View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2568_high_17 (Length: 410)

Name: NF2568_high_17
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2568_high_17
NF2568_high_17
[»] chr3 (9 HSPs)
chr3 (19-231)||(5323285-5323497)
chr3 (297-375)||(5323646-5323724)
chr3 (19-73)||(48340475-48340529)
chr3 (19-71)||(9027142-9027194)
chr3 (19-71)||(10298057-10298109)
chr3 (19-71)||(19557052-19557104)
chr3 (19-71)||(34080030-34080082)
chr3 (19-71)||(40690996-40691048)
chr3 (19-71)||(49823381-49823433)
[»] scaffold0464 (1 HSPs)
scaffold0464 (19-71)||(6131-6183)
[»] scaffold0204 (1 HSPs)
scaffold0204 (19-71)||(23863-23915)
[»] chr8 (12 HSPs)
chr8 (19-71)||(3304278-3304330)
chr8 (19-71)||(54612-54664)
chr8 (19-71)||(2890162-2890214)
chr8 (19-71)||(6552733-6552785)
chr8 (19-71)||(7785778-7785830)
chr8 (19-71)||(12763654-12763706)
chr8 (20-68)||(17006914-17006962)
chr8 (20-68)||(17570285-17570333)
chr8 (19-71)||(24692056-24692108)
chr8 (19-71)||(32114475-32114527)
chr8 (19-71)||(33289261-33289313)
chr8 (19-71)||(39571203-39571255)
[»] chr7 (10 HSPs)
chr7 (19-71)||(94318-94370)
chr7 (19-71)||(36583473-36583525)
chr7 (19-73)||(46840938-46840992)
chr7 (19-71)||(1738447-1738499)
chr7 (19-71)||(7240827-7240879)
chr7 (19-71)||(7482303-7482355)
chr7 (19-71)||(9268834-9268886)
chr7 (19-71)||(22285777-22285829)
chr7 (21-73)||(23314137-23314189)
chr7 (19-71)||(31319399-31319451)
[»] chr5 (8 HSPs)
chr5 (19-71)||(13033129-13033181)
chr5 (19-71)||(6126902-6126954)
chr5 (19-71)||(9395428-9395480)
chr5 (19-71)||(13103102-13103154)
chr5 (19-71)||(17025702-17025754)
chr5 (19-71)||(21576024-21576076)
chr5 (19-71)||(36563538-36563590)
chr5 (19-71)||(41989407-41989459)
[»] chr4 (11 HSPs)
chr4 (19-71)||(17236866-17236918)
chr4 (19-71)||(48336341-48336393)
chr4 (19-75)||(51894578-51894634)
chr4 (21-70)||(40913190-40913239)
chr4 (19-71)||(3372199-3372251)
chr4 (19-71)||(3422138-3422190)
chr4 (19-71)||(6121893-6121945)
chr4 (19-71)||(17344291-17344343)
chr4 (19-71)||(24704448-24704500)
chr4 (19-71)||(33621874-33621926)
chr4 (19-71)||(47833689-47833741)
[»] chr2 (13 HSPs)
chr2 (19-71)||(41492896-41492948)
chr2 (19-74)||(12337934-12337989)
chr2 (19-73)||(15896920-15896974)
chr2 (19-72)||(15372304-15372357)
chr2 (19-71)||(3055636-3055688)
chr2 (19-71)||(6648519-6648571)
chr2 (19-71)||(9047755-9047807)
chr2 (19-71)||(13197710-13197762)
chr2 (19-71)||(13344562-13344614)
chr2 (19-71)||(37990013-37990065)
chr2 (19-71)||(38917522-38917574)
chr2 (19-71)||(41478639-41478691)
chr2 (19-71)||(44398764-44398816)
[»] chr1 (15 HSPs)
chr1 (19-71)||(11897132-11897184)
chr1 (19-75)||(39401962-39402018)
chr1 (19-71)||(47216699-47216751)
chr1 (19-73)||(26471063-26471117)
chr1 (19-73)||(31842793-31842847)
chr1 (19-73)||(47777479-47777533)
chr1 (19-72)||(11796011-11796064)
chr1 (19-71)||(12483628-12483680)
chr1 (19-71)||(14984915-14984967)
chr1 (19-71)||(16448186-16448238)
chr1 (19-71)||(17556831-17556883)
chr1 (19-71)||(25694397-25694449)
chr1 (19-71)||(27159358-27159410)
chr1 (19-71)||(34042774-34042826)
chr1 (19-71)||(44668093-44668145)
[»] scaffold0009 (1 HSPs)
scaffold0009 (19-72)||(49583-49636)
[»] chr6 (9 HSPs)
chr6 (19-71)||(2830413-2830465)
chr6 (19-71)||(6330193-6330245)
chr6 (19-71)||(8099608-8099660)
chr6 (19-71)||(8382969-8383021)
chr6 (19-71)||(9644774-9644826)
chr6 (19-71)||(9650791-9650843)
chr6 (19-71)||(11572145-11572197)
chr6 (19-71)||(13853593-13853645)
chr6 (19-71)||(26602401-26602453)


Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-109; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 5323285 - 5323497
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaatatgtcgaaaatatgtcttaatgacacttctctttcaccaaaatat 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5323285 acatcaacttttgttgacccaaattttacttataaatagtatcggagggagtaatatgttgaaaatatgtcttaatgacacttctctttcaccaaaatat 5323384  T
Q  119 atcattcatgtggaaaaccatgtggatgaggcgacaattagataaaattcaacaacgtagattttggtgtgaaactagcaataaatttacgaggggctaa 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5323385 atcattcatgtggaaaaccatgtggatgaggcgacaattagataaaattcaacaacgtagattttggtgtgaaactagcaataaatttacgaggggctaa 5323484  T
Q  219 acatacaagaagg 231  Q
    ||||| |||||||    
T  5323485 acatataagaagg 5323497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 297 - 375
Target Start/End: Original strand, 5323646 - 5323724
Alignment:
Q  297 tgttgattttaactatgctttaaggagtcagatttatctatctataattgataaatttaaactaaaacaacacaaaaaa 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5323646 tgttgattttaactatgctttaaggagtcagatttatctatctataattgataaatttaaactaaaacaacacaaaaaa 5323724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 48340475 - 48340529
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaat 73  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||    
T  48340475 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 48340529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 9027194 - 9027142
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| |||| |||  ||||||||||| | |||||||||||    
T  9027194 acatcaacttttgttgacccaactttatcttataaataggaccggagggagta 9027142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 10298057 - 10298109
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  10298057 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19557104 - 19557052
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  19557104 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 34080082 - 34080030
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  34080082 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 40691048 - 40690996
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  40691048 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 49823433 - 49823381
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  49823433 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 6183 - 6131
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||| ||||||||||| | |||||||||||    
T  6183 acatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 23863 - 23915
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||| ||||||||||| | |||||||||||    
T  23863 acatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 3304330 - 3304278
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||| ||||||||||| | |||||||||||    
T  3304330 acatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 54664 - 54612
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  54664 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 2890214 - 2890162
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  2890214 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6552733 - 6552785
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  6552733 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 7785830 - 7785778
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  7785830 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 12763706 - 12763654
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  12763706 acatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 17006962 - 17006914
Alignment:
Q  20 catcaacttttgttgaaccaaattttacttataaatagtatcggaggga 68  Q
    |||||||||||||||| |||| |||  ||||||||||| ||||||||||    
T  17006962 catcaacttttgttgacccaactttctcttataaataggatcggaggga 17006914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 17570285 - 17570333
Alignment:
Q  20 catcaacttttgttgaaccaaattttacttataaatagtatcggaggga 68  Q
    |||||||||||||||| |||| |||  ||||||||||| ||||||||||    
T  17570285 catcaacttttgttgacccaactttctcttataaataggatcggaggga 17570333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24692056 - 24692108
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| | || |||| ||||||||||| |||| ||||||||    
T  24692056 acatcaacttttgttgacctaactttttcttataaataggatcgaagggagta 24692108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32114527 - 32114475
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||| ||||||||| ||||| ||| ||||||||||| | |||||||||||    
T  32114527 acatcaatttttgttgacccaaaattttcttataaataggaccggagggagta 32114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 33289313 - 33289261
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  33289313 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 39571255 - 39571203
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  39571255 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 94370 - 94318
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| |||||||||||||    
T  94370 acatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 36583473 - 36583525
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| |||||||||||||    
T  36583473 acatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 36583525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 46840938 - 46840992
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaat 73  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||    
T  46840938 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 46840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 1738499 - 1738447
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  1738499 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 7240827 - 7240879
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  7240827 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 7482303 - 7482355
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  7482303 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 9268834 - 9268886
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  9268834 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 22285777 - 22285829
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  22285777 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 23314189 - 23314137
Alignment:
Q  21 atcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaat 73  Q
    ||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||    
T  23314189 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 23314137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 31319451 - 31319399
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  31319451 acatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 13033129 - 13033181
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| |||||||||||||    
T  13033129 acatcaacttttgttgacccaaaattctcttataaataggatcggagggagta 13033181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6126902 - 6126954
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  6126902 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 9395428 - 9395480
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  9395428 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 13103102 - 13103154
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  13103102 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 17025702 - 17025754
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  17025702 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21576024 - 21576076
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  21576024 acatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 36563590 - 36563538
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  36563590 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41989459 - 41989407
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  41989459 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 17236866 - 17236918
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||||||| ||||||||||| | ||||| |||||    
T  17236866 acatcaacttttgttgacccaaatttttcttataaataggaccggagagagta 17236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 48336341 - 48336393
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||| ||||||||||| | |||||||||||    
T  48336341 acatcaacttttgttgacccaaaattttcttataaataggaccggagggagta 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 51894634 - 51894578
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaatat 75  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||||    
T  51894634 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaatat 51894578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 40913239 - 40913190
Alignment:
Q  21 atcaacttttgttgaaccaaattttacttataaatagtatcggagggagt 70  Q
    ||||||||||||||| ||||||||  ||||||||||| | ||||||||||    
T  40913239 atcaacttttgttgatccaaatttctcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 3372199 - 3372251
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  3372199 acatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 3422138 - 3422190
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  3422138 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 6121945 - 6121893
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  6121945 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 17344291 - 17344343
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||||||  ||||||||||  || ||||||||||    
T  17344291 acatcaacttttgttgatccaaatttctcttataaataagattggagggagta 17344343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24704448 - 24704500
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    |||| |||||||||||| ||||| ||  ||||||||||| |||||||||||||    
T  24704448 acattaacttttgttgacccaaaattctcttataaataggatcggagggagta 24704500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 33621874 - 33621926
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  33621874 acatcaacttttgttgacccaaaattatcttataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 47833689 - 47833741
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  47833689 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41492948 - 41492896
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||||||  ||||||||||| | |||||||||||    
T  41492948 acatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 12337989 - 12337934
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaata 74  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | ||||||||||||||    
T  12337989 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaata 12337934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 15896920 - 15896974
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaat 73  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||    
T  15896920 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 15896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 15372304 - 15372357
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaa 72  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | ||||||||||||    
T  15372304 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 15372357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 3055636 - 3055688
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  3055636 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 6648571 - 6648519
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  6648571 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 9047807 - 9047755
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  9047807 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 13197762 - 13197710
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  13197762 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 13344562 - 13344614
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  13344562 acatcaacttttgttgatccaaaattctcttataaataggaccggagggagta 13344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37990065 - 37990013
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  37990065 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 38917574 - 38917522
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  38917574 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 41478691 - 41478639
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  41478691 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 44398764 - 44398816
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  44398764 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 11897132 - 11897184
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||||||  ||||||||||| | |||||||||||    
T  11897132 acatcaacttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 39402018 - 39401962
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaatat 75  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||||    
T  39402018 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaatat 39401962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 47216751 - 47216699
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||||| |||||||||||    
T  47216751 acatcaacttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 26471117 - 26471063
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaat 73  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||    
T  26471117 acatcaacttttgttgatccaaaattctcttataaataggaccggagggagtaat 26471063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 31842847 - 31842793
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaat 73  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||    
T  31842847 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 31842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 47777533 - 47777479
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaat 73  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||||    
T  47777533 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 47777479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 11796011 - 11796064
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaa 72  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | ||||||||||||    
T  11796011 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 11796064  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 12483680 - 12483628
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  12483680 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 14984915 - 14984967
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  14984915 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

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Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 16448186 - 16448238
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| |||| |||  ||||||||||| | |||||||||||    
T  16448186 acatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 17556831 - 17556883
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| |||| |||  ||||||||||| | |||||||||||    
T  17556831 acatcaacttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25694397 - 25694449
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  25694397 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 27159410 - 27159358
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  27159410 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34042774 - 34042826
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  34042774 acatcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44668145 - 44668093
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  44668145 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 49583 - 49636
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagtaa 72  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | ||||||||||||    
T  49583 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 49636  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000006; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 2830413 - 2830465
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  2830413 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6330193 - 6330245
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  6330193 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 8099608 - 8099660
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  8099608 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 8383021 - 8382969
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  8383021 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 9644774 - 9644826
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  9644774 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 9650791 - 9650843
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  9650791 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 11572197 - 11572145
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  11572197 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 13853645 - 13853593
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  13853645 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 26602401 - 26602453
Alignment:
Q  19 acatcaacttttgttgaaccaaattttacttataaatagtatcggagggagta 71  Q
    ||||||||||||||||| ||||| ||  ||||||||||| | |||||||||||    
T  26602401 acatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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