View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2562_low_51 (Length: 260)
Name: NF2562_low_51
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2562_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 22 - 247
Target Start/End: Original strand, 1354400 - 1354625
Alignment:
| Q |
22 |
ggatgagaaatagacaaggaatgaataaaatgagaaggaccaactactgccacgtgtgcgattgcgcatgtggagctgtacatcgcacaagatgaaagga |
121 |
Q |
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| T |
1354400 |
ggatgagaaatagacaaggaatgaataaaatgagaaggaccaactactgccacgtgtgcgattgcgcatgtggagctgtacatcgcacaagatgaaaggc |
1354499 |
T |
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| Q |
122 |
aaagcattgtccatctacatcgttatgtgcatcgtgcactaagtcatgtgcatcgcgtaggtctgttccttaatcattgtccatctactttggcatgcct |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1354500 |
aaagcattgtccatctacatcgttatgtgcatcgtgcactaagtcatgtgcatcgcgtaggtctgttccttaatcattgtccatctactttggcatgcct |
1354599 |
T |
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| Q |
222 |
cttgaactctatttttgacactattc |
247 |
Q |
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|||||||||||||||||||||||||| |
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| T |
1354600 |
cttgaactctatttttgacactattc |
1354625 |
T |
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