View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2564_low_13 (Length: 233)
Name: NF2564_low_13
Description: NF2564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2564_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 52926014 - 52926232
Alignment:
| Q |
1 |
cccataaactccaaaagttcattgttagcttctccacgagcagcaggagcagctacagtgacacgaacatcatcagcattgactctggtgattgcggagc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
52926014 |
cccataaactccaaaagttcattgttagcttctccacgagcagcaggagcagctacagtgacacgaacatcatcagcatttactctggtgattgcggagc |
52926113 |
T |
|
| Q |
101 |
ggtgagcacgatcctcaacttcaatagcaagttgaacaagaccaccttcaagagtggaaatgcagggtggaacgggagcatcctgtgggttggtttcagc |
200 |
Q |
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|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52926114 |
ggtgagcacgatcttcaacttcaatagcaagttgaacaagaccaccttcaagagtggaaatgcagggtggaacgggagcatcctgtgggttggtttcagc |
52926213 |
T |
|
| Q |
201 |
agcaacagtactgagtgct |
219 |
Q |
| |
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||||||||||||||||||| |
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| T |
52926214 |
agcaacagtactgagtgct |
52926232 |
T |
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