View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2563_low_29 (Length: 237)
Name: NF2563_low_29
Description: NF2563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2563_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 12 - 210
Target Start/End: Complemental strand, 37863459 - 37863261
Alignment:
| Q |
12 |
gaagaatatggtggcaaattaatgctaggtactactcctcttttggtacatgccattggtttcaattcaatattcttgtgtcatttaaatgttcactann |
111 |
Q |
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| T |
37863459 |
gaagaaaatggtggcaaattaatgctaggtactactcctcttttggtacatgccattggtttcaattcaatattcttgtgtcatttaaatgttcactatt |
37863360 |
T |
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| Q |
112 |
nnnnnnnnnnncaattcaggttcgcatgaaaaacattggattactagaaaataatcattatgattatctcgaaaataaattactagagttgttgttgtt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37863359 |
ttttgttttttcaattcaggttcgcatgaaaaacattggattactagaaaataatcattatgattatctcgaaaataaattactagagttgttgttgtt |
37863261 |
T |
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