View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2566_low_28 (Length: 315)

Name: NF2566_low_28
Description: NF2566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2566_low_28
NF2566_low_28
[»] chr5 (39 HSPs)
chr5 (31-306)||(8445586-8445860)
chr5 (23-121)||(33906045-33906144)
chr5 (44-136)||(538066-538156)
chr5 (45-136)||(13695728-13695818)
chr5 (23-132)||(316807-316916)
chr5 (44-145)||(42309972-42310071)
chr5 (44-136)||(533810-533900)
chr5 (23-117)||(35616228-35616321)
chr5 (44-136)||(39468586-39468676)
chr5 (45-136)||(213506-213595)
chr5 (45-136)||(28278357-28278446)
chr5 (45-122)||(25412814-25412890)
chr5 (44-136)||(30682959-30683051)
chr5 (44-136)||(13488244-13488334)
chr5 (44-152)||(33831705-33831811)
chr5 (44-136)||(42428467-42428557)
chr5 (45-136)||(13239792-13239881)
chr5 (34-135)||(5058087-5058187)
chr5 (23-117)||(30793195-30793288)
chr5 (43-136)||(38747046-38747137)
chr5 (45-134)||(40147304-40147391)
chr5 (44-136)||(9049379-9049469)
chr5 (34-152)||(18441674-18441792)
chr5 (70-117)||(32609594-32609641)
chr5 (46-132)||(3325958-3326043)
chr5 (44-122)||(32636878-32636955)
chr5 (43-152)||(3075694-3075801)
chr5 (44-133)||(16452124-16452211)
chr5 (78-151)||(30802854-30802926)
chr5 (45-122)||(37439195-37439271)
chr5 (44-121)||(42426272-42426348)
chr5 (46-149)||(8565985-8566086)
chr5 (45-122)||(13343115-13343190)
chr5 (45-122)||(36074081-36074156)
chr5 (45-118)||(9789262-9789335)
chr5 (45-118)||(16409532-16409605)
chr5 (45-118)||(26177939-26178012)
chr5 (45-122)||(30182642-30182718)
chr5 (23-133)||(27637628-27637737)
[»] chr4 (59 HSPs)
chr4 (23-121)||(12119594-12119692)
chr4 (23-197)||(33089849-33090032)
chr4 (23-152)||(379405-379533)
chr4 (34-136)||(48142402-48142505)
chr4 (23-136)||(26699457-26699570)
chr4 (32-136)||(3913489-3913591)
chr4 (44-136)||(26175673-26175763)
chr4 (44-136)||(27417002-27417092)
chr4 (44-136)||(54199943-54200033)
chr4 (45-136)||(5370121-5370211)
chr4 (45-136)||(48143084-48143173)
chr4 (45-136)||(56178675-56178764)
chr4 (23-152)||(12073417-12073545)
chr4 (23-121)||(22882767-22882864)
chr4 (23-121)||(22934431-22934528)
chr4 (23-136)||(50262716-50262828)
chr4 (23-132)||(34112862-34112969)
chr4 (44-136)||(4588000-4588090)
chr4 (44-136)||(9927495-9927585)
chr4 (44-136)||(36994565-36994655)
chr4 (44-136)||(37740666-37740756)
chr4 (23-136)||(2209754-2209867)
chr4 (45-132)||(8665453-8665538)
chr4 (45-136)||(40632486-40632575)
chr4 (23-136)||(46703541-46703654)
chr4 (45-136)||(50673885-50673974)
chr4 (45-136)||(54883061-54883150)
chr4 (44-134)||(5429722-5429810)
chr4 (44-122)||(12743962-12744039)
chr4 (44-122)||(12745351-12745428)
chr4 (44-136)||(6542216-6542306)
chr4 (48-132)||(6677514-6677597)
chr4 (68-136)||(24969153-24969219)
chr4 (44-136)||(34570451-34570541)
chr4 (44-136)||(36463426-36463516)
chr4 (44-136)||(48893675-48893765)
chr4 (47-122)||(12744087-12744161)
chr4 (69-132)||(44570427-44570489)
chr4 (46-136)||(6655997-6656085)
chr4 (24-121)||(33989899-33989997)
chr4 (78-136)||(53345258-53345315)
chr4 (45-122)||(29999844-29999921)
chr4 (44-117)||(51337123-51337195)
chr4 (44-136)||(26364277-26364367)
chr4 (44-136)||(46147428-46147518)
chr4 (44-152)||(52467391-52467497)
chr4 (45-136)||(8648180-8648269)
chr4 (47-118)||(12745476-12745546)
chr4 (44-122)||(12739587-12739664)
chr4 (44-122)||(12747793-12747870)
chr4 (79-128)||(32091527-32091575)
chr4 (45-122)||(52095400-52095476)
chr4 (44-152)||(5871845-5871951)
chr4 (45-121)||(31474206-31474281)
chr4 (80-132)||(34788847-34788898)
chr4 (45-121)||(35662496-35662571)
chr4 (45-121)||(41639481-41639556)
chr4 (45-136)||(41964456-41964546)
chr4 (88-136)||(55085445-55085492)
[»] chr2 (39 HSPs)
chr2 (23-136)||(33648212-33648325)
chr2 (23-136)||(24398098-24398211)
chr2 (45-118)||(32289621-32289694)
chr2 (44-136)||(33162487-33162577)
chr2 (34-136)||(36318035-36318136)
chr2 (34-122)||(5723282-5723370)
chr2 (44-152)||(723781-723887)
chr2 (45-136)||(11049594-11049684)
chr2 (34-136)||(17490174-17490275)
chr2 (45-136)||(45726970-45727059)
chr2 (23-121)||(42019885-42019986)
chr2 (34-136)||(42288137-42288237)
chr2 (45-122)||(4484368-4484445)
chr2 (44-136)||(36773603-36773693)
chr2 (44-136)||(38312281-38312371)
chr2 (68-132)||(42261546-42261609)
chr2 (44-152)||(42362377-42362483)
chr2 (45-136)||(1631770-1631859)
chr2 (45-136)||(2334456-2334545)
chr2 (45-136)||(6595044-6595133)
chr2 (23-117)||(28671989-28672084)
chr2 (44-122)||(29867923-29868000)
chr2 (20-121)||(30218056-30218158)
chr2 (45-135)||(36988114-36988202)
chr2 (45-122)||(30833399-30833476)
chr2 (44-136)||(14633862-14633953)
chr2 (44-136)||(34139807-34139898)
chr2 (44-131)||(17057406-17057491)
chr2 (44-131)||(17085389-17085474)
chr2 (34-136)||(26353225-26353326)
chr2 (45-136)||(35446922-35447011)
chr2 (45-122)||(4503171-4503246)
chr2 (45-131)||(7815311-7815395)
chr2 (94-152)||(11690526-11690583)
chr2 (78-132)||(41446184-41446237)
chr2 (45-122)||(45099809-45099884)
chr2 (95-152)||(24885686-24885742)
chr2 (88-136)||(11067346-11067393)
chr2 (68-132)||(41454279-41454342)
[»] scaffold0466 (1 HSPs)
scaffold0466 (34-136)||(7368-7469)
[»] chr6 (24 HSPs)
chr6 (23-152)||(5043652-5043780)
chr6 (45-152)||(2972977-2973082)
chr6 (44-136)||(28137445-28137535)
chr6 (45-136)||(21588972-21589061)
chr6 (45-136)||(21593705-21593794)
chr6 (45-122)||(5406238-5406314)
chr6 (45-122)||(5410563-5410639)
chr6 (45-122)||(5413432-5413508)
chr6 (36-136)||(17758064-17758163)
chr6 (45-122)||(31404713-31404789)
chr6 (45-136)||(3808746-3808836)
chr6 (46-134)||(25073611-25073698)
chr6 (45-136)||(26830161-26830250)
chr6 (44-136)||(603125-603215)
chr6 (45-121)||(9183069-9183144)
chr6 (44-136)||(26954323-26954413)
chr6 (23-136)||(22424841-22424954)
chr6 (45-122)||(30834574-30834650)
chr6 (45-122)||(33160390-33160466)
chr6 (51-133)||(4045467-4045548)
chr6 (78-132)||(5740068-5740121)
chr6 (45-122)||(2171570-2171645)
chr6 (23-134)||(26800630-26800740)
chr6 (88-136)||(3038983-3039030)
[»] chr1 (56 HSPs)
chr1 (34-136)||(3460737-3460838)
chr1 (23-136)||(47255355-47255467)
chr1 (44-136)||(37559905-37559996)
chr1 (34-136)||(31925733-31925834)
chr1 (43-136)||(31659279-31659370)
chr1 (25-132)||(6808497-6808604)
chr1 (44-152)||(50167212-50167318)
chr1 (45-136)||(11348739-11348828)
chr1 (45-136)||(22079357-22079447)
chr1 (20-121)||(5459961-5460062)
chr1 (43-136)||(19754536-19754627)
chr1 (44-136)||(3156906-3156996)
chr1 (45-136)||(7482268-7482358)
chr1 (44-136)||(28220263-28220353)
chr1 (44-136)||(28265591-28265681)
chr1 (44-152)||(41360939-41361045)
chr1 (44-136)||(49918391-49918481)
chr1 (34-136)||(4552663-4552764)
chr1 (45-136)||(13547127-13547216)
chr1 (45-136)||(29136288-29136377)
chr1 (25-134)||(2262991-2263100)
chr1 (23-136)||(42297990-42298102)
chr1 (68-153)||(15820331-15820414)
chr1 (45-122)||(20762726-20762802)
chr1 (44-121)||(28223458-28223534)
chr1 (46-134)||(16455664-16455750)
chr1 (45-136)||(37168338-37168428)
chr1 (45-152)||(8550825-8550930)
chr1 (45-136)||(13549038-13549127)
chr1 (23-136)||(47115212-47115325)
chr1 (47-117)||(9109459-9109529)
chr1 (83-136)||(928051-928103)
chr1 (45-122)||(13316390-13316466)
chr1 (45-146)||(37282729-37282829)
chr1 (44-153)||(46064942-46065049)
chr1 (44-136)||(834204-834294)
chr1 (32-136)||(10925264-10925370)
chr1 (44-136)||(13659373-13659463)
chr1 (44-136)||(44455201-44455291)
chr1 (34-136)||(13138002-13138103)
chr1 (44-153)||(37503594-37503698)
chr1 (46-136)||(3189371-3189459)
chr1 (46-136)||(3198188-3198276)
chr1 (46-136)||(3207027-3207115)
chr1 (70-132)||(12318585-12318646)
chr1 (68-114)||(16914235-16914281)
chr1 (46-132)||(19752731-19752815)
chr1 (34-136)||(23555292-23555392)
chr1 (45-122)||(51765449-51765527)
chr1 (80-117)||(1485843-1485880)
chr1 (68-121)||(25652141-25652194)
chr1 (47-131)||(193657-193739)
chr1 (45-121)||(1833577-1833652)
chr1 (68-116)||(4535541-4535589)
chr1 (44-136)||(45644391-45644481)
chr1 (44-136)||(50169247-50169337)
[»] chr8 (40 HSPs)
chr8 (45-136)||(18655441-18655530)
chr8 (45-136)||(42498235-42498324)
chr8 (44-136)||(30143381-30143471)
chr8 (34-136)||(4283565-4283666)
chr8 (25-137)||(11712017-11712129)
chr8 (44-121)||(32902210-32902287)
chr8 (34-122)||(34254357-34254445)
chr8 (34-122)||(34256533-34256621)
chr8 (44-136)||(1822333-1822424)
chr8 (44-136)||(1856778-1856869)
chr8 (44-136)||(5689312-5689402)
chr8 (44-152)||(19491736-19491842)
chr8 (44-136)||(40221786-40221876)
chr8 (45-136)||(42435029-42435118)
chr8 (34-136)||(1292490-1292590)
chr8 (45-122)||(31218311-31218387)
chr8 (44-153)||(33352174-33352281)
chr8 (44-136)||(4731699-4731789)
chr8 (44-132)||(7597659-7597746)
chr8 (44-136)||(12702671-12702761)
chr8 (44-136)||(15212827-15212917)
chr8 (44-136)||(18141861-18141951)
chr8 (44-136)||(27811319-27811409)
chr8 (45-152)||(40328804-40328910)
chr8 (44-136)||(44353834-44353924)
chr8 (45-122)||(1746257-1746332)
chr8 (68-118)||(41267027-41267077)
chr8 (44-121)||(6599027-6599103)
chr8 (44-121)||(6674480-6674556)
chr8 (45-122)||(44303909-44303985)
chr8 (68-136)||(10240195-10240262)
chr8 (44-136)||(10930236-10930326)
chr8 (44-136)||(40321121-40321211)
chr8 (45-136)||(43036464-43036553)
chr8 (68-122)||(9765799-9765852)
chr8 (45-122)||(17982707-17982783)
chr8 (43-136)||(30291648-30291739)
chr8 (67-151)||(40585739-40585823)
chr8 (44-136)||(3303707-3303797)
chr8 (34-121)||(8153813-8153900)
[»] chr7 (46 HSPs)
chr7 (34-136)||(23565087-23565188)
chr7 (23-136)||(22328405-22328518)
chr7 (34-136)||(36574542-36574643)
chr7 (44-136)||(496020-496110)
chr7 (44-136)||(1113698-1113788)
chr7 (44-136)||(4253565-4253656)
chr7 (23-117)||(3904632-3904726)
chr7 (23-136)||(8359331-8359444)
chr7 (45-136)||(22270014-22270103)
chr7 (45-136)||(32358092-32358181)
chr7 (44-136)||(47673980-47674070)
chr7 (44-136)||(48491620-48491710)
chr7 (47-134)||(6359992-6360077)
chr7 (45-136)||(6432012-6432101)
chr7 (45-136)||(19502219-19502308)
chr7 (45-152)||(29991078-29991183)
chr7 (44-122)||(14069870-14069947)
chr7 (44-122)||(14379898-14379975)
chr7 (46-136)||(43864285-43864373)
chr7 (45-122)||(35853968-35854044)
chr7 (44-145)||(36146445-36146543)
chr7 (44-152)||(41649048-41649153)
chr7 (44-136)||(2361009-2361099)
chr7 (44-136)||(26417357-26417447)
chr7 (44-136)||(27347858-27347948)
chr7 (44-136)||(30024769-30024859)
chr7 (44-136)||(31733006-31733096)
chr7 (45-136)||(23555081-23555170)
chr7 (34-136)||(23344016-23344115)
chr7 (47-136)||(4508746-4508833)
chr7 (68-121)||(4510609-4510661)
chr7 (68-121)||(4512451-4512503)
chr7 (88-136)||(2390323-2390370)
chr7 (68-123)||(4178827-4178880)
chr7 (44-136)||(4586202-4586292)
chr7 (45-121)||(25615908-25615983)
chr7 (68-136)||(29608778-29608844)
chr7 (44-136)||(31105430-31105520)
chr7 (44-136)||(41317471-41317561)
chr7 (45-136)||(48599372-48599461)
chr7 (44-122)||(8153396-8153473)
chr7 (45-122)||(25766998-25767075)
chr7 (68-121)||(18126699-18126751)
chr7 (45-118)||(39731426-39731499)
chr7 (44-121)||(47676173-47676249)
chr7 (45-121)||(34310754-34310829)
[»] chr3 (48 HSPs)
chr3 (23-152)||(46860499-46860627)
chr3 (34-122)||(45095217-45095305)
chr3 (23-132)||(33191877-33191983)
chr3 (45-122)||(19683927-19684003)
chr3 (44-136)||(29810909-29810999)
chr3 (44-136)||(30236166-30236256)
chr3 (44-136)||(44331586-44331676)
chr3 (44-136)||(46173398-46173488)
chr3 (45-136)||(7762306-7762395)
chr3 (45-152)||(22835040-22835145)
chr3 (45-136)||(34491253-34491342)
chr3 (45-136)||(54593745-54593834)
chr3 (79-136)||(5433947-5434003)
chr3 (45-122)||(23197977-23198053)
chr3 (45-122)||(23200176-23200252)
chr3 (45-122)||(37408512-37408588)
chr3 (44-136)||(760888-760978)
chr3 (44-136)||(29196423-29196513)
chr3 (44-152)||(39153398-39153504)
chr3 (44-136)||(40735424-40735514)
chr3 (45-136)||(49199507-49199597)
chr3 (44-152)||(53921540-53921646)
chr3 (70-121)||(2020194-2020245)
chr3 (45-136)||(7764505-7764594)
chr3 (45-152)||(9581307-9581412)
chr3 (68-198)||(35138766-35138904)
chr3 (34-136)||(5236483-5236583)
chr3 (70-132)||(20937701-20937762)
chr3 (47-136)||(4569993-4570080)
chr3 (68-121)||(41510317-41510370)
chr3 (45-117)||(6095637-6095708)
chr3 (44-136)||(16499070-16499160)
chr3 (44-136)||(29682400-29682490)
chr3 (44-136)||(29813104-29813194)
chr3 (44-136)||(32891145-32891235)
chr3 (44-136)||(40734539-40734629)
chr3 (44-136)||(44700515-44700605)
chr3 (47-122)||(5258184-5258258)
chr3 (47-122)||(5260363-5260437)
chr3 (70-132)||(1313867-1313928)
chr3 (45-118)||(9636164-9636236)
chr3 (68-121)||(26323134-26323187)
chr3 (73-133)||(5373277-5373336)
chr3 (68-152)||(25491028-25491111)
chr3 (88-136)||(28253347-28253394)
chr3 (44-136)||(31314486-31314576)
chr3 (23-121)||(41819538-41819636)
chr3 (44-136)||(47304292-47304382)
[»] scaffold0219 (1 HSPs)
scaffold0219 (23-132)||(27457-27566)
[»] scaffold0016 (1 HSPs)
scaffold0016 (45-122)||(114656-114732)
[»] scaffold0002 (2 HSPs)
scaffold0002 (45-122)||(434587-434663)
scaffold0002 (68-132)||(490381-490444)
[»] scaffold0176 (1 HSPs)
scaffold0176 (45-136)||(18042-18130)
[»] scaffold0066 (1 HSPs)
scaffold0066 (44-152)||(20452-20558)
[»] scaffold0053 (1 HSPs)
scaffold0053 (54-117)||(25112-25175)
[»] scaffold0006 (1 HSPs)
scaffold0006 (44-136)||(149134-149224)
[»] scaffold1519 (1 HSPs)
scaffold1519 (88-122)||(970-1004)
[»] scaffold0491 (2 HSPs)
scaffold0491 (45-118)||(8773-8846)
scaffold0491 (45-118)||(11199-11272)
[»] scaffold0286 (1 HSPs)
scaffold0286 (45-122)||(11611-11687)


Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 31 - 306
Target Start/End: Complemental strand, 8445860 - 8445586
Alignment:
Q  31 attacctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagc 130  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  8445860 attacctactttagggagagattcatctttctaatctactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt-caacaaac 8445762  T
Q  131 tcacaagtatcaaacctaattttctcaacctcttcccataaacaagactctcaatgattttcactctctcaaagtgaaacgttagaaagagatgaaaatc 230  Q
    | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  8445761 ttacaagtatcaaacttaattttctcaacctcttcccatgaacaagactctcaatgattttcactctctcaaggtgaaaccttagaaagagatgaaaatc 8445662  T
Q  231 aatgtattgcccaattgtatatcatatccatcatttcaatttcaaatgtattttagggctctccatacagaataat 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8445661 aatgtattgcccaattgtatatcatatccatcatttcaatttcaaatgtattttagggctctccatacagaataat 8445586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 33906045 - 33906144
Alignment:
Q  23 gtccaacaattacctactctaggga-gagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||| | |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||| ||||| |||||||||| ||||||||| |||||||    
T  33906045 gtccaacattgacctactctagggaagagattgatctttccaatctactatcaatgagttctttacaaagagatacaaaaggattacaagaagttagctt 33906144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 538156 - 538066
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || ||| |||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  538156 gggagagattgatctctccaatctactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 538066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 13695728 - 13695818
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||| | |||| ||||||  ||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  13695728 ggagagaataatctctctaatccactattaatgagttctttacaaagagatacaaaagggttacaagaaattagcttt-aacaagctcacaa 13695818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 316916 - 316807
Alignment:
Q  23 gtccaacaattacctactctaggg-agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||||||| |||||||||||  ||  ||  | ||||||| ||||||||| ||||| |||||||||| ||||||||||||||| |    
T  316916 gtccaacaatgacctactctaggggagagattgatccctccgatccattatcaatgagttctttacaaagagatacaaaaggattacaagaaattagc-t 316818  T
Q  122 tcaacaagctc 132  Q
    |||||||||||    
T  316817 tcaacaagctc 316807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 42309972 - 42310071
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    |||||||||||||||  |||||  ||||||||| ||||||| | ||||| ||||||||| |||||||||||||||| ||||||||||||||||  |||||    
T  42309972 gggagagattgatctcgctaatccactatcaataagttctt-acaaagagatacaaaagagttacaagaaattagc-ttcaacaagctcacaaagatcaa 42310069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 533900 - 533810
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||||||| |||  ||||||||| ||||| ||| ||||| ||||||| ||||||||| |||||||| ||||||||||||||||    
T  533900 gggagagattgatctttccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaaaaaattagc-ttcaacaagctcacaa 533810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 35616321 - 35616228
Alignment:
Q  23 gtccaacaattacctactctagg-gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    |||||||||| |||||||||||| ||||||  |||| || |  || ||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  35616321 gtccaacaatgacctactctaggtgagaga--gatcattatgtttcactatcaatgagttctttacaaagaaatacaaaagggttacaagaaatta 35616228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 39468586 - 39468676
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| ||||||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  39468586 gggagagattgatctctctaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 39468676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 213595 - 213506
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  213595 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttt-aacaagctcacaa 213506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 28278446 - 28278357
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| |||| |||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  28278446 ggagagattgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 28278357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 25412890 - 25412814
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  25412890 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 25412814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 30682959 - 30683051
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttct-ttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| |||  | ||| |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  30682959 gggagagattgatctctccaatccactatcaatgagtattcttacaaagaaatacaaaagggttacaagaaattagc-ttcaacaagttcacaa 30683051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 13488334 - 13488244
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  13488334 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 13488244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 33831811 - 33831705
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| |  |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| || |||||||||||||  | |||    
T  33831811 gggagagattgatctcttcaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttaaacaagctcacaaagaacaa 33831714  T
Q  144 acctaattt 152  Q
    |||||||||    
T  33831713 acctaattt 33831705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 42428467 - 42428557
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  42428467 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 42428557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 13239881 - 13239792
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||||| |||||||||||||||| ||||||||| ||||||    
T  13239881 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagc-ttcaacaagttcacaa 13239792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 5058187 - 5058087
Alignment:
Q  34 acctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||| |||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| ||| ||||||||| |||| ||||||||||||    
T  5058187 acctactctagaggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggatacaagaaaatagc-ttcaacaagctc 5058090  T
Q  133 aca 135  Q
    |||    
T  5058089 aca 5058087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 30793288 - 30793195
Alignment:
Q  23 gtccaacaattacctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    |||||||||| || |||||||||| ||||  ||||| || | || ||||||||||||||||||| ||||| |||||||| |||||||| ||||||    
T  30793288 gtccaacaatgacttactctaggg-gagagagatctctccacttcactatcaattagttctttacaaagagatacaaaatggttacaataaatta 30793195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 38747137 - 38747046
Alignment:
Q  43 agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||||| || |||   |||||||| |||| |||  ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  38747137 agggagagattgatctctccaatcctctatcaatgagtt-tttccaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 38747046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 40147391 - 40147304
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcac 134  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||    
T  40147391 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcac 40147304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 9049379 - 9049469
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||| |||||||| || |||  ||| ||||| ||||||| | ||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  9049379 gggagatattgatctctccaatccactgtcaatgagttctt-acaaagagatacaaaatggttacaagaaattagc-ttcaacaagctcacaa 9049469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 152
Target Start/End: Original strand, 18441674 - 18441792
Alignment:
Q  34 acctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||| ||||||||||| || || |||  ||||||||| |||||||   ||||| ||||||||| ||||||||||||||| |||  ||||| ||    
T  18441674 acctactctagaggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagattt-gacaagttc 18441772  T
Q  133 acaagtatcaaacctaattt 152  Q
    ||||| | ||| ||||||||    
T  18441773 acaaggaacaaccctaattt 18441792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 32609641 - 32609594
Alignment:
Q  70 tatcaattagttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  32609641 tatcaataagttctttacaaagaaatacaaaagagttacaagaaatta 32609594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 3326043 - 3325958
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    |||| |||||||| ||||||  || |||| | ||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||    
T  3326043 gagatattgatctctctaatccaccatcattgagttctttacaaagagatacacaatggttacaagaaattagc-ttcaacaagctc 3325958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 32636955 - 32636878
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  32636955 gggagagattgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttt 32636878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 3075694 - 3075801
Alignment:
Q  43 agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatca 142  Q
    |||||||||||||||| || |||| ||||||||  | ||| ||| ||| | ||||||| |||||||||||||||||  |||| |||||||||||  | ||    
T  3075694 agggagagattgatctctccaattcactatcaacgaattc-ttacaaaaagatacaaatgggttacaagaaattag-attcagcaagctcacaaagaaca 3075791  T
Q  143 aacctaattt 152  Q
    ||||||||||    
T  3075792 aacctaattt 3075801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 16452211 - 16452124
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    |||||||||| |||| || |||  ||||| ||| ||||||| | ||||| ||||||| |||||||||||||||||| |||||||||||||    
T  16452211 gggagagatttatctctccaatccactatgaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctca 16452124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 30802926 - 30802854
Alignment:
Q  78 agttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaacctaatt 151  Q
    ||||||||| ||| | |||||||||| |||||| ||||||| |||||||||||||||||  | |||||||||||    
T  30802926 agttctttacaaatagatacaaaaggattacaataaattag-tttcaacaagctcacaaagaacaaacctaatt 30802854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 37439271 - 37439195
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||||| |||||||||||||| ||||    
T  37439271 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattaacttt 37439195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 42426272 - 42426348
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| ||||| ||||||||||||||    
T  42426272 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttgcaagaaattagctt 42426348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 8565985 - 8566086
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaac 145  Q
    ||||||||||||| || |||  ||||||||| ||||||| | | ||  ||||||| |||||||||||||||||| || |||||||||||||  | |||||    
T  8565985 gagagattgatctctccaatccactatcaatgagttctt-acagagggatacaaatgggttacaagaaattagc-ttaaacaagctcacaaagaacaaac 8566082  T
Q  146 ctaa 149  Q
    ||||    
T  8566083 ctaa 8566086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 13343190 - 13343115
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| |  |||| |||||||||| ||||||||||||||||||    
T  13343190 ggagagattgaactctccaatccactatcaatgagttcttca--aagagatacaaaaggattacaagaaattagcttt 13343115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 36074081 - 36074156
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| |  |||| ||||||||| |||||||||||||||||||    
T  36074081 ggagagattgaactctccaatccactatcaatgagttcttca--aagagatacaaaagagttacaagaaattagcttt 36074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 9789262 - 9789335
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| ||||||||| |||||||||||||||    
T  9789262 ggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattag 9789335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 16409605 - 16409532
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| ||||||||| |||||||||||||||    
T  16409605 ggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattag 16409532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 26178012 - 26177939
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| ||||||||| |||||||||||||||    
T  26178012 ggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattag 26177939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 30182718 - 30182642
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| ||| |||||||||||||||||||||||||    
T  30182718 ggagagattgaactctccaatccactatcaatgagttcttcc-aaagagatagaaaagggttacaagaaattagcttt 30182642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 27637628 - 27637737
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagct 120  Q
    |||||||||| |||||||||   |||||||||||||| || |||  ||||| ||| ||||||| | ||||| |||||||| ||||||||||||||||| |    
T  27637628 gtccaacaatgacctactctgcaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaatgggttacaagaaattag-t 27637724  T
Q  121 ttcaacaagctca 133  Q
    || ||||||||||    
T  27637725 ttaaacaagctca 27637737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 12119692 - 12119594
Alignment:
Q  23 gtccaacaattacctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||| ||||||||||||||| || |||  ||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  12119692 gtccaacaatgacctactcttgggagagattgatctctccaatccactataaatgagttctttacaaagagatacaaaagggttacaagaaattagctt 12119594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 33090032 - 33089849
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||  ||||||||| ||||||||| | ||| |||||||| ||||| || |||||||| |    
T  33090032 gtccaacaataacctactctagaggagagattgatctctctaatccactatcaatgagttctttacagagagatacaaaatggttataataaattagc-t 33089934  T
Q  122 tcaacaagctcacaagtatcaaacctaattt---------tctcaacctcttcccataaacaagactctcaatgattttcactct 197  Q
    ||||||||||| | |  | ||||| ||||||         |||||| |||||||||| |||||||| ||||||||||||||||||    
T  33089933 tcaacaagctctccaagaacaaacataatttctattcatctctcaatctcttcccatgaacaagacactcaatgattttcactct 33089849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 379533 - 379405
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||| | |||||||||||||| || |||  ||||||||||||||||| | ||||  ||||||| |||||||||||||||||| |    
T  379533 gtccaacaatgacctactctggaggagagattgatctctccaatccactatcaattagttctt-acaaagcgatacaaatgggttacaagaaattagc-t 379436  T
Q  122 tcaacaagctcacaagtatcaaacctaattt 152  Q
    |||||||||||||||  | ||||||||||||    
T  379435 tcaacaagctcacaaagaacaaacctaattt 379405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 48142402 - 48142505
Alignment:
Q  34 acctactctagggagagattgatctttctaatttactat--caattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagct 131  Q
    ||||||| |||||||||||||||||||| ||| ||||||  |||| ||||||||| ||||| ||| | ||||||||||||||| |||| |||||||||||    
T  48142402 acctactgtagggagagattgatctttcaaatctactatatcaatgagttctttacaaagagatatacaagggttacaagaaactagc-ttcaacaagct 48142500  T
Q  132 cacaa 136  Q
    |||||    
T  48142501 cacaa 48142505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 26699457 - 26699570
Alignment:
Q  23 gtccaacaattacctactctaggg-agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||| ||  |||||||||||| || |||  | ||| ||| ||||||||| ||||| ||||||||| |||||||||||||||| |    
T  26699457 gtccaacaatgacctactctgggatagagattgatctctccaatccattataaatgagttctttacaaagagatacaaaagagttacaagaaattagc-t 26699555  T
Q  122 tcaacaagctcacaa 136  Q
    |||||||||||||||    
T  26699556 tcaacaagctcacaa 26699570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 3913591 - 3913489
Alignment:
Q  32 ttacctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagct 131  Q
    |||| |||||||||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| |||||| ||||||||||| |||||||| ||    
T  3913591 ttacatactctagggagagattgatctctccaatccactatcaatgagttc-ttacaaagatatacaaatgggttaaaagaaattagc-ttcaacaaact 3913494  T
Q  132 cacaa 136  Q
    |||||    
T  3913493 cacaa 3913489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 26175673 - 26175763
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  26175673 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattag-tttcaacaagctcacaa 26175763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 27417002 - 27417092
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| |||| |||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  27417002 gggagagattgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 27417092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 54199943 - 54200033
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||| |||||| ||||||| ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  54199943 gggagagaatgatctctctaattcactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 54200033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 5370121 - 5370211
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| |||| |  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||  ||||| ||||||    
T  5370121 ggagagattgatctctctagtccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttttgacaagttcacaa 5370211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 48143173 - 48143084
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| || |||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  48143173 ggagagattgatctctccaatccactatcaatgagttctt-atgaagagatacaaaagggttacaagaaattagc-ttcaacaagttcacaa 48143084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 56178675 - 56178764
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  56178675 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagc-ttcaacaagttcacaa 56178764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 12073545 - 12073417
Alignment:
Q  23 gtccaacaattacctactctagg-gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||| |  ||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| | ||||||| ||||||||||    
T  12073545 gtccaacaatgacctactctggaagagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaataaattagctt 12073447  T
Q  122 tcaacaagctcacaagtatcaaacctaattt 152  Q
     ||||||||||||||  | ||||||||||||    
T  12073446 -caacaagctcacaaagaacaaacctaattt 12073417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 22882767 - 22882864
Alignment:
Q  23 gtccaacaattacctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||  ||| ||||||||| | ||||||  |||| |||| |||||||||  |||| ||||||||||||||||||||||||||||    
T  22882767 gtccaacaatgacctactccgggg-gagattgatttctctaatccactaccaatgagttctttacgaagagatacaaaagggttacaagaaattagctt 22882864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 22934431 - 22934528
Alignment:
Q  23 gtccaacaattacctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||  ||| ||||||||| | ||||||  |||| |||| |||||||||  |||| ||||||||||||||||||||||||||||    
T  22934431 gtccaacaatgacctactccgggg-gagattgatttctctaatccactaccaatgagttctttacgaagagatacaaaagggttacaagaaattagctt 22934528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 50262716 - 50262828
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||| | ||| |||||||| | || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| |    
T  50262716 gtccaacaatgacctactctggaggaaagattgatatctccaatcaactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-t 50262813  T
Q  122 tcaacaagctcacaa 136  Q
    |||||||||||||||    
T  50262814 tcaacaagctcacaa 50262828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 34112969 - 34112862
Alignment:
Q  23 gtccaacaattacctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||| ||||||| ||||| ||||  ||||| || | || ||||||||| ||||||||| ||||| || ||||||||||||| ||||||||| ||    
T  34112969 gtccaacaatgacctactataggg-gagagagatctctccacttcactatcaatgagttctttacaaagagatgcaaaagggttacatgaaattagc-tt 34112872  T
Q  123 caacaagctc 132  Q
    ||||||||||    
T  34112871 caacaagctc 34112862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 4588090 - 4588000
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||| ||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  4588090 gggagagattgttctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagc-ttcaacaagcttacaa 4588000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 9927495 - 9927585
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  9927495 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 9927585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 36994655 - 36994565
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||  ||||||| |||||||||||||||||| ||||||||||||||||    
T  36994655 gggagagattgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 36994565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 37740756 - 37740666
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  37740756 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 37740666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 2209867 - 2209754
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagct 120  Q
    ||||||| || ||||||||| | ||||||||| |||| || |||  ||||||||| ||||||| | ||||| |||||||| ||||||||||||||||||     
T  2209867 gtccaaccatgacctactctggaggagagattaatctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagc- 2209770  T
Q  121 ttcaacaagctcacaa 136  Q
    ||||||||||||||||    
T  2209769 ttcaacaagctcacaa 2209754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 8665538 - 8665453
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  8665538 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctc 8665453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 40632575 - 40632486
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||  ||||||||||||||||| ||||||||||||||||    
T  40632575 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagc-ttcaacaagctcacaa 40632486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 46703654 - 46703541
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagct 120  Q
    |||||||||| ||||||||| | |||||||||||||| || |||  ||||| ||| ||||||| | ||||| |||||||| ||||||||||||||||||     
T  46703654 gtccaacaatgacctactctggaggagagattgatctctccaatccactataaatgagttctt-acaaagagatacaaaatgggttacaagaaattagc- 46703557  T
Q  121 ttcaacaagctcacaa 136  Q
    || |||||||||||||    
T  46703556 ttaaacaagctcacaa 46703541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 50673885 - 50673974
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  50673885 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 50673974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 54883150 - 54883061
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||  || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  54883150 ggagagattgatccctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 54883061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 5429810 - 5429722
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcac 134  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||| | ||||||| |||||||||||||||||| ||||||||||||||    
T  5429810 gggagagattgatctctccaatccactatcaatgagttctt-acaaatagatacaaatgggttacaagaaattagc-ttcaacaagctcac 5429722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 12743962 - 12744039
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  12743962 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttt 12744039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 12745351 - 12745428
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  12745351 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttt 12745428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 6542216 - 6542306
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  6542216 gggagagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaaaggctaacaagaaattag-tttcaacaagctcacaa 6542306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 6677597 - 6677514
Alignment:
Q  48 gagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||| || |||  | ||||||  | ||||||| ||||| |||||||||||||||||||||||||| ||||||||||||    
T  6677597 gagattgatctctcaaatccattatcaaagacttctttacaaagatatacaaaagggttacaagaaattagc-ttcaacaagctc 6677514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 24969219 - 24969153
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  24969219 actatcaattagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 24969153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 34570451 - 34570541
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||  |||||||||||||||||| ||||||||| ||||||    
T  34570451 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaattgggttacaagaaattagc-ttcaacaagttcacaa 34570541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 36463426 - 36463516
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||| ||||  ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  36463426 gggagagattgatctctccaatccactgtcaaagagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 36463516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 48893675 - 48893765
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  48893675 gggagagattgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 48893765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 12744087 - 12744161
Alignment:
Q  47 agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  12744087 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttt 12744161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 44570427 - 44570489
Alignment:
Q  69 ctatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    |||||||| ||||||||| ||||| ||||||||  ||||||||||||||| |||||||||||||    
T  44570427 ctatcaatgagttctttacaaagagatacaaaaatgttacaagaaattag-tttcaacaagctc 44570489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 6656085 - 6655997
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||| ||||||    
T  6656085 gagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagttcacaa 6655997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 33989997 - 33989899
Alignment:
Q  24 tccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||| ||| ||||||||| | |||||||||||||| || |||  ||||| ||  |||| |||| ||||| |||||||||| |||||||||||||||||    
T  33989997 tccaagaatgacctactctggtggagagattgatctctccaatccactattaacgagttatttacaaagagatacaaaaggattacaagaaattagctt 33989899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 53345315 - 53345258
Alignment:
Q  78 agttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||| ||| | ||| ||||||||||||||||||||| |||||||||||||||||    
T  53345315 agttctttacaaaaagatataaaagggttacaagaaattag-tttcaacaagctcacaa 53345258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 29999844 - 29999921
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| |||||||   ||| | ||||||||| |||||||||||||||||||    
T  29999844 ggagagattgatctctccaatccactatcaatgagttcttacaaaaaagatacaaaagagttacaagaaattagcttt 29999921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 51337195 - 51337123
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    ||||||||||||||| ||||||  ||||||||| ||||| ||| ||||| |||||||||||||| || ||||||    
T  51337195 gggagagattgatctctctaatacactatcaatgagttc-ttaaaaagagatacaaaagggttataataaatta 51337123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 26364367 - 26364277
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||| ||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||| ||||||    
T  26364367 gggagagattgatctctccaatccactattaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagttcacaa 26364277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 46147428 - 46147518
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||| | || |||  ||||||||  ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  46147428 gggagagattgatgtctccaatccactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 46147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 52467391 - 52467497
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  ||||||||  |||| || | ||||  ||||||| ||||||||||| |||||| ||||||||||||||||  | |||    
T  52467391 gggagagattgatctctccaatccactatcaaaaagttatt-acaaagtgatacaaatgggttacaagatattagc-ttcaacaagctcacaaagaacaa 52467488  T
Q  144 acctaattt 152  Q
    |||||||||    
T  52467489 acctaattt 52467497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 8648269 - 8648180
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  | ||||||| ||||||| | ||||| ||||||| |||||| ||||||||||| |||||||| |||||||    
T  8648269 ggagagattgatctctccaatccaatatcaatgagttctt-acaaagagatacaaatgggttataagaaattagc-ttcaacaaactcacaa 8648180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 12745476 - 12745546
Alignment:
Q  47 agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    |||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||    
T  12745476 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattag 12745546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 12739587 - 12739664
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||||||| || |||  ||||||||| ||||| | | ||| | ||||||| |||||||||||||||||||||    
T  12739587 gggagagattgatctctccaatccactatcaatgagttcat-acaaatagatacaaatgggttacaagaaattagcttt 12739664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 12747793 - 12747870
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||||||| || |||  ||||||||| ||||| | | ||| | ||||||| |||||||||||||||||||||    
T  12747793 gggagagattgatctctccaatccactatcaatgagttcat-acaaatagatacaaatgggttacaagaaattagcttt 12747870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 32091575 - 32091527
Alignment:
Q  79 gttctttataaagaaatacaaaagggttacaagaaattagctttcaacaa 128  Q
    |||||||| ||||| ||||||||| ||||||||||||||| |||||||||    
T  32091575 gttctttacaaagagatacaaaagagttacaagaaattag-tttcaacaa 32091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 52095400 - 52095476
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||  | ||||| | ||||| ||||||| |||||||||||||||||||||    
T  52095400 ggagagattgatctctccaatccactatcaaagatttctt-acaaagagatacaaatgggttacaagaaattagcttt 52095476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 5871951 - 5871845
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| ||||||  ||||||||  ||||| ||  ||||  ||| ||| ||||||||||||||| || || |||||||||||||  | |||    
T  5871951 gggagagattgatctctctaatccactatcaaagagttc-ttgcaaagtgataaaaatgggttacaagaaatttgc-ttaaacaagctcacaaagaacaa 5871854  T
Q  144 acctaattt 152  Q
    |||||||||    
T  5871853 acctaattt 5871845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 31474281 - 31474206
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||| |||| || |||  ||||||||| ||||||| | ||||| ||||||| | ||||||||||||||||||    
T  31474281 ggagagatttatctctccaatcaactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagctt 31474206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 34788847 - 34788898
Alignment:
Q  80 ttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||| ||||| ||||||||| |||||||||||||| | ||||||||||||    
T  34788847 ttctttacaaagagatacaaaagagttacaagaaattaac-ttcaacaagctc 34788898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 35662571 - 35662496
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||| |||||||| || |||  ||||||||| ||||||| | ||||| ||||||| | ||||||||||||||||||    
T  35662571 ggagatattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagctt 35662496  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 41639556 - 41639481
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||||||| || |||  |||||| || ||||||| | ||| | ||||||| ||||||||||||||||||||    
T  41639556 ggagagattgatctctccaatccactatcgatgagttctt-acaaatagatacaaatgggttacaagaaattagctt 41639481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 41964546 - 41964456
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||| ||| ||||  |||||||| ||||||||| |||||||| || |||||||||||||    
T  41964546 ggagagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaaatgggttacaataaattagc-ttaaacaagctcacaa 41964456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 55085445 - 55085492
Alignment:
Q  88 aaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||| ||||||| || ||||||||||||||| ||||||||||||||||    
T  55085445 aaagagatacaaatggtttacaagaaattagc-ttcaacaagctcacaa 55085492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 33648325 - 33648212
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||| | |||||||||||||| || |||   |||||||| ||||||||| |||||||||||||||||||||| ||||||||| |    
T  33648325 gtccaacaatgacctactctggaggagagattgatctctccaatccgctatcaatgagttctttacaaagaaatacaaaagggttacaggaaattagc-t 33648227  T
Q  122 tcaacaagctcacaa 136  Q
    |||||||||||||||    
T  33648226 tcaacaagctcacaa 33648212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 24398211 - 24398098
Alignment:
Q  23 gtccaacaattacctactctaggg-agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||| | ||| |||||||||||| || |||  | ||||||| ||||||||| ||||| |||||||||||||||||||||||||| |    
T  24398211 gtccaacaatgacctactatgggggagagattgatctctccaatccattatcaatgagttctttacaaagagatacaaaagggttacaagaaattagc-t 24398113  T
Q  122 tcaacaagctcacaa 136  Q
    |||||||||||||||    
T  24398112 tcaacaagctcacaa 24398098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 32289694 - 32289621
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    |||||||||||||| ||||||||||||||||| |||||||   ||||| ||||||||| |||||||||||||||    
T  32289694 ggagagattgatctctctaatttactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattag 32289621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 33162487 - 33162577
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| ||||||  ||||||||| ||||| ||| | ||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  33162487 gggagagattgatctctctaatccactatcaatgagttc-ttacagagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 33162577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 36318035 - 36318136
Alignment:
Q  34 acctactcta-gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    |||||||||| ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| ||||||||| ||||||| |||||||||||||    
T  36318035 acctactctaagggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaataaattag-tttcaacaagctc 36318132  T
Q  133 acaa 136  Q
    ||||    
T  36318133 acaa 36318136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 5723282 - 5723370
Alignment:
Q  34 acctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||| ||||||||||||||||||||    
T  5723282 acctactctagaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaaaggttacaagaaattagcttt 5723370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 723781 - 723887
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||  ||||||| |||||||||||||||||| || |||||||||||||  | |||    
T  723781 gggagagattgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagc-ttaaacaagctcacaaagaacaa 723878  T
Q  144 acctaattt 152  Q
    |||||||||    
T  723879 acctaattt 723887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 11049684 - 11049594
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatac-aaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||||  ||| |||||||||| ||||| ||| ||||| |||| |||||||||| ||||||||||| ||||||||||||||||    
T  11049684 ggagagattgatcttttcaatctactatcaatgagttc-ttacaaagagatactaaaagggttataagaaattagc-ttcaacaagctcacaa 11049594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 17490174 - 17490275
Alignment:
Q  34 acctactctaggg-agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||||| |||||||||||| |  |||  ||||||||| ||||||| | |||||  |||||||| |||||||||||||||| ||||||||||||    
T  17490174 acctactctaggggagagattgatctctacaatccactatcaatgagttctt-acaaagagttacaaaagagttacaagaaattagc-ttcaacaagctc 17490271  T
Q  133 acaa 136  Q
    ||||    
T  17490272 acaa 17490275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 45727059 - 45726970
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||  ||||||||||||||||| ||||||||||||||||    
T  45727059 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagc-ttcaacaagctcacaa 45726970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 42019885 - 42019986
Alignment:
Q  23 gtccaacaattacctactctaggga-gagattgatctttctaatttactatcaattagttctttata--aagaaatacaaaagggttacaagaaattagc 119  Q
    |||||||||| ||||||| | |||| ||||||||||| || |||| ||||||||| |||| ||| ||  |||| ||||||||| ||||||||||||||||    
T  42019885 gtccaacaataacctactatggggaagagattgatctctcaaattcactatcaatgagttttttttacaaagagatacaaaagagttacaagaaattagc 42019984  T
Q  120 tt 121  Q
    ||    
T  42019985 tt 42019986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 42288137 - 42288237
Alignment:
Q  34 acctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    ||||| ||| ||||||||||||||| || |||  | ||||||| || |||| | ||||||||||||| ||||||||| |||||||| |||||||||||||    
T  42288137 acctaatctggggagagattgatctctccaatccattatcaatgagctctt-acaaagaaatacaaatgggttacaataaattagc-ttcaacaagctca 42288234  T
Q  134 caa 136  Q
    |||    
T  42288235 caa 42288237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 4484368 - 4484445
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| |||||||||||||||||||||||||||||    
T  4484368 ggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattagcttt 4484445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 36773693 - 36773603
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  36773693 gggagagattgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 36773603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 38312371 - 38312281
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| || |||| | ||||| ||||||| ||||||||||||||||| |||||||||| ||||||    
T  38312371 gggagagattgatctctccaatccactatcaatgagatctt-acaaagagatacaaatgggttacaagaaattag-tttcaacaagttcacaa 38312281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 42261546 - 42261609
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||| ||| ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||    
T  42261546 actatcaatgagtactttacaaagatatacaaaagagttacaagaaattagc-ttcaacaagctc 42261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 42362483 - 42362377
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||| ||||| || |||  ||||||||| ||||||| | ||||  ||||||| |||||||||||||||||| || |||||||||||||  | |||    
T  42362483 gggagagatagatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagc-ttaaacaagctcacaaagaacaa 42362386  T
Q  144 acctaattt 152  Q
    |||||||||    
T  42362385 acctaattt 42362377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 1631770 - 1631859
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||| | || |||  ||||||||| ||||||| | ||||| ||||||| ||||||||||| |||||| ||||||||||||||||    
T  1631770 ggagagattgatttctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagatattagc-ttcaacaagctcacaa 1631859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 2334456 - 2334545
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||||| ||||| |||||||||| ||||||||| ||||||    
T  2334456 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttactagaaattagc-ttcaacaagttcacaa 2334545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 6595044 - 6595133
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||  ||||||| | ||||| || ||||||||||||||||||||||| ||||||||| ||||||    
T  6595044 ggagagattgatctctccaatccactatcaacgagttctt-acaaagagattcaaaagggttacaagaaattagc-ttcaacaagttcacaa 6595133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 28672084 - 28671989
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    |||||||||| ||||||||| | |||||||||||||| || |||  ||| ||| | |||||||| |||||| |||||||| ||| |||||||||||    
T  28672084 gtccaacaatgacctactctggaggagagattgatctctccaatccactgtcagtgagttctttgtaaagagatacaaaacggtaacaagaaatta 28671989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 29868000 - 29867923
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  29868000 gggagagattgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttt 29867923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 30218056 - 30218158
Alignment:
Q  20 tcagtccaacaattacctactctaggg-agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    ||||||||||||| || |||||| ||| || |||||||||||  ||   ||||||||| | || |||| ||||| |||||||| ||||||||||||||||    
T  30218056 tcagtccaacaatgacttactctgggggagtgattgatcttttcaacccactatcaatgaattatttacaaagagatacaaaatggttacaagaaattag 30218155  T
Q  119 ctt 121  Q
    |||    
T  30218156 ctt 30218158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 36988114 - 36988202
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcaca 135  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||||| ||||||||||||||| |||  |||||||||||    
T  36988114 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattag-ttttgacaagctcaca 36988202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 30833476 - 30833399
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| |||||||||||||||||||||||| ||||    
T  30833476 ggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattaacttt 30833399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 14633862 - 14633953
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  |||||| || |||||||   ||||  ||||||| |||||||||||||||||| || |||||||||||||    
T  14633862 gggagagattgatctctccaatccactatctatgagttcttacaaaagggatacaaatgggttacaagaaattagc-ttaaacaagctcacaa 14633953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 34139807 - 34139898
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| |||||||   ||||  ||||| | |||||||||||||||||| || |||||||||||||    
T  34139807 gggagagattgatctctccaatccactatcaatgagttcttacaaaagggatacatatgggttacaagaaattagc-ttaaacaagctcacaa 34139898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 17057406 - 17057491
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagct 131  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| | ||||||| |||||||| |||||||||||    
T  17057406 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaaaaaattagc-ttcaacaagct 17057491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 17085389 - 17085474
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagct 131  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| | ||||||| |||||||| |||||||||||    
T  17085389 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaaaaaattagc-ttcaacaagct 17085474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 26353326 - 26353225
Alignment:
Q  34 acctactcta-gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    |||||||||| |||||||| |||||| || |||  ||||||||| ||| ||| | ||| | ||||||||| |||||||||||||||| |||||||| |||    
T  26353326 acctactctaagggagagagtgatctctccaatccactatcaatgagtactt-acaaaaagatacaaaagtgttacaagaaattagc-ttcaacaaactc 26353229  T
Q  133 acaa 136  Q
    ||||    
T  26353228 acaa 26353225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 35446922 - 35447011
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||| |||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||  ||||||||| ||||||    
T  35446922 ggagagagtgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattag-attcaacaagatcacaa 35447011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 4503171 - 4503246
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| |  |||| ||||||||| |||||||||||||||||||    
T  4503171 ggagagattgaactctccaatccactatcaatgagttcttca--aagagatacaaaagagttacaagaaattagcttt 4503246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 7815311 - 7815395
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagct 131  Q
    ||||||||| |||| || |||  ||||| ||| ||||||| | ||||| ||||||||| |||||||||||||||| |||||||||||    
T  7815311 ggagagattaatctctccaatccactataaatgagttctt-acaaagagatacaaaagagttacaagaaattagc-ttcaacaagct 7815395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 11690583 - 11690526
Alignment:
Q  94 atacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaacctaattt 152  Q
    ||||||| |||||||||||||||||| || |||||||||||||  | ||||||||||||    
T  11690583 atacaaatgggttacaagaaattagc-ttaaacaagctcacaaagaacaaacctaattt 11690526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 41446237 - 41446184
Alignment:
Q  78 agttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||||||| |||||||||||||||   |||||||| ||||||||||||    
T  41446237 agttctttataaagagatacaaaagggttacttaaaattagc-ttcaacaagctc 41446184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 45099884 - 45099809
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| |  |||| ||||||||| |||||||||||||||||||    
T  45099884 ggagagattgaactctccaatccactatcaatgagttcttca--aagagatacaaaagagttacaagaaattagcttt 45099809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 24885742 - 24885686
Alignment:
Q  95 tacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaacctaattt 152  Q
    |||||| |||||||||||||||||| || |||||||||||||  | ||||||||||||    
T  24885742 tacaaatgggttacaagaaattagc-ttaaacaagctcacaaagaacaaacctaattt 24885686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 11067393 - 11067346
Alignment:
Q  88 aaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||| ||||||| |||||||||||||||||||||  ||||||||||||    
T  11067393 aaagagatacaaatgggttacaagaaattagcttt-gacaagctcacaa 11067346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 41454342 - 41454279
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||| ||||||||| ||| | ||||||||| ||| | |||||||||| ||||||||||||    
T  41454342 actatcaatgagttctttacaaatatatacaaaagagttgctagaaattagc-ttcaacaagctc 41454279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 7469 - 7368
Alignment:
Q  34 acctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||| ||||||||||||||||| |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  7469 acctactctagaggagagattgatctttccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctc 7372  T
Q  133 acaa 136  Q
    ||||    
T  7371 acaa 7368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 5043780 - 5043652
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||| | | |||||||||||||| || ||| |||||||||| ||||| ||| ||||| ||||||| | |||||||||||||||| |    
T  5043780 gtccaacaatgacctactatggaggagagattgatctctccaatctactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagc-t 5043683  T
Q  122 tcaacaagctcacaagtatcaaacctaattt 152  Q
    |||||||||||||||  | ||||||||||||    
T  5043682 tcaacaagctcacaaagaacaaacctaattt 5043652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 152
Target Start/End: Original strand, 2972977 - 2973082
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaa 144  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||  | ||||    
T  2972977 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaaagaacaaa 2973074  T
Q  145 cctaattt 152  Q
    ||||||||    
T  2973075 cctaattt 2973082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 28137445 - 28137535
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||||||||||| |||||||||||||||||| || |||||||||||||    
T  28137445 gggagagattgatctctccaatccactatcaatgagttctt-acaaagaaatacaaatgggttacaagaaattagc-ttaaacaagctcacaa 28137535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 21589061 - 21588972
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  21589061 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 21588972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 21593794 - 21593705
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  21593794 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 21593705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 5406238 - 5406314
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  5406238 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 5406314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 5410563 - 5410639
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  5410563 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 5410639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 5413432 - 5413508
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  5413432 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 5413508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 17758163 - 17758064
Alignment:
Q  36 ctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcac 134  Q
    ||||||||| || ||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  17758163 ctactctagaggggagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcac 17758066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 31404713 - 31404789
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  31404713 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 31404789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 3808746 - 3808836
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||| ||| ||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  3808746 ggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattag-tttcaacaagctcacaa 3808836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 25073698 - 25073611
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcac 134  Q
    ||||||||||| | ||||||  ||||||||| ||||||||| | ||| ||||||||||||||||| ||| ||||||| |||||||||||    
T  25073698 gagagattgatttctctaatccactatcaatgagttctttacatagagatacaaaagggttacaataaaatagcttt-aacaagctcac 25073611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 26830161 - 26830250
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| || ||||||||||||||| ||||||||||||||||    
T  26830161 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatggattacaagaaattagc-ttcaacaagctcacaa 26830250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 603125 - 603215
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||| | || |||  ||||||||  ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  603125 gggagagattgatttctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 603215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 9183069 - 9183144
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| ||||||||||||||||||||    
T  9183069 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctt 9183144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 26954323 - 26954413
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||| | | |||||||||||||||| ||||||||||||||||    
T  26954323 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacagatgagttacaagaaattagc-ttcaacaagctcacaa 26954413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 22424841 - 22424954
Alignment:
Q  23 gtccaacaattacctactct-agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa--gggttacaagaaattagc 119  Q
    |||||||||| ||||||||| | |||||||||||||| || |||  ||||| ||| ||||||| | ||||| ||||||||  ||||||||||||||||||    
T  22424841 gtccaacaatgacctactctgaaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaaatgggttacaagaaattagc 22424938  T
Q  120 tttcaacaagctcacaa 136  Q
     || |||||||||||||    
T  22424939 -ttaaacaagctcacaa 22424954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 30834574 - 30834650
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| |||||||||||||||||||||||||||||    
T  30834574 ggagagattgaactctccaatccactatcaatgagttcttcc-aaagagatacaaaagggttacaagaaattagcttt 30834650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 33160390 - 33160466
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  || |||||| ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  33160390 ggagagattgatctctccaatccaccatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttt 33160466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 4045548 - 4045467
Alignment:
Q  51 attgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    |||||||| || |||  ||||||||| |||| |||| ||||| ||| |||| | ||||||||||||||| |||||||||||||    
T  4045548 attgatctctccaatccactatcaatgagttatttacaaagagatataaaatgattacaagaaattagc-ttcaacaagctca 4045467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 5740068 - 5740121
Alignment:
Q  78 agttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||| |||||||||||||||| |||||| ||||| | |||||||||||||    
T  5740068 agttctttacaaagaaatacaaaaggtttacaataaatt-ggtttcaacaagctc 5740121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 2171570 - 2171645
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  2171570 ggagagattgaactctccaatccactatcaatgagttctt-acaaagagatacaaa-gggttacaagaaattagcttt 2171645  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 26800740 - 26800630
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagg-gttacaagaaattagct 120  Q
    |||||||||| ||||||||| | |||||||||||||| || |||  ||||| ||| ||||||| | ||||| ||||||||   ||||||||||||||||     
T  26800740 gtccaacaatgacctactctggaggagagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaattagttacaagaaattagc- 26800644  T
Q  121 ttcaacaagctcac 134  Q
    ||||||||||||||    
T  26800643 ttcaacaagctcac 26800630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 3038983 - 3039030
Alignment:
Q  88 aaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||| ||||||| |||||||||||||||||| ||||| ||||||||||    
T  3038983 aaagagatacaaatgggttacaagaaattagc-ttcaaaaagctcacaa 3039030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 3460838 - 3460737
Alignment:
Q  34 acctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    |||||||||||| ||| |||||||| || |||  |||||||||  |||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||    
T  3460838 acctactctaggaagatattgatctctccaatcgactatcaatatgttctttacaaagatatacaaaagggttacaataaattagc-ttcaacaagctca 3460740  T
Q  134 caa 136  Q
    |||    
T  3460739 caa 3460737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 47255355 - 47255467
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||| | |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| |    
T  47255355 gtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-t 47255452  T
Q  122 tcaacaagctcacaa 136  Q
    |||||||||||||||    
T  47255453 tcaacaagctcacaa 47255467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 37559905 - 37559996
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||| ||||||||  ||||||| | ||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  37559905 gggagagattgatctctccaattcactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagctttcaacaagttcacaa 37559996  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 31925733 - 31925834
Alignment:
Q  34 acctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||| |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  31925733 acctactctagaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctc 31925830  T
Q  133 acaa 136  Q
    ||||    
T  31925831 acaa 31925834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 31659370 - 31659279
Alignment:
Q  43 agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  31659370 agggagagattgatctctccaatccactatcaataagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 31659279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 6808604 - 6808497
Alignment:
Q  25 ccaacaattacctactct-agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttc 123  Q
    |||||||| ||||||||| ||| |||||||||||| || |||  ||||| ||| ||||||||| ||||| ||||||||| |||||||||| ||||| |||    
T  6808604 ccaacaataacctactctgaggaagagattgatctctccaatccactataaatgagttctttacaaagagatacaaaagagttacaagaagttagc-ttc 6808506  T
Q  124 aacaagctc 132  Q
    |||||||||    
T  6808505 aacaagctc 6808497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 50167212 - 50167318
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  ||||||||| |||| |||| ||||| ||||||| |||||||||||||||||||||  |||||||||||| || |||    
T  50167212 gggagagattgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagcttt-gacaagctcacaaataacaa 50167309  T
Q  144 acctaattt 152  Q
     ||||||||    
T  50167310 ccctaattt 50167318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 11348828 - 11348739
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  11348828 ggagagattgatctctccaatccactatcaatgagttctt-agaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 11348739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 22079447 - 22079357
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||| |||||||| || |||  | ||||||| ||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||    
T  22079447 ggagaaattgatctctccaatccaatatcaatgagttctttacaaagagatacaaaatggttacaagaaattagcttt-aacaagctcacaa 22079357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 5460062 - 5459961
Alignment:
Q  20 tcagtccaacaattacctactctagg-gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    |||| |||||||| | |||||||||  ||||||||||||| || ||| |||||||||| ||||||||| ||||||||| ||||  |||||||||||||||    
T  5460062 tcagcccaacaatgatctactctagatgagagattgatctctccaatctactatcaatgagttctttacaaagaaatataaaa-tgttacaagaaattag 5459964  T
Q  119 ctt 121  Q
    |||    
T  5459963 ctt 5459961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 19754627 - 19754536
Alignment:
Q  43 agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||  ||||||||||||||||| ||||||||||||||||    
T  19754627 agggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatcggttacaagaaattagc-ttcaacaagctcacaa 19754536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 3156996 - 3156906
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  3156996 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 3156906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 7482268 - 7482358
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||| ||||||||| ||||| ||| ||||| |||||||| |||||||||||||||||| || |||||||||||||    
T  7482268 ggagagattgatctctccaattcactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagc-ttaaacaagctcacaa 7482358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 28220263 - 28220353
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  28220263 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 28220353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 28265591 - 28265681
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  28265591 gggagagattgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 28265681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Complemental strand, 41361045 - 41360939
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    |||||| |||||||| | ||||  ||||||||  ||||||| | ||||| ||||||| ||||||||||||||||| |||||||||||||||||  | |||    
T  41361045 gggagatattgatctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattag-tttcaacaagctcacaaagaacaa 41360948  T
Q  144 acctaattt 152  Q
    |||||||||    
T  41360947 acctaattt 41360939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 49918481 - 49918391
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  49918481 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 49918391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 4552663 - 4552764
Alignment:
Q  34 acctactct-agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||| |||||||||||||||| || |||  | ||||||| ||||||| | ||||  ||||||| |||||||||||||||||| ||||||||||||    
T  4552663 acctactctgagggagagattgatctctccaatccattatcaatgagttctt-acaaagggatacaaaggggttacaagaaattagc-ttcaacaagctc 4552760  T
Q  133 acaa 136  Q
    ||||    
T  4552761 acaa 4552764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 13547127 - 13547216
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| ||||||||||||| |||| ||||||||||||||||    
T  13547127 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaaatagc-ttcaacaagctcacaa 13547216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 29136377 - 29136288
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  || |||||| ||||||| | ||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  29136377 ggagagattgatctctccaatccacgatcaatgagttctt-acaaagaaatacaaatgggttccaagaaattagc-ttcaacaagctcacaa 29136288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 2262991 - 2263100
Alignment:
Q  25 ccaacaattacctactcta-gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttc 123  Q
    |||||||| |||||| ||| |||| |||||||||| |  |||  ||||||||| ||||||||| ||| | ||| |||||||||||||||||||| | |||    
T  2262991 ccaacaatgacctaccctaagggaaagattgatctcttcaatccactatcaataagttctttacaaaaagatataaaagggttacaagaaattatc-ttc 2263089  T
Q  124 aacaagctcac 134  Q
    |||||||||||    
T  2263090 aacaagctcac 2263100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 42297990 - 42298102
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||| || ||||||||| | |||||||||||||| |  |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| |    
T  42297990 gtccaaccatgacctactctggaggagagattgatctcttcaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-t 42298087  T
Q  122 tcaacaagctcacaa 136  Q
    |||||||||||||||    
T  42298088 tcaacaagctcacaa 42298102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 15820414 - 15820331
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaacctaatttt 153  Q
    ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||  | |||||||||||||    
T  15820414 actatcaatgagttcttaa-aaagagatacaaatgtgttacaagaaattagc-ttcaacaagctcacaaagaacaaacctaatttt 15820331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 20762802 - 20762726
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| ||||||| |  |||| |||||||||||||||||||||||||||||    
T  20762802 ggagagattgatctctccaatccactatcaatgagttctt-acgaagagatacaaaagggttacaagaaattagcttt 20762726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 28223458 - 28223534
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| ||||||||||||||||||||    
T  28223458 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctt 28223534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 16455750 - 16455664
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcac 134  Q
    ||||||||||||| || |||  ||||||||| ||||||| | | ||| ||||||| |||||||||||||||||| ||||||||||||||    
T  16455750 gagagattgatctctccaatccactatcaatgagttctt-acacagagatacaaatgggttacaagaaattagc-ttcaacaagctcac 16455664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 37168428 - 37168338
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||| |||||||||||||||||| || |||||||||||||    
T  37168428 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagc-ttaaacaagctcacaa 37168338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 152
Target Start/End: Original strand, 8550825 - 8550930
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaa 144  Q
    |||||||||||||| || |||  ||||||||| ||||| ||| ||||  ||||||| | |||||||||||||||| || |||||||||||||  | ||||    
T  8550825 ggagagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgagttacaagaaattagc-ttaaacaagctcacaaagaacaaa 8550922  T
Q  145 cctaattt 152  Q
    ||||||||    
T  8550923 cctaattt 8550930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 13549038 - 13549127
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| |||||||| |||||||| ||| |||||||||||||    
T  13549038 ggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacatgaaattaggttt-aacaagctcacaa 13549127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 47115325 - 47115212
Alignment:
Q  23 gtccaacaattacctactctaggg-agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagct 120  Q
    |||||||||| ||||||||| | | |||||||||||| || |||  |||||||||  ||| |||| ||||| |||||||| ||||||||||||||||||     
T  47115325 gtccaacaatgacctactctggagcagagattgatctctccaatccactatcaatgggtt-tttacaaagagatacaaaatgggttacaagaaattagc- 47115228  T
Q  121 ttcaacaagctcacaa 136  Q
    || |||||||||||||    
T  47115227 ttaaacaagctcacaa 47115212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 9109459 - 9109529
Alignment:
Q  47 agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    |||||||||||| || |||  ||||||||   |||||||| ||||| ||||||||||||||||||||||||    
T  9109459 agagattgatctctccaatacactatcaacgtgttctttacaaagagatacaaaagggttacaagaaatta 9109529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 928051 - 928103
Alignment:
Q  83 tttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||| ||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  928051 tttacaaagagatccaaaagggttacaagaaattagc-ttcaacaagctcacaa 928103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 13316390 - 13316466
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| |||||||||||||||||||||||||||||    
T  13316390 ggagagattgaactctccaatccactatcaatgagttcttcc-aaagagatacaaaagggttacaagaaattagcttt 13316466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 37282729 - 37282829
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaa 144  Q
    ||||||||| |||| || |||  ||||  ||| ||||||||| ||||| || |||||||||||| | |||||||| ||||||||||||||||| | ||||    
T  37282729 ggagagatttatctctccaatccactactaatgagttctttacaaagagatgcaaaagggttaccataaattagc-ttcaacaagctcacaaggaacaaa 37282827  T
Q  145 cc 146  Q
    ||    
T  37282828 cc 37282829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 46065049 - 46064942
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  ||||| ||| ||||||| | ||||| ||||| | | |||||||||||||||| |||||| |||||||||  | |||    
T  46065049 gggagagattgatctctccaatccactatgaatgagttctt-acaaagagatacacatgagttacaagaaattagc-ttcaacgagctcacaaagaacaa 46064952  T
Q  144 acctaatttt 153  Q
    ||||||||||    
T  46064951 acctaatttt 46064942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 834204 - 834294
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||| ||||| || |||  ||||||||| ||||||| | ||||  ||||||| |||||||||||||||||| || |||||||||||||    
T  834204 gggagagatagatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagc-ttaaacaagctcacaa 834294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 10925370 - 10925264
Alignment:
Q  32 ttacctactctaggg-agagattgatctttctaatttactatcaattagttctt--tataaagaaatacaaaagggttacaagaaattagctttcaacaa 128  Q
    ||||||| ||||||| |||||||||| | || |||  ||||||||| | |||||  || ||||| ||||||| | |||||||||||||||| ||||||||    
T  10925370 ttacctaatctaggggagagattgatttctccaatccactatcaatgaattcttcttacaaagagatacaaatgagttacaagaaattagc-ttcaacaa 10925272  T
Q  129 gctcacaa 136  Q
    ||||||||    
T  10925271 gctcacaa 10925264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 13659373 - 13659463
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||| ||| |||| ||||||||||||| ||||||||||| ||||    
T  13659373 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatataaatgggtaacaagaaattagc-ttcaacaagcttacaa 13659463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 44455291 - 44455201
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||| | ||||||| | ||||||||||||||| |||||||||| ||||||    
T  44455291 gggagagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaatgagttacaagaaattag-tttcaacaagttcacaa 44455201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 13138002 - 13138103
Alignment:
Q  34 acctactctaggg-agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||||| |||||||| ||| |  |||  |||||||||  |||||| | ||||| || |||| |||||||||||||||||| ||||||||||||    
T  13138002 acctactctaggggagagattgctctcttcaatccactatcaatgtgttctt-acaaagagatgcaaatgggttacaagaaattagc-ttcaacaagctc 13138099  T
Q  133 acaa 136  Q
    ||||    
T  13138100 acaa 13138103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 37503594 - 37503698
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||   ||||||||||||||||| ||||||||| ||||||  | |||    
T  37503594 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaa---ggttacaagaaattagc-ttcaacaagttcacaaagaacaa 37503688  T
Q  144 acctaatttt 153  Q
     |||||||||    
T  37503689 ccctaatttt 37503698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 3189459 - 3189371
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||| || |||  ||||||||| ||||||| | ||| | ||||||||| |||||| ||||||||| ||||||||| ||||||    
T  3189459 gagagattgatctctccaatccactatcaatgagttctt-acaaaaagatacaaaagagttacaggaaattagc-ttcaacaagttcacaa 3189371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 3198276 - 3198188
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||| || |||  ||||||||| ||||||| | ||| | ||||||||| |||||| ||||||||| ||||||||| ||||||    
T  3198276 gagagattgatctctccaatccactatcaatgagttctt-acaaaaagatacaaaagagttacaggaaattagc-ttcaacaagttcacaa 3198188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 3207115 - 3207027
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||| || |||  ||||||||| ||||||| | ||| | ||||||||| |||||| ||||||||| ||||||||| ||||||    
T  3207115 gagagattgatctctccaatccactatcaatgagttctt-acaaaaagatacaaaagagttacaggaaattagc-ttcaacaagttcacaa 3207027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 12318585 - 12318646
Alignment:
Q  70 tatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||| ||||||| |  |||| |||||||| ||||||||||||||||| ||||||||||||    
T  12318585 tatcaatgagttcttaaagaagacatacaaaatggttacaagaaattagc-ttcaacaagctc 12318646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 16914235 - 16914281
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaa 114  Q
    ||||||||| ||||||||| ||||| |||||||||||||| ||||||    
T  16914235 actatcaatgagttctttacaaagagatacaaaagggttagaagaaa 16914281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 19752815 - 19752731
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||||| || |||   |||||||| ||||||| | ||||| |||||||  ||||||||||||||||| ||||||||||||    
T  19752815 gagagattgatctctccaatcctctatcaatgagttctt-acaaagagatacaaatcggttacaagaaattagc-ttcaacaagctc 19752731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 23555292 - 23555392
Alignment:
Q  34 acctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    ||||||| | |||||||||||| || || |||  ||||||||| ||||| ||| ||||| ||||||| | |||| |||||||||| |||||||||| |||    
T  23555292 acctactatggggagagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttataagaaattag-tttcaacaagttca 23555389  T
Q  134 caa 136  Q
    |||    
T  23555390 caa 23555392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 51765527 - 51765449
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaaggg-ttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| ||||||||||| ||||||||||||||||||    
T  51765527 ggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaaggggttacaagaaattagcttt 51765449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 1485843 - 1485880
Alignment:
Q  80 ttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  1485843 ttctttataaatagatacaaaagggttacaagaaatta 1485880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 25652194 - 25652141
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||  ||||||||| ||||| |||||| || ||||||||||||||||||    
T  25652194 actatcaaagagttctttacaaagagatacaagagagttacaagaaattagctt 25652141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 193739 - 193657
Alignment:
Q  47 agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagct 131  Q
    |||||||||||| || |||  ||||||||| |||| || | ||||| ||||||| | |||||||||||||||| |||||||||||    
T  193739 agagattgatctctccaatccactatcaatgagttatt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagct 193657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 1833652 - 1833577
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| | |||||||||| |||||||    
T  1833652 ggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaatttagctt 1833577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 4535541 - 4535589
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaatt 116  Q
    ||||||||| ||||||||| ||||| ||||||||  |||||||||||||    
T  4535541 actatcaatgagttctttacaaagagatacaaaaatgttacaagaaatt 4535589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 45644391 - 45644481
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||| |||||||| || |||  ||||||||| ||||||| | ||||| ||||||| | ||| |||||||||||||||  ||||||||||||    
T  45644391 gggagatattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttgcaagaaattagcttt-gacaagctcacaa 45644481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 50169247 - 50169337
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| |  |||  ||||||||| ||| ||| | ||||| ||||||| | |||||||||||||||||||  ||||||||||||    
T  50169247 gggagagattgatctcttcaatccactatcaatgagtactt-acaaagagatacaaatgagttacaagaaattagcttt-gacaagctcacaa 50169337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 18655530 - 18655441
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| ||||||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  18655530 ggagagattgatctctctaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 18655441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 42498324 - 42498235
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  42498324 ggagagattgatctctccaatccactatcaatgagttctt-acaaagaaatacaaaagggttacaagaaattagc-ttcaacaagttcacaa 42498235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 30143471 - 30143381
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  30143471 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 30143381  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 4283666 - 4283565
Alignment:
Q  34 acctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||| || ||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||    
T  4283666 acctactctagaggggagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctc 4283569  T
Q  133 acaa 136  Q
    ||||    
T  4283568 acaa 4283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 11712017 - 11712129
Alignment:
Q  25 ccaacaattacctactct-agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttc 123  Q
    |||||||| ||||||| | |||||||||||||||| |  |||  ||||||||| |||| |||| ||||| ||| ||||||||| |||||||||||| |||    
T  11712017 ccaacaatgacctactttgagggagagattgatctcttcaatccactatcaatgagttatttacaaagagatataaaagggtttcaagaaattagc-ttc 11712115  T
Q  124 aacaagctcacaag 137  Q
    ||||||||| ||||    
T  11712116 aacaagctctcaag 11712129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 32902210 - 32902287
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||||||||| || |||| ||||||||| | ||||||| ||||| ||||||||  ||||||||||||||||||    
T  32902210 gggagagattgatctctcaaattcactatcaatgaattctttagaaagagatacaaaaaagttacaagaaattagctt 32902287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 34254357 - 34254445
Alignment:
Q  34 acctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||| ||||    
T  34254357 acctactctagaggagagattgatctctccaatccactatcaataagttctt-acaaagagatacaaaagggttacaagaaattaacttt 34254445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 34256533 - 34256621
Alignment:
Q  34 acctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||| ||||    
T  34256533 acctactctagaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattaacttt 34256621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 1822424 - 1822333
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||| ||||| | | |||| |||| ||| | ||| |||||||||||||||||||||| ||||||||||||||||    
T  1822424 gggagagattgatctctccaattcactattagtgagttatttacaaatagatataaaagggttacaagaaattagc-ttcaacaagctcacaa 1822333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 1856869 - 1856778
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||| ||||| | | |||| |||| ||| | ||| |||||||||||||||||||||| ||||||||||||||||    
T  1856869 gggagagattgatctctccaattcactattagtgagttatttacaaatagatataaaagggttacaagaaattagc-ttcaacaagctcacaa 1856778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 5689402 - 5689312
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||||||  ||||||||||||    
T  5689402 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttt-gacaagctcacaa 5689312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 19491736 - 19491842
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    |||||| |||||||| | ||||  ||||||||  ||||||| | ||||| ||||||| ||||||||||||||||| |||||||||||||||||  | |||    
T  19491736 gggagatattgatctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattag-tttcaacaagctcacaaagaacaa 19491833  T
Q  144 acctaattt 152  Q
    |||||||||    
T  19491834 acctaattt 19491842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 40221876 - 40221786
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  40221876 gggagagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattag-tttcaacaagctcacaa 40221786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 42435029 - 42435118
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||| | || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  42435029 ggagagattgatttctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 42435118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 1292490 - 1292590
Alignment:
Q  34 acctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    ||||||||| |||||||||| || | || |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| |||||||||||||    
T  1292490 acctactctggggagagatttatttctcaaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctca 1292587  T
Q  134 caa 136  Q
    |||    
T  1292588 caa 1292590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 31218387 - 31218311
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || ||||||  ||||||||| |||||||   ||||| |||||||||||||||||||||||||||||    
T  31218387 ggagagattgaactctctaatccactatcaatgagttcttcc-aaagagatacaaaagggttacaagaaattagcttt 31218311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 33352281 - 33352174
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||  ||||||||| ||||||  | |||    
T  33352281 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattag-gttcaacaagttcacaaagaacaa 33352184  T
Q  144 acctaatttt 153  Q
     |||||||||    
T  33352183 ccctaatttt 33352174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 4731789 - 4731699
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||| ||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||  ||||||||||||||||    
T  4731789 gggagagatcgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattag-gttcaacaagctcacaa 4731699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 7597746 - 7597659
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||||||||| || |||  |||||||||   ||||||| ||||| |||||||||| ||| ||||||||||| ||||||||||||    
T  7597746 gggagagattgatctctccaatccactatcaatgcattctttacaaagagatacaaaaggattataagaaattagc-ttcaacaagctc 7597659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 12702671 - 12702761
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  | ||||||| ||||||| | ||||| | |||||||||||||||||||||||| ||||||||| ||||||    
T  12702671 gggagagattgatctctccaatccaatatcaatgagttctt-acaaagagacacaaaagggttacaagaaattagc-ttcaacaagttcacaa 12702761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 15212917 - 15212827
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  | ||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  15212917 gggagagattgatctctccaatccattatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 15212827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 18141951 - 18141861
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||  ||||||| |||||||||||||||||| ||||||||||||||||    
T  18141951 gggagagattgatctctccaatccactatcaaagagttctt-acaaagtgatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 18141861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 27811409 - 27811319
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| |  |||  |||||||||  |||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  27811409 gggagagattgatctcttcaatccactatcaatgggttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 27811319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 40328910 - 40328804
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    |||||||||||||| || |||  ||||||||| ||||| ||| ||||| |||||||| | ||||||||||||||| ||| |||||||||||||  | |||    
T  40328910 ggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgagttacaagaaattag-tttaaacaagctcacaaagaacaa 40328813  T
Q  144 acctaattt 152  Q
    |||||||||    
T  40328812 acctaattt 40328804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 44353924 - 44353834
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||||||  |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||| ||||||    
T  44353924 gggagagattgatcttttcaatccactatcaatgagttctt-acaaagagatacaaatgtgttacaagaaattagc-ttcaacaagttcacaa 44353834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 1746257 - 1746332
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| |  |||| |||||||||||||||||||||||||||||    
T  1746257 ggagagattgaactctccaatccactatcaatgagttcttca--aagagatacaaaagggttacaagaaattagcttt 1746332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 41267077 - 41267027
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    ||||||||  ||||||||| ||||||||||||||| |||||||||||||||    
T  41267077 actatcaagaagttctttagaaagaaatacaaaagagttacaagaaattag 41267027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 6599103 - 6599027
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||||||||| ||||||  ||||||||| ||||| ||| |||   ||||||| ||||||||||||||||||||    
T  6599103 gggagagattgatctctctaatccactatcaatgagttc-ttacaaaagtatacaaatgggttacaagaaattagctt 6599027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 6674556 - 6674480
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||||||||| ||||||  ||||||||| ||||| ||| |||   ||||||| ||||||||||||||||||||    
T  6674556 gggagagattgatctctctaatccactatcaatgagttc-ttacaaaagtatacaaatgggttacaagaaattagctt 6674480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 44303985 - 44303909
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| | ||||| |||||||||| ||||||||||||||||||    
T  44303985 ggagagattgaactctccaatccactatcaatgagttcttaa-aaagagatacaaaaggattacaagaaattagcttt 44303909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 10240262 - 10240195
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||| ||||||||| ||||| || ||| | ||||||||||||||||  ||||||||||||||||    
T  10240262 actatcaatgagttctttacaaagagatccaacatggttacaagaaattag-attcaacaagctcacaa 10240195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 10930236 - 10930326
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  |||||||||  |||||| | ||||| ||| ||| |||||||||||||||||| |||||| |||||||||    
T  10930236 gggagagattgatctctccaatccactatcaatgtgttctt-acaaagagatataaatgggttacaagaaattagc-ttcaacgagctcacaa 10930326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 40321211 - 40321121
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||  |||| |||| ||||| |||| || |||||||||||||||| | ||||||||||||||||    
T  40321211 gggagagattgatctctccaatccactatcaaagagtt-tttacaaagagatactaatgggttacaagaaattaac-ttcaacaagctcacaa 40321121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 43036553 - 43036464
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| |  |||||||||||||| |||||||||| ||||||    
T  43036553 ggagagattgatctctcaaatccactatcaatgagttc-ttacaaagagatacaaatgaattacaagaaattag-tttcaacaagttcacaa 43036464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 9765852 - 9765799
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  9765852 actatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttt 9765799  T

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Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 17982783 - 17982707
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| |||||||||||||||||||||||| ||||    
T  17982783 ggagagattgaactctccaatccactatcaatgagttcttcc-aaagagatacaaaagggttacaagaaattaacttt 17982707  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 30291739 - 30291648
Alignment:
Q  43 agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||||| || |||  ||||||||  | ||||| | ||||  ||||||| | |||||||||||||||| ||||||||||||||||    
T  30291739 agggagagattgatctctccaatccactatcaaagaattctt-acaaagtgatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 30291648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 40585823 - 40585739
Alignment:
Q  67 tactatcaattagttcttt-ataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaacctaatt 151  Q
    |||||||||| |||||||| | ||| | |||||||||| |||||| ||||| | |||||||||||||||||| || |||| |||||    
T  40585823 tactatcaatgagttcttttacaaaaagatacaaaaggcttacaaaaaattcg-tttcaacaagctcacaagaataaaacttaatt 40585739  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 3303707 - 3303797
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| |  |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||  || |||||||||||||    
T  3303707 gggagagattgatctcttcaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattag-gttaaacaagctcacaa 3303797  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 8153900 - 8153813
Alignment:
Q  34 acctactct-agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||| ||| |||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||||| |||||| ||| |||||||    
T  8153900 acctactctgaggaagagattgatctctccaatcaactatcaatgagttc-ttacaaagatatacaaaagagttacacgaatttagctt 8153813  T

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Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 23565087 - 23565188
Alignment:
Q  34 acctactctagg-gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    |||||||||||| ||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||||| ||||||||||||||| |||||||||||||    
T  23565087 acctactctaggagagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattag-tttcaacaagctc 23565184  T
Q  133 acaa 136  Q
    ||||    
T  23565185 acaa 23565188  T

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Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 22328405 - 22328518
Alignment:
Q  23 gtccaacaattacctactctaggg-agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||||||| |||||||||||| || |||  ||||| ||| | ||| ||  ||||| ||||||||| |||||||||||||||| |    
T  22328405 gtccaacaatgacctactctaggggagagattgatctctcaaatccactattaatgacttccttgcaaagagatacaaaagagttacaagaaattagc-t 22328503  T
Q  122 tcaacaagctcacaa 136  Q
    |||||||||||||||    
T  22328504 tcaacaagctcacaa 22328518  T

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Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 36574542 - 36574643
Alignment:
Q  34 acctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    ||||||||||||||  ||||||||| || ||   ||||||||| ||||||||| ||||| ||| |||||||||||||||||||||| |||||||| ||||    
T  36574542 acctactctagggatggattgatctctccaaaccactatcaatgagttctttacaaagagatataaaagggttacaagaaattagc-ttcaacaaactca 36574640  T
Q  134 caa 136  Q
    |||    
T  36574641 caa 36574643  T

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Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 496020 - 496110
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| ||||||| ||||||| ||||| |||||||||||| ||||||||||||||||    
T  496020 gggagagattgatctctccaatccactatcaatgagttctt-ataaagagatacaaatgggttgcaagaaattagc-ttcaacaagctcacaa 496110  T

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Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 1113788 - 1113698
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || ||| |||||||||| ||||| ||| ||||| ||||||| |||||| ||||||||||| ||||||||||||||||    
T  1113788 gggagagattgatctctccaatctactatcaatgagttc-ttacaaagagatacaaatgggttataagaaattagc-ttcaacaagctcacaa 1113698  T

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Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 4253565 - 4253656
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| ||||||  | ||||||| ||||||||  ||||| ||| |||||||||||| ||||||||| ||||||||||||||||    
T  4253565 gggagagattgatctctctaatccattatcaatgagttctttccaaagagatataaaagggttacatgaaattagc-ttcaacaagctcacaa 4253656  T

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Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 117
Target Start/End: Original strand, 3904632 - 3904726
Alignment:
Q  23 gtccaacaattacctactct-agggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    |||||||||| ||||||||| |||||||||||||||| ||| ||  ||||||||| ||||||||| ||||| || |||||| ||||||||||||||    
T  3904632 gtccaacaatgacctactctgagggagagattgatctctctgatc-actatcaatgagttctttacaaagagatgcaaaagtgttacaagaaatta 3904726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 8359331 - 8359444
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagct 120  Q
    |||||||||| ||||||||| | |||||||||||||| || |||  ||||||||| ||||| ||| ||||| |||||||| ||||||||||||||||| |    
T  8359331 gtccaacaatgacctactctggaggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattag-t 8359428  T
Q  121 ttcaacaagctcacaa 136  Q
    || |||||||||||||    
T  8359429 ttaaacaagctcacaa 8359444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 22270103 - 22270014
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  22270103 ggagagattgatctctccaatccactatcaatcagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 22270014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 32358092 - 32358181
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  32358092 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 32358181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 47673980 - 47674070
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  47673980 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 47674070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 48491710 - 48491620
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||||  ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  48491710 gggagagattgatctctccaatccactatcaatgagttctttc-aaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 48491620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 6359992 - 6360077
Alignment:
Q  47 agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcac 134  Q
    |||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||    
T  6359992 agagattgatctctccaatcaactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcac 6360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 6432101 - 6432012
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||  ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  6432101 ggagagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 6432012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 19502308 - 19502219
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||||| |||||||||||||||||||  ||||||||||||    
T  19502308 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttt-gacaagctcacaa 19502219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 29991183 - 29991078
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaa 144  Q
    |||||||||||||| || |||  ||||||||| |||| || | ||||| |||||||||||||||||||||||||||||  ||||| |||||| || |||     
T  29991183 ggagagattgatctctccaatccactatcaatgagttatt-agaaagagatacaaaagggttacaagaaattagcttt-gacaagttcacaaataacaac 29991086  T
Q  145 cctaattt 152  Q
    ||||||||    
T  29991085 cctaattt 29991078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 14069870 - 14069947
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  14069870 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttt 14069947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 14379898 - 14379975
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  14379898 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttt 14379975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 43864373 - 43864285
Alignment:
Q  46 gagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||| || |||  |||||||||||||| |||| ||||| ||||||| |||||||| ||||||||| ||||||||| ||||||    
T  43864373 gagagattgatctctccaatccactatcaattagtt-tttacaaagagatacaaatgggttacaggaaattagc-ttcaacaagttcacaa 43864285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 35854044 - 35853968
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  35854044 ggagagattgaactctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 35853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 36146445 - 36146543
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| ||||||| |||||||||| |||||||||||||||| || |||    
T  36146445 gggagagattgatctctcaaatccactatcaatgagttc-ttacaaagagatacaaatgggttac-agaaattagc-ttcaacaagctcacaaataacaa 36146541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 41649048 - 41649153
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||  ||||||| ||||||||||||||||||  | |||||||||||||  | |||    
T  41649048 gggagagattgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagc--taaacaagctcacaaagaacaa 41649144  T
Q  144 acctaattt 152  Q
    |||||||||    
T  41649145 acctaattt 41649153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 2361009 - 2361099
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||| | || |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  2361009 gggagagattgatatctcaaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 2361099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 26417447 - 26417357
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||| ||||||| |||||||||||||||| | ||||||||||||||||    
T  26417447 gggagagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattatc-ttcaacaagctcacaa 26417357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 27347948 - 27347858
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| |  |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  27347948 gggagagattgatctctgcaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 27347858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 30024769 - 30024859
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||| ||||||||| || |||  ||||||||  ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  30024769 gggagtgattgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 30024859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 31733006 - 31733096
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  | ||||||| ||||||| | ||||| ||||||| |||||||||||||||||| |||| |||||||||||    
T  31733006 gggagagattgatctctccaatccagtatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaccaagctcacaa 31733096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 23555170 - 23555081
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | |||||  |||||||| |||||||||||||||| ||||||||| ||||||    
T  23555170 ggagagattgatctctccaatccactatcaatgagttctt-acaaagaggtacaaaagtgttacaagaaattagc-ttcaacaagttcacaa 23555081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 23344115 - 23344016
Alignment:
Q  34 acctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    ||||||||| |||||||||| || | || ||| || ||||||| ||||||  | ||||| |||| ||||||||||||||||||||| |||||||||||||    
T  23344115 acctactct-gggagagattaatttctccaatctattatcaatgagttctc-acaaagatatactaaagggttacaagaaattagc-ttcaacaagctca 23344019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 4508746 - 4508833
Alignment:
Q  47 agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||| || |||  ||| ||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||| ||||||||||    
T  4508746 agagattgatctctccaatccactctcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaataagctcacaa 4508833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 4510609 - 4510661
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||    
T  4510609 actatcaatgagttctt-ataaagagatacaaatgggttacaagaaattagctt 4510661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 4512451 - 4512503
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||    
T  4512451 actatcaatgagttctt-ataaagagatacaaatgggttacaagaaattagctt 4512503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 2390370 - 2390323
Alignment:
Q  88 aaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  2390370 aaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 2390323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 4178880 - 4178827
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttc 123  Q
    ||||||||| ||||||| |  |||| ||||||||||||||||||||||||||||||    
T  4178880 actatcaatgagttcttca--aagagatacaaaagggttacaagaaattagctttc 4178827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 4586292 - 4586202
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||| ||| ||||||||| |||||||| ||||||||| ||||||    
T  4586292 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagagataaaaatgggttacaaaaaattagc-ttcaacaagttcacaa 4586202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 25615983 - 25615908
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||||||| ||||||  ||||||||| ||||||| | |||   ||||||| ||||||||||||||||||||    
T  25615983 ggagagattgatctctctaatccactatcaatgagttctt-acaaaatgatacaaatgggttacaagaaattagctt 25615908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 29608844 - 29608778
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  29608844 actatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 29608778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 31105430 - 31105520
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||| |||| || |||  || |||||| ||||||| | ||| | ||||||| |||||||||||||||||| ||||||||||||||||    
T  31105430 gggagagatttatctctccaatccaccatcaatgagttctt-acaaaaagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 31105520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 41317471 - 41317561
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||  ||||||| || ||||||||||||||||||  ||||||||||||    
T  41317471 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatggattacaagaaattagcttt-gacaagctcacaa 41317561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 48599372 - 48599461
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| || ||||   ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  48599372 ggagagattgatctctccaatccactatcaatgagctcttcc-aaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 48599461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 8153473 - 8153396
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||||||| || |||  ||||||||| |||| || | ||||| ||||||| | |||||||||||||||||||    
T  8153473 gggagagattgatctctccaatccactatcaatgagttatt-acaaagagatacaaatgagttacaagaaattagcttt 8153396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 25766998 - 25767075
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaaggg-ttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| | ||||| ||||||||||| ||||||||||||||||||    
T  25766998 ggagagattgaactctccaatccactatcaatgagttcttca-aaagagatacaaaaggggttacaagaaattagcttt 25767075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 18126751 - 18126699
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||| ||||||| | ||||| ||||||| ||||||||||||||||||||    
T  18126751 actatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctt 18126699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 39731499 - 39731426
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    ||||||||||| || || |||  ||||||||| |||||||   ||||| ||||||||| |||||||||||||||    
T  39731499 ggagagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattag 39731426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 47676173 - 47676249
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||||||||| || | |  ||||||| | ||||||| | ||||| ||||||| ||||||||||||||||||||    
T  47676173 gggagagattgatctctccattccactatcattgagttctt-acaaagagatacaaatgggttacaagaaattagctt 47676249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 34310754 - 34310829
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||||||| || |||  ||||||||| ||||| ||| ||| | ||||||| | ||||||||||||||||||    
T  34310754 ggagagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaatgtgttacaagaaattagctt 34310829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 46860627 - 46860499
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||||| | ||| |||||||||| || |||  ||||||||| |||| || | ||||| ||||||| |||||||||||||||||| |    
T  46860627 gtccaacaatgacctactctggaggaaagattgatctctccaatccactatcaatgagttatt-acaaagagatacaaatgggttacaagaaattagc-t 46860530  T
Q  122 tcaacaagctcacaagtatcaaacctaattt 152  Q
    |||||||||||||||  | ||||||||||||    
T  46860529 tcaacaagctcacaaagaacaaacctaattt 46860499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 45095305 - 45095217
Alignment:
Q  34 acctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  45095305 acctactctagaggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 45095217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 33191983 - 33191877
Alignment:
Q  23 gtccaacaattacctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||| |||| |||| | ||||||||||||| ||||||  ||||||||| ||||||||| ||||| ||  |||| ||||||||||| ||||| ||    
T  33191983 gtccaacaatgacctcctctggagagagattgatctctctaatccactatcaatgagttctttacaaagacat--aaaatggttacaagaacttagc-tt 33191887  T
Q  123 caacaagctc 132  Q
    ||||||||||    
T  33191886 caacaagctc 33191877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 19683927 - 19684003
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  19683927 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 19684003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 29810999 - 29810909
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  29810999 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaa 29810909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 30236256 - 30236166
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| |||||||  ||||||||||||||||| ||||||||||||||||    
T  30236256 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagc-ttcaacaagctcacaa 30236166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 44331676 - 44331586
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| || ||||||||||||||| ||||||||||||||||    
T  44331676 gggagagattgatctctccaatccactatcaataagttctt-acaaagagatacaaatggcttacaagaaattagc-ttcaacaagctcacaa 44331586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 46173488 - 46173398
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| | ||||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  46173488 gggagagattgatctctccaatccactatcaatgaattctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagctcacaa 46173398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 7762395 - 7762306
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||||| |||||||||||||||| ||||||||| ||||||    
T  7762395 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagc-ttcaacaagttcacaa 7762306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 152
Target Start/End: Original strand, 22835040 - 22835145
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaa 144  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||  ||||||| |||||||||||||||||| || |||||||||||||  | ||||    
T  22835040 ggagagattgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagc-ttaaacaagctcacaaagaacaaa 22835137  T
Q  145 cctaattt 152  Q
    ||||||||    
T  22835138 cctaattt 22835145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 34491342 - 34491253
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  34491342 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 34491253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 54593834 - 54593745
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||||||| ||||||||| |||||||| ||||||||||||||||    
T  54593834 ggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaataaattagc-ttcaacaagctcacaa 54593745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 5433947 - 5434003
Alignment:
Q  79 gttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  5433947 gttctttacaaagagatataaaagggttacaagaaattagcttt-aacaagctcacaa 5434003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 23197977 - 23198053
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||| ||||||||| ||||||| | ||| | |||||||||||||||||||||||||||||    
T  23197977 ggagagattgaactctccaattcactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattagcttt 23198053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 23200176 - 23200252
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||| ||||||||| ||||||| | ||| | |||||||||||||||||||||||||||||    
T  23200176 ggagagattgaactctccaattcactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattagcttt 23200252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 37408588 - 37408512
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| |  |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  37408588 ggagagattgatctcttcaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 37408512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 760978 - 760888
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||  ||||||| |||||||||||||||||| || |||||||||||||    
T  760978 gggagagattgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagc-ttaaacaagctcacaa 760888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 29196423 - 29196513
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| ||||| |||||||||||||||  ||||||||||||    
T  29196423 gggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttccaagaaattagcttt-gacaagctcacaa 29196513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 39153398 - 39153504
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||| ||| || |||  ||||||||| ||||||| ||||||  ||||||| | |||||||||||||||| || |||||||||||||  | |||    
T  39153398 gggagagattgttctctccaatccactatcaatgagttctt-ataaagggatacaaatgagttacaagaaattagc-ttaaacaagctcacaatgaacaa 39153495  T
Q  144 acctaattt 152  Q
    |||||||||    
T  39153496 acctaattt 39153504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 40735514 - 40735424
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| |||||||  |||||||| |||||||| ||||||||||||||||    
T  40735514 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaactggttacaataaattagc-ttcaacaagctcacaa 40735424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 49199507 - 49199597
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||| |||| || |||  ||||||||| ||||||| | ||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  49199507 ggagagattaatctctccaatccactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagc-ttcaacaagctcacaa 49199597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 53921540 - 53921646
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| |||   ||||||| | ||||||||||||||||||| |||||||||||||  | |||    
T  53921540 gggagagattgatctctccaatccactatcaatgagttc-ttacaaaatgatacaaatgagttacaagaaattagcttt-aacaagctcacaaacaacaa 53921637  T
Q  144 acctaattt 152  Q
    |||||||||    
T  53921638 acctaattt 53921646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 2020245 - 2020194
Alignment:
Q  70 tatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||| ||||||||| |||||||||||||| ||||| |||||||||||||    
T  2020245 tatcaatgagttctttacaaagaaatacaaaacggttataagaaattagctt 2020194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 7764594 - 7764505
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||| |||| || |||  ||||||||| ||||||| | ||||| ||||||||| ||||||||||||||||||| |||||| ||||||    
T  7764594 ggagagattcatctctccaatccactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttt-aacaagttcacaa 7764505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 9581412 - 9581307
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaa 144  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||  ||||||| |||||| ||||||||||| || |||||||||||||  | ||||    
T  9581412 ggagagattgatctctccaatccactatcaatgagttctt-acaaagggatacaaatgggttaaaagaaattagc-ttaaacaagctcacaaagaacaaa 9581315  T
Q  145 cctaattt 152  Q
    ||||||||    
T  9581314 cctaattt 9581307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 35138766 - 35138904
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaacctaattt---------tctcaa 158  Q
    ||||||||| ||||||||| ||||| ||||||||| ||| |||||||||| ||| |||||| ||||| |  | ||||| ||||||         ||||||    
T  35138766 actatcaatgagttctttacaaagagatacaaaagagttgcaagaaattaactt-caacaaactcaccaagaacaaacataatttctacccatttctcaa 35138864  T
Q  159 cctcttcccataaacaagactctcaatgattttcactctc 198  Q
     ||||| |||| |||||||| |||||||||||||||||||    
T  35138865 tctctttccatgaacaagacactcaatgattttcactctc 35138904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 5236483 - 5236583
Alignment:
Q  34 acctactctagggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    ||||| ||| |||| |||||||||| || |||  | ||||||| ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| |||    
T  5236483 acctaatctggggaaagattgatctctcgaatccattatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttca 5236580  T
Q  134 caa 136  Q
    |||    
T  5236581 caa 5236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 20937762 - 20937701
Alignment:
Q  70 tatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||| ||||||||  ||||| |||||||||||||||||||||||| | ||||||||||||    
T  20937762 tatcaatgagttcttttcaaagagatacaaaagggttacaagaaattaac-ttcaacaagctc 20937701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 4570080 - 4569993
Alignment:
Q  47 agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||| ||||| ||||||||||    
T  4570080 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaataagctcacaa 4569993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 41510370 - 41510317
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||||||| |||||||| | ||||||| | ||||||||||||||||||    
T  41510370 actatcaattagttatttataaaaagatacaaacgagttacaagaaattagctt 41510317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 6095637 - 6095708
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||| ||||||||||||||||    
T  6095637 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaatta 6095708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 16499160 - 16499070
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||| ||| |||| ||||||||||||| ||||||||||| ||||    
T  16499160 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatataaatgggtaacaagaaattagc-ttcaacaagcttacaa 16499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 29682490 - 29682400
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||  ||||||| |||| ||||||||||||| || |||||||||||||    
T  29682490 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggtgacaagaaattagc-ttaaacaagctcacaa 29682400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 29813194 - 29813104
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||| ||| ||||||| | ||||| || |||| |||||||||||||||||| ||||||||| ||||||    
T  29813194 gggagagattgatctctccaatccactataaatgagttctt-acaaagagatgcaaatgggttacaagaaattagc-ttcaacaagttcacaa 29813104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 32891235 - 32891145
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||| |||| || |||  ||||||||  ||||||| | ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  32891235 gggagagatttatctctccaatccactatcaacgagttctt-acaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 32891145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 40734629 - 40734539
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||  ||||||| | |||||||||||||||  ||||||||||||||||    
T  40734629 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgtgttacaagaaattag-gttcaacaagctcacaa 40734539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 44700515 - 44700605
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||  ||||||| | ||||| |||||||  ||||||||||||||||| |||||||| |||||||    
T  44700515 gggagagattgatctctccaatccactatcaaagagttctt-acaaagagatacaaataggttacaagaaattagc-ttcaacaaactcacaa 44700605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 5258184 - 5258258
Alignment:
Q  47 agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||| || || |||  ||||||||| |||||||   ||||| |||||||||||||||||||||||||||||    
T  5258184 agagattgaactctccaatccactatcaatgagttcttcc-aaagagatacaaaagggttacaagaaattagcttt 5258258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 5260363 - 5260437
Alignment:
Q  47 agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||| || || |||  ||||||||| |||||||   ||||| |||||||||||||||||||||||||||||    
T  5260363 agagattgaactctccaatccactatcaatgagttcttcc-aaagagatacaaaagggttacaagaaattagcttt 5260437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 1313867 - 1313928
Alignment:
Q  70 tatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||| ||||||||  ||||| |||||||||| || ||||||||||||||| |||||||||    
T  1313867 tatcaatgagttcttttcaaagatatacaaaaggcttgcaagaaattagcttt-aacaagctc 1313928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 9636164 - 9636236
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    ||||||||||| || || |||  ||||||||| ||||||| | ||| | |||||||||||||||||||||||||    
T  9636164 ggagagattgaactctccaatccactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattag 9636236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 26323134 - 26323187
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    ||||||||| |||| ||||  |||| |||||||| |||||||||||||||||||    
T  26323134 actatcaatgagttttttaccaagatatacaaaaaggttacaagaaattagctt 26323187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 5373336 - 5373277
Alignment:
Q  73 caattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctca 133  Q
    |||| ||||| ||| ||||| ||| ||||||||||||| |||||||| |||||||||||||    
T  5373336 caatgagttccttacaaagagatataaaagggttacaataaattagc-ttcaacaagctca 5373277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 25491028 - 25491111
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaaacctaattt 152  Q
    ||||||||| | ||||||| ||||| ||||||||||  || ||||||| ||||| |||||||||| |||  | ||||||||||||    
T  25491028 actatcaatgatttctttacaaagagatacaaaaggagtataagaaatcagctt-caacaagctctcaaagaacaaacctaattt 25491111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 28253347 - 28253394
Alignment:
Q  88 aaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||  |||||||||||||| | ||||||||||||||||    
T  28253347 aaagaaatacaaaatcgttacaagaaattaac-ttcaacaagctcacaa 28253394  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 31314576 - 31314486
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||| |||||||| || |||  ||||||||  ||||||| | ||| | ||||||| |||||||||||||||||| ||||||||| ||||||    
T  31314576 gggagatattgatctctccaatccactatcaaagagttctt-acaaaaagatacaaatgggttacaagaaattagc-ttcaacaagatcacaa 31314486  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 41819538 - 41819636
Alignment:
Q  23 gtccaacaattacctactctag-ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaa-gggttacaagaaattagct 120  Q
    |||||||||| ||||||||| | |||||||||||| | || |||  ||||| ||| ||||||| | ||||| |||||||| |||||||||||||||||||    
T  41819538 gtccaacaatgacctactctggaggagagattgatgtctccaatccactat-aatgagttctt-acaaagagatacaaaatgggttacaagaaattagct 41819635  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 47304382 - 47304292
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| |||  |||| ||||| | ||||||||||| |||| | ||||||||||||||||    
T  47304382 gggagagattgatctctccaatccactatcaatgagttc-ttacgaagagatacagatgggttacaagatattaac-ttcaacaagctcacaa 47304292  T

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Target: scaffold0219 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 27457 - 27566
Alignment:
Q  23 gtccaacaattacctactctaggg-agagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctt 121  Q
    |||||||||| ||||||| | ||| |||||||||||| || |||  ||||||||| |||| |||| ||||| ||||||| | |||||||||||||||| |    
T  27457 gtccaacaatgacctactatgggggagagattgatctctccaatccactatcaataagttatttacaaagagatacaaatgagttacaagaaattagc-t 27555  T
Q  122 tcaacaagctc 132  Q
    |||||||||||    
T  27556 tcaacaagctc 27566  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 114732 - 114656
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    |||||||||||||| || |||  ||||||||| ||||||| | ||||| ||||||||| |||||||||||||||||||    
T  114732 ggagagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaaagcgttacaagaaattagcttt 114656  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 434663 - 434587
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||    
T  434663 ggagagattgaactctccaatccactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttt 434587  T

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Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 490381 - 490444
Alignment:
Q  68 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctc 132  Q
    ||||||||| ||| ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||    
T  490381 actatcaatgagtactttacaaagatatacaaaagagttacaagaaattagc-ttcaacaagctc 490444  T

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Target: scaffold0176 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 18042 - 18130
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    |||||||||||||| || |||  ||||||||| ||||  ||| ||||| ||||||| | |||||||||||||||| ||||||||||||||||    
T  18042 ggagagattgatctctccaatccactatcaatgagtt--ttacaaagagatacaaatgagttacaagaaattagc-ttcaacaagctcacaa 18130  T

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Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 20452 - 20558
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaagtatcaa 143  Q
    ||||||||||||||| || |||  | ||||||  ||||||| | ||||| ||||||| |||||||||||||||||| ||||||||| ||||||  | |||    
T  20452 gggagagattgatctctccaatccaatatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagc-ttcaacaagttcacaaaaaacaa 20549  T
Q  144 acctaattt 152  Q
    |||||||||    
T  20550 acctaattt 20558  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 25175 - 25112
Alignment:
Q  54 gatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaatta 117  Q
    ||||| |||| || ||||||||| ||||||||| ||||| |||||||| |||||||||||||||    
T  25175 gatctctctacttcactatcaatgagttctttacaaagagatacaaaaaggttacaagaaatta 25112  T

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Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 149134 - 149224
Alignment:
Q  44 gggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagctttcaacaagctcacaa 136  Q
    ||||||||||||||| || |||  ||||||||| ||||| ||| ||||| ||| ||| |||| ||||||||||||| ||||||||||| ||||    
T  149134 gggagagattgatctctccaatccactatcaatgagttc-ttacaaagagatataaatgggtaacaagaaattagc-ttcaacaagcttacaa 149224  T

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Target: scaffold1519 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 1004 - 970
Alignment:
Q  88 aaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||| |||||||||||||||||||||||||||||    
T  1004 aaagagatacaaaagggttacaagaaattagcttt 970  T

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Target: scaffold0491 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 8773 - 8846
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    ||||||||||| || || |||  ||||||||  |||||||   ||||| |||||||||||||||||||||||||    
T  8773 ggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaattag 8846  T

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Target: scaffold0491; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 11199 - 11272
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattag 118  Q
    ||||||||||| || || |||  ||||||||  |||||||   ||||| |||||||||||||||||||||||||    
T  11199 ggagagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaattag 11272  T

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Target: scaffold0286 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 11687 - 11611
Alignment:
Q  45 ggagagattgatctttctaatttactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttt 122  Q
    ||||||||||| || || |||  ||||||||| ||||||| | ||||| ||||||| | |||||||||||||||||||    
T  11687 ggagagattgaactctccaatccactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttt 11611  T

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