View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2566_low_43 (Length: 249)
Name: NF2566_low_43
Description: NF2566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2566_low_43 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 23314285 - 23314051
Alignment:
| Q |
1 |
tcatttttcttgaacttaatatctctcccattcagaacattaagttcaagaatagcttctttaaacttcttgagagaacagaactccatagcaatagtga |
100 |
Q |
| |
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|||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||||||||||||| ||||||||| |
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| T |
23314285 |
tcatttgtcttgagcttaatatctctcccattcagaacattaagctcaagaaaagcttctttaaattgcttgagagaacagaactccataccaatagtga |
23314186 |
T |
|
| Q |
101 |
acttaaaatccttgttcaagtcttcttccttaatccttggatatataggctttacaccttcaacattgtctacatcagaagcactatctaagtcatcagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
23314185 |
acttaaaatccttgttcaagtcttcttccttaaaccttggatatataggctttacaccttcaacattgtctacatcagaagcactatctaagtcatcagt |
23314086 |
T |
|
| Q |
201 |
tacataaccatcttcaagtccaccattgtcatcat |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
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|
| T |
23314085 |
tacataaccatcttcaagtccaccattgtcatcat |
23314051 |
T |
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