View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2563_low_20 (Length: 275)
Name: NF2563_low_20
Description: NF2563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2563_low_20 |
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Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 49708705 - 49708959
Alignment:
| Q |
1 |
agttggagccaatatgctgtcattattattaatcaatcataaatcagagatgttgcaaatgaacacaacaaacaacaaaaattatagtcctagatacaat |
100 |
Q |
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| T |
49708705 |
agttggagccaatatgctgtcattattattaatcaatcataaatcagagatgttgcaaatgaacacaacaaacaacaaaaattatagtcctagatacaat |
49708804 |
T |
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| Q |
101 |
atgaaaatgaacaagaataaattacctaacgccggaacagattgcgcagacccaatcttgtttatagcatttaactcttcctttgacatcttgaatgatt |
200 |
Q |
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| T |
49708805 |
atgaaaatgaacaagaataaattacctaacgccggaacagattgcgcagacccaatcttgtttatagcatttaactcttcctttgacatcttgaatgatt |
49708904 |
T |
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| Q |
201 |
ccctcaaatggtgctcccatgttaatttcctctcacagctgaaggaggaaattgt |
255 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
49708905 |
ccctcaaatggtgcgcccatgttaatttcctctcacagctgaaggaggaaattgt |
49708959 |
T |
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