View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2566_low_24 (Length: 342)
Name: NF2566_low_24
Description: NF2566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2566_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 61 - 324
Target Start/End: Original strand, 47435702 - 47435965
Alignment:
| Q |
61 |
tgaagattcagattttaaccccatgagtttcggacttattccattggggaaaaccctaacgtattcagcttcatttagaatctcagtgtcattggtggaa |
160 |
Q |
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| T |
47435702 |
tgaagattcagattttaaccccatgagtttcggacttattccattggggaaaaccctaacgtattcagcttcatttagaatctcagtgtcattggtggaa |
47435801 |
T |
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| Q |
161 |
atccataaaggggatccagcaagagttaacattgtgagttcctccatagaaaccacagcaagttctacaatcgttgctttgtcaacttcattaggaattg |
260 |
Q |
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| T |
47435802 |
atccataaaggggatccagcaagagttaagattgtgagttcctccatagaaaccacagcaagttctacaatcgttgctttgtcaacttcattaggaattg |
47435901 |
T |
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| Q |
261 |
agagggaccctaaggggtcattaccaccataacacagttcttctatcatgcttgaagatatgtc |
324 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47435902 |
agagggaccctaaggggtcattaccaccataacacagttcttctatcatgcttgaagatatgtc |
47435965 |
T |
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