View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2566_low_12 (Length: 457)
Name: NF2566_low_12
Description: NF2566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2566_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 423; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 18 - 448
Target Start/End: Original strand, 45308679 - 45309109
Alignment:
| Q |
18 |
ctattatcgtacccgcgcaaaactatataagaaaggaaacttatccttgttgtaattatctatctatttttctcttgaactgatttcattatataatcat |
117 |
Q |
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| T |
45308679 |
ctattatcgtacccgcgcaaaactatataagaaaggaaacttatccttgttgtaattatctatctatttttctcttgaactgatttcattatataatcat |
45308778 |
T |
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| Q |
118 |
cacagatagaaataaaagattgtaacatactaagatatatataatgaaaactaaaacattgctagtctcgtcctttttcctcatcttgattattaatatt |
217 |
Q |
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| T |
45308779 |
cacagatagaaataatagtttgtaacatactaagatatatataatgaaaactaaaacattgctagtctcgtcctttttcctcatcttgattattaatatt |
45308878 |
T |
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| Q |
218 |
acttttggtattgtccacagtgataatttcaatgagtttagaatccctaataaggttgtcaagtccttatgcaaagacactgatgaccataaactttgcc |
317 |
Q |
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| T |
45308879 |
acttttggtattgtccacagtgataatttcaatgagtttagaatccctaataaggttgtcaagtccttatgcaaagacactgatgaccataaactttgcc |
45308978 |
T |
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| Q |
318 |
atgatgtcctctaccccgtgaaaacctcaaacccaatagattatattgatgttgtggtgaagaacttgatggaaagcgtagaaaacgcatttaatgacat |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45308979 |
atgatgtcctctaccccgtgaaaacctcaaacccaatagattatattgatgttgtggtgaagaacttgatggaaagcgtagaaaacgcatttaatgacat |
45309078 |
T |
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| Q |
418 |
gagtaataaacttagttctatggagaataat |
448 |
Q |
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| T |
45309079 |
gagtaataaacttagttctatggagaataat |
45309109 |
T |
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