View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2562_low_41 (Length: 302)
Name: NF2562_low_41
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2562_low_41 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 16 - 291
Target Start/End: Original strand, 32426302 - 32426577
Alignment:
| Q |
16 |
attaatgcattgaccttaccaaccgagctaacctctcgaggacatacttttagtcatttaactcttatttataattaaagaactctgaatttaaaacatg |
115 |
Q |
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| T |
32426302 |
attaatgcattgaccttaccaactgagttaagctctcgatgacatatttttagtcatttaactcttatttataattaaagaactctgaatttaaaacatg |
32426401 |
T |
|
| Q |
116 |
ttaccaactttattttgtgtctagtgttgcaagctaaagaaaaatatcagtcatggtagcaaaatctgtaatacatctaattcctaatataaaaaagata |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
32426402 |
ttaccaactttattttgtgtctagtgttgcaagctaaagaaaaatatcagtcatggtagcaaaatttgtaatacatctaattcctaatataaaaaagata |
32426501 |
T |
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| Q |
216 |
aatatgtttgaaaattccgttgttacatataaattggtttctacacataagttcaagtagcatgtcttttgttcat |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32426502 |
aatatgtttgaaaattccgttgttacatataaattggtttctacacataagttcaagtagcatgtcttttgttcat |
32426577 |
T |
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