View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2562_low_43 (Length: 289)
Name: NF2562_low_43
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2562_low_43 |
 | |
|
| [»] chr6 (43 HSPs) |
| |
|
| [»] chr8 (2 HSPs) |
| |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0038 (3 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 281; Significance: 1e-157; HSPs: 43)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 26803080 - 26803368
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26803080 |
tcagcccttacatgttgctaattaccctgttggattgcactctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
26803179 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26803180 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
26803279 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagttagat |
289 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26803280 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagttagat |
26803368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 5 - 289
Target Start/End: Complemental strand, 27705948 - 27705664
Alignment:
| Q |
5 |
cccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttg |
104 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27705948 |
cccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcacttcttgatgagggacctgatgatggggtccatatggttg |
27705849 |
T |
|
| Q |
105 |
gaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
204 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27705848 |
gaatttttggcattggaggcttgggtaaatcaacacttgcaagagcaatttataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
27705749 |
T |
|
| Q |
205 |
gagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagttagat |
289 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
27705748 |
gagagagaattcagctcaaaatgacttgaaacatctccaagagaagcttcttctaaaaacaactggatcgaaaataaagttagat |
27705664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 4 - 285
Target Start/End: Original strand, 26623908 - 26624189
Alignment:
| Q |
4 |
gcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggtt |
103 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||| | ||||| |||||||||| ||||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
26623908 |
gcccttacatgttgctaaataccctgttggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgatggggtccatatggtt |
26624007 |
T |
|
| Q |
104 |
ggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
203 |
Q |
| |
|
||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26624008 |
ggaatgtatgggattggaggcttgggcaaatcaacacttgcaagagcaatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
26624107 |
T |
|
| Q |
204 |
tgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagtt |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||| ||||| |
|
|
| T |
26624108 |
tgagagagaattcagctcaaaataacttgaaacatctccaagagaagctcctttttaaaacaactggattggaaattaagtt |
26624189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 4 - 285
Target Start/End: Original strand, 26729885 - 26730166
Alignment:
| Q |
4 |
gcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggtt |
103 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||| | ||||| |||||||||| ||||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
26729885 |
gcccttacatgttgctaaataccctgttggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgatggggtccatatggtt |
26729984 |
T |
|
| Q |
104 |
ggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
203 |
Q |
| |
|
||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26729985 |
ggaatgtatgggattggaggcttgggcaaatcaacacttgcaagagcaatctataactttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
26730084 |
T |
|
| Q |
204 |
tgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagtt |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||| ||||| |
|
|
| T |
26730085 |
tgagagagaattcagctcaaaataacttgaaacatctccaagagaagctcctttttaaaacaactggattggaaattaagtt |
26730166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 288
Target Start/End: Original strand, 27679585 - 27679871
Alignment:
| Q |
2 |
cagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatgg |
101 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
27679585 |
cagcccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggatccgatgatggggtccatatgg |
27679684 |
T |
|
| Q |
102 |
ttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatga |
201 |
Q |
| |
|
||||||||||||| |||||||| ||||| |||||| ||||||||||| |||||||||||||||||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
27679685 |
ttggaatttatggcattggaggtttggggaaatcaacacttgcaagacaaatctataattttgttgcagatcaattcgaaggttcatgttttcttcatga |
27679784 |
T |
|
| Q |
202 |
tgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagttaga |
288 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| || ||| |||| |||||||| |
|
|
| T |
27679785 |
tgtgagagagaattcagctcaaaataacttgaaatatctccaagagaagctccttttaaaaacaacaggtttggaaattaagttaga |
27679871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 27698134 - 27697863
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||| |||||||| | ||| |||||||||||||||||||| |
|
|
| T |
27698134 |
tcagcccttacatgttgccaattaccctgttggattacagtctcaagtacaaagagtgaaatcaattcttgataatggatctgatgatggggtccatatg |
27698035 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
27698034 |
gttggaatttttgggattggaggcttgggaaaatcaacacttgcaagagcaatctataatttggttgctgatcaatttgaaggtttatgttttcttcata |
27697935 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggat |
272 |
Q |
| |
|
|||||||| |||||||||| ||||||||||| ||||||||||||||||||| ||| | ||||||||||||| |
|
|
| T |
27697934 |
atgtgagaatgaattcagctaaaaataacttggaacatctccaagagaagctcctttttaaaacaactggat |
27697863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 27427155 - 27426925
Alignment:
| Q |
6 |
ccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgg |
105 |
Q |
| |
|
||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27427155 |
ccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgg |
27427056 |
T |
|
| Q |
106 |
aatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtg |
205 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || |
|
|
| T |
27427055 |
aatttatgggattggaggctcaggtaaatcaacacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtc |
27426956 |
T |
|
| Q |
206 |
agagagaattcagctcaaaataacttgaaac |
236 |
Q |
| |
|
||||||||||||||| ||||| |||||||| |
|
|
| T |
27426955 |
agagagaattcagcttcaaatagcttgaaac |
27426925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 31285196 - 31285480
Alignment:
| Q |
4 |
gcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggtt |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||| |||| ||||| ||||||||| |||||||||| ||| | || || | ||||| || ||||| |
|
|
| T |
31285196 |
gcccttacatgttgccaattaccctgttggatttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtacacatggta |
31285295 |
T |
|
| Q |
104 |
ggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
203 |
Q |
| |
|
||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| || ||||||||||||||||||| |
|
|
| T |
31285296 |
ggactttatgggataggaggcttgggtaaatcaacacttgcaagagcaatctataattttattggtgatcaatttgacggattatgttttcttcatgatg |
31285395 |
T |
|
| Q |
204 |
tgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagttaga |
288 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||| ||| | ||||||| ||||||| |||| |||||||| |
|
|
| T |
31285396 |
tgagagagaattcagctaaaaataacttgaaacatctccaagagaagctccttttgaaaacaattggattggaaattaagttaga |
31285480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 5 - 265
Target Start/End: Complemental strand, 27677164 - 27676904
Alignment:
| Q |
5 |
cccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttg |
104 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| |||||||||||||| || ||||||||||||||||||| ||| ||||| |||||||||||||||||| |
|
|
| T |
27677164 |
cccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaaatgaaatcgcttcttgatgaaggatctgatcatggggtccatatggttg |
27677065 |
T |
|
| Q |
105 |
gaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
204 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| | |||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||| |
|
|
| T |
27677064 |
gaatttatgggattggaggcttgggaaaatcaacacttgcgaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgt |
27676965 |
T |
|
| Q |
205 |
gagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|| ||||| ||||||| ||||||||||||| ||||||| || |||| ||| |||||||| |
|
|
| T |
27676964 |
gaaagagagttcagcttcaaataacttgaaaaatctccagcaggagctccttttaaaaaca |
27676904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 265
Target Start/End: Complemental strand, 27592568 - 27592305
Alignment:
| Q |
2 |
cagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatgg |
101 |
Q |
| |
|
||||||||| ||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||| |
|
|
| T |
27592568 |
cagcccttaaatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatcatggggtccatatgg |
27592469 |
T |
|
| Q |
102 |
ttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatga |
201 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||||| | |||||| ||||| ||| ||||||||||||||||| | | |||||||||| | | |
|
|
| T |
27592468 |
ttggaatttatgggattggaggcttgggaaaatcaacacttgcgaaagcaatttataactttattgctgatcaatttgaatgctcatgttttcttgaaaa |
27592369 |
T |
|
| Q |
202 |
tgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
||||| ||||| ||||||| ||||||||||||| ||||||| || |||| ||| |||||||| |
|
|
| T |
27592368 |
tgtgaaagagagttcagcttcaaataacttgaaaaatctccagcaggagctccttttaaaaaca |
27592305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 28786872 - 28787136
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||| |||| ||| |
|
|
| T |
28786872 |
tcagcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatg |
28786971 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||||||||| |||||| || |||||| ||||||||| || |||||||||||||| | | |||||||||| | |
|
|
| T |
28786972 |
gtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaa |
28787071 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||| ||| ||| ||| |||||||| |
|
|
| T |
28787072 |
atgtgagagagaattcagcttcaaataaattgaaacatctccaggaggtgctccttttaaaaaca |
28787136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 27604252 - 27603988
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| ||||| ||| |||||||| |||||||||||||| |||||||||| ||||||||||| || |||||||||| ||||| ||| |
|
|
| T |
27604252 |
tcagcccttacatgttgccaattatcctattggattgcagtctcgagtacaacaagtgaaatctcttcttgatgaaagatctgatgatggagtccacatg |
27604153 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
|| ||| ||||||| | |||||| |||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| | | |||||||||| | |
|
|
| T |
27604152 |
gtaggactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaa |
27604053 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||| ||| |||| ||| |||||||| |
|
|
| T |
27604052 |
atgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaaca |
27603988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 265
Target Start/End: Complemental strand, 27610664 - 27610404
Alignment:
| Q |
5 |
cccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttg |
104 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || |||||||||| ||||| ||||| | |
|
|
| T |
27610664 |
cccttacatgttgccaattaccctgttggattgcagtctcaagtacaagaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtag |
27610565 |
T |
|
| Q |
105 |
gaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
204 |
Q |
| |
|
|| ||||||| | |||||| |||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||| |
|
|
| T |
27610564 |
gactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgt |
27610465 |
T |
|
| Q |
205 |
gagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
||||||||||||| || |||||| ||||||||||| || ||| |||| ||| |||||||| |
|
|
| T |
27610464 |
gagagagaattcaacttcaaataaattgaaacatcttcaggaggagctccttttaaaaaca |
27610404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 5 - 265
Target Start/End: Complemental strand, 27718043 - 27717783
Alignment:
| Q |
5 |
cccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttg |
104 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || |||||||||| ||||| ||||| | |
|
|
| T |
27718043 |
cccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtag |
27717944 |
T |
|
| Q |
105 |
gaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
204 |
Q |
| |
|
|| ||||||| | |||||| |||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||| |
|
|
| T |
27717943 |
gactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgt |
27717844 |
T |
|
| Q |
205 |
gagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
||||||||||||| || |||||| ||||||||||| || || |||| ||| |||||||| |
|
|
| T |
27717843 |
gagagagaattcaacttcaaataaattgaaacatcttcagaaggagctccttttaaaaaca |
27717783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 28792993 - 28793257
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||| |||| ||| |
|
|
| T |
28792993 |
tcagcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatg |
28793092 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||||||||| |||||| || |||||| ||||||||| || |||||||||||||| | | |||||||||| | |
|
|
| T |
28793093 |
gtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaa |
28793192 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||||||||||| ||||||| ||||| |||||||||||||| ||| ||| ||| |||||||| |
|
|
| T |
28793193 |
atgtgagagagagttcagcttcaaatagattgaaacatctccaggaggtgctccttttaaaaaca |
28793257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 26656606 - 26656850
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaa |
107 |
Q |
| |
|
||||||||||| || |||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||| || | |||| ||| | ||||| ||| |
|
|
| T |
26656606 |
ttacatgttgccaaataccctgttggattagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggac |
26656705 |
T |
|
| Q |
108 |
tttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgag |
207 |
Q |
| |
|
||||||| | ||||||| ||||||||||| ||||||| | |||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||| || |
|
|
| T |
26656706 |
tttatggtactggaggcatgggtaaatcaacacttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcag |
26656805 |
T |
|
| Q |
208 |
agagaattcagctcaaaataacttgaaacatctccaagagaagct |
252 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||| |||| |
|
|
| T |
26656806 |
agagaattcagctcataataatttgaaacatctccaggaggagct |
26656850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 26762577 - 26762821
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaa |
107 |
Q |
| |
|
||||||||||| || |||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||| || | |||| ||| | ||||| ||| |
|
|
| T |
26762577 |
ttacatgttgccaaataccctgttggattagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggac |
26762676 |
T |
|
| Q |
108 |
tttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgag |
207 |
Q |
| |
|
||||||| | ||||||| ||||||||||| ||||||| | |||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||| || |
|
|
| T |
26762677 |
tttatggtactggaggcatgggtaaatcaacacttgccaaagcaatttataattttgtcgctgatcaatttgaaggtgtatgttttcttcacaatgtcag |
26762776 |
T |
|
| Q |
208 |
agagaattcagctcaaaataacttgaaacatctccaagagaagct |
252 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||| |||| |
|
|
| T |
26762777 |
agagaattcagctcataataatttgaaacatctccaggaggagct |
26762821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 26647120 - 26647355
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaa |
107 |
Q |
| |
|
|||||||| || || |||||||||||||| |||| ||| || || ||||||||| |||||||||| | | | ||||||| |||||||||||||| ||| |
|
|
| T |
26647120 |
ttacatgtagccaaataccctgttggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggac |
26647219 |
T |
|
| Q |
108 |
tttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgag |
207 |
Q |
| |
|
||||||| | |||||| |||||||||||| ||||||| | ||| || |||||||||||||||||||||||||||||| |||| ||||||||| |||| || |
|
|
| T |
26647220 |
tttatggtactggaggtttgggtaaatcaacacttgccaaagcgatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcag |
26647319 |
T |
|
| Q |
208 |
agagaattcagctcaaaataacttgaaacatctcca |
243 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26647320 |
agagaattcagctcataataacttgaaacatctcca |
26647355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 26753088 - 26753323
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaa |
107 |
Q |
| |
|
|||||||| || || |||||||||||||| |||| ||| || || ||||||||| |||||||||| | | | ||||||| |||||||||||||| ||| |
|
|
| T |
26753088 |
ttacatgtagccaaataccctgttggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggac |
26753187 |
T |
|
| Q |
108 |
tttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgag |
207 |
Q |
| |
|
||||||| | |||||| |||||||||||| ||||||| | ||| || |||||||||||||||||||||||||||||| |||| ||||||||| |||| || |
|
|
| T |
26753188 |
tttatggtactggaggtttgggtaaatcaacacttgccaaagcgatttataattttgttgctgatcaatttgaaggtgtatgctttcttcataatgtcag |
26753287 |
T |
|
| Q |
208 |
agagaattcagctcaaaataacttgaaacatctcca |
243 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26753288 |
agagaattcagctcataataacttgaaacatctcca |
26753323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 23 - 265
Target Start/End: Original strand, 26862236 - 26862478
Alignment:
| Q |
23 |
taccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggag |
122 |
Q |
| |
|
|||||||||||||| ||||| |||||| || ||||||||| |||||||||| || | ||||||| ||||| || ||||| ||| ||||||| | ||||| |
|
|
| T |
26862236 |
taccctgttggattaaagtcccgagtagaacaagtgaaattgcttcttgatatggaatctgatgaaggggtacacatggtaggactttatggtactggag |
26862335 |
T |
|
| Q |
123 |
gcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctca |
222 |
Q |
| |
|
|| |||| |||||| ||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||||||||| | || |||||||||||| |||| |
|
|
| T |
26862336 |
gcatggggaaatcaacacttgcaaaagcaatttataattttgttgccgatcaatttgaaggtgtatgttttcttcataaagttagagagaattcaactca |
26862435 |
T |
|
| Q |
223 |
aaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||| ||||||||||||||| || |||||||| |||||||| |
|
|
| T |
26862436 |
taatagcttgaaacatctccagaaggagcttcttttaaaaaca |
26862478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 27337635 - 27337401
Alignment:
| Q |
9 |
tacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaat |
108 |
Q |
| |
|
|||| ||||| || |||||||||||||| |||| ||||||||| |||| |||| |||||||||||||| | ||||||| |||||| | ||||| ||| | |
|
|
| T |
27337635 |
tacacgttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggact |
27337536 |
T |
|
| Q |
109 |
ttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgaga |
208 |
Q |
| |
|
|||||| | | |||||||||| |||||| ||||||||| |||||| |||||||| ||||||||||||||||||| |||| ||||||||| |||| ||| |
|
|
| T |
27337535 |
ttatggtactagaggcttgggaaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttaga |
27337436 |
T |
|
| Q |
209 |
gagaattcagctcaaaataacttgaaacatctcca |
243 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| |
|
|
| T |
27337435 |
gagaattcagctcgtaaaaacttgaaacatctcca |
27337401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 27398375 - 27398141
Alignment:
| Q |
9 |
tacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaat |
108 |
Q |
| |
|
|||| ||||| || |||||||||||||| |||| ||||||||| |||| |||| |||||||||||||| | ||||||| |||||| | ||||| ||| | |
|
|
| T |
27398375 |
tacacgttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggact |
27398276 |
T |
|
| Q |
109 |
ttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgaga |
208 |
Q |
| |
|
|||||| | | |||||||||| |||||| ||||||||| |||||| |||||||| ||||||||||||||||||| |||| ||||||||| |||| ||| |
|
|
| T |
27398275 |
ttatggtactagaggcttgggaaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggagtatgctttcttcataatgttaga |
27398176 |
T |
|
| Q |
209 |
gagaattcagctcaaaataacttgaaacatctcca |
243 |
Q |
| |
|
||||||||||||| || ||||||||||||||||| |
|
|
| T |
27398175 |
gagaattcagctcgtaaaaacttgaaacatctcca |
27398141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 262
Target Start/End: Original strand, 28781735 - 28781996
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||||||||||| ||| ||| |||| |||| ||| ||| |
|
|
| T |
28781735 |
tcagcacttacatgttgccaattaccctgttggattacagtcccgagtacaacaagtgaaatcgcttcttggtgaaggatatgataatggagtcaggatg |
28781834 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||||||||| |||||| || |||| | ||||| || ||||||||||||||||| | | |||||||||| | |
|
|
| T |
28781835 |
gtaggactttatggtactggaggcttgggtaaatcaacacttgtaaaagcagtttataacttaattgctgatcaatttgaatgctcatgttttcttgaaa |
28781934 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaa |
262 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||| ||| |||| ||| ||||| |
|
|
| T |
28781935 |
atgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaa |
28781996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 8 - 266
Target Start/End: Original strand, 26884711 - 26884969
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaa |
107 |
Q |
| |
|
|||||||| || || |||||||||||||| ||| ||||||||| || | |||| |||||||||| ||| | || | || ||||| || ||||| |||| |
|
|
| T |
26884711 |
ttacatgtagccaaataccctgttggattacagtaccgagtacaacaattaaaattgcttcttgataaggaatctaacgaaggggtacacatggtaggaa |
26884810 |
T |
|
| Q |
108 |
tttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgag |
207 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||| |||||| ||||||| ||||||||||||||||||| || |||||||||| ||| | || || |
|
|
| T |
26884811 |
tttatggtactggaggcttgggtaaatcaacacttgcaaaagcaatttataattatgttgctgatcaatttgaatgtgtatgttttctgcataaagtcag |
26884910 |
T |
|
| Q |
208 |
agagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaa |
266 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||| ||| | || ||| ||||||||| |
|
|
| T |
26884911 |
ggagaattcaactcataataacttgaaacatctccaggaggaactccttttaaaaacaa |
26884969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 23 - 243
Target Start/End: Original strand, 25580378 - 25580598
Alignment:
| Q |
23 |
taccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggag |
122 |
Q |
| |
|
|||||||||||||| |||| ||| || || ||||||||| ||||||||| ||| |||| |||| |||||| ||||| ||| ||||||| | ||||| |
|
|
| T |
25580378 |
taccctgttggattacagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgaggatgtggtccacatggtaggactttatggtactggag |
25580477 |
T |
|
| Q |
123 |
gcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctca |
222 |
Q |
| |
|
|| ||||||||||| ||||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| || |
|
|
| T |
25580478 |
gcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagatttcaattct |
25580577 |
T |
|
| Q |
223 |
aaataacttgaaacatctcca |
243 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
25580578 |
taataacttgaaacatctcca |
25580598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 23 - 243
Target Start/End: Original strand, 26143524 - 26143744
Alignment:
| Q |
23 |
taccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggag |
122 |
Q |
| |
|
|||||||||||||| |||| ||| || |||||||||||| ||||||||| ||| |||| |||| ||||| ||||| ||| ||| ||| | ||||| |
|
|
| T |
26143524 |
taccctgttggattacagtcccgaatagaagaagtgaaattgcttcttgacatgggctctgaggatgaggtccgcatggtaggactttttggtactggag |
26143623 |
T |
|
| Q |
123 |
gcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctca |
222 |
Q |
| |
|
|| ||||||||||| ||||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||| |
|
|
| T |
26143624 |
gcatgggtaaatcaacacttgcaaaagcagtttataattttgttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtca |
26143723 |
T |
|
| Q |
223 |
aaataacttgaaacatctcca |
243 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
26143724 |
taataacctgaaacatctcca |
26143744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 25492860 - 25492625
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaa |
107 |
Q |
| |
|
||||||||||| || |||||||||||||| | || ||||||||| | ||||||| |||||| ||||||| | |||| |||| | |||| ||||| ||| |
|
|
| T |
25492860 |
ttacatgttgccaaataccctgttggattacaatcccgagtacaacacgtgaaattgcttctagatgaggtatctgaggatgagttccacatggtaggac |
25492761 |
T |
|
| Q |
108 |
tttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgag |
207 |
Q |
| |
|
||||||| | ||||||||| ||||||||| ||||||||| | |||||||||| || ||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
25492760 |
tttatggtactggaggcttaggtaaatcaacacttgcaaaatcaatctataacttcattgctgatcaatttgaaggtttatgttttctaggagatgtgag |
25492661 |
T |
|
| Q |
208 |
agagaattcagctcaaaataacttgaaacatctcca |
243 |
Q |
| |
|
|||||||||| ||| || ||||||||| ||||||| |
|
|
| T |
25492660 |
agagaattcaactccaagaaacttgaaagatctcca |
25492625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 265
Target Start/End: Complemental strand, 27530847 - 27530585
Alignment:
| Q |
3 |
agcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggt |
102 |
Q |
| |
|
|||||||| ||||||| || || ||||||||||| |||| ||||||||| | |||||| || ||||||||| | ||||||||| |||||| ||||| |
|
|
| T |
27530847 |
agcccttagatgttgccaaatatcctgttggattacagtcccgagtacaacatgtgaaagggcatcttgatgaaaaatctgatgatgaggtccacatggt |
27530748 |
T |
|
| Q |
103 |
tggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgat |
202 |
Q |
| |
|
||| ||||||| | ||||||| | ||||||||| ||||||||| |||||| |||||||| |||||||||||||||||| |||||||||||| | || |
|
|
| T |
27530747 |
aggactttatggtactggaggcataggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaagttttatgttttctagaaaat |
27530648 |
T |
|
| Q |
203 |
gtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
||||||| |||||| || | ||||||||||||||||||||||||| || ||| |||||||| |
|
|
| T |
27530647 |
gtgagagtgaattcgacttcagataacttgaaacatctccaagagaaactccttttaaaaaca |
27530585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 25539199 - 25539428
Alignment:
| Q |
23 |
taccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggag |
122 |
Q |
| |
|
|||||||||||||| |||| | | || || ||||||||| ||||||||| ||| |||| |||| ||||| ||||| ||| ||||||| | ||||| |
|
|
| T |
25539199 |
taccctgttggattacagtccccaatagaacaagtgaaattgcttcttgacttgggctctgaggatgaggtccgcatggtaggactttatggtactggag |
25539298 |
T |
|
| Q |
123 |
gcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctca |
222 |
Q |
| |
|
|| ||||||||||| ||||||||| |||| | | |||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||||| ||| |
|
|
| T |
25539299 |
gcatgggtaaatcaacacttgcaaaagcagtttttaattttgttgctgatcaatttgaagttgtatgttttcttcataatgtcagagagaattcaagtca |
25539398 |
T |
|
| Q |
223 |
aaataacttgaaacatctccaagagaagct |
252 |
Q |
| |
|
||||||||||||||||||||| ||||||| |
|
|
| T |
25539399 |
taataacttgaaacatctccaaaagaagct |
25539428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 8 - 271
Target Start/End: Original strand, 26824460 - 26824723
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaa |
107 |
Q |
| |
|
||||||||||| || ||||| |||||||| |||| ||||||||| |||||||||| ||||||||| | | | ||||||||| |||||||||||| ||| |
|
|
| T |
26824460 |
ttacatgttgccaaatacccggttggattacagtcccgagtacaacaagtgaaatctcttcttgataacgaatctgatgatgtggtccatatggtaggac |
26824559 |
T |
|
| Q |
108 |
tttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgag |
207 |
Q |
| |
|
|||| || |||||||| || ||||||||| ||||||||| ||||| | ||||| | |||||||| ||||||||| ||| ||||||||| | | ||||| |
|
|
| T |
26824560 |
tttacggtattggaggtttaggtaaatcaacacttgcaaaagcaacttttaattctattgctgataaatttgaagttttttgttttcttgagaacgtgag |
26824659 |
T |
|
| Q |
208 |
agagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactgga |
271 |
Q |
| |
|
||||||||||||| | || |||| || ||||||||||| | || ||| ||||||||| |||| |
|
|
| T |
26824660 |
agagaattcagctaagcatggcttggaaaatctccaagagcaactccttttaaaaacaattgga |
26824723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 25483715 - 25483936
Alignment:
| Q |
23 |
taccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggag |
122 |
Q |
| |
|
|||||||||||||| |||| ||| || || ||||||||| ||||||||| ||| |||| |||| ||||| ||||| ||| ||| ||| | ||||| |
|
|
| T |
25483715 |
taccctgttggattacagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgaggatgaggtccgcatggtaggactttttggtactggag |
25483814 |
T |
|
| Q |
123 |
gcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctca |
222 |
Q |
| |
|
|| ||||||||||| ||||||||| |||| | | ||||||| |||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||| |
|
|
| T |
25483815 |
gcatgggtaaatcaacacttgcaaaagcagtttttaattttcttgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaagtca |
25483914 |
T |
|
| Q |
223 |
aaataacttgaaacatctccaa |
244 |
Q |
| |
|
|||||| |||||||||||||| |
|
|
| T |
25483915 |
taataacctgaaacatctccaa |
25483936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 26056578 - 26056807
Alignment:
| Q |
23 |
taccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggag |
122 |
Q |
| |
|
||||||||||||||| |||| ||| || || ||||||||| ||||||||| ||| |||| ||| ||||| ||||| ||||||| ||| | |||| |
|
|
| T |
26056578 |
taccctgttggattgcagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgagaatgaggtccgcatggtaggaatttttggtaccggag |
26056677 |
T |
|
| Q |
123 |
gcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctca |
222 |
Q |
| |
|
|| ||||||||||| ||||||||| |||| | | ||||| | |||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||| |
|
|
| T |
26056678 |
gcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactct |
26056777 |
T |
|
| Q |
223 |
aaataacttgaaacatctccaagagaagct |
252 |
Q |
| |
|
|| ||||||||||||||||| ||||||| |
|
|
| T |
26056778 |
taagaacttgaaacatctccagaagaagct |
26056807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 26076548 - 26076777
Alignment:
| Q |
23 |
taccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggag |
122 |
Q |
| |
|
||||||||||||||| |||| ||| || || ||||||||| ||||||||| ||| |||| ||| ||||| ||||| ||||||| ||| | |||| |
|
|
| T |
26076548 |
taccctgttggattgcagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgagaatgaggtccgcatggtaggaatttttggtaccggag |
26076647 |
T |
|
| Q |
123 |
gcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctca |
222 |
Q |
| |
|
|| ||||||||||| ||||||||| |||| | | ||||| | |||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||| |
|
|
| T |
26076648 |
gcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaggtgtatgttttcttcataatgtcagagagaattcaactct |
26076747 |
T |
|
| Q |
223 |
aaataacttgaaacatctccaagagaagct |
252 |
Q |
| |
|
|| ||||||||||||||||| ||||||| |
|
|
| T |
26076748 |
taagaacttgaaacatctccagaagaagct |
26076777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 25511645 - 25511777
Alignment:
| Q |
120 |
gaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagc |
219 |
Q |
| |
|
||||| ||||||||||| ||||||||| |||| | | ||||| | ||||||||||||||||| || |||||||||||||| |||| |||||||||||| | |
|
|
| T |
25511645 |
gaggcatgggtaaatcaacacttgcaaaagcagtttttaattctattgctgatcaatttgaaagtgtatgttttcttcataatgtcagagagaattcaac |
25511744 |
T |
|
| Q |
220 |
tcaaaataacttgaaacatctccaagagaagct |
252 |
Q |
| |
|
|| || ||||||||||||||||| ||||||| |
|
|
| T |
25511745 |
tcttaagaacttgaaacatctccagaagaagct |
25511777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 256
Target Start/End: Complemental strand, 29843454 - 29843280
Alignment:
| Q |
82 |
tgatgatggggtccatatggttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaa |
181 |
Q |
| |
|
||||||| | ||||| ||||| || |||||||| ||||| || ||||||||| || ||||||| ||||||| |||||||| |||||||| |||||||| |
|
|
| T |
29843454 |
tgatgatcgagtccagatggtggggatttatggaattggtggattgggtaaaacaacacttgctcgagcaatttataatttgattgctgataaatttgaa |
29843355 |
T |
|
| Q |
182 |
ggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttctt |
256 |
Q |
| |
|
|||| ||||||||||| || | |||||| | ||||||| || || ||| | ||||||||||||||||||||| |
|
|
| T |
29843354 |
tgtttgtgttttcttcacgacgggagagaaagttcagctaaacatggcttagagcatctccaagagaagcttctt |
29843280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 237
Target Start/End: Original strand, 27215133 - 27215322
Alignment:
| Q |
48 |
tacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggcttgggtaaatcagcacttgcaag |
147 |
Q |
| |
|
||||| |||| |||| ||||||||| ||||| || | || | |||||| ||||| ||| || |||| ||||||| ||||||||||| ||||||||| |
|
|
| T |
27215133 |
tacaacaagtaaaattgcttcttgacaagggatctaaggaagaggtccacatggtaggacttcatggagctggaggcatgggtaaatcaacacttgcaaa |
27215232 |
T |
|
| Q |
148 |
agcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagctcaaaataacttgaaaca |
237 |
Q |
| |
|
|||||| | |||||| |||||||||| |||||||||| || |||||| | ||||||| |||||||||| || ||||||||||||||| |
|
|
| T |
27215233 |
agcaatttttaatttcattgctgatcagtttgaaggttcatattttctagaagatgtgaaagagaattcaactttaaataacttgaaaca |
27215322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 28140275 - 28140388
Alignment:
| Q |
107 |
atttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtga |
206 |
Q |
| |
|
||||||||||| ||||| | ||||||| || |||||||| |||||| ||||||||| |||| |||||||||||| |||| |||||||||||| |||||| |
|
|
| T |
28140275 |
atttatgggatgggagggtcgggtaaaacaacacttgcacaagcaatttataattttattgccgatcaatttgaatgtttgtgttttcttcataatgtga |
28140374 |
T |
|
| Q |
207 |
gagagaattcagct |
220 |
Q |
| |
|
|||| | ||||||| |
|
|
| T |
28140375 |
gagaaatttcagct |
28140388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 256
Target Start/End: Original strand, 29826711 - 29826875
Alignment:
| Q |
92 |
gtccatatggttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgtt |
191 |
Q |
| |
|
||||| ||||| || |||||||| ||||| || ||||||||| || ||||||| ||||||| |||||| | ||| |||| |||||||| | || |||| |
|
|
| T |
29826711 |
gtccagatggtggggatttatggaattggcggattgggtaaaacaacacttgctcgagcaatttataatatgattggtgataaatttgaatgcttgtgtt |
29826810 |
T |
|
| Q |
192 |
ttcttcatgatgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttctt |
256 |
Q |
| |
|
|||||||||| ||||||| | ||||||| || || ||| ||||||||||| ||||||||||| |
|
|
| T |
29826811 |
ttcttcatgacttgagagaaagttcagctaaacatggcttagaacatctccaacagaagcttctt |
29826875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 204
Target Start/End: Original strand, 26937759 - 26937866
Alignment:
| Q |
97 |
tatggttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttctt |
196 |
Q |
| |
|
|||||| || || ||||||||||| || | ||||||||| |||||||| ||||||| |||||||| ||| ||||||||||||| |||| ||||||||| |
|
|
| T |
26937759 |
tatggtagggatctatgggattggcggaattggtaaatcaacacttgcacgagcaatttataatttgattggtgatcaatttgaaagtttgtgttttctt |
26937858 |
T |
|
| Q |
197 |
catgatgt |
204 |
Q |
| |
|
||| |||| |
|
|
| T |
26937859 |
cataatgt |
26937866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 28227723 - 28227805
Alignment:
| Q |
138 |
cacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagct |
220 |
Q |
| |
|
|||||||||| ||| | ||||||||| | || ||||||||||| ||||| ||||||||||| ||||| || || ||||||||| |
|
|
| T |
28227723 |
cacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagct |
28227805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 28243566 - 28243645
Alignment:
| Q |
138 |
cacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattca |
217 |
Q |
| |
|
|||||||||||||| | ||||||| | |||||||||||||| |||||||||||||||| ||||| || || |||||| |
|
|
| T |
28243566 |
cacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgtaagggaaaattca |
28243645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 26724366 - 26724418
Alignment:
| Q |
165 |
ttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattca |
217 |
Q |
| |
|
||||||||||||||||||| || ||||| ||||| |||||||||| |||||| |
|
|
| T |
26724366 |
ttgctgatcaatttgaagggttgtgtttccttcacaatgtgagagaaaattca |
26724418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 28235336 - 28235396
Alignment:
| Q |
138 |
cacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttca |
198 |
Q |
| |
|
|||||||||||||| | ||||||| | |||||||||||||| ||||| ||||||||||| |
|
|
| T |
28235336 |
cacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttcttca |
28235396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 289
Target Start/End: Complemental strand, 29273383 - 29273098
Alignment:
| Q |
4 |
gcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggtt |
103 |
Q |
| |
|
||||||||||||||| || |||||||||||||| |||||| ||||||| |||| ||||||||||||||| | ||| ||||||||||| ||||||||||| |
|
|
| T |
29273383 |
gcccttacatgttgccaaataccctgttggattacagtctcaagtacaacaagtcaaatcgcttcttgataatggatctgatgatgggatccatatggtt |
29273284 |
T |
|
| Q |
104 |
ggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatg |
203 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
29273283 |
ggaatttatgggattggtggcttgggtaaatcaacccttgcaagagcaatctataatttttttgctgatcaatttgaagatttatgttttcttcatgatg |
29273184 |
T |
|
| Q |
204 |
tgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagttagat |
289 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| || ||| ||||||||||||||||| |||| ||||||||| |
|
|
| T |
29273183 |
tgagagagaattcagctaaaaataacttgaaacatctccaagagaaactccttttaaaaacaactggattggaaattaagttagat |
29273098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 16440694 - 16440734
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagt |
48 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16440694 |
ttacatgttgctaattaccctgttggattggagtctcgagt |
16440734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 3 - 288
Target Start/End: Complemental strand, 267886 - 267601
Alignment:
| Q |
3 |
agcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggt |
102 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||| |||||||||| | ||| |||||||||||||||||||||| |
|
|
| T |
267886 |
agcccttacatgttgccaattaccctgttggattatggtctcaagtacaacaagtgaaattgcttcttgataatggatctgatgatggggtccatatggt |
267787 |
T |
|
| Q |
103 |
tggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgat |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
267786 |
tggaatttatgggattggaggcttgggtaaatcaacccttgcaagagcaatctataattttattgctgatcaatttgaaggattatgttttcttcatgat |
267687 |
T |
|
| Q |
203 |
gtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagttaga |
288 |
Q |
| |
|
|||||||| ||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| |||||||| |
|
|
| T |
267686 |
gtgagagaaaattcagctataagtaacttgaaacatctccaagagaagctccttttaaaaacaactggattggaaattaagttaga |
267601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 7 - 287
Target Start/End: Complemental strand, 28127217 - 28126937
Alignment:
| Q |
7 |
cttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgga |
106 |
Q |
| |
|
|||||||||||| || || ||||||||||| || | ||||||| ||||||| | |||||| ||| ||||| |||||||| |||||| ||||| ||| |
|
|
| T |
28127217 |
cttacatgttgccaaatatcctgttggattacaggaccaagtacaacaagtgaatttgcttctcgataagggatatgatgatgaggtccacatggtagga |
28127118 |
T |
|
| Q |
107 |
atttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtga |
206 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||| |
|
|
| T |
28127117 |
ctttatggtattggaggcttgggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtga |
28127018 |
T |
|
| Q |
207 |
gagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaacaactggattgaaaatcaagttag |
287 |
Q |
| |
|
|||||| |||| ||| | |||| ||||||||||||||||| ||||| ||| | |||||| ||||||| | || ||||||| |
|
|
| T |
28127017 |
gagagatttcaactccatataatttgaaacatctccaagaaaagctccttttgaaaacagttggattggacattaagttag |
28126937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 28163916 - 28163681
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaa |
107 |
Q |
| |
|
||||||||||| || || ||||||||||| | |||| ||||||| ||||||||| |||||| ||| ||||| |||||||| |||||| ||||| ||| |
|
|
| T |
28163916 |
ttacatgttgcaaaatatcctgttggattacaatctcaagtacaacaagtgaaattgcttctcgataagggatatgatgatgaggtccacatggtaggac |
28163817 |
T |
|
| Q |
108 |
tttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgag |
207 |
Q |
| |
|
|||||| | ||||||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
28163816 |
tttatgatactggaggcttgggtaaatcaacacttgcaaaagcaatttataatttcattgctgatcaatttgaaggtttatgttttctagaagatgtgag |
28163717 |
T |
|
| Q |
208 |
agagaattcagctcaaaataacttgaaacatctcca |
243 |
Q |
| |
|
|||||||||| ||| | ||||||||||||||||| |
|
|
| T |
28163716 |
agagaattcaactccatccaacttgaaacatctcca |
28163681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 60208 - 60438
Alignment:
| Q |
6 |
ccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgg |
105 |
Q |
| |
|
||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
60208 |
ccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgg |
60307 |
T |
|
| Q |
106 |
aatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtg |
205 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || |
|
|
| T |
60308 |
aatttatgggattggaggctcaggtaaatcaacacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtc |
60407 |
T |
|
| Q |
206 |
agagagaattcagctcaaaataacttgaaac |
236 |
Q |
| |
|
||||||||||||||| ||||| |||||||| |
|
|
| T |
60408 |
agagagaattcagcttcaaatagcttgaaac |
60438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 171; Significance: 7e-92; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 18074400 - 18074630
Alignment:
| Q |
6 |
ccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgg |
105 |
Q |
| |
|
||||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18074400 |
ccttacatgttgccacttaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttgg |
18074499 |
T |
|
| Q |
106 |
aatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtg |
205 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || |
|
|
| T |
18074500 |
aatttatgggattggaggctcaggtaaatcaacacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttgaacaagtc |
18074599 |
T |
|
| Q |
206 |
agagagaattcagctcaaaataacttgaaac |
236 |
Q |
| |
|
||||||||||||||| ||||| |||||||| |
|
|
| T |
18074600 |
agagagaattcagcttcaaatagcttgaaac |
18074630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 265
Target Start/End: Complemental strand, 18679103 - 18678840
Alignment:
| Q |
2 |
cagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatgg |
101 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || || ||||||| |||| |||| |
|
|
| T |
18679103 |
cagcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaatgatcttatgatggagtccgcatgg |
18679004 |
T |
|
| Q |
102 |
ttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatga |
201 |
Q |
| |
|
| ||| ||||||| ||||||||| ||||||||| | ||||||||| |||||| ||||||||| ||||||||||||||||| | | |||||||||| | | |
|
|
| T |
18679003 |
taggactttatggcattggaggcatgggtaaattaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaa |
18678904 |
T |
|
| Q |
202 |
tgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
||||||||||||||||||| |||| | |||||||||||||| ||| | || ||| |||||||| |
|
|
| T |
18678903 |
tgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18678840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 18698944 - 18698680
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||||| | ||| |||||||||| |||| ||| |
|
|
| T |
18698944 |
tcagcccttacatgttgccaattaccctgttggattgcagtctcgagtacaacaagtgaaagcgcttcttgataaaggatctgatgatggagtccgcatg |
18698845 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
| ||| ||||||| ||||||||| ||||||||||| ||||||| | |||||| ||||||||| ||||||||||||||||| | | |||||||||| | |
|
|
| T |
18698844 |
ttaggactttatggcattggaggcatgggtaaatcaacacttgcgaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaa |
18698745 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||||||||||||||||||| |||| | |||||||||||||| ||| | || ||| |||||||| |
|
|
| T |
18698744 |
atgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18698680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 18723629 - 18723365
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||||||| | ||| || ||| ||| |||| ||| |
|
|
| T |
18723629 |
tcagcccttacatgttgccacttaccctgttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctaatggtggagtccgcatg |
18723530 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
| ||| ||||||| ||||||||| |||| |||||| ||||||||| || ||| ||||||||| ||||||||||||||||| | | |||||||||| | |
|
|
| T |
18723529 |
ataggactttatggtattggaggcatgggaaaatcaacacttgcaaaaggaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaa |
18723430 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
| |||||||||||||||||| |||| | |||||||||||||| ||| | || ||| |||||||| |
|
|
| T |
18723429 |
acgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18723365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 18731048 - 18730784
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||||||||||| | ||| || ||| ||| |||| ||| |
|
|
| T |
18731048 |
tcagcccttacatgttgccatttaccctgttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatcttatggtggagtccgcatg |
18730949 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
| ||| ||||||| ||||||||| |||| |||||| ||||||| | || ||| ||||||||| ||||||||||||||||| | | |||||||||| | |
|
|
| T |
18730948 |
ataggactttatggtattggaggcatgggaaaatcaacacttgctaaagtaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaa |
18730849 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||||||||||||||||||| |||| | |||||||||||||| ||| | || ||| |||||||| |
|
|
| T |
18730848 |
atgtgagagagaattcagcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18730784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 18655021 - 18654757
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||| ||| | |||||||||||| ||| |||||||||||||| |||||||||||||||||||| | ||| |||||| ||| |||| ||| |
|
|
| T |
18655021 |
tcagcccttacatgctgccagttaccctgttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctgatggtggagtccgcatg |
18654922 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
| ||| ||||||| ||||||||| |||| |||||| ||||||||| | |||| |||||| | ||||||||||||||||| | | |||||||||| | |
|
|
| T |
18654921 |
ataggactttatggtattggaggcatgggaaaatcaacacttgcaaaatcaattaataattgtattgctgatcaatttgaatgctcatgttttcttgaaa |
18654822 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||||||||| |||||| || |||| | |||||||||||||| ||| | || ||| |||||||| |
|
|
| T |
18654821 |
atgtgagagaaaattcatcttcaaatcaattgaaacatctccaggaggaactccttttaaaaaca |
18654757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 8121 - 8385
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||| |||||||||| ||||| ||| |
|
|
| T |
8121 |
tcagcccttacatgttgccaattaccctgttggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatg |
8220 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||||||||| |||||| || |||||| ||||||||| || |||||||||||||| | | |||||||||| | |
|
|
| T |
8221 |
gtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaa |
8320 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||| ||| | || ||| |||||||| |
|
|
| T |
8321 |
atgtgagagagaattcagcttcaaataaattgaaacatctccaggaggaactccttttaaaaaca |
8385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 13223 - 12959
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||| |||||||||| ||||| ||| |
|
|
| T |
13223 |
tcagcccttacatgttgccaattaccctgttggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatg |
13124 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||||||||| |||||| || |||||| ||||||||| || |||||||||||||| | | |||||||||| | |
|
|
| T |
13123 |
gtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttatttctgatcaatttgaatgctcatgttttcttgaaa |
13024 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||| ||| | || ||| |||||||| |
|
|
| T |
13023 |
atgtgagagagaattcagcttcaaataaattgaaacatctccaggaggaactccttttaaaaaca |
12959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 4260 - 3996
Alignment:
| Q |
1 |
tcagcccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatg |
100 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||| ||||| |||| | ||| ||| |
|
|
| T |
4260 |
tcagcccttacatgttgccaattaccctgttggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatcatggagcccacatg |
4161 |
T |
|
| Q |
101 |
gttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatg |
200 |
Q |
| |
|
|| ||| ||||||| | ||||||||||||||||||| |||||| || |||||| ||||||||| |||||||| |||||||| | | |||||||||| | |
|
|
| T |
4160 |
gtaggactttatggtactggaggcttgggtaaatcaacacttggaaaagcaatttataattttattgctgatgaatttgaatgctcatgttttcttgaaa |
4061 |
T |
|
| Q |
201 |
atgtgagagagaattcagctcaaaataacttgaaacatctccaagagaagcttcttctaaaaaca |
265 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||| ||| |||| ||| |||||||| |
|
|
| T |
4060 |
atgtgagagagaattcagcttcaaataaattgaaacatctccaggaggagctccttttaaaaaca |
3996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 3083 - 2848
Alignment:
| Q |
5 |
cccttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttg |
104 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| || |||||||||| ||||| ||||| | |
|
|
| T |
3083 |
cccttacatgttgccaattaccctgttggaatgaagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtag |
2984 |
T |
|
| Q |
105 |
gaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgt |
204 |
Q |
| |
|
|| ||||||| | |||||| |||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||| | | |||||||||| | |||| |
|
|
| T |
2983 |
gactttatggtactggaggattgggtaaatcaacacttgcaaaagcaatttataattttattgctgatcaatttgaatgctcatgttttcttgaaaatgt |
2884 |
T |
|
| Q |
205 |
gagagagaattcagctcaaaataacttgaaacatct |
240 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||| |
|
|
| T |
2883 |
gagagagaattcagcttcaaataaattgaaacatct |
2848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 87 - 217
Target Start/End: Original strand, 16691587 - 16691717
Alignment:
| Q |
87 |
atggggtccatatggttggaatttatgggattggaggcttgggtaaatcagcacttgcaagagcaatctataattttgttgctgatcaatttgaaggttt |
186 |
Q |
| |
|
||||||| |||||||||| || |||| |||||||| | |||||| || ||||||| ||||||| |||||||| ||||||||||||||||| |||| |
|
|
| T |
16691587 |
atggggtatatatggttgggatccatggaattggaggaatcggtaaaacaacacttgctcgagcaatttataatttgattgctgatcaatttgaatgttt |
16691686 |
T |
|
| Q |
187 |
atgttttcttcatgatgtgagagagaattca |
217 |
Q |
| |
|
|||||||||||||| |||||||| |||||| |
|
|
| T |
16691687 |
gtgttttcttcatgacgtgagagaaaattca |
16691717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 17790749 - 17790810
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttct |
69 |
Q |
| |
|
|||||||||||||| ||||||||||| || |||||||||| || ||||||| |||||||| |
|
|
| T |
17790749 |
ttacatgttgctaaataccctgttgggttagagtctcgagtggaaaaagtgaactcgcttct |
17790810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 17817634 - 17817695
Alignment:
| Q |
8 |
ttacatgttgctaattaccctgttggattgaagtctcgagtacaagaagtgaaatcgcttct |
69 |
Q |
| |
|
|||||||||||||| |||| |||||| || |||||||||| ||| ||||||| |||||||| |
|
|
| T |
17817634 |
ttacatgttgctaaataccatgttgggttagagtctcgagtgcaaaaagtgaactcgcttct |
17817695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 3280432 - 3280511
Alignment:
| Q |
140 |
cttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagc |
219 |
Q |
| |
|
|||||||||||| | |||||||| ||||| ||||||||||| || ||||||||||||| |||||||||| |||||||| |
|
|
| T |
3280432 |
cttgcaagagcagtttataatttcattgctaatcaatttgaatgtgtatgttttcttcacaatgtgagagaaaattcagc |
3280511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 28221 - 28303
Alignment:
| Q |
138 |
cacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattcagct |
220 |
Q |
| |
|
|||||||||| ||| | ||||||||| | || ||||||||||| ||||| ||||||||||| ||||| || || ||||||||| |
|
|
| T |
28221 |
cacttgcaagggcagtttataattttatagccgatcaatttgatggtttgtgttttcttcacgatgtaagggaaaattcagct |
28303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 43728 - 43807
Alignment:
| Q |
138 |
cacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttcatgatgtgagagagaattca |
217 |
Q |
| |
|
|||||||||||||| | ||||||| | |||||||||||||| |||||||||||||||| ||||| || || |||||| |
|
|
| T |
43728 |
cacttgcaagagcagtttataattccatagctgatcaatttgattgtttatgttttcttcacgatgtaagggaaaattca |
43807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 35498 - 35558
Alignment:
| Q |
138 |
cacttgcaagagcaatctataattttgttgctgatcaatttgaaggtttatgttttcttca |
198 |
Q |
| |
|
|||||||||||||| | ||||||| | |||||||||||||| ||||| ||||||||||| |
|
|
| T |
35498 |
cacttgcaagagcagtttataattccatagctgatcaatttgatggtttgtgttttcttca |
35558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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