View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2562_low_38 (Length: 314)
Name: NF2562_low_38
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2562_low_38 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 31925518 - 31925804
Alignment:
| Q |
16 |
caaaatagacagtcttattaataactttatatctccaataannnnnnn-ctcttcatttagtacttaagactaagagctgaagagtttctcactttcatg |
114 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31925518 |
caaaatagacagtcttattaataactttatatctccaataattttttttctcttcatttagtacttaagactaagagctgaagagtttctcactttcatg |
31925617 |
T |
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| Q |
115 |
agcaggcgtatcactccttatcggaatgtgacttcaaccaagggcatggaaagaagcatctcaggttcatcaaatggaaattccttgaatccaaggttag |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31925618 |
agcaggcgtatcactccttatcggaatgtgacttcaaccaagggcatggaaagaagcatctcaggttcatcaaatggaaattccttgaatccaaggttag |
31925717 |
T |
|
| Q |
215 |
ttatgctatcaatatcaatattgactaaatacttaccaccaaaagataaaccatgaagttatcggatcctagtcacattcttttata |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
31925718 |
ttatgctatcaatatcaatattgactaaatacttaccaccaaaagataaaccatgaagttatccgatcctagtcacattcttttata |
31925804 |
T |
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