View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2567_low_5 (Length: 283)
Name: NF2567_low_5
Description: NF2567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2567_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 5 - 276
Target Start/End: Complemental strand, 40622823 - 40622552
Alignment:
| Q |
5 |
aaaaggtagaaaaagagaggattttatgttatatagagaaggaatcaagactaagttactaaccctaccttattatgaagatgaaattgtggatttgtaa |
104 |
Q |
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| T |
40622823 |
aaaaggtagaaaaagagaggattttatgttatatagagaaggaatcaagactaagttactaaccctaccttattatgaagatgaaattgtggatttgtaa |
40622724 |
T |
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| Q |
105 |
ggacaaatgtgtggataatgtgtattgaaagttgaagctaaaacttggggaggaaaaagagagaagaagatgaatgaaactgaaaaagggtgtgttgtgt |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40622723 |
ggacaaatgtgtggataatgtgtattgaaagttgaagctaaaacttggggaggaaaaagagagaagaagatgaatgaaactgaaaaagggtgtgttgtgt |
40622624 |
T |
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| Q |
205 |
ttaactagttcaaccaagtaatataataataatttagaatttcttttttactaaaaatagagggttcatctc |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40622623 |
ttaactagttcaaccaagtaatataataataatttagaatttcttttttactaaaaatagagggttcatctc |
40622552 |
T |
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