View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2566_high_29 (Length: 240)
Name: NF2566_high_29
Description: NF2566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2566_high_29 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 48399182 - 48398952
Alignment:
| Q |
1 |
tattatgggtcattgggtcccacgtctttttggctagtgccacggtctttctcattcgatgtatgctatgccatgtacg--------agtagtttagagt |
92 |
Q |
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| T |
48399182 |
tattatgggtcattgggtcccacgtctttttggctagtgccacggtctttctcattcgatgtatgctatgccatgtatgtacgagtgagtagtgtagagt |
48399083 |
T |
|
| Q |
93 |
ttttaaaatatttcaaaggaaaatgttaatatactaaaatcaaaattaataacatatgtcgaaagacatgtgttagcgttacattatttcaaatacacat |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48399082 |
ttttaaaatatttcaaaggaaaatgttaatatactaaaatcaaaattaataacatatgtcgaaagacatgtgttagcgttacattatttcaaatacacat |
48398983 |
T |
|
| Q |
193 |
actaattaataagaaaattatataacaagat |
223 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
48398982 |
actaattaataagaaaattatataacaagat |
48398952 |
T |
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