View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2566_low_45 (Length: 246)

Name: NF2566_low_45
Description: NF2566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2566_low_45
NF2566_low_45
[»] chr3 (49 HSPs)
chr3 (18-235)||(11393379-11393596)
chr3 (182-235)||(30426423-30426476)
chr3 (182-235)||(48901718-48901771)
chr3 (182-235)||(48903284-48903337)
chr3 (182-235)||(38016373-38016426)
chr3 (181-235)||(44676218-44676272)
chr3 (182-235)||(2458005-2458058)
chr3 (182-235)||(3152905-3152958)
chr3 (182-235)||(19115385-19115438)
chr3 (182-235)||(42571628-42571681)
chr3 (182-235)||(47895443-47895496)
chr3 (182-235)||(50646209-50646262)
chr3 (112-166)||(47219199-47219253)
chr3 (182-235)||(4392194-4392247)
chr3 (182-235)||(30315307-30315360)
chr3 (182-235)||(32492280-32492333)
chr3 (183-232)||(38140949-38140998)
chr3 (182-235)||(42071983-42072036)
chr3 (182-235)||(45213821-45213874)
chr3 (182-235)||(50038270-50038323)
chr3 (183-235)||(36460805-36460857)
chr3 (187-235)||(36729909-36729957)
chr3 (112-166)||(3136692-3136746)
chr3 (182-235)||(23208390-23208441)
chr3 (112-166)||(29127974-29128028)
chr3 (185-235)||(30431121-30431171)
chr3 (182-232)||(33194133-33194183)
chr3 (182-232)||(47137961-47138011)
chr3 (182-235)||(4758989-4759042)
chr3 (182-235)||(41850388-41850441)
chr3 (182-235)||(42886749-42886802)
chr3 (182-235)||(53200779-53200832)
chr3 (183-235)||(7230995-7231047)
chr3 (184-232)||(38363785-38363833)
chr3 (114-166)||(47471886-47471938)
chr3 (112-162)||(7310701-7310751)
chr3 (189-235)||(9189534-9189580)
chr3 (124-166)||(32522034-32522076)
chr3 (189-235)||(33024399-33024445)
chr3 (185-235)||(40487829-40487879)
chr3 (112-166)||(49021201-49021255)
chr3 (116-165)||(8683242-8683291)
chr3 (113-162)||(21325123-21325172)
chr3 (182-235)||(36844841-36844894)
chr3 (182-235)||(39356883-39356936)
chr3 (113-166)||(48342075-48342128)
chr3 (182-235)||(50088415-50088468)
chr3 (182-235)||(51398008-51398061)
chr3 (114-166)||(45877509-45877561)
[»] chr2 (57 HSPs)
chr2 (181-235)||(43427389-43427443)
chr2 (182-235)||(43971502-43971555)
chr2 (182-235)||(4133022-4133075)
chr2 (182-235)||(7028914-7028967)
chr2 (182-235)||(12342091-12342144)
chr2 (182-235)||(16792481-16792534)
chr2 (182-235)||(25383586-25383639)
chr2 (182-235)||(29396782-29396835)
chr2 (182-235)||(45301763-45301816)
chr2 (185-232)||(14285939-14285986)
chr2 (182-232)||(4051809-4051859)
chr2 (182-232)||(12566085-12566135)
chr2 (181-235)||(13561991-13562045)
chr2 (182-232)||(35799201-35799251)
chr2 (182-232)||(36177974-36178024)
chr2 (182-235)||(441333-441386)
chr2 (182-235)||(6220506-6220559)
chr2 (182-235)||(7042288-7042341)
chr2 (182-235)||(8540036-8540089)
chr2 (112-157)||(15234058-15234103)
chr2 (182-235)||(18579165-18579218)
chr2 (182-235)||(22620436-22620489)
chr2 (182-235)||(34546433-34546486)
chr2 (183-235)||(5717512-5717564)
chr2 (183-235)||(27964472-27964524)
chr2 (184-235)||(45423618-45423669)
chr2 (185-235)||(9391660-9391710)
chr2 (182-232)||(12394026-12394076)
chr2 (181-235)||(17703016-17703070)
chr2 (112-166)||(20116609-20116663)
chr2 (185-235)||(45082002-45082052)
chr2 (113-166)||(16325650-16325703)
chr2 (182-235)||(16807619-16807672)
chr2 (182-235)||(16846900-16846953)
chr2 (182-235)||(17695927-17695980)
chr2 (190-235)||(18719534-18719579)
chr2 (182-235)||(29808810-29808863)
chr2 (112-165)||(44548721-44548774)
chr2 (114-166)||(12864279-12864331)
chr2 (115-166)||(2784987-2785038)
chr2 (184-231)||(30855105-30855152)
chr2 (182-229)||(38926604-38926651)
chr2 (182-232)||(777768-777818)
chr2 (182-232)||(15083257-15083307)
chr2 (189-235)||(16463134-16463180)
chr2 (182-232)||(28072565-28072615)
chr2 (182-235)||(4288813-4288866)
chr2 (182-235)||(4469499-4469552)
chr2 (182-235)||(4658335-4658388)
chr2 (182-235)||(14833837-14833890)
chr2 (113-162)||(18902528-18902577)
chr2 (113-162)||(25540402-25540451)
chr2 (182-235)||(29411694-29411747)
chr2 (182-231)||(35046516-35046565)
chr2 (114-166)||(792209-792261)
chr2 (185-229)||(11188600-11188644)
chr2 (181-235)||(43480971-43481027)
[»] chr1 (59 HSPs)
chr1 (181-235)||(50249307-50249361)
chr1 (182-235)||(29567894-29567947)
chr1 (182-235)||(32807038-32807091)
chr1 (182-235)||(38531397-38531450)
chr1 (181-235)||(9915440-9915494)
chr1 (181-235)||(15823031-15823085)
chr1 (182-232)||(46045971-46046021)
chr1 (182-235)||(5463573-5463626)
chr1 (182-235)||(31798587-31798640)
chr1 (182-235)||(34032180-34032233)
chr1 (182-235)||(34047335-34047388)
chr1 (187-235)||(50094232-50094280)
chr1 (182-233)||(48025356-48025407)
chr1 (181-235)||(12591182-12591236)
chr1 (182-232)||(15573605-15573655)
chr1 (181-235)||(26352181-26352235)
chr1 (182-235)||(16757294-16757347)
chr1 (182-235)||(24483386-24483439)
chr1 (182-235)||(26755218-26755271)
chr1 (182-235)||(44258607-44258660)
chr1 (182-235)||(49468811-49468864)
chr1 (114-166)||(8905163-8905215)
chr1 (184-232)||(46271420-46271468)
chr1 (183-235)||(49402971-49403023)
chr1 (182-238)||(52125233-52125289)
chr1 (189-232)||(14373516-14373559)
chr1 (182-232)||(1740744-1740794)
chr1 (185-235)||(10842781-10842831)
chr1 (189-235)||(25487093-25487139)
chr1 (182-232)||(27208987-27209037)
chr1 (181-235)||(44557144-44557198)
chr1 (182-235)||(12484728-12484781)
chr1 (190-235)||(14593420-14593465)
chr1 (182-235)||(35848033-35848086)
chr1 (186-235)||(40717396-40717445)
chr1 (182-235)||(44108597-44108650)
chr1 (182-235)||(52024334-52024387)
chr1 (114-166)||(5504087-5504139)
chr1 (183-235)||(26595169-26595221)
chr1 (182-230)||(30292938-30292986)
chr1 (183-235)||(39125647-39125699)
chr1 (192-235)||(34110535-34110578)
chr1 (112-166)||(1764195-1764249)
chr1 (124-166)||(14254278-14254320)
chr1 (112-166)||(26325868-26325922)
chr1 (112-166)||(34697391-34697445)
chr1 (182-232)||(46554796-46554846)
chr1 (113-166)||(9659178-9659231)
chr1 (113-166)||(10422844-10422897)
chr1 (182-235)||(13408365-13408418)
chr1 (182-235)||(18794642-18794694)
chr1 (186-235)||(24611620-24611669)
chr1 (190-235)||(25151821-25151866)
chr1 (182-235)||(31491870-31491923)
chr1 (113-166)||(32142845-32142898)
chr1 (182-235)||(48009008-48009061)
chr1 (113-166)||(51437513-51437566)
chr1 (114-166)||(31576547-31576599)
chr1 (113-165)||(46929737-46929789)
[»] scaffold0565 (1 HSPs)
scaffold0565 (182-235)||(9743-9796)
[»] scaffold0182 (1 HSPs)
scaffold0182 (186-235)||(18356-18405)
[»] scaffold0110 (1 HSPs)
scaffold0110 (182-235)||(24842-24895)
[»] chr8 (38 HSPs)
chr8 (182-235)||(15160548-15160601)
chr8 (182-235)||(39463257-39463310)
chr8 (182-235)||(39698768-39698821)
chr8 (113-166)||(43027364-43027417)
chr8 (185-235)||(35356308-35356358)
chr8 (182-235)||(4989476-4989529)
chr8 (182-235)||(6374412-6374465)
chr8 (182-235)||(39765961-39766014)
chr8 (182-235)||(40228572-40228625)
chr8 (182-232)||(43448714-43448764)
chr8 (185-235)||(43974893-43974943)
chr8 (182-235)||(7839456-7839509)
chr8 (113-166)||(8997542-8997595)
chr8 (182-235)||(17920954-17921007)
chr8 (182-235)||(29025848-29025901)
chr8 (182-235)||(40362433-40362486)
chr8 (182-237)||(43724379-43724434)
chr8 (182-232)||(9812171-9812221)
chr8 (112-166)||(26570983-26571037)
chr8 (189-227)||(29312303-29312341)
chr8 (181-235)||(31693723-31693777)
chr8 (189-235)||(43084729-43084775)
chr8 (181-235)||(45358996-45359050)
chr8 (182-235)||(9304735-9304788)
chr8 (182-235)||(9880603-9880656)
chr8 (182-235)||(37559635-37559688)
chr8 (113-165)||(39969913-39969965)
chr8 (182-235)||(396315-396369)
chr8 (112-166)||(10927665-10927719)
chr8 (189-235)||(13496240-13496286)
chr8 (181-235)||(19438233-19438287)
chr8 (182-232)||(44713532-44713582)
chr8 (182-235)||(4760660-4760713)
chr8 (182-235)||(6116107-6116160)
chr8 (182-219)||(32414725-32414762)
chr8 (113-166)||(45521227-45521280)
chr8 (187-235)||(5295508-5295556)
chr8 (113-165)||(9859993-9860045)
[»] chr7 (54 HSPs)
chr7 (182-235)||(22297994-22298047)
chr7 (182-235)||(24680126-24680179)
chr7 (182-235)||(45948730-45948783)
chr7 (181-235)||(715963-716017)
chr7 (181-235)||(34274791-34274845)
chr7 (182-235)||(1741989-1742042)
chr7 (182-235)||(12977786-12977839)
chr7 (182-235)||(42285906-42285959)
chr7 (181-233)||(18270574-18270626)
chr7 (184-232)||(40927163-40927211)
chr7 (182-233)||(18292333-18292384)
chr7 (186-233)||(21752213-21752260)
chr7 (182-235)||(2297036-2297089)
chr7 (182-235)||(13405227-13405280)
chr7 (182-235)||(23935420-23935473)
chr7 (186-235)||(37502321-37502370)
chr7 (182-235)||(42880034-42880087)
chr7 (183-235)||(10599212-10599264)
chr7 (187-235)||(48684726-48684774)
chr7 (189-235)||(10476141-10476187)
chr7 (112-162)||(17748379-17748429)
chr7 (182-232)||(24780409-24780459)
chr7 (182-232)||(27935765-27935815)
chr7 (189-235)||(27947601-27947647)
chr7 (181-235)||(31418613-31418667)
chr7 (182-231)||(6747225-6747274)
chr7 (182-235)||(8603973-8604026)
chr7 (182-235)||(19105101-19105154)
chr7 (190-235)||(29531035-29531080)
chr7 (182-235)||(37490782-37490835)
chr7 (181-234)||(48843549-48843602)
chr7 (190-230)||(44453141-44453181)
chr7 (112-164)||(48551917-48551969)
chr7 (182-221)||(16565214-16565253)
chr7 (182-221)||(16600409-16600448)
chr7 (196-235)||(25440884-25440923)
chr7 (182-232)||(1031153-1031203)
chr7 (112-166)||(22974025-22974079)
chr7 (182-232)||(35777817-35777867)
chr7 (189-235)||(40753528-40753574)
chr7 (120-166)||(41267929-41267975)
chr7 (181-227)||(42753705-42753751)
chr7 (181-235)||(44567141-44567195)
chr7 (112-161)||(5069812-5069861)
chr7 (113-162)||(8734684-8734733)
chr7 (182-235)||(24133230-24133283)
chr7 (182-235)||(33939834-33939887)
chr7 (182-235)||(37815722-37815775)
chr7 (182-235)||(41137726-41137779)
chr7 (113-166)||(42032154-42032207)
chr7 (182-235)||(45499927-45499980)
chr7 (113-166)||(48804741-48804794)
chr7 (114-166)||(38578866-38578918)
chr7 (182-230)||(40339457-40339505)
[»] chr6 (27 HSPs)
chr6 (186-235)||(19674982-19675031)
chr6 (182-235)||(234032-234085)
chr6 (182-235)||(4850597-4850650)
chr6 (183-232)||(13503953-13504002)
chr6 (182-231)||(23259431-23259480)
chr6 (182-235)||(29399944-29399997)
chr6 (186-235)||(29713508-29713557)
chr6 (113-166)||(34954617-34954670)
chr6 (182-232)||(31443551-31443601)
chr6 (182-235)||(18737192-18737245)
chr6 (182-235)||(24163816-24163869)
chr6 (182-225)||(17552357-17552400)
chr6 (182-232)||(12063615-12063665)
chr6 (182-235)||(32429282-32429335)
chr6 (114-166)||(8938770-8938822)
chr6 (186-225)||(12322996-12323035)
chr6 (112-166)||(6606094-6606148)
chr6 (182-232)||(10540613-10540663)
chr6 (112-166)||(14783417-14783471)
chr6 (181-235)||(21272204-21272258)
chr6 (113-162)||(3601147-3601196)
chr6 (182-231)||(9940646-9940695)
chr6 (113-166)||(13036002-13036055)
chr6 (183-235)||(1502841-1502893)
chr6 (112-156)||(5029886-5029930)
chr6 (189-237)||(12588531-12588579)
chr6 (203-235)||(34513705-34513737)
[»] chr5 (42 HSPs)
chr5 (182-235)||(7317026-7317079)
chr5 (182-235)||(10345034-10345087)
chr5 (182-235)||(42104165-42104218)
chr5 (185-235)||(14620596-14620646)
chr5 (181-235)||(21319412-21319466)
chr5 (181-235)||(39566180-39566234)
chr5 (185-235)||(39729960-39730010)
chr5 (182-235)||(2729888-2729941)
chr5 (182-235)||(3025033-3025086)
chr5 (189-235)||(27797786-27797832)
chr5 (189-235)||(36164892-36164938)
chr5 (182-235)||(6518974-6519027)
chr5 (183-232)||(15167115-15167164)
chr5 (182-235)||(24280991-24281044)
chr5 (182-235)||(24381168-24381221)
chr5 (182-235)||(34446129-34446182)
chr5 (189-235)||(3306111-3306157)
chr5 (114-164)||(27648424-27648474)
chr5 (182-235)||(39504720-39504774)
chr5 (112-166)||(42086383-42086437)
chr5 (182-232)||(43584482-43584532)
chr5 (113-162)||(8513579-8513628)
chr5 (182-235)||(13761555-13761608)
chr5 (182-235)||(25362902-25362955)
chr5 (182-235)||(26660753-26660806)
chr5 (182-235)||(26932346-26932399)
chr5 (186-235)||(35766002-35766051)
chr5 (182-235)||(36073732-36073785)
chr5 (183-231)||(38362243-38362291)
chr5 (182-232)||(34208999-34209052)
chr5 (112-166)||(9805060-9805114)
chr5 (185-235)||(21195380-21195430)
chr5 (112-166)||(21375407-21375461)
chr5 (112-162)||(23247349-23247398)
chr5 (182-235)||(4911252-4911305)
chr5 (182-235)||(7579971-7580024)
chr5 (182-235)||(9066525-9066578)
chr5 (186-235)||(11977590-11977639)
chr5 (112-164)||(5731917-5731969)
chr5 (203-235)||(14005911-14005943)
chr5 (114-166)||(25950593-25950645)
chr5 (203-235)||(27600418-27600450)
[»] chr4 (55 HSPs)
chr4 (186-235)||(2728504-2728553)
chr4 (182-235)||(4505335-4505388)
chr4 (182-235)||(10573260-10573313)
chr4 (182-235)||(19451317-19451370)
chr4 (182-235)||(19930712-19930765)
chr4 (182-235)||(52957896-52957949)
chr4 (185-235)||(7906102-7906152)
chr4 (181-235)||(24940876-24940930)
chr4 (182-235)||(1819560-1819613)
chr4 (182-235)||(19878646-19878699)
chr4 (182-235)||(37624554-37624607)
chr4 (182-235)||(40345453-40345506)
chr4 (182-235)||(52253843-52253896)
chr4 (182-235)||(52915648-52915701)
chr4 (187-235)||(39982106-39982154)
chr4 (182-232)||(40837128-40837178)
chr4 (113-166)||(16450360-16450413)
chr4 (182-235)||(20448037-20448090)
chr4 (182-235)||(22220465-22220518)
chr4 (182-235)||(25231173-25231226)
chr4 (182-235)||(30261257-30261310)
chr4 (182-235)||(41920415-41920468)
chr4 (182-235)||(51733600-51733653)
chr4 (113-165)||(52950143-52950195)
chr4 (119-166)||(46108751-46108798)
chr4 (189-235)||(21864489-21864535)
chr4 (189-235)||(21920350-21920396)
chr4 (182-232)||(29519634-29519684)
chr4 (182-232)||(49089462-49089512)
chr4 (182-235)||(2493100-2493153)
chr4 (191-236)||(36558407-36558452)
chr4 (182-235)||(44571971-44572024)
chr4 (182-235)||(45043694-45043747)
chr4 (182-235)||(47817736-47817789)
chr4 (182-235)||(52848160-52848213)
chr4 (182-229)||(27943658-27943705)
chr4 (115-166)||(40780861-40780912)
chr4 (124-166)||(20421833-20421875)
chr4 (112-158)||(25406560-25406606)
chr4 (182-232)||(34413656-34413706)
chr4 (182-232)||(49080586-49080635)
chr4 (182-235)||(50203074-50203125)
chr4 (182-235)||(24157183-24157236)
chr4 (112-165)||(36145212-36145265)
chr4 (182-235)||(37654408-37654460)
chr4 (113-166)||(38841366-38841419)
chr4 (182-235)||(41496203-41496256)
chr4 (182-235)||(50623081-50623134)
chr4 (182-235)||(54042289-54042342)
chr4 (114-166)||(7246645-7246697)
chr4 (182-226)||(28734596-28734640)
chr4 (182-226)||(33033076-33033120)
chr4 (114-162)||(43458677-43458725)
chr4 (187-235)||(50621293-50621341)
chr4 (183-235)||(56460082-56460134)
[»] scaffold0332 (1 HSPs)
scaffold0332 (181-235)||(3912-3966)
[»] scaffold0048 (1 HSPs)
scaffold0048 (182-235)||(62631-62684)
[»] scaffold0294 (1 HSPs)
scaffold0294 (185-235)||(3606-3656)
[»] scaffold0078 (1 HSPs)
scaffold0078 (182-235)||(1515-1568)
[»] scaffold2107 (1 HSPs)
scaffold2107 (189-235)||(615-661)
[»] scaffold0011 (1 HSPs)
scaffold0011 (114-162)||(224379-224427)
[»] scaffold0502 (1 HSPs)
scaffold0502 (189-235)||(673-719)
[»] scaffold0983 (1 HSPs)
scaffold0983 (182-235)||(788-841)


Alignment Details
Target: chr3 (Bit Score: 108; Significance: 2e-54; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 11393379 - 11393596
Alignment:
Q  18 atatactacgttagtagtttgaacttccaaatattcgaacctttacggttatttttggcagtcaaacgggtgcctatttannnnnnnnnnnnnn-ggctt 116  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||               || ||    
T  11393379 atatactacgttagtagtttaaacttccaa-tattcgaacctttacggttatctttggcagtcaaacgggtgcctatttatttttagttttttatggttt 11393477  T
Q  117 tcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgctttaagcnnnnnnntttgtttcaaaatgaatgtcattttcagtttccgat 216  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||       ||||||| ||||||||||||||||||| ||||| ||    
T  11393478 tcgcatcggtttccgaccaatcaaaggtggacgactaatctggctcatgttttaagcacaaaaatttgttttaaaatgaatgtcattttcaatttccaat 11393577  T
Q  217 gcaataataactttttctt 235  Q
    |||||||||||||||||||    
T  11393578 gcaataataactttttctt 11393596  T

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Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 30426476 - 30426423
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 30426423  T

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Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 48901718 - 48901771
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48901771  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 48903284 - 48903337
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48903337  T

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Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 38016373 - 38016426
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  38016373 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 38016426  T

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Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 44676218 - 44676272
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  44676218 tttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttctt 44676272  T

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Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 2458005 - 2458058
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctt 2458058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 3152958 - 3152905
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  3152958 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3152905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 19115385 - 19115438
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  19115385 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 19115438  T

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Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 42571681 - 42571628
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| || |||||||| |||||||||||||||||||||    
T  42571681 ttgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttctt 42571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 47895496 - 47895443
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 47895443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 50646262 - 50646209
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  50646262 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 50646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 47219253 - 47219199
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||    
T  47219253 ggctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgc 47219199  T

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Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 4392194 - 4392247
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| ||  |||||||||||||||||    
T  4392194 ttgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttctt 4392247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 30315307 - 30315360
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| |||| |||||| |||||| ||||||||||||||    
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttctt 30315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 32492333 - 32492280
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| ||| | |||||||||||||||||||||    
T  32492333 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 32492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 38140949 - 38140998
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacctttt 38140998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 42071983 - 42072036
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| |||||| |||||||||| ||||||| |||||||||||||||||||||    
T  42071983 ttgttttaaaatggatgtcatttttagtttccaatgcaataataactttttctt 42072036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 45213874 - 45213821
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||||  |||||||||||||||||||||    
T  45213874 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttctt 45213821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 50038323 - 50038270
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||| | |||||||||||||||||||||    
T  50038323 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 50038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 36460805 - 36460857
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 36460857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 36729957 - 36729909
Alignment:
Q  187 tcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  36729957 tcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 36729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 3136692 - 3136746
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||| | |||||||    
T  3136692 ggctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgc 3136746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 23208441 - 23208390
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |  ||||||||||||||||||    
T  23208441 ttgtttcaaaatgaatgtcactttcagtttccaa--caataataactttttctt 23208390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 29128028 - 29127974
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||||||||||||||| | ||||| ||| ||||||||| |||||||||    
T  29128028 ggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgc 29127974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 30431121 - 30431171
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  30431121 tttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 30431171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 33194183 - 33194133
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| ||||||||||||| ||||||||||| ||||||| ||||||||||    
T  33194183 ttgttttaaaatgaatgtcactttcagtttccaatgcaatgataacttttt 33194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 47137961 - 47138011
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| ||||||||||||||||| ||||| | ||||||||||||||||||    
T  47137961 ttgttttaaaatgaatgtcatttttagttttcaatgcaataataacttttt 47138011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 4758989 - 4759042
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||| ||||||| ||||| ||||| |||||||||||||||||||||    
T  4758989 ttgttttaaaataaatgtcactttcactttccaatgcaataataactttttctt 4759042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 41850388 - 41850441
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| |||||||||| || ||| ||||||| |||||||||||||||||||||    
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttctt 41850441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 42886749 - 42886802
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||| | ||| | ||||| |||||||||||||||||||||    
T  42886749 ttgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttctt 42886802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 53200832 - 53200779
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||| ||||| | |||||||||||||||||||||    
T  53200832 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 53200779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 7231047 - 7230995
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||| ||| |||| |  |||||||||||||||||||||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttctt 7230995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 38363785 - 38363833
Alignment:
Q  184 gtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||| ||||||||| | ||||||||||||| ||||    
T  38363785 gtttcaaaatgaatgtcactttcagtttacaatgcaataataacctttt 38363833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 47471938 - 47471886
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||||||||||||| | ||||| ||||||||||||  |||||||||    
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgc 47471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 7310701 - 7310751
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    ||||||||||||||||||||||| | ||||||||  ||||||||| |||||    
T  7310701 ggctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctc 7310751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 9189580 - 9189534
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  9189580 aaaatgaatgtcactttcagttttcaatgaaataataactttttctt 9189534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 32522076 - 32522034
Alignment:
Q  124 ggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||    
T  32522076 ggtttccgacccatcaaaggtggacgactaatctgactcatgc 32522034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 33024445 - 33024399
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| | ||||||||||| |||||||||||||||| ||||    
T  33024445 aaaatgaatgttactttcagtttccaatgcaataataactttatctt 33024399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 40487829 - 40487879
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||| |||   ||||| |||||||||||||||||||||    
T  40487829 tttcaaaatgaatgtcacttttgatttccaatgcaataataactttttctt 40487879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 49021201 - 49021255
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| |||||||||||| | ||| | ||||||||||||| |||||||||    
T  49021201 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgc 49021255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 8683242 - 8683291
Alignment:
Q  116 ttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatg 165  Q
    ||||||| ||||||||||| | ||||| ||||||||||||| ||||||||    
T  8683242 ttcgcataggtttccgacccaccaaaggtggacgactaatccggctcatg 8683291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 21325172 - 21325123
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    ||||||||| |||||||||||| ||||||||||| ||| ||||| |||||    
T  21325172 gctttcgcaccggtttccgacccatcaaagatgggcgattaatccggctc 21325123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 36844894 - 36844841
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||  ||||||| ||||||||| | |||||||||||| ||||||||    
T  36844894 ttgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttctt 36844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 39356883 - 39356936
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||| ||||||| ||||||||| | ||||||||||||| |||||||    
T  39356883 ttgttttaaaataaatgtcactttcagttttcaatgcaataataacattttctt 39356936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 48342128 - 48342075
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| | |||||||| | | |||||||||||||||||||||| ||||||    
T  48342128 gctttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgc 48342075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 50088468 - 50088415
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| |||||||| |||| ||| ||||||| |||||||| ||||||||||||    
T  50088468 ttgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttctt 50088415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 51398008 - 51398061
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||| ||| ||||| | ||| |||||||||||||||||    
T  51398008 ttgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttctt 51398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 45877561 - 45877509
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||| |||||||||||| ||||| | || |||||||||| |||||||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgc 45877509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 43427443 - 43427389
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  43427443 tttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43427389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 43971502 - 43971555
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43971555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 4133022 - 4133075
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  4133022 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 4133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7028967 - 7028914
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  7028967 ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttctt 7028914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 12342091 - 12342144
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  12342091 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 12342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 16792481 - 16792534
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  16792481 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 16792534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 25383639 - 25383586
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  25383639 ttgttttaaaatgaatgttattttcagtttccaatgcaataataactttttctt 25383586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 29396835 - 29396782
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  29396835 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 29396782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 45301763 - 45301816
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45301816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 14285939 - 14285986
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||    
T  14285939 tttcaaaatgaatgtcattttcagtttccaatacaataataacttttt 14285986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 4051859 - 4051809
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 4051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 12566135 - 12566085
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 12566085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 13561991 - 13562045
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||| ||||||||||  |||||||||||||||||||||    
T  13561991 tttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttctt 13562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 35799201 - 35799251
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataacttttt 35799251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 36177974 - 36178024
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  36177974 ttgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttt 36178024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 441386 - 441333
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| |||| |||| | |||||||||||||||||||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttctt 441333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 6220559 - 6220506
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  6220559 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 6220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7042341 - 7042288
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||| || || |||||||||| ||||||||||    
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctt 7042288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 8540036 - 8540089
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  8540036 ttgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctt 8540089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 15234058 - 15234103
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatct 157  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||    
T  15234058 ggctttcgcatcggtttccgacctatcaaagatgaacgactaatct 15234103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 18579165 - 18579218
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 18579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 22620489 - 22620436
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||| ||||  ||||||||||| |||||||||||||||||||||    
T  22620489 ttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttctt 22620436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 34546486 - 34546433
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||    
T  34546486 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 34546433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 5717512 - 5717564
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 5717564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 27964524 - 27964472
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| |||||||||||| ||| ||||||| |||||||||||||||||||||    
T  27964524 tgtttcgaaatgaatgtcacttttagtttccaatgcaataataactttttctt 27964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 45423618 - 45423669
Alignment:
Q  184 gtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||| ||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  45423618 gttttaaaatgattgttattttcagtttccaatgcaataataactttttctt 45423669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 9391710 - 9391660
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||||   |||||||||||| ||||||||    
T  9391710 tttcaaaatgaatgtcattttcagtttttaatgcaataataattttttctt 9391660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 12394076 - 12394026
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||| | ||||||||||  ||||||||||||||||||    
T  12394076 ttgtttcaaaatgaatgttactttcagtttctaatgcaataataacttttt 12394026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 17703016 - 17703070
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||||||||| ||||| ||| | |||||||||||||||||||||    
T  17703016 tttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 17703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 20116609 - 20116663
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| |||||||||||| ||||||| |||||| |||||| |||||||||    
T  20116609 ggctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgc 20116663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 45082052 - 45082002
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||| ||||||||||| ||||||||||| |||||||||||| ||||||||    
T  45082052 tttcacaatgaatgtcactttcagtttccaatgcaataataattttttctt 45082002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 16325703 - 16325650
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| |||||||||||| | ||| | |||||||||||||||||||||||    
T  16325703 gctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgc 16325650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 16807672 - 16807619
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||| ||| ||||||| |||||||||||| ||||||||    
T  16807672 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16807619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 16846953 - 16846900
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||| ||| ||||||| |||||||||||| ||||||||    
T  16846953 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16846900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 17695980 - 17695927
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||| ||||| ||||||||||| |||  ||||||||||||||||    
T  17695980 ttgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttctt 17695927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 18719579 - 18719534
Alignment:
Q  190 aaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||||| | |||||||||||||||||||||    
T  18719579 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 18719534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 29808810 - 29808863
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||| | ||||||| |||||||||||||    
T  29808810 ttgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttctt 29808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 44548721 - 44548774
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatg 165  Q
    |||||||||| | |||||||| | ||||||| ||||||||||||||||||||||    
T  44548721 ggctttcgcaccagtttccgatccatcaaaggtggacgactaatctggctcatg 44548774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 12864331 - 12864279
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||| |||||||||||| | ||| | |||||||||||||||||||||||    
T  12864331 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgc 12864279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 2785038 - 2784987
Alignment:
Q  115 tttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||| |||||||||||  ||||| ||||||||||||||||| |||||||    
T  2785038 tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgc 2784987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 30855105 - 30855152
Alignment:
Q  184 gtttcaaaatgaatgtcattttcagtttccgatgcaataataactttt 231  Q
    |||||||||||||||||| | ||||||||| |||||||||||| ||||    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataattttt 30855152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 38926604 - 38926651
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactt 229  Q
    |||||| ||||||||||||| ||||||||| | |||||||||||||||    
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 38926651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 777768 - 777818
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| ||||||||||||||||||| ||||  ||||||||||||| ||||    
T  777768 ttgttttaaaatgaatgtcattttcaatttctaatgcaataataacctttt 777818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 15083307 - 15083257
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    ||||||| ||| |||||| ||||||||||||| ||||||||||||| ||||    
T  15083307 ttgtttcgaaaagaatgttattttcagtttccaatgcaataataacatttt 15083257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 16463180 - 16463134
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||| ||||||| ||||||||| | |||||||||||||||||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttctt 16463134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 28072565 - 28072615
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| ||||||||||||| ||||||||| | || |||||||||||||||    
T  28072565 ttgttttaaaatgaatgtcactttcagttttcaatacaataataacttttt 28072615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 4288866 - 4288813
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||| ||| || |||||||  |||||||||||| ||||||||    
T  4288866 ttgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttctt 4288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 4469499 - 4469552
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||| ||| ||||||||| | || ||||||||||||||||||    
T  4469499 ttgttttaaaatgaatttcactttcagttttcaatacaataataactttttctt 4469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 4658388 - 4658335
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||| |||||| ||| | ||| |||||||| ||||||||    
T  4658388 ttgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttctt 4658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 14833890 - 14833837
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||| ||| | |||||| ||||||||||||||    
T  14833890 ttgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 18902528 - 18902577
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    ||||||||| |||||||||||| | ||||| ||| |||||||||||||||    
T  18902528 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctc 18902577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 25540402 - 25540451
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    ||||||||| |||||||||||| | ||||| ||||||||||||| |||||    
T  25540402 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctc 25540451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 29411694 - 29411747
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||| ||||| | ||||||||||||| |||||||    
T  29411694 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctt 29411747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 35046516 - 35046565
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttt 231  Q
    |||||| || |||||||||| ||||| ||||| |||||||||||||||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataactttt 35046565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 792261 - 792209
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||| ||| |||||||||||| | ||||||||| ||||||||| |||||||||    
T  792261 cttttgcaccggtttccgacccaccaaagatgggcgactaatccggctcatgc 792209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 11188644 - 11188600
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactt 229  Q
    ||||||||||||||||| ||||||||| | |||||| ||||||||    
T  11188644 tttcaaaatgaatgtcactttcagttttcaatgcaacaataactt 11188600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 43481027 - 43480971
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagt-ttccgatgca-ataataactttttctt 235  Q
    ||||||||||||||| ||||||||||||| || | ||||| ||||||||||||||||    
T  43481027 tttgtttcaaaatgactgtcattttcagtgtttcaatgcatataataactttttctt 43480971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 50249307 - 50249361
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  50249307 tttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 29567894 - 29567947
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  29567894 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 29567947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 32807091 - 32807038
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  32807091 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 32807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 38531450 - 38531397
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  38531450 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 38531397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 9915440 - 9915494
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  9915440 tttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttctt 9915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 15823031 - 15823085
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  15823031 tttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15823085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 46045971 - 46046021
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  46045971 ttgtttcaaaatgaatgtcactttcagttttcgatgcaataataacttttt 46046021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 5463573 - 5463626
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  5463573 ttgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttctt 5463626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 31798587 - 31798640
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttctt 31798640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 34032233 - 34032180
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  34032233 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 34032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 34047388 - 34047335
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  34047388 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 34047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 50094232 - 50094280
Alignment:
Q  187 tcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  50094232 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 48025407 - 48025356
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttc 233  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||    
T  48025407 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttc 48025356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 12591236 - 12591182
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  12591236 tttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 12591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 15573605 - 15573655
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15573605 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 26352235 - 26352181
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||    
T  26352235 tttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 26352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 16757347 - 16757294
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||| |||||    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattctt 16757294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 24483386 - 24483439
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| || ||||||||||| ||||||    
T  24483386 ttgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttctt 24483439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 26755218 - 26755271
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| || || |||||||||||||||    
T  26755218 ttgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttctt 26755271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 44258660 - 44258607
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 44258607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 49468864 - 49468811
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||| | ||||||||||| ||||||||||||| |||||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttctt 49468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 8905163 - 8905215
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||| |||||||||||||||||||| ||| ||| |||||||||||||||    
T  8905163 ctttcgcaccggtttccgaccaatcaaaggtggtcgattaatctggctcatgc 8905215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 46271468 - 46271420
Alignment:
Q  184 gtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataatttttt 46271420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 49403023 - 49402971
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| ||| || |||||||||||| |||||||||||||||||||||    
T  49403023 tgtttcaaaataaatatcgttttcagtttccaatgcaataataactttttctt 49402971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 52125289 - 52125233
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttcttctc 238  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||| ||||| |||||    
T  52125289 ttgtttcgaaatgaatgtcaatttcagtttccaatgcaataataattttttattctc 52125233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 14373559 - 14373516
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  14373559 aaaatgaatgtcattttcagtttccaatgcaacaataacttttt 14373516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 1740794 - 1740744
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataacttttt 1740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 10842781 - 10842831
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||| ||||||||| | ||||||||||||| |||||||    
T  10842781 tttcaaaatgaatgtcactttcagttttcaatgcaataataacattttctt 10842831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 25487093 - 25487139
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||||    
T  25487093 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 25487139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 27208987 - 27209037
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    ||||||| |||||||||||| |||| |||||| ||||||||||||||||||    
T  27208987 ttgtttcgaaatgaatgtcactttcggtttccaatgcaataataacttttt 27209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 44557198 - 44557144
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||||||||| ||||||| ||| ||||||||||||| |||||||    
T  44557198 tttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttctt 44557144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 12484781 - 12484728
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||| ||||||||| || || || ||||||||||||||||||    
T  12484781 ttgtttcaaaatgaatttcattttcatttgccaatacaataataactttttctt 12484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 14593465 - 14593420
Alignment:
Q  190 aaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttctt 14593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 35848086 - 35848033
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||| ||||||||| ||||||||| | |||||||||||||||||||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttctt 35848033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 40717445 - 40717396
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  40717445 ttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 40717396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 44108597 - 44108650
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||| ||||||| ||||||||||| || ||||||||||||||||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttctt 44108650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 52024387 - 52024334
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||| ||||||||||| | |||||||||||| ||||||||    
T  52024387 ttgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttctt 52024334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 5504139 - 5504087
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||| | |||||||||||| ||||||| ||||||||||||| |||||||||    
T  5504139 ctttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgc 5504087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 26595221 - 26595169
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||| ||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttctt 26595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 30292938 - 30292986
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttt 230  Q
    |||||| |||||||||| || ||||||||||| ||||||||||||||||    
T  30292938 ttgttttaaaatgaatgccactttcagtttccaatgcaataataacttt 30292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 39125647 - 39125699
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||||| ||||| | |||||||||||| ||||||||    
T  39125647 tgtttcaaaatgactgtcattttaagttttcaatgcaataataaatttttctt 39125699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 34110535 - 34110578
Alignment:
Q  192 atgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||| | ||||||||||| |||||||||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctt 34110578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 1764195 - 1764249
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||||| |||||||||| ||||||| ||| ||||||||| | |||||||    
T  1764195 ggctttcgcatcagtttccgacctatcaaaggtgggcgactaatccgcctcatgc 1764249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 14254278 - 14254320
Alignment:
Q  124 ggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||    
T  14254278 ggtttccgacccatcaaaggtggacgactaatccggctcatgc 14254320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 26325922 - 26325868
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| |||||||||||| | ||| | ||||||||||||| |||||||||    
T  26325922 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgc 26325868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 34697445 - 34697391
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||||||||||| ||| ||||||  ||| ||||||||| |||||||||    
T  34697445 ggctttcgcatcggtttccaacccatcaaaagtgggcgactaatccggctcatgc 34697391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 46554796 - 46554846
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| |||||||||||||  ||||||||||  |||||||||||||||||    
T  46554796 ttgttttaaaatgaatgtcaccttcagtttccactgcaataataacttttt 46554846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 9659178 - 9659231
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| |||||||| ||| | ||||| ||||||||||||| |||||||||    
T  9659178 gctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgc 9659231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 10422897 - 10422844
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| |||||||||||  | ||||| ||||||||||||| |||||||||    
T  10422897 gctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgc 10422844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 13408418 - 13408365
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||| | | ||||||||| | |||||||||||||||||||||    
T  13408418 ttgttttaaaatgaattttactttcagttttcaatgcaataataactttttctt 13408365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 18794694 - 18794642
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||| |||||||||| |||||||  |||||||||||||||||||||    
T  18794694 ttgttttaaaataaatgtcattt-cagtttcgaatgcaataataactttttctt 18794642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 24611669 - 24611620
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||| ||| ||||||  ||| |||||||||||||||||    
T  24611669 ttcaaaatgaatgtcacttttagtttctaatgtaataataactttttctt 24611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 25151821 - 25151866
Alignment:
Q  190 aaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| |||| |||||| ||||||||||||| |||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttctt 25151866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 31491923 - 31491870
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| ||| | |||  ||||||||||||||||    
T  31491923 ttgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttctt 31491870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 32142845 - 32142898
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||||||||||||||| ||||||| ||  ||||||||  |||||||||    
T  32142845 gctttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgc 32142898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 48009008 - 48009061
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| |||||||||| |||||| |||||   |||||||||||||||||||||    
T  48009008 ttgttttaaaatgaatggcatttttagtttttaatgcaataataactttttctt 48009061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 51437566 - 51437513
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| |||||||||||| | ||||| |||| |||||||| |||||||||    
T  51437566 gctttcgcaccggtttccgacccaccaaaggtggatgactaatccggctcatgc 51437513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 31576547 - 31576599
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||| ||| |||||||||||  ||||||||||||||||||| | |||||||||    
T  31576547 cttttgcaccggtttccgacacatcaaagatggacgactaagccggctcatgc 31576599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 46929737 - 46929789
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatg 165  Q
    |||||||||||||||| ||| | ||||||  ||||||||||||| ||||||||    
T  46929737 gctttcgcatcggttttcgatccatcaaaagtggacgactaatccggctcatg 46929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 9796 - 9743
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  9796 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 9743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 18405 - 18356
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18405 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 18356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 24895 - 24842
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  24895 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 24842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 15160601 - 15160548
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  15160601 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15160548  T

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Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 39463257 - 39463310
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  39463257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39463310  T

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Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 39698821 - 39698768
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  39698821 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39698768  T

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Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 43027417 - 43027364
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  43027417 gctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgc 43027364  T

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Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 35356308 - 35356358
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  35356308 tttcaaaatgaatatcattttcagtttccaatgcaataataactttttctt 35356358  T

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Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 4989476 - 4989529
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  4989476 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttctt 4989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 6374412 - 6374465
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 6374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 39766014 - 39765961
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  39766014 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 39765961  T

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Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 40228572 - 40228625
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  40228572 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40228625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 43448714 - 43448764
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttt 43448764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 43974943 - 43974893
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  43974943 tttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 43974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 7839456 - 7839509
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||    
T  7839456 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttctt 7839509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 8997542 - 8997595
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| |||||||||||| | |||||||| ||||||||||||||||||||    
T  8997542 gctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgc 8997595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 17920954 - 17921007
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||| | |||||||||||||||||||||    
T  17920954 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 17921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 29025901 - 29025848
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| |||||||| ||| ||||||| |||||||||||||||||||||    
T  29025901 ttgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttctt 29025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 40362433 - 40362486
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||| | |||||||||||||||||||||    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 43724379 - 43724434
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttcttct 237  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||| ||||| ||||    
T  43724379 ttgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttct 43724434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 9812171 - 9812221
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| ||||||||||||| ||||||||||  ||||||||||||||||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataacttttt 9812221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 26571037 - 26570983
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||| ||||||||||||||  ||||||| ||||||||||||| |||||||||    
T  26571037 ggctttcacatcggtttccgactcatcaaaggtggacgactaatccggctcatgc 26570983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 29312341 - 29312303
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataac 227  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  29312341 aaaatgaatgtcattttcagtttccaatgcaataataac 29312303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 31693777 - 31693723
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  31693777 tttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttctt 31693723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 43084775 - 43084729
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||||    
T  43084775 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 43084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 45359050 - 45358996
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| ||||||||||| ||| | |||||||||||| ||||||||    
T  45359050 tttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttctt 45358996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 9304788 - 9304735
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||| | ||| ||||||| |||||||||||| ||||||||    
T  9304788 ttgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttctt 9304735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 9880656 - 9880603
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| |  |||||||| |||||||||||| ||||||||    
T  9880656 ttgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttctt 9880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 37559688 - 37559635
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||| ||||||| ||||||||||| || ||||||||||||||||||    
T  37559688 ttgttttaaaatcaatgtcactttcagtttccaatacaataataactttttctt 37559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 39969913 - 39969965
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatg 165  Q
    |||||||||||||||||||| | ||||| ||||| ||||||||||| ||||||    
T  39969913 gctttcgcatcggtttccgatccatcaatgatgggcgactaatctgactcatg 39969965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 396369 - 396315
Alignment:
Q  182 ttgtttcaaaatgaatgtca-ttttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||||   |||||||||||||||||||||    
T  396369 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 10927719 - 10927665
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||||||||||||||| |  |||| || |||||||||| |||||||||    
T  10927719 ggctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgc 10927665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 13496240 - 13496286
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| ||||||| ||||| ||||||||||||| |||||||    
T  13496240 aaaatgaatgttattttcaatttccaatgcaataataacgttttctt 13496286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 19438233 - 19438287
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||| |||| ||||||| | ||||||||| ||| |||||||||||||||||    
T  19438233 tttgtttcgaaataaatgtcactctcagtttccaatgtaataataactttttctt 19438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 44713532 - 44713582
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| ||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  44713532 ttgttttaaaatgaatatcactttcattttccaatgcaataataacttttt 44713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 4760713 - 4760660
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||| ||||| |||||| ||||| ||||||||    
T  4760713 ttgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttctt 4760660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 6116160 - 6116107
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||| ||| |||| |||| | |||||||||||||||||||||    
T  6116160 ttgttttaaaatgaatatcactttcggttttcaatgcaataataactttttctt 6116107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 32414725 - 32414762
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgca 219  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  32414725 ttgtttcaaaatgaatgtcatttttagtttccaatgca 32414762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 45521280 - 45521227
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| |||||||||||| ||||||| ||  ||||||||| |||||||||    
T  45521280 gctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgc 45521227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 5295556 - 5295508
Alignment:
Q  187 tcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| ||| ||||||  |||||||||||| ||||||||    
T  5295556 tcaaaatgaatgtcactttaagtttctaatgcaataataattttttctt 5295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 9859993 - 9860045
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatg 165  Q
    ||||| |||||||||||||| | | ||| | ||||||||||||||||||||||    
T  9859993 gcttttgcatcggtttccgatccaccaatggtggacgactaatctggctcatg 9860045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 22297994 - 22298047
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  22297994 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 22298047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 24680126 - 24680179
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 24680179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 45948783 - 45948730
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  45948783 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 716017 - 715963
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  716017 tttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 34274791 - 34274845
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  34274791 tttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 34274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 1741989 - 1742042
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  1741989 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 1742042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 12977839 - 12977786
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  12977839 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 12977786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 42285906 - 42285959
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 42285959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 18270574 - 18270626
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttc 233  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  18270574 tttggttcaaaatgaatgtcactttcagtttccaatgcaataataactttttc 18270626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  184 gtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 18292333 - 18292384
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttc 233  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttc 18292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 21752260 - 21752213
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttc 233  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  21752260 ttcaaaataaatgtcattttcagtttccaatgcaataataactttttc 21752213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 2297036 - 2297089
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||| | ||||||||||| |||||||||    
T  2297036 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttctt 2297089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 13405280 - 13405227
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttctt 13405227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 23935420 - 23935473
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||| |||||| |||||||||||| |||||||||||||||||||||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttctt 23935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 37502321 - 37502370
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  37502321 ttcaaaatgaacgtcactttcagtttccaatgcaataataactttttctt 37502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 42880087 - 42880034
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttctt 42880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 10599212 - 10599264
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  10599212 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 10599264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 48684726 - 48684774
Alignment:
Q  187 tcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  48684726 tcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 48684774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 10476141 - 10476187
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  10476141 aaaatgaatgtcactttcactttccaatgcaataataactttttctt 10476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 17748379 - 17748429
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||| |||||    
T  17748379 ggctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctc 17748429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 24780459 - 24780409
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||| ||||||||||  |||||||||||| |||||    
T  24780459 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataatttttt 24780409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 27935765 - 27935815
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| ||||||||||||| ||||||||| | ||||||||||||||||||    
T  27935765 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 27935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 27947647 - 27947601
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||||| | |||||||||||||||||||||    
T  27947647 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 27947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 31418667 - 31418613
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| |||  || ||||||||||| |||||||||||||||||||||    
T  31418667 tttgtttcaaaataaattccactttcagtttccaatgcaataataactttttctt 31418613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 6747225 - 6747274
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttt 231  Q
    |||||| |||| |||||||| ||||||||||| |||||||||||||||||    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataactttt 6747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 8603973 - 8604026
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| |||||||| |||| ||||| ||||| |||||||||||||||||||||    
T  8603973 ttgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttctt 8604026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 19105154 - 19105101
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| |||||||||   |||||||||||||||||||||    
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttctt 19105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 29531080 - 29531035
Alignment:
Q  190 aaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||    
T  29531080 aaatgaatgtcattttcagttttcaatgcaataataattttttctt 29531035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 37490782 - 37490835
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  37490782 ttgtatcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 37490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 48843549 - 48843602
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttct 234  Q
    ||||||| ||||||||||||| ||||||||| | |||||||||||| |||||||    
T  48843549 tttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttct 48843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 44453141 - 44453181
Alignment:
Q  190 aaatgaatgtcattttcagtttccgatgcaataataacttt 230  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  44453141 aaatgaatgtcactttcagtttccaatgcaataataacttt 44453181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 48551969 - 48551917
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcat 164  Q
    |||||||||| |||||||||| | ||||||| ||||||||||||| |||||||    
T  48551969 ggctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcat 48551917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 16565253 - 16565214
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaat 221  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  16565253 ttgtttcaaaatgaatgtcattttcagtttctaatgcaat 16565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Original strand, 16600409 - 16600448
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaat 221  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  16600409 ttgtttcaaaatgaatgtcattttcagtttctaatgcaat 16600448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 25440884 - 25440923
Alignment:
Q  196 atgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  25440884 atgtcactttcagtttccaatgcaataataactttttctt 25440923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 1031153 - 1031203
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||| ||||    
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataacatttt 1031203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 22974079 - 22974025
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||  ||||||| |||| | ||||| |||||||||||||||||||||||    
T  22974079 ggctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgc 22974025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 35777817 - 35777867
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||| ||||||| |||| |||||  ||||||||||||||||||    
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataacttttt 35777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 40753574 - 40753528
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||||| | ||| |||||||| ||||||||    
T  40753574 aaaatgaatgtcattttcagttttcaatgtaataataattttttctt 40753528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 41267929 - 41267975
Alignment:
Q  120 catcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||||||| ||||||| ||||||||||||||  |||||||    
T  41267929 catcggtttccgacccatcaaaggtggacgactaatctaactcatgc 41267975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 42753705 - 42753751
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataac 227  Q
    ||||||||||||||||||||| ||||| ||||| || ||||||||||    
T  42753705 tttgtttcaaaatgaatgtcactttcaatttccaatacaataataac 42753751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 44567195 - 44567141
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||||||||| ||||| ||| | |||||||||||| ||||||||    
T  44567195 tttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttctt 44567141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 5069812 - 5069861
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggct 161  Q
    ||||||||||||||||||||||| | ||||| ||| ||||||||| ||||    
T  5069812 ggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggct 5069861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 8734684 - 8734733
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    ||||||||| |||||||||||| | ||||| ||| |||||||||||||||    
T  8734684 gctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctc 8734733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 24133283 - 24133230
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||| |||| |||| ||||||||||| |||||||||||| ||||||||    
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttctt 24133230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 33939887 - 33939834
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| |||  |||||| ||| |||||||||||||||||    
T  33939887 ttgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctt 33939834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 37815722 - 37815775
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||  ||||| ||||| || ||||||||| ||||||||    
T  37815722 ttgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttctt 37815775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 41137726 - 41137779
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||| |||||||| || ||| ||||||| |||||||||||| ||||||||    
T  41137726 ttgtttcacaatgaatgccacttttagtttccaatgcaataataattttttctt 41137779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 42032207 - 42032154
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||| |||||||||||||||| ||||||| ||||| ||||||  |||||||||    
T  42032207 gctttagcatcggtttccgacccatcaaaggtggacaactaattcggctcatgc 42032154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 45499980 - 45499927
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||| ||| ||||||||||| |||| |||||||  |||||||    
T  45499980 ttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttctt 45499927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 48804794 - 48804741
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| |||||||||||| | ||| | ||||||||||||| |||||||||    
T  48804794 gctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgc 48804741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 38578866 - 38578918
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||| |||||||||||| | ||||| ||| ||||||||| |||||||||    
T  38578866 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgc 38578918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 40339457 - 40339505
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttt 230  Q
    |||||||||||||| ||||| ||||| ||| | ||||||||||||||||    
T  40339457 ttgtttcaaaatgactgtcactttcaattttcaatgcaataataacttt 40339505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 19674982 - 19675031
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19674982 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 19675031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 234032 - 234085
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  234032 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 4850650 - 4850597
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 4850597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 13504002 - 13503953
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 13503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 23259480 - 23259431
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttt 231  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataactttt 23259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 29399944 - 29399997
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  29399944 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 29399997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 29713557 - 29713508
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  29713557 ttcaaaatgaatgtcattttccgtttccaatgcaataataactttttctt 29713508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 34954617 - 34954670
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  34954617 gctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgc 34954670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 31443601 - 31443551
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||    
T  31443601 ttgtttaaaaatgaatgttattttcagtttccaatgcaataataacttttt 31443551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 18737245 - 18737192
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttctt 18737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 24163869 - 24163816
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  24163869 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 24163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 17552400 - 17552357
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataata 225  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  17552400 ttgtttcgaaatgaatgtcattttcagtttccaatgcaataata 17552357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 12063665 - 12063615
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||| |||||    
T  12063665 ttgtttccaaatgaatgtcactttcagtttccaatgcaataataatttttt 12063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 32429282 - 32429335
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| |||||||| ||| | ||||| |||||||||||||||||||||    
T  32429282 ttgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttctt 32429335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 8938822 - 8938770
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||| |||||||||||| ||||||| ||||||||||||  |||||||||    
T  8938822 ctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgc 8938770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 12323035 - 12322996
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataata 225  Q
    |||||||||||||||| ||||||||||| |||||||||||    
T  12323035 ttcaaaatgaatgtcactttcagtttccaatgcaataata 12322996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 6606094 - 6606148
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| |||||||||||| | ||| | ||||||||||||| |||||||||    
T  6606094 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgc 6606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 10540663 - 10540613
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||| ||||||| ||||| ||||| ||||||||||||| ||||    
T  10540663 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataacctttt 10540613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 14783417 - 14783471
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| |||||||||||| | ||| | ||||||||||||| |||||||||    
T  14783417 ggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgc 14783471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 21272258 - 21272204
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||||| ||| ||||||||||| ||| ||||||||| |||||||    
T  21272258 tttgttttaaaatgaatatcactttcagtttccaatgtaataataacattttctt 21272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 3601196 - 3601147
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    ||||||||| |||||||||||| | ||||| ||||||||||||| |||||    
T  3601196 gctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctc 3601147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 9940646 - 9940695
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttt 231  Q
    |||||| ||||||| ||||| ||||||||| | |||||||||||||||||    
T  9940646 ttgttttaaaatgattgtcactttcagttttcaatgcaataataactttt 9940695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 13036002 - 13036055
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| |||||||||||| | |||   |||||||||||||||||||||||    
T  13036002 gctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgc 13036055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 1502893 - 1502841
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||| ||||| ||||||||||||||||||| |||||||| ||| | ||||||    
T  1502893 tgttttaaaattaatgtcattttcagtttccaatgcaatagtaattatttctt 1502841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 5029930 - 5029886
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatc 156  Q
    |||||||||| | |||||||||| ||||||||||| |||||||||    
T  5029930 ggctttcgcaccagtttccgacccatcaaagatgggcgactaatc 5029886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 12588531 - 12588579
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttcttct 237  Q
    ||||||||||| | ||||||||| | |||||||||||||||||| ||||    
T  12588531 aaaatgaatgttactttcagtttgcaatgcaataataacttttttttct 12588579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 34513737 - 34513705
Alignment:
Q  203 tttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| |||||||||||||||||||||    
T  34513737 tttcagtttccaatgcaataataactttttctt 34513705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 7317026 - 7317079
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  7317026 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 7317079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 10345087 - 10345034
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  10345087 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 10345034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 42104218 - 42104165
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 42104165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 14620646 - 14620596
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  14620646 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 14620596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 21319466 - 21319412
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  21319466 tttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttctt 21319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 39566180 - 39566234
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  39566180 tttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39566234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 39729960 - 39730010
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  39729960 tttcaaaatgaatgttattttcagtttccaatgcaataataactttttctt 39730010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 2729941 - 2729888
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  2729941 ttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttctt 2729888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 3025086 - 3025033
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  3025086 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 3025033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 27797786 - 27797832
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  27797786 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 27797832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 36164892 - 36164938
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||    
T  36164892 aaaatgaatgtcattttcagtttccaatgcagtaataactttttctt 36164938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 6518974 - 6519027
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||  ||||||||| | |||||||||||||||||||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttctt 6519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 15167164 - 15167115
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15167115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 24280991 - 24281044
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 24381221 - 24381168
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 34446182 - 34446129
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||||||| | || |||||||||| |||||||    
T  34446182 ttgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttctt 34446129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 3306157 - 3306111
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  3306157 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 3306111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 27648424 - 27648474
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcat 164  Q
    ||||||||||||||||||| | | ||||||||||||||||||| |||||||    
T  27648424 ctttcgcatcggtttccgatccaccaaagatggacgactaatccggctcat 27648474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 39504720 - 39504774
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaa-taataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttctt 39504774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 42086437 - 42086383
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| |||||||||||| | ||||| ||||||||||||| |||||||||    
T  42086437 ggctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgc 42086383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 43584532 - 43584482
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||| |||||||||||| |||||||||| | ||||||||||||||||||    
T  43584532 ttgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttt 43584482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 8513628 - 8513579
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    ||||||||| |||||||||||| | ||||| |||||||||||||||||||    
T  8513628 gctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctc 8513579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 13761555 - 13761608
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| ||| | |||||||||||| ||||||||    
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttctt 13761608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 25362955 - 25362902
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||| | ||||||||||  |||||||||| ||||||||||    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttctt 25362902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 26660753 - 26660806
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||| ||| | |||||||||||||||||||||    
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26660806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 26932346 - 26932399
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||| ||| | |||||||||||||||||||||    
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 35766051 - 35766002
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||| ||||||||| | || ||||||||||||||||||    
T  35766051 ttcaaaatgaatgtcactttcagttttcaatacaataataactttttctt 35766002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 36073785 - 36073732
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| |||||||||||||||| | ||| | |||||||||||||||||||||    
T  36073785 ttgtttctaaatgaatgtcattttaaattttcaatgcaataataactttttctt 36073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 38362291 - 38362243
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttt 231  Q
    ||||||||||||||||||| ||||| ||| | |||||||||||||||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttt 38362243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 34209052 - 34208999
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttcc---gatgcaataataacttttt 232  Q
    |||||||||||||||||||| |||||||||||    ||||||||||||||||||    
T  34209052 ttgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttt 34208999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 9805114 - 9805060
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||| | |||||||||| | ||||| ||||||||||||| |||||||||    
T  9805114 ggctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgc 9805060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 21195380 - 21195430
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| ||||| ||| ||||||| |||||||||||| ||||||||    
T  21195380 tttcaaaatgattgtcaatttaagtttccaatgcaataataattttttctt 21195430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 21375461 - 21375407
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||  ||||||||| | ||||||||||||||||||||| | |||||||    
T  21375461 ggctttcgcactggtttccgatccatcaaagatggacgactaatccgactcatgc 21375407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 23247349 - 23247398
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    |||||||||| |||||| |||||| |||||| |||||||||||||||||||    
T  23247349 ggctttcgcaccggttttcgacca-tcaaaggtggacgactaatctggctc 23247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 4911305 - 4911252
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||| ||| ||||||| ||| ||||||| |||||||||    
T  4911305 ttgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttctt 4911252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 7580024 - 7579971
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||| | ||||||||| | || ||||||||||||||||||    
T  7580024 ttgttttaaaatgaatgttactttcagttttcaatacaataataactttttctt 7579971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 9066578 - 9066525
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||| | ||||||||| | ||||||||||||  |||||||    
T  9066578 ttgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttctt 9066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 11977590 - 11977639
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| |||||||| ||||||||||| || | ||||||||||||||||    
T  11977590 ttcaaaacgaatgtcactttcagtttccaataccataataactttttctt 11977639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 5731917 - 5731969
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcat 164  Q
    |||||||||| |||||||||||| |  |||| || ||||||||||||||||||    
T  5731917 ggctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcat 5731969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 14005911 - 14005943
Alignment:
Q  203 tttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| |||||||||||||||||||||    
T  14005911 tttcagtttccaatgcaataataactttttctt 14005943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 25950593 - 25950645
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||| ||| ||||| | ||||| ||||||||||||| |||||||||    
T  25950593 ctttcgcatcgattttcgacccaccaaaggtggacgactaatccggctcatgc 25950645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 27600418 - 27600450
Alignment:
Q  203 tttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| |||||||||||||||||||||    
T  27600418 tttcagtttccaatgcaataataactttttctt 27600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 2728553 - 2728504
Alignment:
Q  186 ttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2728553 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 2728504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 4505335 - 4505388
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  4505335 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 4505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 10573313 - 10573260
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttctt 10573260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 19451370 - 19451317
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19451317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 19930712 - 19930765
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  19930712 ttgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttctt 19930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 52957949 - 52957896
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  52957949 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 52957896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 7906152 - 7906102
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  7906152 tttcaaaatgaatgtcactttcagtttccggtgcaataataactttttctt 7906102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 24940876 - 24940930
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  24940876 tttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttctt 24940930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 1819560 - 1819613
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  1819560 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 1819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 19878646 - 19878699
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  19878646 ttgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19878699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 37624554 - 37624607
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  37624554 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 37624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 40345506 - 40345453
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 40345453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 52253843 - 52253896
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  52253843 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctt 52253896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 52915701 - 52915648
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  52915701 ttgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttctt 52915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 39982106 - 39982154
Alignment:
Q  187 tcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  39982106 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39982154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 40837128 - 40837178
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt 40837178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 16450413 - 16450360
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||| |||||||||||| | ||||| |||||||||||||||||||||||    
T  16450413 gctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgc 16450360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 20448037 - 20448090
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 20448090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 22220518 - 22220465
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||||||||| ||| | |||||||||||||||||||||    
T  22220518 ttgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttctt 22220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 25231173 - 25231226
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  25231173 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 25231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 30261257 - 30261310
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||  |||||||    
T  30261257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttctt 30261310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 41920468 - 41920415
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||| ||||||||||||||||||| | |||||||||||||||||||    
T  41920468 ttgttttaaaataaatgtcattttcagtttccaaagcaataataactttttctt 41920415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 51733653 - 51733600
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||  |||||||||||| ||||||||    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctt 51733600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 52950195 - 52950143
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatg 165  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||| |||||    
T  52950195 gctttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatg 52950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 46108798 - 46108751
Alignment:
Q  119 gcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||    
T  46108798 gcatcggtttccgacccatcaaaagtggacgactaatctggctcatgc 46108751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 21864535 - 21864489
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||    
T  21864535 aaaatgaatgttactttcagtttccaatgcaataataactttttctt 21864489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 21920396 - 21920350
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||||    
T  21920396 aaaatgaatgttactttcagtttccaatgcaataataactttttctt 21920350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 29519684 - 29519634
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||| ||||||| ||| ||||||| ||||||||||||||||||    
T  29519684 ttgtttcaaaataaatgtcacttttagtttccaatgcaataataacttttt 29519634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 49089462 - 49089512
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||| ||| ||||| | ||||||||||||||||||    
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataacttttt 49089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 2493100 - 2493153
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||| |||| ||||| ||||| |||||||||||| ||||||||    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttctt 2493153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 36558452 - 36558407
Alignment:
Q  191 aatgaatgtcattttcagtttccgatgcaataataactttttcttc 236  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||||    
T  36558452 aatgaatgccattttcaatttcccatgcaataataactttttcttc 36558407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 44572024 - 44571971
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||  ||||||||||| ||||||||| |||||||||||    
T  44572024 ttgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttctt 44571971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 45043747 - 45043694
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  45043747 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 45043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 47817736 - 47817789
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||| | | ||||||||| | |||||||||||||||||||||    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttctt 47817789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 52848213 - 52848160
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| ||||| ||||| |||||||||||| ||||||||    
T  52848213 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 52848160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 27943705 - 27943658
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactt 229  Q
    |||||||||||||||||||| ||||| ||| | |||||||||||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactt 27943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 40780861 - 40780912
Alignment:
Q  115 tttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||| |||||||||||| | ||||| ||||||||||||| |||||||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgc 40780912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 20421875 - 20421833
Alignment:
Q  124 ggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||    
T  20421875 ggtttccgacccatcaatgatggacgattaatctggctcatgc 20421833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 25406560 - 25406606
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctg 158  Q
    |||||||||| |||||||||||| ||||||| || ||||||||||||    
T  25406560 ggctttcgcaccggtttccgacccatcaaaggtgaacgactaatctg 25406606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 34413706 - 34413656
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||| ||||||| ||||| ||||  ||||||||||||||||||    
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataacttttt 34413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 49080635 - 49080586
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataacttttt 232  Q
    |||||||||||||||||||| |||||||||   ||||||||||||||||||    
T  49080635 ttgtttcaaaatgaatgtcactttcagttt-taatgcaataataacttttt 49080586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 50203074 - 50203125
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| |||||||  || |||||||||||||||||||||    
T  50203074 ttgttttaaaatgaatgtcactttcagt--ccaatgcaataataactttttctt 50203125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 24157183 - 24157236
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||||||| ||| ||||||  |||||||||||| ||||||||    
T  24157183 ttgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctt 24157236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 36145212 - 36145265
Alignment:
Q  112 ggctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatg 165  Q
    |||||||||| ||||||||||   ||||||| ||||||||||||| ||||||||    
T  36145212 ggctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatg 36145265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 37654408 - 37654460
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| || |||||||| || ||||||||||||||||||    
T  37654408 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctt 37654460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 38841366 - 38841419
Alignment:
Q  113 gctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||||||| ||||||| | | ||||||||||||||||||| | |||||||    
T  38841366 gctttcgcatcgatttccgaactaccaaagatggacgactaatccgactcatgc 38841419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 41496203 - 41496256
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||| ||| ||| ||||||||| | || ||||||||||||||||||    
T  41496203 ttgtttcaaaataaatctcactttcagttttcaatacaataataactttttctt 41496256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 50623081 - 50623134
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| |||||| |||| ||||| ||||| | |||||||||||||||||||||    
T  50623081 ttgttttaaaatgtatgttatttttagttttcaatgcaataataactttttctt 50623134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 54042342 - 54042289
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||| ||||||||||||| |||| |||||| ||| |||||||| ||||||||    
T  54042342 ttgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttctt 54042289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 7246645 - 7246697
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctcatgc 166  Q
    |||||||| |||||||||||| | ||||| ||| ||||||||| |||||||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgc 7246697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 28734596 - 28734640
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataa 226  Q
    |||||||| ||||||||||| |||||||||||  |||||||||||    
T  28734596 ttgtttcataatgaatgtcactttcagtttccattgcaataataa 28734640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 33033076 - 33033120
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataa 226  Q
    |||||| ||||||||||||| ||| ||||||| ||||||||||||    
T  33033076 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataa 33033120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 43458725 - 43458677
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    |||||||| |||||||||||  ||||||| ||||||||||||| |||||    
T  43458725 ctttcgcaacggtttccgactcatcaaaggtggacgactaatccggctc 43458677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 50621341 - 50621293
Alignment:
Q  187 tcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||| ||||||| ||| ||||| | |||||||||||||||||||||    
T  50621341 tcaaaataaatgtcactttaagttttcaatgcaataataactttttctt 50621293  T

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Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 56460082 - 56460134
Alignment:
Q  183 tgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||| ||||||||||||| |||||| || | |||||||| ||||||||||||    
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctt 56460134  T

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Target: scaffold0332 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 3966 - 3912
Alignment:
Q  181 tttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  3966 tttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3912  T

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Target: scaffold0048 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 62631 - 62684
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  62631 ttgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctt 62684  T

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Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 3656 - 3606
Alignment:
Q  185 tttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  3656 tttcaaaatgaatgtcactttcagtttccaatacaataataactttttctt 3606  T

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Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 1568 - 1515
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||||||||||||||| ||||||||||  ||||||| |||||||||||||    
T  1568 ttgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttctt 1515  T

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Target: scaffold2107 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 661 - 615
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  661 aaaatgaatgtcactttcagtttccaatgcaataataattttttctt 615  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 224427 - 224379
Alignment:
Q  114 ctttcgcatcggtttccgaccaatcaaagatggacgactaatctggctc 162  Q
    |||||||| |||||||||||| | ||||||||||||||||||| |||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctc 224379  T

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Target: scaffold0502 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 719 - 673
Alignment:
Q  189 aaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    ||||||||||||| || || ||||| |||||||||||||||||||||    
T  719 aaaatgaatgtcacttacaatttccaatgcaataataactttttctt 673  T

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Target: scaffold0983 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 841 - 788
Alignment:
Q  182 ttgtttcaaaatgaatgtcattttcagtttccgatgcaataataactttttctt 235  Q
    |||||||| ||||||||||| |||||||||||  || |||||||| ||||||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttctt 788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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