttttgagtttg 38783425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 21326718 - 21326775
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  21326718 tcatccacgttgcagatccggagacatggctattccgaagatttaaatatagtcatat 21326775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 32677019 - 32676978
Alignment:
Q  103 tattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  32677019 tattaacttggatgatgtgagtttgttcgcagattcatcttt 32676978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 38646829 - 38646938
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||| ||||||||||||||||| ||||  ||||||| ||| || |||||||||||||   ||||| | | ||||||| |   ||||| |||||||||||    
T  38646829 tcatccacgttgcagatccggagacatggttattctggagatttaaatatagtcatatgtgtagacatttgtactttgcctttttatgctattaacatgg 38646928  T
Q  114 atgatgtgag 123  Q
    ||| ||||||    
T  38646929 atgttgtgag 38646938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 42491215 - 42491326
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc------tttaac------gaatttatattg-atcgatgtactctgtcaacttgaa 183  Q
    |||||||||||||||||||| |||||||||||||  |||||||||      |||| |      |||||||||||| ||||||||||||| |||| |||||    
T  42491215 ttatgttattaacatggatgttgtgagtttgttcacagattcatcattttttttatcgaatttgaatttatattgtatcgatgtactctatcaatttgaa 42491314  T
Q  184 tgaatgaatatt 195  Q
    ||||||||||||    
T  42491315 tgaatgaatatt 42491326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 44562618 - 44562561
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| ||||||||||| | ||| || |||||||||||||    
T  44562618 tcatctacgttgcagatccggagacatgactattccggagatttaaatatagtcatat 44562561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 13999285 - 13999329
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||||||||| | |||||||||||||| |||||||||    
T  13999285 ttatgttattaacatggacgttgtgagtttgttcgcagattcatc 13999329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 28677917 - 28677873
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||    
T  28677917 ttatgctattaacatggatgttgtgagtttgttcgcagattcatc 28677873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 34039361 - 34039317
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||| |||||||||||||||||||| |||||||||||    
T  34039361 ttatgatattaatatggatgatgtgagtttgtttgtagattcatc 34039317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 34659507 - 34659383
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||| ||||||||||||||  |||  |||||  ||||||| ||||||||||||    ||| ||| | ||||||| ||  ||||| ||||||||||||||    
T  34659507 tcaacattgcagatccggagatatgggtattccaaagacttgaatatagtcataagtgtaggcttttttactttgccattttatgctattaacatggatg 34659408  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||| ||| | |||||||    
T  34659407 ttgtgagtttgctcgcaaattcatc 34659383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 7997981 - 7998024
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| ||||||||||||||||||| | |||||||||    
T  7997981 tatgttattaacttggatgatgtgagtttgtttgcagattcatc 7998024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 8893620 - 8893727
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatga 186  Q
    ||||| |||||||||||||| | ||||||||||| ||||||||||         |||| |||||||  |||| ||||||||||||| |||| ||||||||    
T  8893620 ttatgctattaacatggatgttatgagtttgttcctagattcatcctttttgtttttagcgaatttgcattgtatcgatgtactctatcaatttgaatga 8893719  T
Q  187 atgaatat 194  Q
    ||||||||    
T  8893720 atgaatat 8893727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 9687094 - 9687051
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||    
T  9687094 tatgctattaacttggatgatgtgagtttgttcgcagattcatc 9687051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 10627253 - 10627308
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||| ||||| ||||| | || || |||||||||||||||||||||    
T  10627253 tcaacgttgcagattcggagacatgagttttttggagactttaatatagtcatatt 10627308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 26097810 - 26097771
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagat 136  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  26097810 ttatgctattaacatggatgatgtgagtttgttcgcagat 26097771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 27534951 - 27535006
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| |||||  |||| | |||||| ||||||||||||||    
T  27534951 tcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatt 27535006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 27535040 - 27535083
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||    
T  27535040 ttatgctattaacatggatgatgtgagtttgttcacagattcat 27535083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 32784333 - 32784388
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||| | |||| | ||||||||||||||    
T  32784333 tcaacgttgcagatccggagacatgagtattccggagacataaatatagtcatatt 32784388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 33817057 - 33817014
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| |||||||||||||||||||||  ||||||||    
T  33817057 tatgttattaacttggatgatgtgagtttgttcgcggattcatc 33817014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 33876527 - 33876484
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| |||||||||||||||||||||  ||||||||    
T  33876527 tatgttattaacttggatgatgtgagtttgttcgcggattcatc 33876484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 44517402 - 44517457
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||| | |||| | ||||||||||||||    
T  44517402 tcaacgttgcagatccggagacatgagtattccggagacatgaatatagtcatatt 44517457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 51418327 - 51418374
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||||| |||||||||||| |||||||||||||  ||||||||||||    
T  51418327 ttatgttgttaacatggatgctgtgagtttgttcacagattcatcttt 51418374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 9172687 - 9172725
Alignment:
Q  103 tattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  9172687 tattaacttggatgatgtgagtttgttcgcagattcatc 9172725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 141
Target Start/End: Original strand, 9180669 - 9180707
Alignment:
Q  103 tattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  9180669 tattaacttggatgatgtgagtttgttcgcagattcatc 9180707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 11877240 - 11877206
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcg 131  Q
    |||||||||||||||||||| ||||||||||||||    
T  11877240 ttatgttattaacatggatgctgtgagtttgttcg 11877206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 25406173 - 25406127
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||| ||||||| |||||| |||||||||||||| ||||||||||||    
T  25406173 tatgctattaacttggatgctgtgagtttgttcgcagattcatcttt 25406127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 28399167 - 28399089
Alignment:
Q  52 agactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttc 130  Q
    |||||| ||||||||||||||  ||  | ||| ||||||| |   ||||| ||||||||||||||||||||||||||||    
T  28399167 agacttgaatatagtcatatttgtaagcatatgtactttgccgttttatgctattaacatggatgatgtgagtttgttc 28399089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 194
Target Start/End: Original strand, 36621752 - 36621786
Alignment:
Q  160 atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||||||||||||||||| ||||||||||||||||    
T  36621752 atcgatgtactctgtcaatttgaatgaatgaatat 36621786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 45750729 - 45750787
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||   |||||||| |||||    
T  45750729 tcatcaacgttgcagatccggagacatgagtattccgaagacaaaaatatagttatatt 45750787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 45805713 - 45805675
Alignment:
Q  103 tattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  45805713 tattaacttggatgatgtgagtttgttcgcagattcatc 45805675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 900433 - 900486
Alignment:
Q  142 tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||| |||||||| |||| ||||||||||||| |||| ||||||||||||||||    
T  900433 tttagcgaatttacattgtatcgatgtactctatcaatttgaatgaatgaatat 900486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 10599169 - 10599250
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    ||||||||||||||  ||||  ||| |||||||||    |||| |||||| ||||||| |||||||||||||| ||||||||    
T  10599169 aatatagtcatatttgtagatatatgtactttgtcgttctatgctattaatatggatgctgtgagtttgttcggagattcat 10599250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 33001800 - 33001889
Alignment:
Q  52 agactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||| ||||||||||||||  ||  |||||| |||||||||  ||||| ||||||||| | |||||| || ||||| | |||||||||    
T  33001800 agacttgaatatagtcatatttgtattcttataaactttgtcattttatgctattaacattgttgatgtaagcttgtttggagattcatc 33001889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 5856152 - 5856192
Alignment:
Q  154 atattgatcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  5856152 atattgaacgatgtactctatcaatttgaatgaatgaatat 5856192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 7995355 - 7995311
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  7995355 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 7995311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 16262964 - 16263000
Alignment:
Q  15 catcaacgttgcagatccggaggcatgactattctga 51  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  16262964 catcaacgttgcagatccggaagcatgagtattctga 16263000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 33125636 - 33125564
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcg 131  Q
    |||||||||||||| |||||| ||  || ||||||   ||||| |||||||||||| | ||||||||||||||    
T  33125636 aatatagtcatatttatagacataattattttgtcgttttatgctattaacatggacgttgtgagtttgttcg 33125564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 144
Target Start/End: Complemental strand, 33486807 - 33486767
Alignment:
Q  104 attaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    ||||||||||||| |||||||||||||  ||||||||||||    
T  33486807 attaacatggatgctgtgagtttgttcacagattcatcttt 33486767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 42276698 - 42276742
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  42276698 ttatgctattaacatggatgctgtgagtttgttcacagattcatc 42276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 45193406 - 45193374
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgtt 129  Q
    ||||| |||||||||||||||||||||||||||    
T  45193406 ttatgctattaacatggatgatgtgagtttgtt 45193374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 45750821 - 45750865
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| ||||||||||||| || |||||||    
T  45750821 ttatgctattaacatggatgctgtgagtttgttcataaattcatc 45750865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 47392419 - 47392511
Alignment:
Q  52 agactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||||| |||||||||||||   ||  ||| | |||||||||   ||| |||||||||||||||| ||||||||||||||  |||| ||||||    
T  47392419 agacttgaatatagtcatatgtgtatgcttttgtactttgtcgttttacgttattaacatggatgttgtgagtttgttcgctgatttatcttt 47392511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 50107698 - 50107662
Alignment:
Q  105 ttaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| || |||||||||||||||||||||    
T  50107698 ttaacatggatgttgagagtttgttcgtagattcatc 50107662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 8e-25; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 40565026 - 40564896
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||| |||| |||||| | ||| |||||||||||||||||  ||| ||||| |||||||||   ||||| ||||||||| |    
T  40565026 tcatcaacgttgcagatccggagacatggctattccggagattttaatatagtcatatttgtaggcttatgtactttgtcgttttatgctattaacatag 40564927  T
Q  114 atgatgtgagtttgttcgtagattcatcttt 144  Q
    ||| |||||||||||||  | ||||||||||    
T  40564926 atgttgtgagtttgttcacaaattcatcttt 40564896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 20146088 - 20145972
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||| |||||||||||||| || ||||| |||||| ||||| |||||||||||||||||  ||| ||||| ||||||||||  ||||| ||||||||| |    
T  20146088 tcatgaacgttgcagatccagatgcatgtctattccgaagattttaatatagtcatatttgtaggcttatgtactttgtcattttatgctattaacattg 20145989  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| |||||||||||||    
T  20145988 atgttgtgagtttgttc 20145972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 7151056 - 7151186
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||| ||| ||| | ||||| |||||||| ||||||||||| ||  |||  |||| |||||||||   |||||||||||||||||    
T  7151056 tcatcaacgttgcagatccagagacattagtattccgaagacttgaatatagtcatgtttgtaggtttatgtactttgtcgttttatgttattaacatgg 7151155  T
Q  114 atgatgtgagtttgttcgtagattcatcttt 144  Q
     ||   ||||||||||||| |||||||||||    
T  7151156 ttgcactgagtttgttcgtggattcatcttt 7151186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 141
Target Start/End: Original strand, 35455337 - 35455463
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||| || | |||  | ||||| |||||| ||||||| ||||||  ||| ||||||||||||||||  ||||||||| |||||||    
T  35455337 tcatcaacgttgcagatccagatgtatggtttttctgtagactt-aatatagacatatttgtaggcttatatactttgtcattttatgttatcaacatgg 35455435  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||||||   |||| ||||||||||||||    
T  35455436 atgatggatgtttattcgtagattcatc 35455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 6074605 - 6074417
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||||||||  |||||   | | |||||||||||||| ||  ||||||||| | || || |   || || |||||||||||    
T  6074605 tcatcaacgttgcagatccggaggcatggttattccagatattttaatatagtcatgtttgtagacttatgttctatgccgttttgtgctattaacatgg 6074506  T
Q  114 atgatgtgagtttgttcgtagattcatc---------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaat 192  Q
    ||| ||||||||||||| ||||||||||         |||| ||||||| ||||| ||||||||||||| ||||  |||||||||||||    
T  6074505 atgttgtgagtttgttcatagattcatcctttttgtttttagcgaatttgtattgcatcgatgtactctatcaatgtgaatgaatgaat 6074417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 6647782 - 6647655
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||||||||||||||||   ||| ||| | ||||||  |   ||| | |||||||||||    
T  6647782 tcatcaacgttgcagatccggagacatggatattccggagactttaatatagtcatatgtgtaggcttttgtacttttccgttttaagctattaacatgg 6647683  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||| ||||||||| |||| |||||||||    
T  6647682 atgttgtgagtttattcgcagattcatc 6647655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 17325519 - 17325403
Alignment:
Q  26 cagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtt 125  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||   ||| ||||| ||||||||||  ||||| ||||||||||||||   ||||||    
T  17325519 cagatccggaggcatgactattccagagattttaatatagtcatatatgtaggcttatgtactttgtcattttatgctattaacatggatg--ttgagtt 17325422  T
Q  126 tgttcgtagattcatcttt 144  Q
    ||||   ||||||||||||    
T  17325421 tgtttacagattcatcttt 17325403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 20270962 - 20271085
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||  ||||  | |||||| |||||||||||||   |||||||   |||||||||   ||||| ||||||||||||||    
T  20270962 tcaacgttgcagatccggagacatggatatttcggagacttaaatatagtcatatgtgtagactttagtactttgtcgttttatgctattaacatggatg 20271061  T
Q  117 atgtgagtttgttcgtagattcat 140  Q
     |||||||||||||  ||||||||    
T  20271062 ttgtgagtttgttcacagattcat 20271085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 33486435 - 33486311
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||||||||  ||||||| |||||| ||||| |||||||   ||| |||   ||||||| |   ||||| ||||||| ||||||    
T  33486435 tcaacgttgcagatccggaggcatgggtattctggagacttaaatatggtcatatgtgtaggctttagtactttgccgttttatgctattaacgtggatg 33486336  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
     |||||||||||||  |||||||||    
T  33486335 ttgtgagtttgttcacagattcatc 33486311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 2555220 - 2555162
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||||||||||||||||||| ||||| ||||| | |||||| ||||||||||||||    
T  2555220 tcatcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcatatt 2555162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 8957451 - 8957565
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||||||||  ||| |||||  | ||| |||||||||||||||||  | | ||| | |||||||||   ||||||||||||||||     
T  8957451 tcatcaacgttgcagatccggagatatggctatttcggagattttaatatagtcatatttgttggcttgtgtactttgtcgttttatgttattaacatga 8957550  T
Q  114 atgatgtgagtttgt 128  Q
    ||| ||||| |||||    
T  8957551 atgttgtgaatttgt 8957565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 39591296 - 39591418
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||| |||| | | |||||| |||||   ||||||||||||| ||||||   ||| ||||| || ||||||   ||||||||||||||||||||    
T  39591296 tcaacgttgcggatctgaatgcatgagtattccagagactttaatatattcatatatgtaggcttatgtattttgtcgttttatgttattaacatggatg 39591395  T
Q  117 atgtgagtttgttcgtagattca 139  Q
     | |||||||||||| |||||||    
T  39591396 ttatgagtttgttcgcagattca 39591418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 42505235 - 42505145
Alignment:
Q  51 aagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||||||||||  ||| | || ||||| ||||   | ||| |||||||||||||| |||||||||||||| |||||||||    
T  42505235 aagactttaatatagtcatatttgtaggcatagatactctgtcgtttcatgctattaacatggatgttgtgagtttgttcgcagattcatc 42505145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 17218052 - 17218158
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc--------tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaa 187  Q
    |||| ||||||||||||||| |||||| |||||| ||||||||||        |||| ||||||| ||||| ||||||||||||| |||| |||||||||    
T  17218052 ttatattattaacatggatgttgtgagattgttcatagattcatcctttcgtttttagcgaatttttattgtatcgatgtactctatcaatttgaatgaa 17218151  T
Q  188 tgaatat 194  Q
    |||||||    
T  17218152 tgaatat 17218158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 41554735 - 41554848
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||| ||||  ||||| | |||||| |||||||||||||   ||| |||   ||||||| |   ||||| ||||||||||||||    
T  41554735 tcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatggatg 41554834  T
Q  117 atgtgagtttgttc 130  Q
     |||||||||||||    
T  41554835 ttgtgagtttgttc 41554848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 12524533 - 12524417
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||| ||||||  || ||||| | ||  | ||||||||||||| |||||||  ||| ||| | ||||||||||  ||||| ||||||||||     
T  12524533 tcatcaacgttgtagatccaaagacatgattgtttaggagactttaatataatcatatttgtaggcttttgtactttgtcattttatgctattaacatga 12524434  T
Q  114 atgatgtgagtttgttc 130  Q
    ||| |||||||||||||    
T  12524433 atgttgtgagtttgttc 12524417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 18472592 - 18472468
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||| ||||| |||| ||||| ||||| | ||||||  ||||||||||||   ||| |||   ||||||||    ||||| ||||||||||||||    
T  18472592 tcaacgttgtagatctggagacatgagtattccggagacttacatatagtcatatgtgtaggctttagtactttgttgttttatgctattaacatggatg 18472493  T
Q  117 atgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||  |||||||||    
T  18472492 atgtgagtttgttcacagattcatc 18472468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 25962167 - 25962287
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||| |||||||||| ||||  ||||| | | |||| ||||||||||||||  ||| | || ||||||||||   ||||| |||||||||| |||    
T  25962167 tcaacgttgtagatccggagacatggatattccggaaacttgaatatagtcatatttgtaggcatagatactttgtcgttttatgctattaacatgaatg 25962266  T
Q  117 atgtgagtttgttcgtagatt 137  Q
     ||||||||| |||| |||||    
T  25962267 ttgtgagtttcttcgcagatt 25962287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 25770854 - 25770973
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||| ||||||||| || ||||||||||||| ||||||||| |||| | |||||||  ||| ||||| ||||||||||  ||||  |||||| ||| |      
T  25770854 tcaatgttgcagattcgaaggcatgactattatgaagacttgaatacaatcatatttgtaggcttatgtactttgtcattttattctattaagatgaaca 25770953  T
Q  117 atgtgagtttgttcgtagat 136  Q
     |||||||||||||| ||||    
T  25770954 ttgtgagtttgttcgcagat 25770973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 4726797 - 4726740
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| ||||||||||| | ||| || |||||||||||||    
T  4726797 tcatctacgttgcagatccggagacatgactattccggagatttaaatatagtcatat 4726740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 130
Target Start/End: Original strand, 12891977 - 12892010
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||||||||||||||||||||||||||||||||    
T  12891977 ttatgttattaacatggatgatgtgagtttgttc 12892010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 13599279 - 13599320
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattc 138  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  13599279 ttatgttattaacttggatgatgtgagtttgttcgtatattc 13599320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 23428506 - 23428619
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    ||||||||| |||||||||| ||||| ||||  | |||| | ||||||||||||||  ||| | ||  ||||||  |   ||||| ||||||||||||||    
T  23428506 tcaacgttgtagatccggagacatgagtatttcggagacataaatatagtcatatttgtaggcataggtacttttccgttttatgctattaacatggatg 23428605  T
Q  117 atgtgagtttgttc 130  Q
    ||||||||||||||    
T  23428606 atgtgagtttgttc 23428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 32309845 - 32309886
Alignment:
Q  103 tattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  32309845 tattaacatggatgttgtgagtttgttcgcagattcatcttt 32309886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 6281387 - 6281431
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  6281387 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 6281431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 8812021 - 8811905
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||| |||| ||    ||||| | |||||| |||||||||||||   ||| |||   ||||||| |   ||||| |||||||||||    
T  8812021 tcatcaacgttgcagatctggagacaatggtattccggagacttaaatatagtcatatgtgtaggctttagtactttgccgttttatgctattaacatgg 8811922  T
Q  114 atgatgtgagtttgttc 130  Q
    |||||||||||||||||    
T  8811921 atgatgtgagtttgttc 8811905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 11976845 - 11976801
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||    
T  11976845 ttatgttattaacttggatgttgtgagtttgttcgcagattcatc 11976801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 17096019 - 17095975
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  17096019 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 17095975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 26294852 - 26294808
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||    
T  26294852 ttatgctattaacatggatgatgtgagtttgttcacagattcatc 26294808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 2415645 - 2415763
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtc--atattcatagacttatatactttgtcagcttatgttattaacat 111  Q
    ||||| |||||||||||||| || ||||| ||||| |||||| | |||||||||  ||||   ||| | | |||||||||||   ||||| |||||||||    
T  2415645 tcatccacgttgcagatccgaagacatgattattccgaagacataaatatagtcatatatgtgtaggcatttatactttgtcgttttatgctattaacat 2415744  T
Q  112 ggatgatgtgagtttgttc 130  Q
    ||||| ||||||| |||||    
T  2415745 ggatgttgtgagtctgttc 2415763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 6681743 - 6681688
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||| ||||| ||||| ||||| | |||||| ||||||||||||||    
T  6681743 tcaacgttgcagattcggagacatgagtattccggagacttgaatatagtcatatt 6681688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 7771688 - 7771633
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||||| ||||| | |||| | ||||||||||||||    
T  7771688 tcaacgttgcagatccggagacatgagtattccggagacatgaatatagtcatatt 7771633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 141
Target Start/End: Complemental strand, 17067552 - 17067521
Alignment:
Q  110 atggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||||||||||||||||||||||||    
T  17067552 atggatgatgtgagtttgttcgtagattcatc 17067521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 17331582 - 17331637
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| |||||  |||| | |||||| ||||||||||||||    
T  17331582 tcaacgttgcagatccggagacatgaggattccggagacttgaatatagtcatatt 17331637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 20257585 - 20257542
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    |||||||||||| ||||||||||||||||||||  |||||||||    
T  20257585 tatgttattaacttggatgatgtgagtttgttcacagattcatc 20257542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 26293864 - 26293919
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| ||| | ||||| | ||| |||||||||||||||||    
T  26293864 tcaacgttgcagatccggagacataaatattccggagattttaatatagtcatatt 26293919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 29154473 - 29154592
Alignment:
Q  22 gttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtg 121  Q
    ||||||||||||||| ||||| ||||| | ||| || |||||| || |||   |||  || | |||||||||   ||||| |||||||||||||||||||    
T  29154473 gttgcagatccggagacatgagtattccggagagttaaatataatcgtatgtgtaggtttttgtactttgtcgttttatgctattaacatggatgatgtg 29154572  T
Q  122 agtttgttcgtagattcatc 141  Q
    ||| |||||| | |||||||    
T  29154573 agtatgttcgcatattcatc 29154592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 34866679 - 34866806
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||| ||||||||||||||| ||||| ||||  | |||||| ||||| | |||||   ||| ||| | ||||||| |   || || ||||||||||||||    
T  34866679 tcaatgttgcagatccggagacatgaatatttcggagacttgaatatggccatatgtgtagccttttgtactttgacgttttttgctattaacatggatg 34866778  T
Q  117 atgtgagtttgttcgtagattcatcttt 144  Q
     |||||||||||||| | ||||||||||    
T  34866779 ttgtgagtttgttcgcatattcatcttt 34866806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 41358416 - 41358475
Alignment:
Q  142 tttaacgaatttatattg-atcgatgtactctgtcaacttgaatgaatgaatattattca 200  Q
    ||||||||||||| |||  ||||||||||||| |||| |||||||||||||||| |||||    
T  41358416 tttaacgaatttacattatatcgatgtactctatcaatttgaatgaatgaatatcattca 41358475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 131
Target Start/End: Complemental strand, 9425375 - 9425341
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcg 131  Q
    ||||||||||||| |||||||||||||||||||||    
T  9425375 ttatgttattaacttggatgatgtgagtttgttcg 9425341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 144
Target Start/End: Original strand, 27752115 - 27752161
Alignment:
Q  98 tatgttattaacatggatgatgtgagtttgttcgtagattcatcttt 144  Q
    |||| ||||||| |||||| ||||||| |||||||||||||||||||    
T  27752115 tatgctattaacttggatgctgtgagtatgttcgtagattcatcttt 27752161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 194
Target Start/End: Complemental strand, 33164168 - 33164134
Alignment:
Q  160 atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    |||||||||||||||||| ||||||||||||||||    
T  33164168 atcgatgtactctgtcaatttgaatgaatgaatat 33164134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 42512859 - 42512801
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||  |||| | ||| ||||  |||||||||||||||||||||||    
T  42512859 tcatcaacgttgcagatatggagacgtgaatatttcgaagactttaatatagtcatatt 42512801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 3079112 - 3079079
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    |||||||||||||||||||| |||||||||||||    
T  3079112 ttatgttattaacatggatgctgtgagtttgttc 3079079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 3740636 - 3740717
Alignment:
Q  59 aatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    |||||||||||||| |||| | ||  ||||||| |   ||||| || ||||||||||| ||||||||||||| |||||||||    
T  3740636 aatatagtcatatttataggcataggtactttgccgctttatgctagtaacatggatgttgtgagtttgttcatagattcat 3740717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 5378547 - 5378604
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| ||||||||||| | ||| || ||| |||||||||    
T  5378547 tcatccacgttgcagatccggagacatgactattccggagatttaaatgtagtcatat 5378604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 12439467 - 12439434
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  12439467 ttatgctattaacatggatgatgtgagtttgttc 12439434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 17732164 - 17732119
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatct 142  Q
    ||||| |||||||||||||| |||||||||||||  ||||||||||    
T  17732164 ttatgctattaacatggatgttgtgagtttgttcacagattcatct 17732119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 23881928 - 23881863
Alignment:
Q  63 tagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgt 128  Q
    ||||||||||  ||| | || |||||||||| | ||||| |||||||||||||| |||||||||||    
T  23881928 tagtcatatttgtagtcatagatactttgtcggtttatgctattaacatggatgttgtgagtttgt 23881863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 39179657 - 39179580
Alignment:
Q  63 tagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcat 140  Q
    ||||||||||  ||||  ||| |||||||||   ||||| |||||||||||||| ||||||||||||| || ||||||    
T  39179657 tagtcatatttgtagatatatgtactttgtcgttttatgctattaacatggatgttgtgagtttgttcataaattcat 39179580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 39531190 - 39531157
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttc 130  Q
    ||||| ||||||||||||||||||||||||||||    
T  39531190 ttatgctattaacatggatgatgtgagtttgttc 39531157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 6635657 - 6635701
Alignment:
Q  148 gaatttatattg-atcgatgtactctgtcaacttgaatgaatgaa 191  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||    
T  6635657 gaatttatattgtatcgatgtactctatcaatttgaatgaatgaa 6635701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 7771599 - 7771555
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||||||||||||||||| ||||||  |||||||||    
T  7771599 ttatgctattaacatggatgatgtgagcttgttcacagattcatc 7771555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 15710872 - 15710916
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||| | |||||||    
T  15710872 ttatgctattaacatggatgttgtgagtttgttcgcatattcatc 15710916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 17699896 - 17699940
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  17699896 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 17699940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 20483529 - 20483573
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  20483529 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 20483573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 27241398 - 27241442
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| ||||||| |||||| |||||||||||||| |||||||||    
T  27241398 ttatgctattaacgtggatgttgtgagtttgttcgcagattcatc 27241442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 32390450 - 32390406
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||  |||||||||||||| |||||||||    
T  32390450 ttatgctattaacatggatactgtgagtttgttcgcagattcatc 32390406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 33164247 - 33164215
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgtt 129  Q
    ||||| |||||||||||||||||||||||||||    
T  33164247 ttatgctattaacatggatgatgtgagtttgtt 33164215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 37219331 - 37219375
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  37219331 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 37219375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 39308537 - 39308493
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||| || ||||||||||||||||||| |||||||||    
T  39308537 ttatgctattaatatagatgatgtgagtttgttcgcagattcatc 39308493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 39415455 - 39415419
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgta 133  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  39415455 ttatgctattaacatggatgatgtgagtttgtacgta 39415419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 42609401 - 42609453
Alignment:
Q  20 acgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||||| || ||||| | |||| | ||||||||||||||    
T  42609401 acgttgcagatccggaggcaggagtattccggagacataaatatagtcatatt 42609453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 25381 - 25269
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    |||||||||||||||||||| ||||||| |||||| | ||| |||||||||||||||||  ||| | ||| ||||||| ||  ||||| |||||||||||    
T  25381 tcatcaacgttgcagatccgaaggcatggctattccggagattttaatatagtcatatttgtaggcctatgtactttgccattttatgctattaacatgg 25282  T
Q  114 atgatgtgagttt 126  Q
    ||| |||||||||    
T  25281 atgttgtgagttt 25269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 105285 - 105363
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgt 92  Q
    |||||||||||||||||||||||||||| |||||  | ||| |||||||||||||||||  ||| ||||||||||||||    
T  105285 tcatcaacgttgcagatccggaggcatggctatttcggagattttaatatagtcatatttgtaggcttatatactttgt 105363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 12072 - 11945
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||| ||||||||||||||||| ||||  ||||| | ||| || |||||||||| || | ||| | | | ||||||||||  ||||| |||||||||||    
T  12072 tcatccacgttgcagatccggagacatggttattccggagatttaaatatagtcacatgcgtaggcatttgtactttgtcattttatgctattaacatgg 11973  T
Q  114 atgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||  |||||  |||||||||    
T  11972 atgatgtgagcatgttcacagattcatc 11945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 35338 - 35451
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||||||  ||||| ||||| | |||||| ||||| |||||||| |||| | ||| ||||||      ||||| ||||||||||||||    
T  35338 tcaacgttgcagatccggatacatgagtattccggagacttgaatattgtcatatttataggcatatgtactttactgttttatgctattaacatggatg 35437  T
Q  117 atgtgagtttgttc 130  Q
     |||||||||||||    
T  35438 ttgtgagtttgttc 35451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 94111 - 93999
Alignment:
Q  85 tactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc--tttaacgaatttatatt-gatcgatgtactctgtcaacttg 181  Q
    ||||||||||  |||||||||||||||||||| ||||||| |||||  | ||| |||  ||||||||||||  |||  ||||||||||||| |||| |||    
T  94111 tactttgtcattttatgttattaacatggatgttgtgagtctgttcacaaatttatccttttaacgaatttgcattatatcgatgtactctttcaatttg 94012  T
Q  182 aatgaatgaatat 194  Q
    ||||||| |||||    
T  94011 aatgaattaatat 93999  T

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Target: scaffold0536 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 3238 - 3282
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||    
T  3238 ttatgctattaacatggatgatgtgagtttgttcatagattcatc 3282  T

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Target: scaffold0536; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 3305 - 3351
Alignment:
Q  149 aatttatattg-atcgatgtactctgtcaacttgaatgaatgaatat 194  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  3305 aatttatattgtatcgatgtactctatcaatttgaatgaatgaatat 3351  T

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Target: scaffold0388 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 10197 - 10261
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagactt 81  Q
    ||||||||||||||||||| |||| |||||| ||  ||||| |||||||||||||| ||||||||    
T  10197 tcaacgttgcagatccggatgcataactattttggggacttcaatatagtcatatttatagactt 10261  T

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Target: scaffold0056 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 74413 - 74473
Alignment:
Q  12 catcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| |||||||||||||||||||| ||||| ||||| |||||| | ||||||||||||||    
T  74413 catcgtcaacgttgcagatccggagacatgagtattccgaagacatgaatatagtcatatt 74473  T

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Target: scaffold0432 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 2309 - 2254
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||| ||||||||||||||| ||||| ||||||| |||||| ||||||||||||||    
T  2309 tcaatgttgcagatccggagacatgagtattctggagacttgaatatagtcatatt 2254  T

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Target: scaffold0340 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 11642 - 11451
Alignment:
Q  17 tcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatg 116  Q
    |||||||||||||||| ||  ||||  ||||||| |||||| |||||||||||||   ||| |||  |||||||  ||  |||||| | |||||||||||    
T  11642 tcaacgttgcagatccagaaacatgggtattctggagacttaaatatagtcatatgtgtaggctttaatactttaccattttatgtcactaacatggatg 11543  T
Q  117 atgtgagtttgttcgtagattcatc---------tttaacgaatttatatt-gatcgatgtactctgtcaacttgaatgaatgaatattatt 198  Q
     ||||||||||||   |||||||||         ||||||||||||  |||  ||||||||||||| | || ||||||||||||||||||||    
T  11542 ttgtgagtttgttaacagattcatccttttttattttaacgaattttcattatatcgatgtactctattaatttgaatgaatgaatattatt 11451  T

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Target: scaffold0999 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 1949 - 2065
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatgg 113  Q
    ||||||||||||||||||  ||| ||| | ||||| | |||| | | ||||||| ||||  ||| | ||| |||||||||   ||||| |||| ||||||    
T  1949 tcatcaacgttgcagatcgagagacataagtattccggagacatgattatagtcgtatttgtaggcatatgtactttgtcgttttatgctattgacatgg 2048  T
Q  114 atgatgtgagtttgttc 130  Q
    |||||||||||||||||    
T  2049 atgatgtgagtttgttc 2065  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 3879 - 3801
Alignment:
Q  63 tagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||||||||  ||| | ||||||||||| |   ||||| |||||||||||||| |||||||||||||  |||||||||    
T  3879 tagtcatatttgtaggcatatatactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatc 3801  T

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Target: scaffold0722 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 5395 - 5338
Alignment:
Q  14 tcatcaacgttgcagatccggaggcatgactattctgaagactttaatatagtcatat 71  Q
    ||||| ||||||||||||||||| |||| |||||| | ||| || |||||||||||||    
T  5395 tcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatat 5338  T

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Target: scaffold0321 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 6995 - 6942
Alignment:
Q  19 aacgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    |||||||||||||||||| ||||| ||||||  |||| | ||||||||||||||    
T  6995 aacgttgcagatccggagacatgagtattcttgagacatgaatatagtcatatt 6942  T

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Target: scaffold0321; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 6908 - 6864
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||  |||||||||    
T  6908 ttatgctattaacatggatgttgtgagtttgttcacagattcatc 6864  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 1002 - 961
Alignment:
Q  22 gttgcagatccggaggcatgactattctgaagactttaatat 63  Q
    ||||||||||||||| ||||| |||||||||||||| |||||    
T  1002 gttgcagatccggagacatgagtattctgaagacttgaatat 961  T

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Target: scaffold1294 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 1050 - 1150
Alignment:
Q  44 tattctgaagactttaatatagtcatattcatagacttatatactttgtcagcttatgttattaacatggatgatgtgagtttgttcgtagattcatctt 143  Q
    ||||| || ||||| |||||||||||||   ||| ||| | |||||||||   ||||| ||||||||| |||   ||||||||||| |||||||||||||    
T  1050 tattccgatgacttgaatatagtcatatgtgtaggcttttgtactttgtcgttttatgctattaacatagataccgtgagtttgttggtagattcatctt 1149  T
Q  144 t 144  Q
    |    
T  1150 t 1150  T

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Target: scaffold0288 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 20936 - 20968
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgtt 129  Q
    ||||| |||||||||||||||||||||||||||    
T  20936 ttatgctattaacatggatgatgtgagtttgtt 20968  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 21227 - 21279
Alignment:
Q  20 acgttgcagatccggaggcatgactattctgaagactttaatatagtcatatt 72  Q
    ||||||| ||| ||||| ||||| ||||||| |||||| ||||||||||||||    
T  21227 acgttgccgattcggagacatgagtattctggagacttgaatatagtcatatt 21279  T

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Target: scaffold0150 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 10115 - 10071
Alignment:
Q  97 ttatgttattaacatggatgatgtgagtttgttcgtagattcatc 141  Q
    ||||| |||||||||||||| |||||||||||||| | |||||||    
T  10115 ttatgctattaacatggatgttgtgagtttgttcgcaaattcatc 10071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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