View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2563_high_19 (Length: 260)
Name: NF2563_high_19
Description: NF2563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2563_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 9449034 - 9448810
Alignment:
| Q |
1 |
tcagtgtaattgtatttttgatatcggacacgacccaagtctaacaccggatcataccttatccgaggattatccatgcttcggagatcacgtgttgttg |
100 |
Q |
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| T |
9449034 |
tcagtataattgtatttttgatgtcggacacgatccaagtctgacaccggatcatatcttatccgaggattatccatgcttcggagatcacgtgttgttg |
9448935 |
T |
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| Q |
101 |
ttgagaaaacttttcgtaaggatttagaatatatgaaacaactttttgtgtcttatcttatcaaaaacgtgtactctaaaaatggtgaagcacatgaact |
200 |
Q |
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| T |
9448934 |
ttgagaaaacttttcgtaaggatctagaatatatgaaacaactctttgtgtcttatcttatcaaacacgtgtactctaaaaatggtgaagcacatgaact |
9448835 |
T |
|
| Q |
201 |
gaccgtaacgagactgcctattcat |
225 |
Q |
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|||||||||||||||||||||||| |
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| T |
9448834 |
aaccgtaacgagactgcctattcat |
9448810 |
T |
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