View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2564_high_9 (Length: 250)
Name: NF2564_high_9
Description: NF2564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2564_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 32145781 - 32145541
Alignment:
| Q |
1 |
tcttattccaacgtccaaggtttcatggattccgttaaaacctctaccattcaattcccactgc-ccactctgatttcatcagctgacctagttatagac |
99 |
Q |
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| T |
32145781 |
tcttattccaacgtccaaggtttcatggattccgttaaaacctctaccattcaattcccgttgcgccactctgatttcatcagctgacctagttatagac |
32145682 |
T |
|
| Q |
100 |
atcaattcgttgagatgagtgagattgcatactccttctatcacatggtcatcattctctgaggttcattgtgaatcctcatgctacgatccaatgaaat |
199 |
Q |
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|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
32145681 |
atcaattcgttgagatgagtgagactccatactccttctatcacatggtcatcattctctgaggttcattgtgaatcctcgtgctacgatccaatgaaac |
32145582 |
T |
|
| Q |
200 |
aaccttacactcttttccgcttcctaaaagcgctacctttg |
240 |
Q |
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|||||||||||| |||||||||||||||||||||||||||| |
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| T |
32145581 |
aaccttacactcctttccgcttcctaaaagcgctacctttg |
32145541 |
T |
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