View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2566_low_18 (Length: 401)
Name: NF2566_low_18
Description: NF2566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2566_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 59 - 384
Target Start/End: Original strand, 36440336 - 36440661
Alignment:
| Q |
59 |
ggaacctctttcatggtgttatgaatagcatttgatgagtgaaaaggattagaaatgaacaagttgaatttgagttacttttatcattaatgatgagaat |
158 |
Q |
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| T |
36440336 |
ggaacctctttcatggtgttatgaatagcatttgatgagtgaaaaggattagaaatgaacaagttgaatttgagttacttttatcattaatgatgagaat |
36440435 |
T |
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| Q |
159 |
gcgtgctgatctggggatgaatatgcatgagttgttatatatgggtcctgtgagtaaaggagtgtgattgagacatacaactaaaaattgaaaaattggt |
258 |
Q |
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| T |
36440436 |
gcgtgctgatctggggatgaatatgcatgagttgttatatatgggtcctgtgagtaaaggagtgcgattgagacatacaactaaaaattgaaaaattggt |
36440535 |
T |
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| Q |
259 |
accttggtagttgcatgatattaaattcttagggaacttatgtggctctagatagaggcacatagttagtaaatctgtttgttagaaatctgacttgatt |
358 |
Q |
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| T |
36440536 |
accttggtagttgcatgatattaaattcttagggaacttatgtggctctagatagaggcacatagttagtaaatctgtttgttagaaatctgacttgatt |
36440635 |
T |
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| Q |
359 |
cttcatggacagttcatgtgtgttgt |
384 |
Q |
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| T |
36440636 |
cttcatggacagttcatgtgtgttgt |
36440661 |
T |
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