View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2566_low_51 (Length: 238)

Name: NF2566_low_51
Description: NF2566
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2566_low_51
NF2566_low_51
[»] chr7 (35 HSPs)
chr7 (16-193)||(1418355-1418530)
chr7 (115-173)||(39591535-39591593)
chr7 (93-166)||(30456496-30456569)
chr7 (27-80)||(30751566-30751619)
chr7 (112-176)||(35536048-35536112)
chr7 (120-162)||(9527163-9527205)
chr7 (94-164)||(34754856-34754926)
chr7 (22-88)||(48157085-48157151)
chr7 (119-176)||(1417205-1417262)
chr7 (119-176)||(5006581-5006638)
chr7 (119-175)||(25511569-25511625)
chr7 (123-179)||(28178907-28178963)
chr7 (191-226)||(1416965-1417000)
chr7 (104-178)||(7453454-7453529)
chr7 (93-176)||(7623079-7623162)
chr7 (117-176)||(8680933-8680992)
chr7 (93-176)||(27492736-27492819)
chr7 (119-166)||(39551620-39551667)
chr7 (117-176)||(45593789-45593848)
chr7 (93-159)||(44151526-44151592)
chr7 (120-166)||(45813253-45813299)
chr7 (147-176)||(2013140-2013169)
chr7 (119-176)||(23918898-23918955)
chr7 (119-176)||(27121658-27121715)
chr7 (119-176)||(28165032-28165089)
chr7 (119-176)||(33894564-33894620)
chr7 (123-160)||(44239056-44239093)
chr7 (119-176)||(48157192-48157249)
chr7 (140-176)||(1432060-1432096)
chr7 (16-52)||(10079298-10079334)
chr7 (122-166)||(12835012-12835056)
chr7 (120-176)||(30496645-30496701)
chr7 (94-154)||(31338471-31338531)
chr7 (119-163)||(46825052-46825096)
chr7 (119-167)||(47046180-47046228)
[»] scaffold0024 (1 HSPs)
scaffold0024 (93-176)||(27517-27600)
[»] chr4 (31 HSPs)
chr4 (119-176)||(44119234-44119291)
chr4 (93-174)||(49219082-49219163)
chr4 (135-176)||(19422359-19422400)
chr4 (94-166)||(10192235-10192307)
chr4 (100-164)||(53626729-53626793)
chr4 (119-166)||(25434532-25434579)
chr4 (97-166)||(24929444-24929513)
chr4 (119-172)||(30024645-30024698)
chr4 (119-176)||(30338664-30338721)
chr4 (94-166)||(18630631-18630703)
chr4 (119-175)||(54325109-54325165)
chr4 (119-166)||(4071833-4071880)
chr4 (100-159)||(46796976-46797035)
chr4 (119-174)||(54327521-54327576)
chr4 (112-178)||(31038932-31038998)
chr4 (114-176)||(49803152-49803214)
chr4 (94-163)||(3175905-3175974)
chr4 (134-175)||(9319282-9319323)
chr4 (119-176)||(32724060-32724117)
chr4 (120-166)||(44019474-44019522)
chr4 (135-176)||(51044547-51044588)
chr4 (124-176)||(5131309-5131361)
chr4 (95-179)||(17884006-17884090)
chr4 (99-175)||(19691349-19691425)
chr4 (99-175)||(19701934-19702010)
chr4 (119-175)||(22684588-22684644)
chr4 (124-176)||(23815311-23815363)
chr4 (120-176)||(36734834-36734890)
chr4 (119-179)||(44319888-44319947)
chr4 (127-167)||(47800580-47800620)
chr4 (100-176)||(55870394-55870470)
[»] chr5 (22 HSPs)
chr5 (100-176)||(37063127-37063203)
chr5 (112-176)||(12407726-12407790)
chr5 (94-166)||(14295457-14295529)
chr5 (120-166)||(28586839-28586885)
chr5 (95-176)||(18704084-18704164)
chr5 (119-176)||(29117002-29117059)
chr5 (119-176)||(35135734-35135791)
chr5 (94-166)||(4855649-4855721)
chr5 (117-176)||(36639463-36639522)
chr5 (124-166)||(10303752-10303794)
chr5 (94-176)||(32172594-32172676)
chr5 (119-176)||(985574-985631)
chr5 (135-176)||(7096215-7096256)
chr5 (93-166)||(14257416-14257489)
chr5 (115-176)||(20982203-20982264)
chr5 (99-176)||(37690689-37690766)
chr5 (128-173)||(41981789-41981834)
chr5 (93-172)||(912694-912774)
chr5 (100-164)||(12595793-12595857)
chr5 (119-163)||(30585630-30585674)
chr5 (93-153)||(41277396-41277456)
chr5 (60-88)||(42181095-42181123)
[»] chr1 (32 HSPs)
chr1 (100-175)||(49517012-49517087)
chr1 (119-176)||(15360835-15360892)
chr1 (119-165)||(1879099-1879145)
chr1 (119-173)||(4200173-4200227)
chr1 (123-176)||(50319233-50319286)
chr1 (96-176)||(7273988-7274068)
chr1 (123-167)||(14737781-14737825)
chr1 (119-179)||(45999360-45999420)
chr1 (30-93)||(4202125-4202187)
chr1 (94-173)||(7218121-7218200)
chr1 (123-166)||(23373366-23373409)
chr1 (117-176)||(36151575-36151634)
chr1 (94-176)||(17269191-17269273)
chr1 (135-173)||(36641819-36641857)
chr1 (100-166)||(40304107-40304173)
chr1 (93-167)||(51695541-51695614)
chr1 (119-176)||(870986-871043)
chr1 (119-164)||(27738252-27738297)
chr1 (93-166)||(30285842-30285915)
chr1 (61-90)||(33975607-33975636)
chr1 (94-155)||(37272633-37272694)
chr1 (121-166)||(38867907-38867952)
chr1 (119-164)||(44032071-44032116)
chr1 (123-176)||(45327548-45327601)
chr1 (119-176)||(48830148-48830205)
chr1 (138-175)||(49557083-49557120)
chr1 (16-88)||(6279438-6279510)
chr1 (94-154)||(30257646-30257706)
chr1 (100-160)||(30371105-30371165)
chr1 (94-162)||(34179919-34179987)
chr1 (119-167)||(44936662-44936710)
chr1 (135-179)||(52559916-52559960)
[»] scaffold0508 (1 HSPs)
scaffold0508 (94-176)||(9822-9904)
[»] chr8 (22 HSPs)
chr8 (103-176)||(29699195-29699268)
chr8 (119-166)||(44348438-44348485)
chr8 (115-164)||(2100758-2100807)
chr8 (100-176)||(5071020-5071096)
chr8 (93-165)||(10437837-10437908)
chr8 (119-166)||(25867037-25867084)
chr8 (135-174)||(26820142-26820181)
chr8 (117-176)||(29056061-29056120)
chr8 (109-176)||(31915331-31915398)
chr8 (135-178)||(40728506-40728549)
chr8 (94-176)||(1470903-1470985)
chr8 (35-88)||(5088891-5088944)
chr8 (27-88)||(6509273-6509334)
chr8 (135-164)||(7853359-7853388)
chr8 (95-164)||(11795045-11795114)
chr8 (100-173)||(12361136-12361209)
chr8 (135-176)||(14482143-14482184)
chr8 (93-166)||(28784841-28784914)
chr8 (135-176)||(39392749-39392790)
chr8 (135-167)||(8799355-8799387)
chr8 (94-166)||(34770843-34770915)
chr8 (124-176)||(42597342-42597394)
[»] chr3 (32 HSPs)
chr3 (94-179)||(22232764-22232849)
chr3 (119-166)||(905042-905089)
chr3 (119-166)||(49586988-49587035)
chr3 (119-176)||(1395612-1395669)
chr3 (119-172)||(10101548-10101601)
chr3 (119-172)||(10212473-10212526)
chr3 (93-166)||(33405213-33405286)
chr3 (119-176)||(41028923-41028980)
chr3 (124-176)||(48364956-48365008)
chr3 (95-167)||(49254707-49254779)
chr3 (115-167)||(53736181-53736233)
chr3 (138-177)||(33882968-33883007)
chr3 (119-166)||(42038940-42038987)
chr3 (120-166)||(15304420-15304466)
chr3 (94-176)||(27792813-27792895)
chr3 (120-166)||(34954034-34954080)
chr3 (30-88)||(49465909-49465967)
chr3 (93-166)||(3365356-3365429)
chr3 (119-176)||(20669120-20669177)
chr3 (119-160)||(23793545-23793586)
chr3 (135-176)||(24605104-24605145)
chr3 (121-166)||(26990685-26990730)
chr3 (121-166)||(38462232-38462277)
chr3 (123-176)||(40122828-40122881)
chr3 (119-176)||(42809242-42809299)
chr3 (120-176)||(20192679-20192735)
chr3 (120-176)||(22214754-22214810)
chr3 (135-175)||(24235771-24235811)
chr3 (94-166)||(24887330-24887402)
chr3 (120-176)||(25129771-25129827)
chr3 (94-166)||(36646429-36646501)
chr3 (135-167)||(54775078-54775110)
[»] chr6 (27 HSPs)
chr6 (120-176)||(24836272-24836328)
chr6 (16-88)||(34538177-34538249)
chr6 (113-164)||(29940749-29940800)
chr6 (119-176)||(29274301-29274358)
chr6 (94-166)||(281895-281967)
chr6 (94-166)||(4006665-4006737)
chr6 (94-178)||(7354143-7354227)
chr6 (95-163)||(11340673-11340741)
chr6 (94-166)||(24782010-24782082)
chr6 (100-176)||(33787798-33787874)
chr6 (100-183)||(4247114-4247197)
chr6 (119-166)||(21959679-21959726)
chr6 (138-176)||(507161-507199)
chr6 (93-155)||(1497943-1498005)
chr6 (94-176)||(20671912-20671994)
chr6 (120-166)||(30537019-30537065)
chr6 (119-176)||(33068633-33068690)
chr6 (60-88)||(283134-283162)
chr6 (94-166)||(1402947-1403019)
chr6 (135-167)||(5328924-5328956)
chr6 (119-159)||(7713983-7714023)
chr6 (16-88)||(8420156-8420228)
chr6 (112-164)||(10154174-10154226)
chr6 (112-164)||(27595632-27595684)
chr6 (135-175)||(28531629-28531669)
chr6 (61-145)||(33828618-33828701)
chr6 (136-176)||(34544539-34544579)
[»] chr2 (27 HSPs)
chr2 (94-166)||(17952748-17952820)
chr2 (94-176)||(10143113-10143195)
chr2 (93-166)||(656823-656896)
chr2 (117-166)||(33192144-33192193)
chr2 (115-176)||(40837496-40837557)
chr2 (112-176)||(3673748-3673812)
chr2 (94-157)||(11513858-11513921)
chr2 (94-173)||(28803553-28803632)
chr2 (123-166)||(32098384-32098427)
chr2 (119-177)||(3458597-3458655)
chr2 (93-159)||(14666506-14666572)
chr2 (123-173)||(29633016-29633066)
chr2 (112-166)||(37053545-37053599)
chr2 (16-158)||(40145421-40145563)
chr2 (94-175)||(5511507-5511588)
chr2 (123-176)||(15171191-15171244)
chr2 (119-176)||(25609737-25609794)
chr2 (119-176)||(25790067-25790124)
chr2 (135-176)||(33576682-33576723)
chr2 (118-167)||(42817447-42817496)
chr2 (139-176)||(43163485-43163522)
chr2 (94-175)||(43199356-43199437)
chr2 (134-166)||(1494506-1494538)
chr2 (120-176)||(13630354-13630410)
chr2 (140-176)||(26522717-26522753)
chr2 (94-166)||(34054948-34055020)
chr2 (60-88)||(37845368-37845396)
[»] scaffold0549 (2 HSPs)
scaffold0549 (95-163)||(1772-1840)
scaffold0549 (95-163)||(3862-3930)
[»] scaffold0590 (1 HSPs)
scaffold0590 (135-176)||(1162-1203)
[»] scaffold0275 (1 HSPs)
scaffold0275 (135-176)||(2772-2813)


Alignment Details
Target: chr7 (Bit Score: 159; Significance: 8e-85; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 1418530 - 1418355
Alignment:
Q  16 cacttatgaggctgtttgtgagagcttatagaaacagtttacaccatgtccataaactattttcagcttattttcgtagatagtttatgaaaccatctta 115  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1418530 cacttatgaggctgtttgtgagagcttatagaaaca--ttacaccatgtccataaactattttcagcttattttcgttgatagtttatgaaaccatctta 1418433  T
Q  116 caacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatgagacaggatccgttga 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1418432 caacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatgagtcaggatccgttga 1418355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 39591535 - 39591593
Alignment:
Q  115 acaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattata 173  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||    
T  39591535 acaacttatatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 30456496 - 30456569
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||||| |  |||| ||||||||||||||||  ||||||||||| ||||||||||| ||||||||    
T  30456496 agatagtttatgaaaaccacttataacttatatgaaaacaatttgactttattttatcttttgttttagaaata 30456569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 30751619 - 30751566
Alignment:
Q  27 ctgtttgtgagagcttatagaaacagtttacaccatgtccataaactattttca 80  Q
    ||||||| |||||||||||||||||||||| | |||||||||||||| ||||||    
T  30751619 ctgtttgggagagcttatagaaacagtttatagcatgtccataaactgttttca 30751566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 35536112 - 35536048
Alignment:
Q  112 cttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||| ||||||||||||||||  ||||||||||| |||||| |||||||||||||  ||||||||    
T  35536112 cttataacttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacat 35536048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 9527163 - 9527205
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttataga 162  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  9527163 ttatatgaaaacagtttgactttattatatcttttgttataga 9527205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 34754856 - 34754926
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    |||||||||||||| || |||||  |||||||||| |||| |||||||||   ||||||||||||||||||    
T  34754856 gatagtttatgaaaacaacttacggcttatatgaagacattttgactttacagtatcttttgttatagaaa 34754926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 48157085 - 48157151
Alignment:
Q  22 tgaggctgtttgtgagagcttatagaaacagtttacaccatgtccataaactattttcagcttattt 88  Q
    |||| ||||||| |||||||||||||||||  |||  |||||||||||| || ||||||||||||||    
T  48157085 tgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttattt 48157151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 1417262 - 1417205
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  ||||||||||| |||||||||||||| |||||  ||||||||    
T  1417262 cttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacat 1417205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 5006581 - 5006638
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  ||||||||||| ||||||||||||||| ||||  ||||||||    
T  5006581 cttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacat 5006638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 25511625 - 25511569
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattataca 175  Q
    ||||||| |||| | ||||||||||||  |||||||||||||||||||| |||||||    
T  25511625 cttatataaaaaaaaattgactttatttcatcttttgttatagaaataatttataca 25511569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 28178963 - 28178907
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttatagaaataaattatacatgag 179  Q
    ||||||||||   |||||||||| ||||||||||||||||||||  |||||||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacatgag 28178907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 1417000 - 1416965
Alignment:
Q  191 tgaattgtcgtagcttaaagtttttaataagcaact 226  Q
    |||||||||||||||||||||||| |||||||||||    
T  1417000 tgaattgtcgtagcttaaagttttcaataagcaact 1416965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 7453454 - 7453529
Alignment:
Q  104 gaaaccatcttacaacttatatgaaaacatatt-gactttattatatcttttgttatagaaataaattatacatga 178  Q
    |||| ||||||| | |||||||||||||| ||| ||||||||| ||||||||| |||||||| |  ||||||||||    
T  7453454 gaaaacatcttatagcttatatgaaaacaaatttgactttattttatcttttgctatagaaaaatcttatacatga 7453529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 7623162 - 7623079
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||||||  | |||||| ||||||| |||| |  | ||||||||| || ||||||||||| |||||| ||||||||    
T  7623162 agatagtttatgaaaatagcttacagcttatataaaaagagttggactttattttaccttttgttataaaaataacttatacat 7623079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 8680992 - 8680933
Alignment:
Q  117 aacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| |||||||| |  |||||||||||||||||||||||| | |||||| ||||||||    
T  8680992 aacttgtatgaaaataatttgactttattatatcttttgttacaaaaataacttatacat 8680933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 27492819 - 27492736
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||| |||||||| |||||||  ||||||||||||| |  |||| ||||||  | |||||||||||||||||  ||||||||    
T  27492819 agatagcttatgaaaacatcttattacttatatgaaaaaagtttgattttatttgaacttttgttatagaaatagtttatacat 27492736  T

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Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 39551620 - 39551667
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||||  || |||||| ||||||||||||||||||||||    
T  39551620 cttatatgaaaacagttttactttagtatatcttttgttatagaaata 39551667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 45593789 - 45593848
Alignment:
Q  117 aacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||||  ||||||||||| ||| |||||||| |||||||  ||||||||    
T  45593789 aacttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacat 45593848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 44151526 - 44151592
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttat 159  Q
    ||||||||||||||| || |||| | |||||||| |||||  || |||||||| |||||||||||||    
T  44151526 agatagtttatgaaaacaacttatagcttatatggaaacagttttactttattctatcttttgttat 44151592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 45813253 - 45813299
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||||  ||||||||||| ||||||||| ||||||||||    
T  45813253 ttatatgaaaacaagttgactttattttatcttttggtatagaaata 45813299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 176
Target Start/End: Complemental strand, 2013169 - 2013140
Alignment:
Q  147 tatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||||||||||||||||||    
T  2013169 tatcttttgttatagaaataaattatacat 2013140  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 23918955 - 23918898
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  ||||||||||| |||||||||| ||||| |||| ||| ||||    
T  23918955 cttatatgaaaacaatttgactttattttatcttttgtaatagagataacttacacat 23918898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 27121658 - 27121715
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  ||||||||||| |||| ||| |||||||||||  ||||||||    
T  27121658 cttatatgaaaacaatttgactttattttatcatttattatagaaatatcttatacat 27121715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 28165089 - 28165032
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||| ||||||  ||||||| ||| |||||||||||||||||| || ||||||||    
T  28165089 cttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacat 28165032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 33894620 - 33894564
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  ||||||| ||| ||||||||||||||||||||  ||||||||    
T  33894620 cttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacat 33894564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 44239056 - 44239093
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttata 160  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  44239056 tatgaaaacattttgactttattttatcttttgttata 44239093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 48157192 - 48157249
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||| ||||||  || |||||||| |||||||| |||||||||||| ||||||||    
T  48157192 cttatattaaaacaatttcactttattttatcttttattatagaaataagttatacat 48157249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 1432060 - 1432096
Alignment:
Q  140 tttattatatcttttgttatagaaataaattatacat 176  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  1432060 tttattttatcttttgttatagaaataacttatacat 1432096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 10079298 - 10079334
Alignment:
Q  16 cacttatgaggctgtttgtgagagcttatagaaacag 52  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  10079298 cacttatgaggttgtttgggagagcttatagaaacag 10079334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 12835012 - 12835056
Alignment:
Q  122 atatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||  ||||||||||| ||||||||||| ||||||||    
T  12835012 atatgaaaacaatttgactttattttatcttttgttgtagaaata 12835056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 30496701 - 30496645
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| |||||||  ||||||||||| ||| ||||||||||||||||  ||||||||    
T  30496701 ttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacat 30496645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 31338531 - 31338471
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatctttt 154  Q
    ||||||||||| || || |||| ||||||||| ||||||  ||||||||||| ||||||||    
T  31338531 gatagtttatggaaacaacttataacttatataaaaacagtttgactttattttatctttt 31338471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 46825096 - 46825052
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaa 163  Q
    ||||||||||||||  ||||||||||| |||||||| ||||||||    
T  46825096 cttatatgaaaacaatttgactttattttatctttttttatagaa 46825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 47046180 - 47046228
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataa 167  Q
    ||||||||||||||  ||||||||||| |||| |||||| |||||||||    
T  47046180 cttatatgaaaacaatttgactttattttatcctttgttgtagaaataa 47046228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 27600 - 27517
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||| || |||| |  |||||||||||||  ||||||||||| |||||| |||||||||||||| ||||||||    
T  27600 agatagtttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacat 27517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 44119234 - 44119291
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||    
T  44119234 cttatatgaaaacatattgactttgttttatcttttgctatagaaataacttatacat 44119291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 49219163 - 49219082
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatac 174  Q
    ||||||||||||||| || |||| | |||||||||||| |  ||||||||||| ||| ||||||||||||||||| ||||||    
T  49219163 agatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatac 49219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 19422400 - 19422359
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  19422400 ttgactttattatatcttttgttatagaaataacttatacat 19422359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 10192307 - 10192235
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| || ||||| || |||| ||||||||||||||||  ||||||||||| |||||||||||||| |||||    
T  10192307 gatagcttttgaaaacaacttataacttatatgaaaacaatttgactttattctatcttttgttataaaaata 10192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 53626793 - 53626729
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    |||||||| || |||| | ||||||||||||||| |||| |||||| ||||||||||||||||||    
T  53626793 ttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaa 53626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 25434532 - 25434579
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  25434532 cttatatgaaaacatattgactttattttatcttttcttacagaaata 25434579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 24929513 - 24929444
Alignment:
Q  97 agtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||| || |||| | ||| ||||||||||  | ||||||||| ||||||||||||||||||||    
T  24929513 agtttatgaaaacaacttatagcttttatgaaaacagttagactttattttatcttttgttatagaaata 24929444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 30024698 - 30024645
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattat 172  Q
    ||||||||||||||  || |||||||| ||||||||||||||||||||| ||||    
T  30024698 cttatatgaaaacaattttactttattttatcttttgttatagaaataacttat 30024645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 30338664 - 30338721
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  || |||||||| ||||||||||||||||||||  ||||||||    
T  30338664 cttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacat 30338721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 18630703 - 18630631
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| || ||||| || |||| | |||||||||||||  |||||||||||| ||||||||||||| ||||||    
T  18630703 gatagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatcttttgttattgaaata 18630631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 54325109 - 54325165
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattataca 175  Q
    ||||||||||||||  ||||||||||| |||||||||| |||||||||  |||||||    
T  54325109 cttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttataca 54325165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 4071880 - 4071833
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||| |  ||||||||||| ||||||||||||||||||||    
T  4071880 cttatatgaaaataatttgactttattttatcttttgttatagaaata 4071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 46797035 - 46796976
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttat 159  Q
    |||||||| || |||| |||||||||| ||||||||||| |||||| |||| ||||||||    
T  46797035 ttatgaaaacaacttataacttatatggaaacatattgaatttattttatcgtttgttat 46796976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 54327521 - 54327576
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatac 174  Q
    ||||||||||||||  |||||||| || |||||||||||||||||| || ||||||    
T  54327521 cttatatgaaaacagtttgactttgttttatcttttgttatagaaacaacttatac 54327576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 31038932 - 31038998
Alignment:
Q  112 cttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatga 178  Q
    |||| ||||||||||||||||  ||||||||||| ||||| || || |||||||||  |||||||||    
T  31038932 cttataacttatatgaaaacaatttgactttattttatctattattgtagaaataacgtatacatga 31038998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 49803214 - 49803152
Alignment:
Q  114 tacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||| ||||||||  || |||| ||| ||||||||| ||||||||||| ||||||||    
T  49803214 tacaacttatgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacat 49803152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 3175974 - 3175905
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaa 163  Q
    ||||| |||||||| || |||| ||||||  ||||||||  ||||||||||| ||||||||| |||||||    
T  3175974 gatagcttatgaaaacagcttataacttacttgaaaacaatttgactttattttatcttttgctatagaa 3175905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 9319282 - 9319323
Alignment:
Q  134 attgactttattatatcttttgttatagaaataaattataca 175  Q
    |||||||||||| ||||||||||||||||||| | |||||||    
T  9319282 attgactttattctatcttttgttatagaaattacttataca 9319323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 32724117 - 32724060
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||| |  ||||||||||| |||||||||| ||||||||| |||| ||||    
T  32724117 cttatatgaaaatagtttgactttattttatcttttgtaatagaaatagattagacat 32724060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 44019522 - 44019474
Alignment:
Q  120 ttatatgaaaacatat--tgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||||||  |||||||||| |||||||| |||||||||||    
T  44019522 ttatatgaaaacatataatgactttattttatcttttcttatagaaata 44019474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 51044547 - 51044588
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  51044547 ttgactttattttatcttttgttatagaaatagcttatacat 51044588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 5131309 - 5131361
Alignment:
Q  124 atgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||| || |||||||| |||||||||||||| ||| || ||||||||    
T  5131309 atgaaaacattttaactttattttatcttttgttatataaacaacttatacat 5131361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 179
Target Start/End: Complemental strand, 17884090 - 17884006
Alignment:
Q  95 atagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatgag 179  Q
    |||| |||||||| || || | ||||||||  ||||||  || |||||||| ||||||||||||||||||||  ||| |||||||    
T  17884090 atagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttttgttatagaaatagcttacacatgag 17884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 19691425 - 19691349
Alignment:
Q  99 tttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattataca 175  Q
    ||||||||| || |||| || || ||||||||||  ||||||||||| || ||||| |||||||||||  |||||||    
T  19691425 tttatgaaatcaacttataatttctatgaaaacaggttgactttattttaacttttattatagaaatagcttataca 19691349  T

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Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 19702010 - 19701934
Alignment:
Q  99 tttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattataca 175  Q
    ||||||||| || |||| || || ||||||||||  ||||||||||| || ||||| |||||||||||  |||||||    
T  19702010 tttatgaaatcaacttataatttctatgaaaacaggttgactttattttaacttttattatagaaatagcttataca 19701934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 22684588 - 22684644
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattataca 175  Q
    ||||||||||||||  ||||||||||| || | |||||||||||||||  |||||||    
T  22684588 cttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttataca 22684644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 23815363 - 23815311
Alignment:
Q  124 atgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||  ||||| ||||| ||||||||||||||||||||| ||| ||||    
T  23815363 atgaaaacagtttgacattattttatcttttgttatagaaataacttaaacat 23815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 36734890 - 36734834
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| |  ||||||||||| || ||||||||||||||| | |||||||||    
T  36734890 ttatatgaaaatagtttgactttattttaccttttgttatagaaagagattatacat 36734834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 44319947 - 44319888
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatgag 179  Q
    ||||||||||||||  | ||||||||| |||||||| |||||||||||  |||||||||||    
T  44319947 cttatatgaaaacagttcgactttattttatctttt-ttatagaaatagtttatacatgag 44319888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 47800620 - 47800580
Alignment:
Q  127 aaaacatattgactttattatatcttttgttatagaaataa 167  Q
    ||||||| || |||||||| |||||||||||||||||||||    
T  47800620 aaaacattttaactttattttatcttttgttatagaaataa 47800580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 55870394 - 55870470
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||| || |||| | ||||| ||||||||  |||||||||||  ||||||||||||| ||||  |||||||||    
T  55870394 ttatgaaaacaacttatagcttatgtgaaaacagtttgactttatttgatcttttgttataaaaatggattatacat 55870470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 37063127 - 37063203
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| ||  ||||||||||||||| |  ||||||||||| ||||||||||||||||||||  ||||||||    
T  37063127 ttatgaaaccagctggcaacttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacat 37063203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 12407726 - 12407790
Alignment:
Q  112 cttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||| |||||| ||||||||| ||| |||||||| ||||||||||||||||||||  ||||||||    
T  12407726 cttataacttacatgaaaacagatttactttattttatcttttgttatagaaatagcttatacat 12407790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 14295529 - 14295457
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| ||| |||| || |||| | ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  14295529 gatagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaata 14295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 28586839 - 28586885
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||    
T  28586839 ttatatgaaaacagtttgactttattttatcttttgttatagaaata 28586885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 18704084 - 18704164
Alignment:
Q  95 atagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||| |||||||| || |||| | ||||||| |||| |  ||||||||||| ||||||||||||||||||||| ||||||||    
T  18704084 atagcttatgaaaacaacttatagcttatataaaaatagcttgactttatt-tatcttttgttatagaaataacttatacat 18704164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 29117002 - 29117059
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||| |||||||  ||||||||||| |||||||||||||||||||||  |||||||    
T  29117002 cttatacgaaaacagtttgactttattttatcttttgttatagaaataacatatacat 29117059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 35135734 - 35135791
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||| |  ||||||||||| ||||||||||||||||||||  ||||||||    
T  35135734 cttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacat 35135791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 4855721 - 4855649
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||||| || |||| ||||||||||| ||||  || |||||||| ||| |||||||||| |||||    
T  4855721 gatagtttatgaaaacaacttataacttatatgataacaatttaactttattttattttttgttataaaaata 4855649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 36639522 - 36639463
Alignment:
Q  117 aacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| ||||||||||| |||| |||||| |||||||||||||| | |||||||| ||||    
T  36639522 aacttgtatgaaaacattttgattttattttatcttttgttataaagataaattagacat 36639463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 10303794 - 10303752
Alignment:
Q  124 atgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||  ||||||||||| ||||||||||||||||||||    
T  10303794 atgaaaacaatttgactttattttatcttttgttatagaaata 10303752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 32172676 - 32172594
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| |||||||| || |||| | |||||||| |||||  ||||||| ||| ||||||||||| ||||||||  ||||||||    
T  32172676 gatagcttatgaaaacagcttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacat 32172594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 985631 - 985574
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| ||||||||  ||||||||||| ||||||||||||| |||||||  |||||||    
T  985631 cttatgtgaaaacagtttgactttattttatcttttgttatggaaataacatatacat 985574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 7096215 - 7096256
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  7096215 ttgactttattttatcttttgttatagaaatagcttatacat 7096256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 14257489 - 14257416
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||||| || |||| |||||||||| |||||| |||| |||||| | ||||| |  |||||||||    
T  14257489 agatagtttatgaaaacaccttataacttatatggaaacattttgaatttattttgtctttcgacatagaaata 14257416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 20982203 - 20982264
Alignment:
Q  115 acaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||| ||||||||||||   ||||||||||| |||| |||||||||||||||  ||||||||    
T  20982203 acaatttatatgaaaacgggttgactttattttatcctttgttatagaaatagcttatacat 20982264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 37690689 - 37690766
Alignment:
Q  99 tttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||| || |||| | ||||||||||||| | |||| || ||| |||||||| |||||||||||| || |||||    
T  37690689 tttatgaaaacaacttatagcttatatgaaaactttttgatttgattttatcttttattatagaaataacttttacat 37690766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 41981789 - 41981834
Alignment:
Q  128 aaacatattgactttattatatcttttgttatagaaataaattata 173  Q
    ||||||||| |||||||| ||||||||| ||||||||||| |||||    
T  41981789 aaacatattaactttattttatcttttgatatagaaataacttata 41981834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 912694 - 912774
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaaca-tattgactttattatatcttttgttatagaaataaattat 172  Q
    ||||||||||| ||| || ||||   |||||||||||||| | ||||||||||| ||| || |||||||||||||| ||||    
T  912694 agatagtttataaaaacaacttattgcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttat 912774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 12595793 - 12595857
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    ||||||||||| || | |  |||||||||||||  || |||||||| ||||||||||||||||||    
T  12595793 ttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 30585674 - 30585630
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaa 163  Q
    |||||||||||||| ||||| |||||| ||| |||||||||||||    
T  30585674 cttatatgaaaacagattgaatttattttatattttgttatagaa 30585630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 41277396 - 41277456
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttt 153  Q
    |||||| |||||||| || |||  ||||||||||||||||  ||||||||||| |||||||    
T  41277396 agatagcttatgaaaacaacttttaacttatatgaaaacagtttgactttattttatcttt 41277456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 42181095 - 42181123
Alignment:
Q  60 catgtccataaactattttcagcttattt 88  Q
    |||||||||||||||||||||||||||||    
T  42181095 catgtccataaactattttcagcttattt 42181123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 49517087 - 49517012
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattataca 175  Q
    |||||||| || |||| | |||| |||||||||  ||||||||||| ||||||||||||||||||||| |||||||    
T  49517087 ttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 15360892 - 15360835
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||| | ||||||    
T  15360892 cttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacat 15360835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 165
Target Start/End: Original strand, 1879099 - 1879145
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaat 165  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  1879099 cttatatgaaaacattttgactttattttatcttctgttatagaaat 1879145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 4200227 - 4200173
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattata 173  Q
    ||||||||||||||  ||||||||||| |||||||||||||| |||||| |||||    
T  4200227 cttatatgaaaacaacttgactttattttatcttttgttataaaaataacttata 4200173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 50319286 - 50319233
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||  ||||||||    
T  50319286 tatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacat 50319233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 7273988 - 7274068
Alignment:
Q  96 tagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||| || || |||| ||||| ||||||||||  |||||||||||  ||||||||||||| ||||||  |||||||    
T  7273988 tagtttatggaaacagcttataacttgtatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacat 7274068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 14737781 - 14737825
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttatagaaataa 167  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaataa 14737825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 45999360 - 45999420
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatgag 179  Q
    ||||||||||| ||  ||||||||||  ||||||||||||||||||||  |||||||||||    
T  45999360 cttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacatgag 45999420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 4202125 - 4202187
Alignment:
Q  30 tttgtgagagcttatagaaacagtttacaccatgtccataaactattttcagcttattttcgta 93  Q
    |||| ||||||||||| |||||| |||   ||||||||||| ||||||||||||||||||||||    
T  4202125 tttgagagagcttata-aaacagcttatgacatgtccataagctattttcagcttattttcgta 4202187  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 7218121 - 7218200
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattata 173  Q
    ||||| |||||||| || |||| | ||||||||||||||  ||||||||||| || ||||| |||| |||||| ||||||    
T  7218121 gataggttatgaaaacaacttatagcttatatgaaaacaatttgactttattttaccttttattatggaaatagattata 7218200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 23373366 - 23373409
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||    
T  23373366 tatgaaaacagattgactttattttatcttttgatatagaaata 23373409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 36151575 - 36151634
Alignment:
Q  117 aacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||| |||||||  ||||||||||| ||||||||||||| ||||||  ||||||||    
T  36151575 aacttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacat 36151634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 17269273 - 17269191
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| |||||||| || ||||   ||||||||||||||  ||||||||||| |  |||||||| ||||||||| ||||||||    
T  17269273 gatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacat 17269191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 36641857 - 36641819
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattata 173  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  36641857 ttgactttattttatcttttgttatagaaataacttata 36641819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 40304107 - 40304173
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||| || |||| ||||||||||||||||   ||| |||||| |||||||||||||| |||||    
T  40304107 ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatcttttgttatataaata 40304173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 51695541 - 51695614
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataa 167  Q
    |||||| |||||||| ||||| | |||||||| ||||||| ||| |||||||| ||||||||  |||||||||||    
T  51695541 agatagcttatgaaaacatctgataacttatacgaaaaca-atttactttattttatcttttactatagaaataa 51695614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 871043 - 870986
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||| | |||||||| ||| |||||||||||||| |||||  ||||||||    
T  871043 cttatatgaaaaaaaattgacttaattttatcttttgttataaaaatagtttatacat 870986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 27738252 - 27738297
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    ||||||||||||||  ||||||||||| ||||||||||| ||||||    
T  27738252 cttatatgaaaacaatttgactttattttatcttttgttgtagaaa 27738297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 30285915 - 30285842
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||||| ||   || || |||||||||||   |||||||||||| || |||||||||||||||||    
T  30285915 agatagtttatgaaaacaaagtaaaatttatatgaaaattgattgactttattttaacttttgttatagaaata 30285842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 33975636 - 33975607
Alignment:
Q  61 atgtccataaactattttcagcttattttc 90  Q
    ||||||||||||||||||||||||||||||    
T  33975636 atgtccataaactattttcagcttattttc 33975607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 37272633 - 37272694
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttg 155  Q
    |||| ||||||||| || |||| | |||||||||||||| |||||||||||| || ||||||    
T  37272633 gataatttatgaaaacagcttatagcttatatgaaaacagattgactttattttaccttttg 37272694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 38867907 - 38867952
Alignment:
Q  121 tatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||| |||||||||||  |||||||| ||||||||||    
T  38867907 tatatgaaaacattttgactttatttaatcttttggtatagaaata 38867952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 44032071 - 44032116
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    ||||||||||||||  ||||||||||| || |||||||||||||||    
T  44032071 cttatatgaaaacaatttgactttattttagcttttgttatagaaa 44032116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 45327601 - 45327548
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||||||||| || | || |||||||||||||||||  ||||||||    
T  45327601 tatgaaaacatattgactctaatttaccttttgttatagaaatatcttatacat 45327548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 48830148 - 48830205
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||| |  ||||||||||| ||||||| || |||||||||| ||||||||    
T  48830148 cttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacat 48830205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 49557120 - 49557083
Alignment:
Q  138 actttattatatcttttgttatagaaataaattataca 175  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  49557120 actttattttatcttttgttatagaaataacttataca 49557083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 6279510 - 6279438
Alignment:
Q  16 cacttatgaggctgtttgtgagagcttatagaaacagtttacaccatgtccataaactattttcagcttattt 88  Q
    ||||| || ||||||||| |||||||||| ||||||||| ||  |||||||||||  | |||||||| |||||    
T  6279510 cacttgtgtggctgtttgagagagcttatggaaacagttaaccacatgtccataagttgttttcagcgtattt 6279438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 30257706 - 30257646
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatctttt 154  Q
    |||||||||||||| || |||| | |||||||| |||||  ||||||||||| ||||||||    
T  30257706 gatagtttatgaaaacaacttaaagcttatatggaaacagtttgactttattttatctttt 30257646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 30371165 - 30371105
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttata 160  Q
    |||||||| || |||| | ||||||||||||||  |||| |||||| ||||||||||||||    
T  30371165 ttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatcttttgttata 30371105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 34179919 - 34179987
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttataga 162  Q
    |||||||||||||| ||  ||| | |||| || ||||||  ||||||||||| ||||||||||||||||    
T  34179919 gatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatcttttgttataga 34179987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 44936662 - 44936710
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataa 167  Q
    |||||||||||| |  ||||||||||  |||||||||||||||||||||    
T  44936662 cttatatgaaaatagtttgactttatcttatcttttgttatagaaataa 44936710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 52559916 - 52559960
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacatgag 179  Q
    ||||||||||| ||| |||||||||||| |||| |||||||||||    
T  52559916 ttgactttattttatattttgttatagatataatttatacatgag 52559960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 9822 - 9904
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| |||||||| || | || ||||||||||||||| | ||||||| ||| ||| ||||||||||||||||| ||||||||    
T  9822 gatagattatgaaaacaacctataacttatatgaaaactttttgacttaattttattttttgttatagaaataacttatacat 9904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 29699268 - 29699195
Alignment:
Q  103 tgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| || |||| |||||| |||| ||||| ||||||||||| ||||||||||||||||||||| || |||||    
T  29699268 tgaaaacagcttataacttagatgacaacattttgactttattttatcttttgttatagaaataacttgtacat 29699195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 44348485 - 44348438
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  44348485 cttatatgaaaatattttgactttattacatcttttgttatagaaata 44348438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 2100807 - 2100758
Alignment:
Q  115 acaacttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    |||||||||||||||| || ||||||||||| ||||||||| ||||||||    
T  2100807 acaacttatatgaaaatattttgactttattttatcttttgctatagaaa 2100758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 5071020 - 5071096
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||| |||||||||| ||||||||||| |  ||||||||||| ||| ||||  |||||||| || ||||||||    
T  5071020 ttatgaaaacatcttacaagttatatgaaaaaagtttgactttattttatattttactatagaaacaacttatacat 5071096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 10437908 - 10437837
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaat 165  Q
    |||||| ||||||||||  |||| | ||||||| ||||||  ||||||||||| |||||||||||||||||||    
T  10437908 agatagcttatgaaacctacttaaagcttatat-aaaacagtttgactttattttatcttttgttatagaaat 10437837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 25867084 - 25867037
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||| || |||||||||||  |||||||||||||||||||    
T  25867084 cttatatgaaaatattttgactttatttcatcttttgttatagaaata 25867037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 26820181 - 26820142
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatac 174  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  26820181 ttgactttattttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 29056061 - 29056120
Alignment:
Q  117 aacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||||||| |||||||||||| ||||||||| | ||||| ||  ||||||||    
T  29056061 aacttatatgaaaacaaattgactttattttatcttttgctctagaagtagcttatacat 29056120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 31915331 - 31915398
Alignment:
Q  109 catcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||| | ||| ||||||||||  ||||||||||| |||||||||||||||| |||  ||||||||    
T  31915331 catcttataccttgtatgaaaacaatttgactttattctatcttttgttatagatatagcttatacat 31915398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 40728506 - 40728549
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacatga 178  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||    
T  40728506 ttgactttattttatcttttgttatagaaataacttatgcatga 40728549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 1470903 - 1470985
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| |||||||| || |||| | |||||||||||  |  ||||||||||| |||||||| |||||||||||  ||||||||    
T  1470903 gataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 5088944 - 5088891
Alignment:
Q  35 gagagcttatagaaacagtttacaccatgtccataaactattttcagcttattt 88  Q
    |||||||||| ||||||||||| | ||||||||||| || |||||| |||||||    
T  5088944 gagagcttatggaaacagtttataacatgtccataagctgttttcaacttattt 5088891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 6509273 - 6509334
Alignment:
Q  27 ctgtttgtgagagcttatagaaacagtttacaccatgtccataaactattttcagcttattt 88  Q
    ||||||| |||||||||||||||||| |||   |||| | |||||||||||||| |||||||    
T  6509273 ctgtttgagagagcttatagaaacagcttatgacatgcctataaactattttcaccttattt 6509334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 164
Target Start/End: Complemental strand, 7853388 - 7853359
Alignment:
Q  135 ttgactttattatatcttttgttatagaaa 164  Q
    ||||||||||||||||||||||||||||||    
T  7853388 ttgactttattatatcttttgttatagaaa 7853359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 11795114 - 11795045
Alignment:
Q  95 atagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    |||| |||||||| || |||| ||||||||||||||||   |||||||||| ||| |||||| |||||||    
T  11795114 atagcttatgaaatcagcttataacttatatgaaaacagtgtgactttattgtatgttttgtcatagaaa 11795045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 12361209 - 12361136
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattata 173  Q
    |||||||| || |||| | ||||||||||||||  ||||||| ||| |||||||  |||||||||||| |||||    
T  12361209 ttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatctttatttatagaaataacttata 12361136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 14482184 - 14482143
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  14482184 ttgactttattttatcttttgttatagaaatagtttatacat 14482143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 28784841 - 28784914
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||| ||||||||  | ||||||||| |||| ||||||  ||||||||||| |||||||| || ||||||||    
T  28784841 agatagcttatgaaaatagcttacaactgatatcaaaacaatttgactttattttatcttttattttagaaata 28784914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 39392749 - 39392790
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  39392749 ttgactttattttatcttttgttatagaaatagtttatacat 39392790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 8799387 - 8799355
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataa 167  Q
    ||||||||||| |||||||||||||||||||||    
T  8799387 ttgactttattttatcttttgttatagaaataa 8799355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 34770915 - 34770843
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| |||||||| || |||| | |||| |||||||||  ||||||||||| |||||||||| || ||||||    
T  34770915 gatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttgtaatggaaata 34770843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 42597394 - 42597342
Alignment:
Q  124 atgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||  || |||||||| ||||||||||||||||||||  ||||||||    
T  42597394 atgaaaacaattttactttattttatcttttgttatagaaatagcttatacat 42597342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 22232849 - 22232764
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatgag 179  Q
    ||||| ||||||||  | ||||| |||||||||||||||  ||||||||||| |||| ||||||||| |||||  |||||||||||    
T  22232849 gatagcttatgaaaatagcttacgacttatatgaaaacagtttgactttattttatcatttgttatataaatagcttatacatgag 22232764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 905042 - 905089
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  905042 cttatatgcaaacaaattgactttattttatcttttgttatagaaata 905089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 49586988 - 49587035
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  49586988 cttatatgaaaacagtttgactttattttatcttttgttatagaaata 49587035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 1395669 - 1395612
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||| |  ||||||||||| ||||||||||||||||||||  ||||||||    
T  1395669 cttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacat 1395612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 10101548 - 10101601
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattat 172  Q
    ||||||||||||||  || |||||||| ||||||||||||||||||||| ||||    
T  10101548 cttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 10212473 - 10212526
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattat 172  Q
    ||||||||||||||  || |||||||| ||||||||||||||||||||| ||||    
T  10212473 cttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 33405213 - 33405286
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||| |||||||| || |||| | |||||||||||||| ||| |||||||| || |||||| ||||||||||    
T  33405213 agatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaata 33405286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 41028923 - 41028980
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| |||||||| |||||||||||| | ||||||||||||||||||  ||||||||    
T  41028923 cttatttgaaaacagattgactttattttttcttttgttatagaaatagcttatacat 41028980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 48364956 - 48365008
Alignment:
Q  124 atgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||| ||||||||    
T  48364956 atgaaaacaatttgactttattttatcttttgttatcgaaataacttatacat 48365008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 49254779 - 49254707
Alignment:
Q  95 atagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataa 167  Q
    ||||||||||||| |||||||  | ||||| |||||| | ||||| ||||| ||||||||||||| |||||||    
T  49254779 atagtttatgaaaacatcttatcagttatacgaaaaccttttgacattattttatcttttgttattgaaataa 49254707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 53736181 - 53736233
Alignment:
Q  115 acaacttatatgaaaacatattgactttattatatcttttgttatagaaataa 167  Q
    |||||||||||||||| |  ||||| ||||| |||||||||||||||||||||    
T  53736181 acaacttatatgaaaatagtttgacattattttatcttttgttatagaaataa 53736233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Complemental strand, 33883007 - 33882968
Alignment:
Q  138 actttattatatcttttgttatagaaataaattatacatg 177  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  33883007 actttattttatcttttgttatagaaataatttatacatg 33882968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 42038987 - 42038940
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||||   |||||||||||| |||||||||||||||||||    
T  42038987 cttatatgaaaacggtttgactttattagatcttttgttatagaaata 42038940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 15304420 - 15304466
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||||  || |||||||| ||||||||||||||||||||    
T  15304420 ttatatgaaaacaatttaactttattttatcttttgttatagaaata 15304466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 27792895 - 27792813
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||||| || ||| || |||||||||||| |  ||||| ||||| ||||||||||| | ||||||  ||||||||    
T  27792895 gatagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacat 27792813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 34954080 - 34954034
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||||||  ||||||||||| |||||| |||||||||||||    
T  34954080 ttatatgaaaacagcttgactttattttatcttgtgttatagaaata 34954034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 49465909 - 49465967
Alignment:
Q  30 tttgtgagagcttatagaaacagtttacaccatgtccataaactattttcagcttattt 88  Q
    ||||||||||||||||||||||  |||   ||||||||| ||||||||||| |||||||    
T  49465909 tttgtgagagcttatagaaacaacttatgacatgtccatgaactattttcaacttattt 49465967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 3365429 - 3365356
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||| |||||||| ||  |||||| |||||| ||||||  ||||||| ||| |||||| |||||||||||||    
T  3365429 agatagcttatgaaaacagtttacaatttatataaaaacaacttgacttaattttatcttatgttatagaaata 3365356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 20669177 - 20669120
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||| ||||| ||||||||||| ||| | ||||||||||||||  ||||||||    
T  20669177 cttatatgacaacattttgactttattgtatatcttgttatagaaatagcttatacat 20669120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 23793586 - 23793545
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttata 160  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||    
T  23793586 cttatatgaaatcattttgactttattttatcttttgttata 23793545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 24605104 - 24605145
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||  |||||||||||||||||||| ||||||||    
T  24605104 ttgactttatttcatcttttgttatagaaataacttatacat 24605145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 26990730 - 26990685
Alignment:
Q  121 tatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||| |  ||||||||||| ||||||||||||||||||||    
T  26990730 tatatgaaaagaatttgactttattttatcttttgttatagaaata 26990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 38462277 - 38462232
Alignment:
Q  121 tatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||  ||||||||||| ||||||||| ||||||||||    
T  38462277 tatatgaaaacagtttgactttattttatcttttggtatagaaata 38462232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 40122828 - 40122881
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||  ||||||||||| ||||||||||||| ||||||  ||||||||    
T  40122828 tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacat 40122881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 42809299 - 42809242
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  || ||| |||| ||||||||||||||||||||  ||||||||    
T  42809299 cttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 20192679 - 20192735
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||   ||||||||||| |||||||||||||| |||||  ||||||||    
T  20192679 ttatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacat 20192735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 22214754 - 22214810
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||| |||  || |||||||| |||| |||||||||||||||| ||||||||    
T  22214754 ttatatgaatacaatttcactttattttatcctttgttatagaaataatttatacat 22214810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 24235771 - 24235811
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattataca 175  Q
    ||||||||||  ||||||||||||||||||||| |||||||    
T  24235771 ttgactttatattatcttttgttatagaaataacttataca 24235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 24887330 - 24887402
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| |||||||| || |||  | |||||||||| |||  ||||||||||| ||||| ||||||||||||||    
T  24887330 gatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatctattgttatagaaata 24887402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 25129827 - 25129771
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||| ||  ||||||||||| ||||||||| ||||| ||||| ||||||||    
T  25129827 ttatatgaaagcagtttgactttattgtatcttttggtataggaataagttatacat 25129771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 36646429 - 36646501
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| |||||||| ||  ||| ||||||||||||||||  |  |||||||| |||||||||| |||||||||    
T  36646429 gatagcttatgaaaacaagttataacttatatgaaaacaattatactttattttatcttttgtcatagaaata 36646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 54775110 - 54775078
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataa 167  Q
    ||||||||||| |||||||||||||||||||||    
T  54775110 ttgactttattttatcttttgttatagaaataa 54775078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 24836272 - 24836328
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| |||||||  ||||||||||| ||||||||||||||||||||| ||||||||    
T  24836272 ttatacgaaaacaatttgactttattttatcttttgttatagaaataacttatacat 24836328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 34538177 - 34538249
Alignment:
Q  16 cacttatgaggctgtttgtgagagcttatagaaacagtttacaccatgtccataaactattttcagcttattt 88  Q
    ||||| |||| || |||| |||| |||||| |||||| ||||  |||||||||||||||||||||||||||||    
T  34538177 cacttgtgagactatttgagagatcttataaaaacagcttacgacatgtccataaactattttcagcttattt 34538249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 29940800 - 29940749
Alignment:
Q  113 ttacaacttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    ||||| |||| ||||||||| |||||||||||| ||||||||||||||||||    
T  29940800 ttacagcttaaatgaaaacaaattgactttattttatcttttgttatagaaa 29940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 29274301 - 29274358
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  ||||||||||| ||||||||| ||||||||||  ||||||||    
T  29274301 cttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacat 29274358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 281895 - 281967
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| |||||||  || |||| | ||||||||||||||  ||||||||||| ||||||||||||||| ||||    
T  281895 gatagcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgttataggaata 281967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 4006737 - 4006665
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| |||||||| || |||| | ||||||| ||||||  ||||||||||| |||| |||||||||||||||    
T  4006737 gatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaata 4006665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 7354227 - 7354143
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatga 178  Q
    |||||||||||||| || |||  | |||||||||||| |  | || |||||| ||||||||||||||||||||  ||||||||||    
T  7354227 gatagtttatgaaaacagcttgtatcttatatgaaaatagttcgattttattttatcttttgttatagaaatagtttatacatga 7354143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 11340673 - 11340741
Alignment:
Q  95 atagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaa 163  Q
    |||| ||||||||||| |||| | | |||||||||| | ||| |||||||| |||||||||||||||||    
T  11340673 atagcttatgaaaccaacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaa 11340741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 24782082 - 24782010
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||||| |||  | |||| ||||||||||||||||  |||| || ||| ||||||||||||||||||||    
T  24782082 gatagtttattaaagtagcttataacttatatgaaaacaatttgatttgattttatcttttgttatagaaata 24782010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 33787798 - 33787874
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||| || |||| ||||||||||||| ||  |||||||| || ||| ||||||||||||||||  ||||||||    
T  33787798 ttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaatagtttatacat 33787874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 4247114 - 4247197
Alignment:
Q  100 ttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatgagacag 183  Q
    |||||||| || |||| |||||||||||||||| |   ||| |||| ||||||||||||||||||||  ||| |||||| ||||    
T  4247114 ttatgaaaacagcttataacttatatgaaaacagaccaactctattttatcttttgttatagaaatagcttacacatgaaacag 4247197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 21959726 - 21959679
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||||| ||||| |||||||||||| ||||||||||||| ||||||    
T  21959726 cttatatgcaaacaaattgactttattttatcttttgttatggaaata 21959679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 507199 - 507161
Alignment:
Q  138 actttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  507199 actttattttatcttttgttatagaaataatttatacat 507161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 1498005 - 1497943
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttg 155  Q
    ||||||||||||||| | ||||| |||| |||||||||||  ||||||||||| || ||||||    
T  1498005 agatagtttatgaaaacttcttataactcatatgaaaacagtttgactttattttaccttttg 1497943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 20671912 - 20671994
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||||| ||  ||| | |||||| |||||||  ||||||||||| ||||||||| | ||||||||  ||||||||    
T  20671912 gatagtttatgaaaacaatttaaagcttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacat 20671994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 30537019 - 30537065
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||| ||| | |||||| ||||||||||||||||||||    
T  30537019 ttatatgaaaacaaattaattttattttatcttttgttatagaaata 30537065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 33068633 - 33068690
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| ||||||||  ||||  ||||| ||||||||||||||||||||| ||||||||    
T  33068633 cttatttgaaaacagtttgatattattttatcttttgttatagaaataacttatacat 33068690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 283162 - 283134
Alignment:
Q  60 catgtccataaactattttcagcttattt 88  Q
    |||||||||||||||||||||||||||||    
T  283162 catgtccataaactattttcagcttattt 283134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 1403019 - 1402947
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| |||||||| ||  ||| | |||||||||||| |  || |||||||| ||||||||||||||||||||    
T  1403019 gatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaata 1402947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 5328956 - 5328924
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataa 167  Q
    ||||||||||| |||||||||||||||||||||    
T  5328956 ttgactttattttatcttttgttatagaaataa 5328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 7714023 - 7713983
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttat 159  Q
    ||||||||||||||  ||||||||||| |||||||||||||    
T  7714023 cttatatgaaaacaatttgactttattttatcttttgttat 7713983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 8420156 - 8420228
Alignment:
Q  16 cacttatgaggctgtttgtgagagcttatagaaacagtttacaccatgtccataaactattttcagcttattt 88  Q
    ||||| |||| ||||| ||||||||||||||||| || |||   |||||||| || ||||||||| |||||||    
T  8420156 cacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttattt 8420228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 10154226 - 10154174
Alignment:
Q  112 cttacaacttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    |||| ||||||||||||||||  ||||||||||| ||||||||  ||||||||    
T  10154226 cttataacttatatgaaaacagtttgactttattttatctttttctatagaaa 10154174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 27595632 - 27595684
Alignment:
Q  112 cttacaacttatatgaaaacatattgactttattatatcttttgttatagaaa 164  Q
    |||||| |||||||||||| |  ||||||||||| |||||||| |||||||||    
T  27595632 cttacagcttatatgaaaataatttgactttattttatcttttattatagaaa 27595684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 28531629 - 28531669
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattataca 175  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  28531629 ttgactttattttatcttttgttatataaataacttataca 28531669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 33828701 - 33828618
Alignment:
Q  61 atgtccataaactattttcagcttattttcgtagatagtttatgaaaccatcttacaacttatatgaaaacatattgactttatt 145  Q
    ||||||||||||||||| || ||||||| | | ||||| |||| ||| || |||| |||||||| |||||||  |||||||||||    
T  33828701 atgtccataaactatttacatcttatttccat-gatagcttattaaaacaacttataacttatacgaaaacaatttgactttatt 33828618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 34544539 - 34544579
Alignment:
Q  136 tgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||| | ||||||||||||||||||||| ||||||||    
T  34544539 tgactttagtttatcttttgttatagaaataacttatacat 34544579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 17952748 - 17952820
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| |||||||| ||||||  | |||||||||||| |  ||||||||||| ||||||||||||||||||||    
T  17952748 gatagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaata 17952820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 10143195 - 10143113
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| ||||||||  | |||| | ||||||| ||||||  ||||||| ||| ||||||||||||||||||||| ||||||||    
T  10143195 gatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacat 10143113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 656823 - 656896
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||||| |||||||| || |||||| |||||| |||||||  |||| | |||| ||||||||||||||||||||    
T  656823 agatagcttatgaaatcaacttacagcttatacgaaaacaatttgattatattttatcttttgttatagaaata 656896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 33192193 - 33192144
Alignment:
Q  117 aacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||||||  ||||||||||| |||||| |||||||||||||    
T  33192193 aacttatatgaaaacagtttgactttattttatcttatgttatagaaata 33192144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 40837496 - 40837557
Alignment:
Q  115 acaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||| ||||||||||||  ||||||||| | ||||||||||||||||||||  ||||||||    
T  40837496 acaacatatatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 3673812 - 3673748
Alignment:
Q  112 cttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||| ||||||||||||||||  || |||||||| ||| ||||||||||||||||| | ||||||    
T  3673812 cttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacat 3673748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 11513921 - 11513858
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgtt 157  Q
    ||||| |||||||| || |||| | ||||||||||||||  ||||||||||| |||||||||||    
T  11513921 gatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgtt 11513858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 28803553 - 28803632
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattata 173  Q
    ||||||||| |||| || |||  | ||||||||||| ||  ||||||||||| ||||||||||||| ||||||| |||||    
T  28803553 gatagtttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttata 28803632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 32098384 - 32098427
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||    
T  32098384 tatgaaaacactttgactttattttatcttttgttatagaaata 32098427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 3458655 - 3458597
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacatg 177  Q
    |||||||||||| |  ||||||||||| |||||||||||||| |||||| ||| |||||    
T  3458655 cttatatgaaaaaagtttgactttattttatcttttgttataaaaataacttagacatg 3458597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 14666572 - 14666506
Alignment:
Q  93 agatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttat 159  Q
    |||||| || ||||| || |||| ||||||||||||| ||  ||||||||||| |||||||||||||    
T  14666572 agatagcttgtgaaaacaacttataacttatatgaaatcagtttgactttattttatcttttgttat 14666506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 29633066 - 29633016
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttatagaaataaattata 173  Q
    ||||||||||  ||||||||||| ||| ||||||||||||||||| |||||    
T  29633066 tatgaaaacaatttgactttattctattttttgttatagaaataacttata 29633016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 37053599 - 37053545
Alignment:
Q  112 cttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    |||| ||||||||||||||||  ||||||||||| ||| || |||||||||||||    
T  37053599 cttataacttatatgaaaacagtttgactttattttattttctgttatagaaata 37053545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 40145563 - 40145421
Alignment:
Q  16 cacttatgaggctgtttgtgagagcttatagaaacagtttacaccatgtccataaactattttcagcttattttcgtagatagtttatgaaaccatctta 115  Q
    ||||||||||  |||||| |||| ||||| ||||||  ||| | |||  ||||||| | ||||| ||||||||    ||| || |||||||| || ||||    
T  40145563 cacttatgagcttgtttgagagaacttatcgaaacaacttataacataaccataaattgttttccgcttatttctccagaaagcttatgaaaacaactta 40145464  T
Q  116 caacttatatgaaaacatattgactttattatatcttttgtta 158  Q
     |||||| || ||||||  ||||||||||| ||||||||||||    
T  40145463 taacttacataaaaacaacttgactttattttatcttttgtta 40145421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 5511588 - 5511507
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattataca 175  Q
    |||||||||||||| ||| ||| | ||| |||||||| |  ||||||||||| ||| |||  |||||||||||| |||||||    
T  5511588 gatagtttatgaaaacattttaaaccttgtatgaaaaaagtttgactttattttatatttcattatagaaataacttataca 5511507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 15171244 - 15171191
Alignment:
Q  123 tatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| ||||||||| | |||||| ||||||||||| || ||||||||    
T  15171244 tatgaaaacattttgactttaatttatcttctgttatagaaaaaacttatacat 15171191  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 25609794 - 25609737
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||| ||||| | |||||||||||| |||||||| |||||||||||  ||||||||    
T  25609794 cttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacat 25609737  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 25790124 - 25790067
Alignment:
Q  119 cttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||||||  ||||||| | | |||||||| ||||||||||| |||||||||    
T  25790124 cttatatgaaaacagtttgacttcactttatctttttttatagaaatatattatacat 25790067  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 33576682 - 33576723
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| |||||||||||||||||||||  |||||||    
T  33576682 ttgactttattgtatcttttgttatagaaataacctatacat 33576723  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 42817447 - 42817496
Alignment:
Q  118 acttatatgaaaacatattgactttattatatcttttgttatagaaataa 167  Q
    |||||||||||||||  ||||||| ||| ||||||||| |||||||||||    
T  42817447 acttatatgaaaacagcttgacttcattttatcttttggtatagaaataa 42817496  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 176
Target Start/End: Complemental strand, 43163522 - 43163485
Alignment:
Q  139 ctttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  43163522 ctttattatagcttttgttatagaaatagattatacat 43163485  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 43199437 - 43199356
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaataaattataca 175  Q
    |||||||||||||| || |||| | |||||| ||| | |  || |||||||| ||||||||||| ||||||||| |||||||    
T  43199437 gatagtttatgaaaacaacttatagcttatacgaagataatttaactttattttatcttttgttgtagaaataacttataca 43199356  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 1494506 - 1494538
Alignment:
Q  134 attgactttattatatcttttgttatagaaata 166  Q
    ||||||||||||||||||||| |||||||||||    
T  1494506 attgactttattatatcttttcttatagaaata 1494538  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 13630354 - 13630410
Alignment:
Q  120 ttatatgaaaacatattgactttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||||  ||||||||||  ||||||||| || |||||||| ||||||||    
T  13630354 ttatatgaaaacagtttgactttatcttatcttttgatagagaaataacttatacat 13630410  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 176
Target Start/End: Original strand, 26522717 - 26522753
Alignment:
Q  140 tttattatatcttttgttatagaaataaattatacat 176  Q
    |||||||||||||||||||||||||||  ||||||||    
T  26522717 tttattatatcttttgttatagaaatagtttatacat 26522753  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 34054948 - 34055020
Alignment:
Q  94 gatagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaaata 166  Q
    ||||| |||||||| || |||| | | |||||| |||||  ||| ||||||| ||||||||||||||||||||    
T  34054948 gatagcttatgaaaacaccttatatcatatatgtaaacagtttgcctttattttatcttttgttatagaaata 34055020  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 88
Target Start/End: Original strand, 37845368 - 37845396
Alignment:
Q  60 catgtccataaactattttcagcttattt 88  Q
    |||||||||||||||||||||||||||||    
T  37845368 catgtccataaactattttcagcttattt 37845396  T

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Target: scaffold0549 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 1772 - 1840
Alignment:
Q  95 atagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaa 163  Q
    |||| ||||||||||| |||| | | |||||||||| | ||| |||||||| |||||||||||||||||    
T  1772 atagcttatgaaaccaacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaa 1840  T

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Target: scaffold0549; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 3862 - 3930
Alignment:
Q  95 atagtttatgaaaccatcttacaacttatatgaaaacatattgactttattatatcttttgttatagaa 163  Q
    |||| ||||||||||| |||| | | |||||||||| | ||| |||||||| |||||||||||||||||    
T  3862 atagcttatgaaaccaacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaa 3930  T

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Target: scaffold0590 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 1162 - 1203
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  1162 ttgactttattttatcttttgttatagaaatagcttatacat 1203  T

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Target: scaffold0275 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 2813 - 2772
Alignment:
Q  135 ttgactttattatatcttttgttatagaaataaattatacat 176  Q
    ||||||||||| ||||||||||||||||||||  ||||||||    
T  2813 ttgactttattttatcttttgttatagaaatagcttatacat 2772  T

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