View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2562_low_71 (Length: 231)
Name: NF2562_low_71
Description: NF2562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2562_low_71 |
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Alignment Details
Target: chr2 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7858638 - 7858859
Alignment:
| Q |
1 |
tcatgagtattcttgcctcgtctttccaaattgcccaaaagtattcctagcaccgcctctcaaggacgatgttaattaagtgtttaatgtctctccagac |
100 |
Q |
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||||||||||| || |||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
7858638 |
tcatgagtatttttacctcgtttttccaaattgccctagagtattcctagcaccgcctcttcaggacgatgttaattaagtgtttaatgtctctccagac |
7858737 |
T |
|
| Q |
101 |
gacctcaccttctacattaaggtaacctagcatgcgtcgtcatttttaaggtgagatactctgccttctttattctcccaataaaataccatcatagcac |
200 |
Q |
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||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
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| T |
7858738 |
gacatcaccttctatattaaggtaacctagcatgcgtcgtcatttttaaggtgagatgctctgccttctttattctcccaataagataccatcatagcac |
7858837 |
T |
|
| Q |
201 |
ctgcatcctcatattcctatga |
222 |
Q |
| |
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|||||||||||| ||||||||| |
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| T |
7858838 |
ctgcatcctcatgttcctatga |
7858859 |
T |
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