View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2568_low_20 (Length: 400)

Name: NF2568_low_20
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2568_low_20
NF2568_low_20
[»] chr8 (65 HSPs)
chr8 (93-390)||(10240263-10240559)
chr8 (1-162)||(4283573-4283732)
chr8 (1-162)||(42434951-42435110)
chr8 (1-128)||(11711993-11712120)
chr8 (1-154)||(18655449-18655600)
chr8 (1-241)||(40328828-40329061)
chr8 (1-102)||(7597663-7597764)
chr8 (1-62)||(10240203-10240264)
chr8 (1-97)||(42498243-42498338)
chr8 (10-97)||(1746243-1746328)
chr8 (11-97)||(34256531-34256616)
chr8 (1-97)||(3303694-3303789)
chr8 (1-98)||(19491722-19491818)
chr8 (1-241)||(11384034-11384270)
chr8 (1-97)||(27811327-27811422)
chr8 (1-97)||(33352199-33352294)
chr8 (10-121)||(44303913-44304023)
chr8 (11-97)||(17982712-17982797)
chr8 (1-83)||(30143389-30143470)
chr8 (11-97)||(34254355-34254440)
chr8 (4-97)||(1345395-1345487)
chr8 (2-103)||(32902191-32902292)
chr8 (1-162)||(40221794-40221953)
chr8 (1-97)||(15212835-15212930)
chr8 (10-241)||(3772250-3772477)
chr8 (3-145)||(10930175-10930316)
chr8 (10-97)||(31218315-31218401)
chr8 (1-83)||(44353842-44353923)
chr8 (1-83)||(4731707-4731788)
chr8 (1-83)||(12702672-12702753)
chr8 (10-83)||(5689329-5689401)
chr8 (1-97)||(43036472-43036567)
chr8 (10-97)||(19945383-19945470)
chr8 (1-124)||(29796317-29796441)
chr8 (1-130)||(10015130-10015255)
chr8 (1-130)||(1292456-1292582)
chr8 (12-126)||(3073870-3073981)
chr8 (262-316)||(15691109-15691163)
chr8 (1-83)||(18141869-18141950)
chr8 (44-97)||(2627827-2627880)
chr8 (44-97)||(4743238-4743291)
chr8 (1-97)||(40321129-40321224)
chr8 (1-124)||(8965689-8965810)
chr8 (43-102)||(38863948-38864007)
chr8 (1-83)||(1822341-1822423)
chr8 (1-83)||(1856786-1856868)
chr8 (1-126)||(4162546-4162668)
chr8 (44-97)||(6599063-6599116)
chr8 (44-97)||(6674516-6674569)
chr8 (10-97)||(3439561-3439647)
chr8 (1-83)||(30291656-30291737)
chr8 (1-83)||(41366652-41366733)
chr8 (10-71)||(9765803-9765863)
chr8 (1-57)||(3231859-3231915)
chr8 (254-317)||(3772505-3772569)
chr8 (33-97)||(4733787-4733850)
chr8 (1-81)||(8153807-8153886)
chr8 (38-97)||(15290608-15290668)
chr8 (38-97)||(15470977-15471037)
chr8 (38-97)||(42575348-42575408)
chr8 (175-257)||(7624812-7624894)
chr8 (10-97)||(25690012-25690098)
chr8 (254-293)||(40329089-40329128)
chr8 (180-241)||(18655627-18655688)
chr8 (254-294)||(40222036-40222076)
[»] chr7 (76 HSPs)
chr7 (1-242)||(8359197-8359436)
chr7 (1-162)||(32358014-32358173)
chr7 (1-317)||(22328185-22328510)
chr7 (1-162)||(29608786-29608945)
chr7 (1-241)||(2390331-2390571)
chr7 (1-162)||(34310675-34310835)
chr7 (1-241)||(3259044-3259280)
chr7 (4-162)||(4508666-4508822)
chr7 (4-162)||(4510508-4510664)
chr7 (4-162)||(4512350-4512506)
chr7 (1-162)||(48599294-48599453)
chr7 (1-130)||(4253520-4253648)
chr7 (1-130)||(22270022-22270149)
chr7 (1-144)||(6359929-6360071)
chr7 (1-97)||(23555089-23555184)
chr7 (10-97)||(35853972-35854058)
chr7 (1-128)||(36574510-36574635)
chr7 (1-97)||(6432020-6432115)
chr7 (1-97)||(27347866-27347961)
chr7 (1-97)||(48491628-48491723)
chr7 (10-97)||(19502236-19502322)
chr7 (10-97)||(29991111-29991197)
chr7 (1-123)||(18396367-18396488)
chr7 (1-83)||(47673981-47674062)
chr7 (4-105)||(3904633-3904733)
chr7 (1-82)||(23565100-23565180)
chr7 (8-97)||(39731424-39731513)
chr7 (1-97)||(496007-496102)
chr7 (1-97)||(1113706-1113801)
chr7 (10-97)||(4178832-4178917)
chr7 (1-105)||(5116653-5116757)
chr7 (1-97)||(30024756-30024851)
chr7 (1-97)||(47676160-47676255)
chr7 (7-97)||(43504178-43504269)
chr7 (10-83)||(14069871-14069943)
chr7 (10-83)||(14379899-14379971)
chr7 (1-130)||(31105385-31105512)
chr7 (1-89)||(4586210-4586297)
chr7 (1-97)||(25615902-25615997)
chr7 (10-97)||(25766984-25767071)
chr7 (5-97)||(31732993-31733084)
chr7 (1-97)||(36146432-36146526)
chr7 (10-97)||(41649035-41649121)
chr7 (1-83)||(26417365-26417446)
chr7 (1-97)||(2360996-2361091)
chr7 (1-82)||(43864293-43864373)
chr7 (176-317)||(1359978-1360120)
chr7 (10-97)||(8153400-8153486)
chr7 (1-97)||(18126693-18126788)
chr7 (39-103)||(26639411-26639475)
chr7 (10-97)||(41317458-41317544)
chr7 (1-97)||(48489480-48489575)
chr7 (175-237)||(8452088-8452148)
chr7 (33-83)||(24525540-24525589)
chr7 (47-97)||(30814530-30814580)
chr7 (33-130)||(31518983-31519079)
chr7 (1-81)||(2759237-2759316)
chr7 (10-97)||(18388784-18388872)
chr7 (10-97)||(18392220-18392308)
chr7 (38-97)||(32060346-32060406)
chr7 (10-97)||(48408860-48408948)
chr7 (33-128)||(5513661-5513754)
chr7 (273-320)||(26639647-26639694)
chr7 (1-130)||(23344024-23344149)
chr7 (10-97)||(6592364-6592452)
chr7 (10-97)||(6594582-6594670)
chr7 (44-97)||(38671246-38671299)
chr7 (10-97)||(20343954-20344041)
chr7 (204-293)||(29608986-29609083)
chr7 (254-293)||(2390599-2390638)
chr7 (254-293)||(8359134-8359173)
chr7 (1-115)||(43363478-43363593)
chr7 (44-97)||(1560690-1560744)
chr7 (276-317)||(5116929-5116970)
chr7 (254-291)||(48599154-48599191)
chr7 (10-97)||(24789899-24789985)
[»] chr2 (53 HSPs)
chr2 (1-162)||(33648220-33648381)
chr2 (1-162)||(35446844-35447003)
chr2 (1-162)||(24398106-24398271)
chr2 (1-161)||(45726978-45727136)
chr2 (4-162)||(30218004-30218161)
chr2 (1-97)||(6595030-6595125)
chr2 (1-97)||(2334442-2334537)
chr2 (11-119)||(28671989-28672097)
chr2 (10-97)||(36988100-36988186)
chr2 (1-127)||(17490143-17490267)
chr2 (1-162)||(1631692-1631851)
chr2 (10-95)||(5723282-5723366)
chr2 (10-97)||(4484354-4484441)
chr2 (1-241)||(7451167-7451404)
chr2 (11-97)||(30833404-30833490)
chr2 (10-97)||(4503157-4503242)
chr2 (1-130)||(42019861-42019992)
chr2 (10-97)||(45099813-45099898)
chr2 (46-242)||(17450671-17450863)
chr2 (1-83)||(36318047-36318128)
chr2 (1-83)||(38312289-38312370)
chr2 (1-314)||(42261290-42261605)
chr2 (1-97)||(11049602-11049698)
chr2 (1-97)||(17057393-17057488)
chr2 (1-97)||(17085376-17085471)
chr2 (1-97)||(723768-723863)
chr2 (10-97)||(11067363-11067449)
chr2 (1-87)||(13121818-13121901)
chr2 (10-97)||(29867927-29868013)
chr2 (1-83)||(36773611-36773692)
chr2 (1-83)||(7815311-7815392)
chr2 (7-97)||(32289618-32289708)
chr2 (1-83)||(33162488-33162569)
chr2 (1-97)||(42362401-42362496)
chr2 (7-97)||(6266746-6266835)
chr2 (1-83)||(26353233-26353314)
chr2 (10-97)||(12647410-12647498)
chr2 (44-97)||(34139794-34139847)
chr2 (1-97)||(14633849-14633945)
chr2 (10-97)||(36205689-36205774)
chr2 (1-241)||(42287993-42288229)
chr2 (1-130)||(7597003-7597130)
chr2 (47-97)||(39284930-39284980)
chr2 (175-224)||(16676449-16676498)
chr2 (254-298)||(7451432-7451476)
chr2 (1-97)||(11151615-11151710)
chr2 (1-89)||(11690550-11690637)
chr2 (10-97)||(13656056-13656143)
chr2 (44-83)||(14202450-14202489)
chr2 (36-121)||(18480529-18480614)
chr2 (251-317)||(40935421-40935487)
chr2 (52-97)||(42412117-42412161)
chr2 (1-61)||(4561137-4561197)
[»] chr4 (93 HSPs)
chr4 (1-241)||(12073441-12073678)
chr4 (1-162)||(8665457-8665616)
chr4 (1-259)||(33989893-33990149)
chr4 (1-241)||(2209762-2210004)
chr4 (1-162)||(46703549-46703710)
chr4 (1-162)||(50673807-50673966)
chr4 (1-162)||(379429-379589)
chr4 (1-162)||(8648188-8648347)
chr4 (4-226)||(12119591-12119815)
chr4 (1-162)||(40632494-40632653)
chr4 (1-162)||(6656005-6656164)
chr4 (1-162)||(33089927-33090089)
chr4 (1-162)||(26699401-26699562)
chr4 (1-241)||(41964464-41964699)
chr4 (1-97)||(56178661-56178756)
chr4 (4-162)||(41639478-41639634)
chr4 (1-130)||(4588008-4588135)
chr4 (33-128)||(35369440-35369533)
chr4 (1-162)||(34112866-34113023)
chr4 (1-162)||(50262656-50262820)
chr4 (1-162)||(35662490-35662649)
chr4 (1-97)||(48143092-48143187)
chr4 (13-128)||(21703829-21703943)
chr4 (1-161)||(22882715-22882870)
chr4 (1-161)||(22934379-22934534)
chr4 (1-161)||(54883069-54883229)
chr4 (1-130)||(6542171-6542298)
chr4 (1-162)||(27416925-27417084)
chr4 (1-97)||(9927482-9927577)
chr4 (1-97)||(26175660-26175755)
chr4 (33-129)||(37229714-37229808)
chr4 (11-127)||(37754954-37755070)
chr4 (10-97)||(5370107-5370193)
chr4 (10-97)||(12743949-12744035)
chr4 (10-97)||(12745338-12745424)
chr4 (1-162)||(26364285-26364445)
chr4 (1-158)||(38811153-38811308)
chr4 (1-83)||(34570452-34570533)
chr4 (1-83)||(37740674-37740755)
chr4 (1-89)||(36994573-36994660)
chr4 (10-97)||(29999830-29999917)
chr4 (1-83)||(5429728-5429809)
chr4 (7-97)||(13992317-13992405)
chr4 (1-130)||(31474200-31474327)
chr4 (1-97)||(48893662-48893757)
chr4 (1-97)||(36463413-36463508)
chr4 (1-97)||(47038435-47038529)
chr4 (10-94)||(52095389-52095472)
chr4 (10-81)||(12744087-12744157)
chr4 (10-81)||(12745476-12745546)
chr4 (7-97)||(31495340-31495431)
chr4 (1-83)||(3913497-3913578)
chr4 (1-97)||(46147415-46147510)
chr4 (38-97)||(7122767-7122827)
chr4 (1-97)||(54199930-54200025)
chr4 (1-80)||(6677518-6677597)
chr4 (10-97)||(12739574-12739660)
chr4 (35-106)||(35370072-35370142)
chr4 (12-127)||(44967823-44967937)
chr4 (1-59)||(44570427-44570485)
chr4 (181-257)||(6719781-6719858)
chr4 (10-83)||(12747794-12747866)
chr4 (44-97)||(13009468-13009521)
chr4 (44-89)||(45687214-45687259)
chr4 (175-240)||(55085325-55085390)
chr4 (38-97)||(7124986-7125046)
chr4 (254-317)||(35662750-35662814)
chr4 (254-317)||(54881613-54881677)
chr4 (1-79)||(24969161-24969238)
chr4 (254-317)||(33090178-33090241)
chr4 (254-293)||(41964727-41964766)
chr4 (1-75)||(53345266-53345340)
chr4 (256-293)||(379696-379733)
chr4 (272-317)||(3786296-3786341)
chr4 (44-97)||(5207866-5207919)
chr4 (254-291)||(26364550-26364587)
chr4 (1-82)||(29254543-29254623)
chr4 (254-319)||(32091749-32091814)
chr4 (87-162)||(3786095-3786171)
chr4 (38-97)||(5136149-5136209)
chr4 (38-97)||(5138374-5138434)
chr4 (10-97)||(8393451-8393538)
chr4 (10-97)||(8395660-8395747)
chr4 (1-57)||(32091527-32091583)
chr4 (10-58)||(41961475-41961523)
chr4 (254-294)||(55085261-55085301)
chr4 (11-130)||(51337123-51337240)
chr4 (1-83)||(52467392-52467473)
chr4 (44-97)||(5871911-5871964)
chr4 (1-58)||(48142440-48142497)
chr4 (254-294)||(8648460-8648500)
chr4 (254-294)||(8665721-8665761)
chr4 (273-317)||(34113117-34113161)
[»] chr6 (49 HSPs)
chr6 (1-162)||(5043676-5043836)
chr6 (1-241)||(26800636-26800873)
chr6 (1-162)||(21588980-21589139)
chr6 (1-235)||(3808592-3808828)
chr6 (1-145)||(21593713-21593855)
chr6 (1-162)||(22424785-22424946)
chr6 (1-248)||(17763039-17763284)
chr6 (1-235)||(17758072-17758304)
chr6 (1-136)||(2972925-2973058)
chr6 (1-154)||(26830091-26830242)
chr6 (1-162)||(25073617-25073784)
chr6 (10-97)||(5406224-5406310)
chr6 (10-97)||(5410549-5410635)
chr6 (10-97)||(5413418-5413504)
chr6 (10-94)||(31404702-31404785)
chr6 (1-87)||(9183065-9183150)
chr6 (10-97)||(2171556-2171641)
chr6 (10-97)||(30834560-30834646)
chr6 (1-95)||(4045472-4045566)
chr6 (1-97)||(26954310-26954405)
chr6 (33-97)||(5409093-5409156)
chr6 (1-97)||(28137432-28137527)
chr6 (10-92)||(33160381-33160462)
chr6 (7-97)||(412155-412246)
chr6 (7-97)||(3072783-3072874)
chr6 (10-97)||(16452353-16452439)
chr6 (1-83)||(603126-603207)
chr6 (44-97)||(6097475-6097528)
chr6 (44-97)||(16569113-16569166)
chr6 (39-80)||(2908545-2908586)
chr6 (4-97)||(3038927-3039019)
chr6 (10-97)||(25421362-25421450)
chr6 (35-146)||(9572673-9572785)
chr6 (33-97)||(33211209-33211272)
chr6 (254-293)||(26800901-26800940)
chr6 (272-317)||(4386859-4386904)
chr6 (10-97)||(6027303-6027391)
chr6 (183-262)||(11660831-11660911)
chr6 (38-97)||(13153999-13154059)
chr6 (38-97)||(33342129-33342189)
chr6 (38-97)||(34164942-34165002)
chr6 (182-256)||(5739860-5739935)
chr6 (204-241)||(22424706-22424743)
chr6 (10-97)||(16554926-16555013)
chr6 (10-97)||(16578542-16578629)
chr6 (10-97)||(16616751-16616838)
chr6 (10-97)||(16631482-16631569)
chr6 (10-97)||(16653169-16653256)
chr6 (38-97)||(34167164-34167224)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-241)||(17885-18122)
[»] chr1 (84 HSPs)
chr1 (1-127)||(22079365-22079491)
chr1 (1-248)||(47115220-47115465)
chr1 (1-136)||(47255325-47255459)
chr1 (1-162)||(37168346-37168506)
chr1 (1-162)||(13547049-13547208)
chr1 (33-162)||(28242386-28242513)
chr1 (1-162)||(13548960-13549119)
chr1 (1-162)||(31925667-31925826)
chr1 (1-232)||(6808501-6808730)
chr1 (1-162)||(7482190-7482350)
chr1 (1-105)||(42297991-42298094)
chr1 (11-162)||(2926567-2926719)
chr1 (1-241)||(37032951-37033192)
chr1 (1-154)||(11348747-11348898)
chr1 (1-162)||(29136296-29136456)
chr1 (2-128)||(5459956-5460081)
chr1 (1-130)||(15820356-15820483)
chr1 (1-97)||(3156914-3157009)
chr1 (1-97)||(28223445-28223540)
chr1 (1-130)||(23555258-23555384)
chr1 (1-130)||(2262965-2263094)
chr1 (1-257)||(9109283-9109539)
chr1 (1-130)||(16455670-16455797)
chr1 (1-97)||(34603625-34603721)
chr1 (33-162)||(37876726-37876853)
chr1 (1-98)||(41360963-41361059)
chr1 (1-97)||(28220250-28220345)
chr1 (1-97)||(49918399-49918494)
chr1 (1-162)||(12318482-12318642)
chr1 (10-97)||(13316376-13316462)
chr1 (10-97)||(20762730-20762816)
chr1 (3-121)||(46064969-46065085)
chr1 (1-130)||(193660-193787)
chr1 (1-83)||(19754544-19754625)
chr1 (1-121)||(37503558-37503673)
chr1 (1-97)||(8550811-8550906)
chr1 (1-98)||(13137999-13138095)
chr1 (1-97)||(3189379-3189474)
chr1 (1-97)||(3198196-3198291)
chr1 (1-97)||(3207035-3207130)
chr1 (1-97)||(19752735-19752830)
chr1 (1-97)||(28265578-28265673)
chr1 (1-95)||(13659362-13659455)
chr1 (1-83)||(31659287-31659368)
chr1 (1-97)||(44455209-44455304)
chr1 (10-83)||(50167213-50167285)
chr1 (1-97)||(834191-834286)
chr1 (1-97)||(4552661-4552756)
chr1 (1-84)||(37282728-37282811)
chr1 (1-127)||(927971-928095)
chr1 (4-97)||(1833574-1833666)
chr1 (10-83)||(50169248-50169320)
chr1 (33-130)||(44650154-44650250)
chr1 (10-94)||(51765453-51765538)
chr1 (1-158)||(25652135-25652290)
chr1 (1-127)||(3460745-3460869)
chr1 (7-97)||(9987256-9987345)
chr1 (1-83)||(10925272-10925356)
chr1 (7-97)||(40282432-40282521)
chr1 (267-317)||(41136137-41136187)
chr1 (44-97)||(36683771-36683824)
chr1 (10-83)||(37559906-37559978)
chr1 (10-97)||(44203688-44203776)
chr1 (11-104)||(13938195-13938288)
chr1 (33-97)||(45644378-45644441)
chr1 (10-97)||(9036474-9036560)
chr1 (254-293)||(28242619-28242658)
chr1 (39-130)||(44646796-44646886)
chr1 (53-94)||(8871089-8871130)
chr1 (44-97)||(20622261-20622314)
chr1 (12-60)||(4535541-4535589)
chr1 (2-61)||(16914234-16914294)
chr1 (1-81)||(30476486-30476565)
chr1 (254-294)||(31929373-31929413)
chr1 (254-293)||(47115486-47115525)
chr1 (7-97)||(21054013-21054102)
chr1 (177-317)||(22079534-22079676)
chr1 (11-83)||(196946-197017)
chr1 (44-81)||(3847161-3847198)
chr1 (176-225)||(16216392-16216441)
chr1 (277-317)||(12318318-12318358)
chr1 (254-294)||(31925526-31925566)
chr1 (254-290)||(37168609-37168645)
chr1 (362-390)||(51841714-51841742)
[»] chr3 (84 HSPs)
chr3 (13-162)||(55301931-55302079)
chr3 (11-241)||(6095482-6095708)
chr3 (1-293)||(46860523-46860827)
chr3 (1-241)||(49199347-49199589)
chr3 (1-162)||(30236174-30236334)
chr3 (1-145)||(54593753-54593895)
chr3 (10-162)||(41819481-41819633)
chr3 (1-241)||(43401679-43401921)
chr3 (1-241)||(43403622-43403864)
chr3 (10-97)||(19683913-19683999)
chr3 (10-97)||(37408516-37408602)
chr3 (1-130)||(33191881-33192007)
chr3 (1-97)||(7762314-7762409)
chr3 (1-97)||(34491261-34491356)
chr3 (10-97)||(45095221-45095307)
chr3 (4-145)||(4570004-4570144)
chr3 (1-162)||(20937705-20937866)
chr3 (1-145)||(46173406-46173549)
chr3 (1-97)||(7764513-7764608)
chr3 (1-97)||(29810917-29811012)
chr3 (1-97)||(40735432-40735527)
chr3 (10-97)||(9636150-9636236)
chr3 (7-97)||(7780028-7780117)
chr3 (1-97)||(9581331-9581426)
chr3 (1-97)||(22835026-22835121)
chr3 (10-97)||(5258168-5258254)
chr3 (10-97)||(5260347-5260433)
chr3 (10-97)||(23197963-23198049)
chr3 (10-97)||(23200162-23200248)
chr3 (1-95)||(16499078-16499171)
chr3 (1-83)||(29813112-29813193)
chr3 (1-130)||(32891153-32891280)
chr3 (1-103)||(35138724-35138825)
chr3 (1-83)||(44700516-44700597)
chr3 (1-97)||(40734547-40734642)
chr3 (1-97)||(44331594-44331689)
chr3 (1-97)||(760896-760991)
chr3 (1-162)||(26323029-26323193)
chr3 (1-97)||(31314494-31314589)
chr3 (1-162)||(36018901-36019057)
chr3 (7-97)||(801145-801236)
chr3 (10-97)||(29196410-29196496)
chr3 (1-97)||(51398863-51398958)
chr3 (273-317)||(1683803-1683847)
chr3 (11-104)||(4055781-4055874)
chr3 (59-102)||(5433901-5433944)
chr3 (11-97)||(40913352-40913437)
chr3 (1-79)||(5236498-5236575)
chr3 (1-83)||(29682408-29682489)
chr3 (10-97)||(3617506-3617594)
chr3 (10-97)||(25637483-25637571)
chr3 (254-314)||(5270683-5270743)
chr3 (47-126)||(2075071-2075149)
chr3 (54-97)||(27305734-27305777)
chr3 (254-293)||(41819340-41819379)
chr3 (44-83)||(47304342-47304381)
chr3 (1-83)||(53921541-53921622)
chr3 (1-58)||(2020188-2020245)
chr3 (175-224)||(5270592-5270641)
chr3 (1-97)||(32744460-32744555)
chr3 (1-97)||(39153385-39153480)
chr3 (38-97)||(4598547-4598607)
chr3 (38-97)||(10056303-10056363)
chr3 (38-97)||(10058525-10058585)
chr3 (38-97)||(10060747-10060807)
chr3 (38-97)||(10062969-10063029)
chr3 (38-97)||(10065191-10065251)
chr3 (38-97)||(10209259-10209319)
chr3 (38-97)||(10211479-10211539)
chr3 (254-294)||(36019162-36019202)
chr3 (41-160)||(39127636-39127756)
chr3 (10-97)||(6716557-6716643)
chr3 (1-60)||(40519258-40519316)
chr3 (254-317)||(46173670-46173736)
chr3 (11-82)||(51352150-51352219)
chr3 (10-97)||(54635182-54635268)
chr3 (33-102)||(1683556-1683623)
chr3 (11-97)||(23391933-23392018)
chr3 (44-97)||(45283076-45283130)
chr3 (175-224)||(1683694-1683743)
chr3 (175-224)||(50432543-50432592)
chr3 (33-66)||(54739008-54739041)
chr3 (11-104)||(4075488-4075581)
chr3 (38-97)||(4600768-4600828)
[»] scaffold0236 (1 HSPs)
scaffold0236 (10-156)||(10547-10691)
[»] chr5 (64 HSPs)
chr5 (1-224)||(316811-317032)
chr5 (1-162)||(27637572-27637732)
chr5 (1-142)||(213514-213654)
chr5 (1-162)||(5058094-5058253)
chr5 (1-130)||(13695682-13695810)
chr5 (1-162)||(40147310-40147469)
chr5 (1-130)||(28278365-28278492)
chr5 (1-97)||(13239800-13239895)
chr5 (10-97)||(25412818-25412904)
chr5 (1-130)||(16452129-16452256)
chr5 (1-97)||(33831729-33831824)
chr5 (1-97)||(42428454-42428549)
chr5 (1-120)||(10054817-10054935)
chr5 (1-95)||(9049368-9049461)
chr5 (11-97)||(37439200-37439285)
chr5 (1-102)||(3325962-3326063)
chr5 (56-145)||(4160702-4160791)
chr5 (1-97)||(538074-538169)
chr5 (11-130)||(30793195-30793312)
chr5 (7-97)||(9789248-9789338)
chr5 (1-83)||(13488252-13488333)
chr5 (7-97)||(16409529-16409619)
chr5 (7-97)||(26177936-26178026)
chr5 (1-95)||(39468575-39468668)
chr5 (10-98)||(13343119-13343205)
chr5 (1-97)||(533818-533913)
chr5 (10-97)||(36074067-36074152)
chr5 (7-97)||(18441672-18441762)
chr5 (1-127)||(33906024-33906150)
chr5 (1-83)||(42426273-42426354)
chr5 (5-130)||(3075650-3075773)
chr5 (53-317)||(16640739-16641008)
chr5 (33-162)||(27015604-27015730)
chr5 (1-97)||(30682946-30683043)
chr5 (1-93)||(42309963-42310054)
chr5 (10-97)||(30182646-30182732)
chr5 (10-97)||(32636882-32636968)
chr5 (11-97)||(31183031-31183115)
chr5 (1-83)||(38747054-38747135)
chr5 (44-97)||(26170853-26170906)
chr5 (33-130)||(42926972-42927067)
chr5 (1-97)||(28750679-28750774)
chr5 (33-162)||(10700608-10700736)
chr5 (7-97)||(29722579-29722668)
chr5 (7-97)||(29751184-29751273)
chr5 (1-82)||(8565985-8566065)
chr5 (10-97)||(25078177-25078265)
chr5 (10-97)||(25136146-25136234)
chr5 (10-97)||(40380147-40380235)
chr5 (10-97)||(40382358-40382446)
chr5 (1-83)||(8445764-8445846)
chr5 (43-97)||(19806453-19806507)
chr5 (7-97)||(29720419-29720508)
chr5 (11-61)||(35616228-35616278)
chr5 (10-97)||(16546687-16546775)
chr5 (10-97)||(10593315-10593402)
chr5 (38-97)||(16544493-16544553)
chr5 (10-97)||(22536314-22536400)
chr5 (267-317)||(317089-317138)
chr5 (33-70)||(5007812-5007849)
chr5 (175-224)||(8038418-8038467)
chr5 (272-317)||(10054610-10054655)
chr5 (177-225)||(10054713-10054761)
chr5 (181-241)||(40751202-40751262)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-124)||(27439-27562)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-162)||(7376-7535)
[»] scaffold0197 (1 HSPs)
scaffold0197 (175-315)||(1204-1344)
[»] scaffold0002 (2 HSPs)
scaffold0002 (10-97)||(434591-434677)
scaffold0002 (1-314)||(490125-490440)
[»] scaffold0016 (1 HSPs)
scaffold0016 (10-95)||(114660-114744)
[»] scaffold0491 (2 HSPs)
scaffold0491 (7-97)||(8759-8849)
scaffold0491 (7-97)||(11185-11275)
[»] scaffold1519 (1 HSPs)
scaffold1519 (10-97)||(974-1059)
[»] scaffold0286 (1 HSPs)
scaffold0286 (10-97)||(11615-11701)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-95)||(149123-149216)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-97)||(20439-20534)
[»] scaffold0674 (1 HSPs)
scaffold0674 (38-97)||(3750-3810)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-61)||(25102-25162)
[»] scaffold0565 (1 HSPs)
scaffold0565 (10-97)||(2628-2716)
[»] scaffold0927 (1 HSPs)
scaffold0927 (254-293)||(3407-3446)
[»] scaffold0137 (1 HSPs)
scaffold0137 (38-95)||(6357-6415)


Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 93 - 390
Target Start/End: Original strand, 10240263 - 10240559
Alignment:
Q  93 ggtcattgttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttg 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||            ||||||||||||||||||    
T  10240263 ggtcattgttggatcaaactaggtaaacatttcttggttttgttctcttttcttcactctctttatcttgtttattttttt-ggttcgattgtggttttg 10240361  T
Q  193 ctttacatttcgtttctagattagatctagattgttgttattgtttgtgactattttagttattgatatttgctccacgaatctaaatttcattgatgtg 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  10240362 ctttacatttcgtttctagattagatctagattgttgttattgtttgtggctattttagttattgatatttgctccacaaatttaaattacattgatgtg 10240461  T
Q  293 aaatttagagttaccgaattcacaagaatgttagatacttatgtttagtcaaaagaaaaaacatgtgatagttattttccttccattttagtcctttg 390  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10240462 aaatttggagttaccgaattcacaacaatgttagatacttatgtttagtcaaaagaaaaaacatgtgatatttatttttcttccattttagtcctttg 10240559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 4283573 - 4283732
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||| |||| | |||||||||  |    
T  4283573 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctcccctctagagtaggtca-ag 4283670  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  4283671 ttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 4283732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 42435110 - 42434951
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||  |    
T  42435110 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagaaatcaatctctcctccagagtaggtca-ag 42435013  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||  ||| |||||||||||    
T  42435012 ttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactttctttatcttg 42434951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11712120 - 11711993
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||| |||| | ||  ||||||||||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||||    
T  11712120 ttgttgaagctaatttcttgaaacccttttatatctctttgtaaataactcattgatagtggattgaagagatcaatctctccctcaaagtaggtcattg 11712021  T
Q  101 ttggatcaaactaggtaaacatttcttg 128  Q
    ||||  | || | |||||||||||||||    
T  11712020 ttggtcctaattgggtaaacatttcttg 11711993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 18655449 - 18655600
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||  |    
T  18655449 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattagagagatcaatctctcctccaaagtaggtca-ag 18655546  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctct 154  Q
    ||||| | |||| ||| ||||||| ||||| ||||| ||||||||  |||||||    
T  18655547 ttggaccgaactgggtgaacattttttggtgttgttatcttttctttactctct 18655600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 40328828 - 40329061
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||| || ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||        
T  40328828 ttgtttaaactaatttcttgtaactcattttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggt---- 40328922  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
     |||||   ||||  || ||||||||||||| ||||| ||||||||| |||||| || |||||            |||| ||||||||||||||| | ||    
T  40328923 -ttggacggaactgagtgaacatttcttggtgttgttatcttttctctactctccttttcttg--tttatcctttggttagattgtggttttgctatgca 40329019  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
     ||  ||||||||||||||||||| ||||||||||| |||||    
T  40329020 cttgttttctagattagatctagactgttgttattgcttgtg 40329061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 7597663 - 7597764
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||| ||| | | ||| ||||||||||||||||  |||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  7597663 ttgttgaagctaatttcttataatccttttgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctctcccccatagtaggtcattg 7597762  T
Q  101 tt 102  Q
    ||    
T  7597763 tt 7597764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10240203 - 10240264
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtgg 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10240203 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtgg 10240264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42498243 - 42498338
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||||| | ||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  42498243 ttgttgaagctaatttcttgtaacccttttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 42498338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 1746328 - 1746243
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||  ||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  1746328 ctaatttcttgtaacccttttgtatctctttg--aagaactcattgatagtggattggagagttcaatctctcctccatagtaggtca 1746243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 34256616 - 34256531
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  34256616 taatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctctagagtaggtca 34256531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3303789 - 3303694
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  3303789 ttgtttaacctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattgaagagatcaatctctcccccacagtaggtca 3303694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19491818 - 19491722
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcat 98  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  19491818 ttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattaaagagatcaatatctcccccatagtaggtcat 19491722  T

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Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 11384034 - 11384270
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| |||| |||||||| ||||||| ||| ||| |||||||||||| ||||||| |      
T  11384034 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaacccattgatactggattggagacatcgatctctcctccagagtaggtta-a 11384130  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
    |||||| | |||| ||| ||||||| ||||| ||||    ||||||  |||||||||||||||            |||| ||||||||||||||| | ||    
T  11384131 gttggaccgaactgggtgaacattttttggtgttgtctatttttctttactctctttatcttg--tttatcctttggttagattgtggttttgctatgca 11384228  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
     ||  ||||||||||||||||||||||||||||||| |||||    
T  11384229 cttgttttctagattagatctagattgttgttattgcttgtg 11384270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27811327 - 27811422
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| | |||||||    
T  27811327 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaacccattgatagtggattgaagagatcaatctctcccccagattaggtca 27811422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33352199 - 33352294
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  33352199 ttgttgaacctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 33352294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 44303913 - 44304023
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaa 109  Q
    |||||||||||||| | | ||| |||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||   ||||||| |    
T  44303913 ctaatttcttgtaatccttttgtatctctttttaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggatcga 44304011  T
Q  110 actaggtaaaca 121  Q
    ||||||| ||||    
T  44304012 actaggtgaaca 44304023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 17982712 - 17982797
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||| | ||| ||||||||| || ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  17982712 taatttcttgtaacccttttgtatctctttggaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 17982797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30143389 - 30143470
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  30143389 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 30143470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 34254440 - 34254355
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||| | ||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||||| | |||||||||    
T  34254440 taatttcttgtaacccttttgtatctctttgtaa-gaacttattgatagtggattggagagatcaatctctcctctagagtaggtca 34254355  T

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Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 1345487 - 1345395
Alignment:
Q  4 ttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| ||||||||||||||||    || ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  1345487 ttgaagctaatttcttgtaacccatatgtatctctttg-aaagaactcattgatagtggattgaagagttcaatctctcccccagagtaggtca 1345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 32902292 - 32902191
Alignment:
Q  2 tgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgt 101  Q
    ||||||| |||||||||||||||  | ||| |||||||| ||||||| |||||||||||| |||  |||||||||||||||| ||  |||||||||||||    
T  32902292 tgttgaagctaatttcttgtaacttttttgtatctctttctaaagaattcattgatagtgaatttgagagatcaatctctccccctgagtaggtcattgt 32902193  T
Q  102 tg 103  Q
    ||    
T  32902192 tg 32902191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 40221794 - 40221953
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| |||||||||||||| |||||||||||||||| ||| | |||||||  |    
T  40221794 ttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattggagagatcaatctctcccccagattaggtca-ag 40221891  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| || | |  ||||| ||||| |||| |||  |||||||||||||||    
T  40221892 ttggaccgaactgggtcaataatctttggtgttgttatcttgtctttactctctttatcttg 40221953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 15212835 - 15212930
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||| | |||||||    
T  15212835 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgataatggattggagagatcaatctctcccccagattaggtca 15212930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 241
Target Start/End: Original strand, 3772250 - 3772477
Alignment:
Q  10 ctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatca 108  Q
    ||||||||||||||| ||| ||| || ||||||||| ||| | ||||||||||||||| |||||||||||| ||   || |||||||||  |||||| ||    
T  3772250 ctaatttcttgtaactcat-ttgtatatctttgtaa-gaatttattgatagtggattggagagatcaatctatctctcagagtaggtcaa-gttggacca 3772346  T
Q  109 aactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacatttcgtttc 208  Q
    |||| | |||| ||||||||||  |||| ||||||||| |||||||||||||||            |||| ||||||||||||||| | || ||  ||||    
T  3772347 aactggataaatatttcttggtggtgttatcttttctctactctctttatcttg--tttattctttggttagattgtggttttgctatgcacttgatttc 3772444  T
Q  209 tagattagatctagattgttgttattgtttgtg 241  Q
    ||||||| ||||||||||||||| ||| |||||    
T  3772445 tagattaaatctagattgttgttgttgcttgtg 3772477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 145
Target Start/End: Complemental strand, 10930316 - 10930175
Alignment:
Q  3 gttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgtt 102  Q
    |||||| ||||||||||||||||   ||  |||||||||||| |||| |||||||||||||||| |||||||||||||||| ||| | |||||||  |||    
T  10930316 gttgaagctaatttcttgtaacccatttatatctctttgtaa-gaacacattgatagtggattggagagatcaatctctcccccagattaggtca-agtt 10930219  T
Q  103 ggatcaaactaggtaaac-atttcttggttttgttctcttttct 145  Q
    ||| | |||| ||| ||| |||||||||| ||||| ||||||||    
T  10930218 ggaccgaactgggtcaacaatttcttggtgttgttatcttttct 10930175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 31218315 - 31218401
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||||||||| || ||||||||||||||||||||  |||| ||||||||||||||| |||||||||    
T  31218315 ctaatttcttgtaacccttttgtatctctttggaa-gaactcattgatagtggattagagagttcaatctctcctccagagtaggtca 31218401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44353842 - 44353923
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  44353842 ttgttgaagctaatttcttgtaacacat-ttgtatctctttgtaa-gaactcattgatagtggattgaaaagatcaatctctcc 44353923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4731707 - 4731788
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  4731707 ttgttgaacctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcgatctctcc 4731788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12702753 - 12702672
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| |||||||||||||||| | |||  ||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  12702753 ttgttgaagctaatttcttgtaacccttttgtgtctctttgtaa-gaactcattgatattggattggagagatcaatctctcc 12702672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 5689329 - 5689401
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  5689329 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 5689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43036472 - 43036567
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||  ||| ||| |||||||||||| ||||||||||||||||||||  |||||||||||||||||||| | |||||||    
T  43036472 ttgttgaaactaatttcttgtaattcat-ttgtatctctttgtaa-gaactcattgatagtggatttgagagatcaatctctcctccagattaggtca 43036567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 19945470 - 19945383
Alignment:
Q  10 ctaatttcttgtaacca-tgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| | ||| ||||||||| || ||||||||||||||||||||| |||| ||||||||||||| | |||||||||    
T  19945470 ctaatttcttgtaaccacttttgtatctctttggaa-gaactcattgatagtggattggagagttcaatctctcctcgagagtaggtca 19945383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 29796441 - 29796317
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaa-ctcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| || ||||||||||||  | ||| | || |||||||| || |||||| ||| ||||||| |||||||||||||||| |||  ||||||||||    
T  29796441 ttgttgaagctgatttcttgtaacatttttgtacctatttgtaaaaaaactcatttataatggattggagagatcaatctctcccccaatgtaggtcatt 29796342  T
Q  100 gttggatcaaactaggtaaacattt 124  Q
    |||||| | |||| |||||||||||    
T  29796341 gttggaccgaacttggtaaacattt 29796317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 10015130 - 10015255
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||   | ||||||||||||||||||||| |||||| ||||||| |||||||||||||||      
T  10015130 ttgttgaagctaatttcttgtaactcat-ttgtatctctttt--aggaactcattgatagtggattggagagataaatctct-ctccatagtaggtca-a 10015224  T
Q  100 gttggatcaaactaggtaaacatttcttggt 130  Q
    |||||| | |||| ||||| |||||||||||    
T  10015225 gttggaccgaactgggtaatcatttcttggt 10015255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 1292582 - 1292456
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||  ||| || ||||||||| ||| |||||||||      
T  1292582 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggatttgagaaataaatctctcc-ccagagtaggtca-a 1292487  T
Q  100 gttggatcaaactaggtaaacatttcttggt 130  Q
    |||||| | |||| || ||||||||||||||    
T  1292486 gttggaccgaactgggcaaacatttcttggt 1292456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 3073981 - 3073870
Alignment:
Q  12 aatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaac 111  Q
    |||||||||||||  | ||| |||||||||||| ||||||||||||| ||| ||| |||||||||||||||| |||||||||||||  |||||  | |||    
T  3073981 aatttcttgtaacatttttgtatctctttgtaa-gaactcattgataatggcttggagagatcaatctctcc-ccatagtaggtca-agttgggccgaac 3073885  T
Q  112 taggtaaacatttct 126  Q
    | |||||||||||||    
T  3073884 tgggtaaacatttct 3073870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 15691109 - 15691163
Alignment:
Q  262 ttgctccacgaatctaaatttcattgatgtgaaatttagagttaccgaattcaca 316  Q
    ||||||||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  15691109 ttgctccacgaatctaaatttcattgatgtgaggtttggagttaccgaattcaca 15691163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18141869 - 18141950
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| ||| |||||||| |||||| |||||||||||||| ||||||||||||||||    
T  18141869 ttgttgaagctaatttcttgtaacccatttgtatcactttgtaa-gaactctttgatagtggattggagagatcaatctctcc 18141950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 2627827 - 2627880
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  2627827 aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 2627880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 4743291 - 4743238
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  4743291 aagaactcattgatagtggattggagagatcaatctctcccccaaagtaggtca 4743238  T

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Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40321129 - 40321224
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||  |||||||||||||||   | | ||||||||||||| ||||| |||||||||||||| |||||||||||||||| ||| | |||||||    
T  40321129 ttgttgaagttaatttcttgtaacccattagtatctctttgtaaa-aactctttgatagtggattggagagatcaatctctcccccagattaggtca 40321224  T

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Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 8965810 - 8965689
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||||||  ||||||||| ||||| | ||  |||||||||||| |||||||||||||||| || | |||||| ||||||||| ||||| |||||||  |    
T  8965810 ttgttgaagttaatttcttataacccttttatatctctttgtaa-gaactcattgatagtgcatcggagagataaatctctcccccatattaggtca-ag 8965713  T
Q  101 ttggatcaaactaggtaaacattt 124  Q
    ||||| | |||| |||||||||||    
T  8965712 ttggaccgaactgggtaaacattt 8965689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 38863948 - 38864007
Alignment:
Q  43 aaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgtt 102  Q
    ||||||||| |||||||||||||| ||||||||||||| ||| |||||||||| ||||||    
T  38863948 aaagaactcgttgatagtggattggagagatcaatctcccctgcatagtaggttattgtt 38864007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1822341 - 1822423
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| |||||||||||||||| | ||  |||| |||||||| |||||| | |||||| |||| ||||||||||||||||    
T  1822341 ttgttgaagctaatttcttgtaacccttttatatctatttgtaaataactcactaatagtgaattggagagatcaatctctcc 1822423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1856786 - 1856868
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| |||||||||||||||| | ||  |||| |||||||| |||||| | |||||| |||| ||||||||||||||||    
T  1856786 ttgttgaagctaatttcttgtaacccttttatatctatttgtaaataactcactaatagtgaattggagagatcaatctctcc 1856868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 4162546 - 4162668
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||| |||||||||||||||| |||||| ||| |||||||||||| | | |||||||||      
T  4162546 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgt-aagaactcattgatag-ggattggagatatcaatctctccccaagagtaggtca-a 4162641  T
Q  100 gttggatcaaactaggtaaacatttct 126  Q
    |||||| | || | |||||||||||||    
T  4162642 gttggaccgaattgggtaaacatttct 4162668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 6599063 - 6599116
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||| |||||||    
T  6599063 aagaactcattgatagtggattagagagatcaatctctcccccatattaggtca 6599116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 6674516 - 6674569
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||| |||||||    
T  6674516 aagaactcattgatagtggattagagagatcaatctctcccccatattaggtca 6674569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 3439561 - 3439647
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  |||||||||||||| |||||||||    
T  3439561 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtca 3439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30291656 - 30291737
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||| ||| ||| ||| |||||||| ||| || |||||||||||||| ||||||||||||||||    
T  30291656 ttgttgaagctaatttcttgtaactcat-ttgtatcactttgtaa-gaattctttgatagtggattggagagatcaatctctcc 30291737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 41366733 - 41366652
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||| || |||||||||| |||||   ||| ||| |||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  41366733 ttgtttaagctaatttcttttaacctatttgtatccctttgtaa-gaactcatttatagtggattggagagatcaatctctcc 41366652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 9765803 - 9765863
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagag 71  Q
    ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||    
T  9765803 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagag 9765863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3231915 - 3231859
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgat 57  Q
    |||||||| ||||||| || ||||||| ||| |||||||||||||||||| ||||||    
T  3231915 ttgttgaagctaattttttttaaccattttgtatctctttgtaaagaacttattgat 3231859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 3772505 - 3772569
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaaatttagagtt-accgaattcacaa 317  Q
    |||||||  |||||||||||||||||||||||||||||||  ||| || || |||||||||||||    
T  3772505 attgatacctgctccacgaatctaaatttcattgatgtgaggtttggaattgaccgaattcacaa 3772569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 4733787 - 4733850
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||| ||| ||||||||||||||||| ||||||| |||||||| ||| | |||||||    
T  4733787 atctctttgtaa-gaattcattgatagtggattggagagatcgatctctcccccagattaggtca 4733850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8153807 - 8153886
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctct 81  Q
    |||||||| |||| ||| ||||||  | ||| || ||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  8153807 ttgttgaagctaaattcgtgtaactcttttgtatatctttgtaa-gaactcattgatagttgattggagagatcaatctct 8153886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 15290608 - 15290668
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  15290608 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 15290668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 15470977 - 15471037
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  15470977 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 15471037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 42575408 - 42575348
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  42575408 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 42575348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 7624894 - 7624812
Alignment:
Q  175 ggttcgattgtggttttgctttacatttcgtttctagattagatctagatt-gttgttattgtttgtgactattttagttattg 257  Q
    ||||||||||||||||| |||||||  | ||| |||| ||||||||||||| |||||| ||||||| | ||||||| |||||||    
T  7624894 ggttcgattgtggttttactttacacatggttgctag-ttagatctagattcgttgttgttgtttgcggctattttggttattg 7624812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 25690012 - 25690098
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  ||| |||||||||| |||||||||    
T  25690012 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtca 25690098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 40329089 - 40329128
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  40329089 attgatacttgctctacgaatctaaatttcattgatgtga 40329128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 18655627 - 18655688
Alignment:
Q  180 gattgtggttttgctttacatttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
    ||||||||||||||| | || || |||| |||| |||||||| ||||||||||||| |||||    
T  18655627 gattgtggttttgctatgcacttggtttatagactagatctatattgttgttattgcttgtg 18655688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 40222036 - 40222076
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaa 294  Q
    ||||||| || |||||| |||||||||||||||||||||||    
T  40222036 attgatactttctccacaaatctaaatttcattgatgtgaa 40222076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 4e-48; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 8359436 - 8359197
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||| || |||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  8359436 ttgtttaaactaatttcttgtaacccattttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcatt 8359338  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
    |||||| | |||| ||| ||||||||||||| ||||| ||||||||| |||||| ||||||||            |||| ||||||||||||||| | ||    
T  8359337 gttggaccgaactgggtgaacatttcttggtgttgttatcttttctctactctcattatcttg--tttatcctttggttagattgtggttttgctatgca 8359240  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtga 242  Q
     ||  ||||||||||||||||||||||||||| ||| ||||||    
T  8359239 cttgttttctagattagatctagattgttgttgttgcttgtga 8359197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 32358173 - 32358014
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  32358173 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 32358076  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||  |||||||||| ||||    
T  32358075 ttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttaacttg 32358014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 22328510 - 22328185
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||  | ||| ||||||||| || ||| ||||| ||||||||||  |||||||||||||||| | | ||||||||||||    
T  22328510 ttgttgaagctaatttcttgtaactcttttgtatctctttgcaaggaagtcattaatagtggatttgagagatcaatctctcccctagagtaggtcattg 22328411  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacat 200  Q
    ||||| | |||| |||||| |||| ||||| ||||| ||||||||| |||||||||||||||             ||||||||||||||||| | | ||     
T  22328410 ttggaccgaactgggtaaatattttttggtgttgttatcttttctctactctctttatcttgtttattctttt--gttcgattgtggttttgttatgcac 22328313  T
Q  201 ttcgtttctagattagatctagattgttgttattgtttgtgactatttta----------gttattgatatttgctccacgaatctaaatttcattgatg 290  Q
    || |||||| |||||||||||||||||| || || ||| ||  |||||||          || ||| ||| || ||||||||||||||||||||||||||    
T  22328312 ttggtttctcgattagatctagattgtttttgttatttctggttattttaattatttgttgtcattaatacttactccacgaatctaaatttcattgatg 22328213  T
Q  291 tgaaatttagagtt-accgaattcacaa 317  Q
    ||| |||| || || |||||||||||||    
T  22328212 tgagatttggaattgaccgaattcacaa 22328185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29608786 - 29608945
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| ||| ||||||| |||||||| |||||||||      
T  29608786 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagatatcaatcactcctccagagtaggtca-a 29608882  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | ||||  || || |||||||||| ||||| ||||||||| |||||||||||||||    
T  29608883 gttggaccgaactgagtgaatatttcttggtgttgttatcttttctctactctctttatcttg 29608945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 2390331 - 2390571
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| ||||||||||||  |||||||  ||||||||||| |||||||||||||||||||| |||||||||  |    
T  2390331 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaat-aactcatatatagtggattggagagatcaatctctcctccagagtaggtca-ag 2390428  T
Q  101 ttggatcaaactaggt-aaacatttcttggttttgttct---cttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgcttt 196  Q
    ||||| | |||||||| ||  || ||||||| ||||| |    ||||||| |||||||||||||||             ||| ||||||||||||||| |    
T  2390429 ttggaccgaactaggtgaataatctcttggtgttgttgtttatttttctctactctctttatcttgtttatcctttt--gttggattgtggttttgctat 2390526  T
Q  197 acatttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
    ||||||  ||||||||||||||||||||||||||||||| |||||    
T  2390527 acatttgttttctagattagatctagattgttgttattgattgtg 2390571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34310835 - 34310675
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||      
T  34310835 ttgttgaagctaatttcttgtaacacat-ttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaag 34310738  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
     ||||| | |||| ||| |||| |  ||||| ||||| ||||||||  |||||||||||||||    
T  34310737 tttggaccgaactgggtgaacaatctttggtgttgttatcttttctttactctctttatcttg 34310675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 3259044 - 3259280
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||| || ||||||| ||||||| ||| ||| ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||      
T  3259044 ttgtttaagctaatttattgtaactcat-ttgtatctctttgtaaa-aacccattgatagtggattggagagatcaatctctcctccagagtaggtca-a 3259140  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
    |||| | | |||| ||| |||||||| |||| ||||| ||||||||  |||||||||||||||            |||| ||||||||||||||| | |     
T  3259141 gttgaaccgaactgggtgaacatttcctggtgttgttatcttttctttactctctttatcttg--tttattccttggttggattgtggttttgctatgcc 3259238  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
      |  ||||||||||||||||||||||||||||||| |||||    
T  3259239 cgtgttttctagattagatctagattgttgttattgcttgtg 3259280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 4508822 - 4508666
Alignment:
Q  4 ttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttg 103  Q
    ||||| ||||||||||||||||   ||| |||||||||||| ||||||||||| ||||||||| |||||||||||||| || || ||||||| |  ||||    
T  4508822 ttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgagagtggattggagagatcaatctcttcttcagagtaggtta-agttg 4508725  T
Q  104 gatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    || | |||| ||| ||||||||||||| ||||| | ||||||  |||||||||||||||    
T  4508724 gaccgaactgggtgaacatttcttggtgttgttatattttctttactctctttatcttg 4508666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 4510664 - 4510508
Alignment:
Q  4 ttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttg 103  Q
    ||||| ||||||||||||||||   ||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||  | |||||||||  ||||    
T  4510664 ttgaagctaatttcttgtaacccatttgtatctctttataa-gaactcattgatagtggattgaagaaatcaatctctcctgtagagtaggtca-agttg 4510567  T
Q  104 gatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    || |  ||| ||| ||||||||||||| ||||| ||||||||  |||||||| ||||||    
T  4510566 gaccgtactgggtgaacatttcttggtgttgttatcttttctttactctcttgatcttg 4510508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 4512506 - 4512350
Alignment:
Q  4 ttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttg 103  Q
    ||||| ||||||||||||||||   ||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||  | |||||||||  ||||    
T  4512506 ttgaagctaatttcttgtaacccatttgtatctctttataa-gaactcattgatagtggattgaagaaatcaatctctcctgtagagtaggtca-agttg 4512409  T
Q  104 gatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    || |  ||| ||| ||||||||||||| ||||| ||||||||  |||||||| ||||||    
T  4512408 gaccgtactgggtgaacatttcttggtgttgttatcttttctttactctcttgatcttg 4512350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 48599453 - 48599294
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||| || || |||||||||||||||||| |||||||||||||||||||| || || |||      
T  48599453 ttgttgaagctaatttcttgtaactcat-ttgtatctctttggaa-gagctcattgatagtggattggagagatcaatctctcctccagagcagatca-a 48599357  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | |||| ||| ||||||||||| | ||||| ||||||||  |||||||||||||||    
T  48599356 gttggaccgaactgggtgaacatttcttgatgttgttatcttttctttactctctttatcttg 48599294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4253648 - 4253520
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||| ||||||| | ||  ||||||||| |||||||||||||||| ||||||  ||||||||||||||||  || ||||||||| |     
T  4253648 ttgttgaagctaatttcatgtaacccttttatatctctttggaaagaactcattgataatggattagagagatcaatctctcccacagagtaggtcaat- 4253550  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| | ||||||||||||||||||||||    
T  4253549 ttggaccgaactaggtaaacatttcttggt 4253520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 22270022 - 22270149
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  22270022 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactgattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 22270119  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| | |||| ||| ||||| |||||||    
T  22270120 ttggaccgaactgggtgaacatctcttggt 22270149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 6360071 - 6359929
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||| ||||| |||||||||||||| | ||||| |||||||  |    
T  6360071 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagttgattggagagatcaatctcttccccatattaggtca-ag 6359974  T
Q  101 ttggatcaaactaggtaaac-atttcttggttttgttctcttttc 144  Q
    ||||||| |||| ||| ||| |||||||||| ||||| |||||||    
T  6359973 ttggatcgaactgggtcaacaatttcttggtgttgttatcttttc 6359929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23555089 - 23555184
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||||  | ||| | |||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  23555089 ttgttgaagctaatttcttgtaacacttttgtacctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 23555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 35853972 - 35854058
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  35853972 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 35854058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 36574635 - 36574510
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||| | ||  |||||||||||||||||||||||||||||| ||| |||||||||||  ||| | | ||||||||| |     
T  36574635 ttgttgaagctaatttcttgtaacccttttatatctctttgtaaagaactcattgatagtggtttggagagatcaatccatcc-ctagagtaggtcaat- 36574538  T
Q  101 ttggatcaaactaggtaaacatttcttg 128  Q
    ||||| |||||| |||||||||||||||    
T  36574537 ttggaccaaactgggtaaacatttcttg 36574510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 6432020 - 6432115
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| |||||||||||||| ||||||||||||||||| || |||||||||    
T  6432020 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattggagagatcaatctctccttcagagtaggtca 6432115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27347866 - 27347961
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  27347866 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattgcagagatcaatctctcccccagattaggtca 27347961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 48491628 - 48491723
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| ||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  48491628 ttgttgaagctaatttcttgtaacccatttgtatctctttg-aaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca 48491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 19502236 - 19502322
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||  | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| ||||    
T  19502236 ctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaagtca 19502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 29991111 - 29991197
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||| |||  |||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  29991111 ctaatttcttgtaacccttttgtatctctttctaat-aactcattgatagtggattggagagatcaatctctcctccagagtaggtca 29991197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 18396367 - 18396488
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||| ||| ||||||| || ||| |||||||| ||||||| |||||||||| |||||| |||||||||||||||||| | ||||||||| ||    
T  18396367 ttgttgaacctatttttttgtaac-attttgtatctctttataaagaattcattgatagaggattggagagatcaatctctcctcaagagtaggtcaatg 18396465  T
Q  101 ttggatcaaactaggtaaacatt 123  Q
     |||| | |||| ||||||||||    
T  18396466 gtggaccgaactgggtaaacatt 18396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 47674062 - 47673981
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  47674062 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 47673981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 3904733 - 3904633
Alignment:
Q  4 ttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttg 103  Q
    |||||| ||||||||||||||  | ||| |||||||||||||||||||||||||||| |||   ||||||||||||||||  || |||||||||||||||    
T  3904733 ttgaatgtaatttcttgtaacacttttgcatctctttgtaaagaactcattgatagt-gatcagagagatcaatctctccctcagagtaggtcattgttg 3904635  T
Q  104 ga 105  Q
    ||    
T  3904634 ga 3904633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23565180 - 23565100
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctc 82  Q
    |||||||| |||||||||||||||  | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  23565180 ttgttgaaactaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctc 23565100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 39731424 - 39731513
Alignment:
Q  8 atctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||||  | ||| ||||||||   ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  39731424 atctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 39731513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 496102 - 496007
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||| ||||   ||| |||||||| ||| ||||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  496102 ttgttgaagctaatttcttgcaacccatttgtatctctttataa-gaactcattgatagtggattggagagatcaatctctcccctatagtaggtca 496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 1113706 - 1113801
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||| |||||   ||| |||||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||| |||||||    
T  1113706 ttgttgaagctaatttcttataacccatttgtatctctttgtaa-gaactcattgatagtagattggagagatcaatctctcccccatattaggtca 1113801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 4178832 - 4178917
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||  ||||||||||||||||||||||||| || ||||||||||||||| || ||||||    
T  4178832 ctaatttcttgtaacccttttgtatctctttg--aagaactcattgatagtggattgaacagttcaatctctcctccagagcaggtca 4178917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5116653 - 5116757
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||||||  |||||| |||||| | | ||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||| |||||| |  ||||||    
T  5116653 ttgttgaagataatttattgtaaaccttttgtatctctttgtaaagaactcattgatagtgaattggagagataaatctctcccccatagcaaatcattg 5116752  T
Q  101 ttgga 105  Q
    |||||    
T  5116753 ttgga 5116757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 30024851 - 30024756
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| |||||||||||||| ||||||||||| |||| ||| |||||||||    
T  30024851 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatcactcccccagagtaggtca 30024756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 47676255 - 47676160
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||| |||||||||| || |||||||||||||||| ||||| |||||||    
T  47676255 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcaatgatagtggaatggagagatcaatctctcccccatattaggtca 47676160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 43504269 - 43504178
Alignment:
Q  7 aatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||||| | | ||| ||||||||   |||||||||||||||||| |||| |||| |||||||||||||||||||||||||    
T  43504269 aatctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtgaattggagagttcaatctctcctccatagtaggtca 43504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 14069943 - 14069871
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  14069943 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 14069871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 14379971 - 14379899
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  14379971 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 14379899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 31105512 - 31105385
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||| ||||||| |||||||||||| |||||||| |||||| ||||||||| | | ||||| |||  |    
T  31105512 ttgttgaagctaatttcttgtaacccatttgtatctttttgtaa-gaactcattgatggtggattggagagataaatctctccccaagagtagatca-ag 31105415  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| | |||| |||||||||||||||||    
T  31105414 ttggaccgaactgggtaaacatttcttggt 31105385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4586210 - 4586297
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccata 89  Q
    |||||||| ||||||| ||||||||   ||  |||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  4586210 ttgttgaagctaattttttgtaacccatttttatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccata 4586297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25615902 - 25615997
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| |||  ||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  25615902 ttgtttaagctaatttcttgtaacccatttgtatcattttgtaa-gaactcattgatagtggattagagagatcaatctctcctccagagtaggtca 25615997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 25767071 - 25766984
Alignment:
Q  10 ctaatttcttgtaacca-tgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||  | ||| |||||||| | ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  25767071 ctaatttcttgtaaccccttttgtatctcttt-tgaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 25766984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 31733084 - 31732993
Alignment:
Q  5 tgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||| ||||||||||||||||   ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||| | |||||||    
T  31733084 tgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatactggattggagagatcaatctctcccccaaattaggtca 31732993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 36146526 - 36146432
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||| ||||||   ||| |||||||||||| ||||||||||||||||||||  |||||||||||||||| ||||| |||||||    
T  36146526 ttgttgaagctaatttct-gtaacccatttgtatctctttgtaa-gaactcattgatagtggatttgagagatcaatctctcccccatattaggtca 36146432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 41649121 - 41649035
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||   ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  41649121 ctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccaaattaggtca 41649035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26417365 - 26417446
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||  |||||||||||||||   ||| |||||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  26417365 ttgttgaagataatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattggagagatcaatctctcc 26417446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2361091 - 2360996
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||  ||| |||||||||||| ||| | |||||||    
T  2361091 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggatttgagatatcaatctctcccccagattaggtca 2360996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43864293 - 43864373
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctc 82  Q
    |||||||| |||||||| |||||||   ||| ||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  43864293 ttgttgaagctaatttcctgtaacccatttgtatctctttgtaaa-aactaattgatagtggattggagagatcaatctctc 43864373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 317
Target Start/End: Complemental strand, 1360120 - 1359978
Alignment:
Q  176 gttcgattgtggttttgctttacatttcgtttctagattagatct-agattgttgttattgtttgtgactattttagtt---attgatatttgctccacg 271  Q
    |||||||||||||||||||||||| || |||| |||||||||||| | ||||||||| ||| |||||  ||  ||||||   ||||||| || | ||||     
T  1360120 gttcgattgtggttttgctttacacttagtttttagattagatctaaaattgttgttgttgcttgtggtta--ttagtttacattgatactt-caccaca 1360024  T
Q  272 aatctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    |||||||||||||||| ||| | ||||  |||||||||||||||||    
T  1360023 aatctaaatttcattggtgtaagatttgaagttaccgaattcacaa 1359978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 8153400 - 8153486
Alignment:
Q  10 ctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||| ||| ||| ||||||||||||  |||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  8153400 ctaatttcttgtaactcat-ttgtatctctttgtaat-aactcattgatagtggattggagagatcaatctctcccccagattaggtca 8153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18126693 - 18126788
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||  |||||||||||| ||| | |||||||    
T  18126693 ttgttcaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggaggaatcaatctctcccccagactaggtca 18126788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 26639411 - 26639475
Alignment:
Q  39 ttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttg 103  Q
    ||||||| ||||| |||||| ||||||  ||||||||||||||||||||||||| ||||||||||    
T  26639411 ttgtaaataactctttgataatggattagagagatcaatctctcctccatagtatgtcattgttg 26639475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 41317544 - 41317458
Alignment:
Q  10 ctaatttcttgtaa-ccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||| |||| ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  41317544 ctaatttcttgtaatccat-ttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 41317458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 48489480 - 48489575
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| ||||||||| ||  |||||||| ||||||||||| |||||||||||||||| ||| | |||||||    
T  48489480 ttgttgaagctaatttcttgtaacccatttgtatctctttgcaat-aactcattcatagtggattggagagatcaatctctcccccagattaggtca 48489575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 8452148 - 8452088
Alignment:
Q  175 ggttcgattgtggttttgctttacatttcgtttctagattagatctagattgttgttattgtt 237  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||||||  |||||||||||    
T  8452148 ggttcgattgtggttttgctttacatttgatttttagattagatctagat--ttgttattgtt 8452088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 24525589 - 24525540
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  24525589 atctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 24525540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 30814530 - 30814580
Alignment:
Q  47 aactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  30814530 aactcattgatagtggattggagagatcaatctctcccccatattaggtca 30814580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 31518983 - 31519079
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctc-ctccatagtaggtcattgttggatcaaactaggtaaacatttcttggt 130  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||||| | ||| |||||||||  |||||| | |||| | |||||||||||||||    
T  31518983 atctctttgtaa-gaactcattgacagtggattggagagatcaatctctctccccagagtaggtca-agttggaccgaactggataaacatttcttggt 31519079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2759316 - 2759237
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctct 81  Q
    |||||||| ||||||||||||||| ||| ||  |||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  2759316 ttgttgaagctaatttcttgtaactcat-ttatatctctttgtaa-gaactcattgatagtggattggagatatcaatctct 2759237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 18388872 - 18388784
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  18388872 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 18388784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 18392308 - 18392220
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  18392308 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 18392220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 32060406 - 32060346
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  32060406 tttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 32060346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 48408860 - 48408948
Alignment:
Q  10 ctaatttcttgtaacca-tgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||  | ||| ||||||||  ||| |||||||||||||||||||| |||| | ||||||||||||| |||| ||||    
T  48408860 ctaatttcttgtaaccccttttgtatctcttttgaaataactcattgatagtggattggagagtttaatctctcctccagagtatgtca 48408948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 5513754 - 5513661
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttg 128  Q
    |||||||||||||||||||||||| | || |||| ||| ||||||||| |||||| ||||||||| | |||||   |||| |||||||||||||||    
T  5513754 atctctttgtaaagaactcattgacactgaattggaga-atcaatctcacctccagagtaggtcaat-ttggactgaactgggtaaacatttcttg 5513661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 320
Target Start/End: Original strand, 26639647 - 26639694
Alignment:
Q  273 atctaaatttcattgatgtgaaatttagagttaccgaattcacaagaa 320  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||    
T  26639647 atctaaattttattgatgtgagatttggagttaccgaattcacaagaa 26639694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23344024 - 23344149
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||| | | | || |||||||  |||||||||||||| | ||||| ||| || ||||||||  ||| |||||||||  |    
T  23344024 ttgttgaagctaatttcttgtaaccctttagtatatctttgt-gagaactcattgataatagattggagaaattaatctctc--ccagagtaggtca-ag 23344119  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| | ||| ||||||||||||||||||    
T  23344120 ttggaccgaacaaggtaaacatttcttggt 23344149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 6592452 - 6592364
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  6592452 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 6592364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 6594670 - 6594582
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  6594670 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 6594582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 38671299 - 38671246
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||| | |||||||    
T  38671299 aagaactcattgatagtggattgaagagataaatctatcccccaaaataggtca 38671246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 20343954 - 20344041
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  20343954 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 20344041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 293
Target Start/End: Original strand, 29608986 - 29609083
Alignment:
Q  204 gtttctagattagatctagattgttgttattgtttgtgactattt--------tagttattgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| |||||||||||||||||||| ||| |||||  |||||        | || ||||||| ||||||||||||||||||||||||| ||||||    
T  29608986 gtttctatattagatctagattgttgttgttgcttgtggttatttacatttggttgtcattgatacttgctccacgaatctaaatttcattaatgtga 29609083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 2390599 - 2390638
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  2390599 attgatacttgctccactaatctaaatttcattgatgtga 2390638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 8359173 - 8359134
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| |||||||||||||||||||||||||| |||||    
T  8359173 attgatacttgctccacgaatctaaatttcattggtgtga 8359134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 43363593 - 43363478
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctct--ttgtaaagaactcattgatagtggattgaagagatcaatctctcctccata-gtaggtca 97  Q
    |||||||| ||||||| |||||||  | ||| ||||||  ||||||| ||||||||||||||| | || | |||||  ||||||||||||| || |||||    
T  43363593 ttgttgaaactaatttattgtaactcttttgtatctctatttgtaaataactcattgatagtgaagtggatagatc--tctctcctccatatgttggtca 43363496  T
Q  98 ttgttggatcaaactagg 115  Q
    |||||||  |||||||||    
T  43363495 ttgttgggccaaactagg 43363478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 1560744 - 1560690
Alignment:
Q  44 aagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  1560744 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 1560690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 5116929 - 5116970
Alignment:
Q  276 taaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    |||||||||||||||||| ||||| |||||| ||||||||||    
T  5116929 taaatttcattgatgtgagatttaaagttactgaattcacaa 5116970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 48599191 - 48599154
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgt 291  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  48599191 attgatacttgctccacgaatctaaattttattgatgt 48599154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 24789899 - 24789985
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||| || ||| ||| |||| ||||| ||||| |||||||||||||| ||||  | |||||||||||| |||||||||    
T  24789899 ctaatttcttgtaac-attttgtatcccttttgtaaa-aactctttgatagtggattggagagtactatctctcctccagagtaggtca 24789985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 4e-48; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33648220 - 33648381
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||| ||||||| | ||| || |||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||    
T  33648220 ttgttgaagctaatttcctgtaacccttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctcctccagagtaggtcattg 33648319  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  33648320 ttggaccgaactgggtaaacatttattggtgttgttgtcttttctctactctctttatcttg 33648381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 35447003 - 35446844
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||||||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||||||  |    
T  35447003 ttgttgaatctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcactctctcctccagagtaggtca-ag 35446906  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  35446905 ttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 35446844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 24398106 - 24398271
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||    
T  24398106 ttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctctcccccatagtaggtcattg 24398205  T
Q  101 ttggatcaaactaggtaaac-atttcttggttttgttctc---ttttctccactctctttatcttg 162  Q
    ||||| | |||| | | ||| ||| |||||| ||||| ||   ||||||| |||||||||||||||    
T  24398206 ttggaccgaactggctgaacaattacttggtgttgttatctatttttctctactctctttatcttg 24398271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 45726978 - 45727136
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  45726978 ttgttgaagctaatttcttgtaacctatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 45727075  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatctt 161  Q
    ||||| | |||| ||| ||||||| || || ||||| ||||||||  ||||||||||||||    
T  45727076 ttggaccgaactgggtgaacattttttagtgttgttatcttttctttactctctttatctt 45727136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 4 - 162
Target Start/End: Complemental strand, 30218161 - 30218004
Alignment:
Q  4 ttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttg 103  Q
    ||||| |||||||||||||||||| ||| ||||||||||||| || ||||||||||||| ||||| ||||||||| |||| ||| |||| ||||||||||    
T  30218161 ttgaagctaatttcttgtaaccattttgtatctctttgtaaataattcattgatagtgggttgaaaagatcaatcactcccccagagtaagtcattgttg 30218062  T
Q  104 gatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||   |||| ||||||||||| ||||| | | ||| ||||||| |||||||||||||||    
T  30218061 gactgaactcggtaaacattttttggtgtagctct-ttttctctactctctttatcttg 30218004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6595125 - 6595030
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||||| | ||| |||||||||||| |||||| |||||||||||||| |||||||||||||||||||| |||||||||    
T  6595125 ttgttgaagctaatttcttgtaacccttttgaatctctttgtaa-gaactcgttgatagtggattggagagatcaatctctcctccagagtaggtca 6595030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2334537 - 2334442
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||| |||||  | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  2334537 ttgttgaagctaatttctagtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 2334442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 28671989 - 28672097
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaa 110  Q
    ||||||||||| ||| | ||| ||||||||  |||||||||| ||| ||||||||| |||||||||||||||||||| ||||||||||||||||| | ||    
T  28671989 taatttcttgttaccgttttgtatctctttacaaagaactcactgacagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 28672088  T
Q  111 ctaggtaaa 119  Q
     ||||||||    
T  28672089 ttaggtaaa 28672097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 36988186 - 36988100
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||  | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  36988186 ctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 36988100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17490267 - 17490143
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||  | ||| | |||||||||| ||||||||||||||||||||| |||||||||||||||| | | ||||||||| |     
T  17490267 ttgttgaagctaatttcttgtaactcttttgtaactctttgtaa-gaactcattgatagtggattgtagagatcaatctctcccctagagtaggtcaat- 17490170  T
Q  101 ttggatcaaactaggtaaacatttctt 127  Q
    ||||| | |||| ||||||||||||||    
T  17490169 ttggaccgaactgggtaaacatttctt 17490143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 1631851 - 1631692
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||| ||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||  |    
T  1631851 ttgttgaagctaatatcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagaaatcaatctctcctccagagtaggtca-ag 1631754  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | ||||  || || ||||||| || ||||| |||||||    ||||||||||||||    
T  1631753 ttggaccgaactgagtgaatatttcttagtgttgttatcttttccttgctctctttatcttg 1631692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 5723366 - 5723282
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggt 95  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  5723366 ctaatttcttgtaacctttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctctagagtaggt 5723282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 4484441 - 4484354
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||||||||   ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  4484441 ctaatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 4484354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 7451167 - 7451404
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||  ||| ||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||| | |||||||||      
T  7451167 ttgttgaagctaatttcttgtaattcat-ttgtatctctttgtaat-aactcattgatagtggattgcagagatcaatctctcctctacagtaggtca-a 7451263  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctc--cactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgcttta 197  Q
    |||||| | |||| ||| ||||||| ||||| ||||    |||||||  | ||||||||||||||            |||||||||||||||||| | |     
T  7451264 gttgga-cgaactgggtgaacatttattggtgttgtctatttttctctactctctctttatcttg--tttattctttggttcgattgtggttttgttatg 7451360  T
Q  198 catttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
    || ||  ||||||||||||||||||||||||||||||| |||||    
T  7451361 cacttgttttctagattagatctagattgttgttattgcttgtg 7451404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 30833404 - 30833490
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||| | ||| ||||||||   ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  30833404 taatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 30833490  T

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Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 4503242 - 4503157
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||  | ||| |||||||||  ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  4503242 ctaatttcttgtaactcttttgtatctctttg--aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 4503157  T

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Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 42019992 - 42019861
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaa--ctcattgatagtggattgaagagatcaatctctcctccatagtaggtcat 98  Q
    |||| ||| |||||||||||||||  | ||| ||||||||||||| ||  ||||||||||||| |||  |||||||||||||| | ||||||||||| ||    
T  42019992 ttgtagaagctaatttcttgtaactcttttgtatctctttgtaaaaaaaactcattgatagtgaatttgagagatcaatctcttccccatagtaggttat 42019893  T
Q  99 tgttggatcaaactaggtaaacatttcttggt 130  Q
    ||||||| |||| | | |||||| ||||||||    
T  42019892 tgttggaccaaattggataaacacttcttggt 42019861  T

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Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 45099813 - 45099898
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||  | ||| |||||||||  ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  45099813 ctaatttcttgtaactcttttgtatctctttg--aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 45099898  T

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Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 17450671 - 17450863
Alignment:
Q  46 gaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggttttgttctcttttct 145  Q
    ||||||||||||||||||||| ||||||||||||||||  || |||||||||  |||||| | |||||||| |||| |  ||||| ||||| ||||||||    
T  17450671 gaactcattgatagtggattggagagatcaatctctcc-acagagtaggtca-agttggaccgaactaggtgaacaatctttggtgttgttatcttttct 17450768  T
Q  146 ccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacatttcgtttctagattagatctagattgttgttattgtttgtga 242  Q
      |||||||||||||||            |||| ||||||||||||||| | || || ||||||||||||| | |||||||||||| ||| ||||||    
T  17450769 gtactctctttatcttg--tttatcctttggttagattgtggttttgctatgcacttggtttctagattaggtttagattgttgttgttgcttgtga 17450863  T

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Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 36318128 - 36318047
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||| ||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  36318128 ttgttgaaactaatttattgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 36318047  T

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Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38312289 - 38312370
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| || |||||||||||||||||| ||||||||||||||||    
T  38312289 ttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gatctcattgatagtggattggagagatcaatctctcc 38312370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 42261605 - 42261290
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatca--atctctcctccatagtaggtcat 98  Q
    |||||||| |||||||||||||||  | ||| || ||||||||||| |||||||||||||| |  | ||||||||   ||||||| ||||||||||| |     
T  42261605 ttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgatagtgaagcggagagatcattctctctcccccatagtaggttag 42261506  T
Q  99 tgttggatcaaactaggtaaac-atttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgcttta 197  Q
    ||||| |   |||| ||||||| |||  ||| | ||||||| ||||||  |||||||||||||||            |||| | ||||||||||||| ||    
T  42261505 tgttgaactgaactgggtaaacaattatttgatgttgttct-ttttctttactctctttatcttg----attattttggtttgtttgtggttttgctata 42261411  T
Q  198 catttcgtttctagattagatctagat-tgttgttattgtttgtgactattttagtt---attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    || || ||| ||||||||||||||||| | ||||| ||| ||| |  |||||| |||   ||||||| ||||||||| ||||||||||||||||| ||||    
T  42261410 cacttggttgctagattagatctagatatattgttgttgcttgcggttattttggttgccattgatacttgctccacaaatctaaatttcattgacgtga 42261311  T
Q  294 aatttagagttaccgaattca 314  Q
     |||   ||||||||||||||    
T  42261310 gattagaagttaccgaattca 42261290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11049602 - 11049698
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttgg-atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||| ||||| | || | |||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||| |||||||    
T  11049602 ttgttgaagctaatttcttataacccttttagtatctctttgtaa-gaactcattgatagtagattgaaaagatcaatctctccttcataataggtca 11049698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 17057488 - 17057393
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  17057488 ttgttgaagctaattttttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagactaggtca 17057393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 17085471 - 17085376
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  17085471 ttgttgaagctaattttttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagactaggtca 17085376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 723863 - 723768
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  723863 ttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 723768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 11067363 - 11067449
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||   ||| |||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||| | |||||||    
T  11067363 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcatttataatggattgaagagatcaatctctcccccagattaggtca 11067449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13121818 - 13121901
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctcca 87  Q
    ||||||||  ||||||||||||||| |  || ||||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  13121818 ttgttgaagataatttcttgtaacctt--tgtatctctttgtaga-aactcattgatagtggattgaagaaatcaatctctcctcca 13121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 29867927 - 29868013
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||   ||| |||||||||||| |||||| |||||||||||||| |||||||||||||||| ||| | |||||||    
T  29867927 ctaatttcttgtaacccatttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctctcccccaaattaggtca 29868013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 36773611 - 36773692
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  36773611 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctctcc 36773692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7815392 - 7815311
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| |||||||||||||||  | ||| |||||||||||| ||||||||| ||||||||||| |||||| |||||||||    
T  7815392 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaa-gaactcatttatagtggattggagagattaatctctcc 7815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 32289618 - 32289708
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||  | ||| ||||||||   |||||||||||||||||  |||  |||||||||||||||||||| |||||||||    
T  32289618 aatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtaaattagagagatcaatctctcctccagagtaggtca 32289708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33162569 - 33162488
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||| ||||| ||||||||||||||||||||  ||||||||||||||||    
T  33162569 ttgttgaagctaatttcttgtaacccatttgtatctctctgtaa-gaactcattgatagtggattagagagatcaatctctcc 33162488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 42362401 - 42362496
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| ||| |||||||| ||||||||||||||||||||| ||||||| |||||||| ||| | |||||||    
T  42362401 ttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatctatctctcccccagattaggtca 42362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 6266746 - 6266835
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  |||||||||||||| |||||||||    
T  6266746 aatctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtca 6266835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26353233 - 26353314
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| |||||||||||||||  | ||| |||| ||||||| | ||||||||||||||||||| |||||||| |||||||    
T  26353233 ttgttgaagctaatttcttgtaacacttttgtatctttttgtaa-gtactcattgatagtggattggagagatcactctctcc 26353314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 12647498 - 12647410
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  12647498 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 12647410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 34139847 - 34139794
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  34139847 aagaactcattgatagtggattggagagatcaatctctcccccagattaggtca 34139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 14633945 - 14633849
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| ||| ||||   |||||||||| |||||||||||| |||||||||||||||| ||| | |||||||    
T  14633945 ttgtttaagctaatttcttgtaacccatttgtatcccttttgtaagaactcatagatagtggattggagagatcaatctctcccccagattaggtca 14633849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 36205774 - 36205689
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||  | ||| |||||||||  ||||||||||||| || |||||| |||| ||||||| ||||||| |||||||||    
T  36205774 ctaatttcttgtaactcttttgtatctctttg--aagaactcattgacagcggattggagagttcaatctatcctccagagtaggtca 36205689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 42288229 - 42287993
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||| ||||||||   ||| || ||||||||| || |||||||||| ||||||| |||||||||||||||| ||| | |||||||  |    
T  42288229 ttgttgaagctaatttattgtaacccatttgtatttctttgtaa-gagctcattgataatggattggagagatcaatctctcc-ccagattaggtcaa-g 42288133  T
Q  101 ttggatcaaactaggtaaaca-tttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
    ||||| | |||| ||| || | |||||||||  |||| ||||||||  || ||||||| ||||            |||| |||||||||||| || | ||    
T  42288132 ttggaccgaactgggtcaataatttcttggtgctgttatcttttctttaccctctttaacttgtttattcctt--ggttggattgtggtttttctatgca 42288035  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
     ||  ||||||||||||||||||||||||||||||| |||||    
T  42288034 cttgttttctagattagatctagattgttgttattgcttgtg 42287993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 7597130 - 7597003
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||| ||| ||||||||||||||   | ||| |||| |||||||||||||||||||| || ||  | |||||||  |||||||| || ||||||||||||    
T  7597130 ttgtcgaaactaatttcttgtaagtcttttgtatctttttgtaaagaactcattgattgtagaacggagagatc--tctctccttcagagtaggtcattg 7597033  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    || || | ||||| ||||| |||| |||||    
T  7597032 ttagaccgaactaagtaaatatttgttggt 7597003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 39284930 - 39284980
Alignment:
Q  47 aactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  39284930 aactcattgatagtggattggagagatcaatctctcccccagattaggtca 39284980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 16676449 - 16676498
Alignment:
Q  175 ggttcgattgtggttttgctttacatttcgtttctagattagatctagat 224  Q
    |||||||||||||||||| |||||| || ||| |||||||||||||||||    
T  16676449 ggttcgattgtggttttgatttacactttgttgctagattagatctagat 16676498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 7451432 - 7451476
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaaattt 298  Q
    ||||| | |||||||||||||||||||||||||||||||| ||||    
T  7451432 attgaaacttgctccacgaatctaaatttcattgatgtgagattt 7451476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 11151710 - 11151615
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| ||| |||||||| |||||| | |||||||||||| ||||||||| |||||| ||| | |||||||    
T  11151710 ttgtttaagctaatttcttgtaacccatttgtatcactttgtaa-gaactcttagatagtggattggagagatcaacctctcccccagattaggtca 11151615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11690550 - 11690637
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccata 89  Q
    ||||| || ||||||||||||||||   ||| ||| |||||||| ||| || |||||||||||||| ||||||||| |||||| |||||    
T  11690550 ttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaaatcgttgatagtggattggagagatcaacctctcccccata 11690637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 13656143 - 13656056
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  13656143 ctaatttcttgtaacc-tcttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 13656056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 14202489 - 14202450
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  14202489 aagaactcattgatagtagattggagagatcaatctctcc 14202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 18480614 - 18480529
Alignment:
Q  36 tctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccata-gtaggtcattgttggatcaaactaggtaaaca 121  Q
    ||||||||||| ||||||||||| |||||||||||||| | | ||||  | ||| |||| |||||||| ||||||||||| ||||||    
T  18480614 tctttgtaaagcactcattgatactggattgaagagat-attttctctccaatatgtagatcattgtttgatcaaactagataaaca 18480529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 317
Target Start/End: Complemental strand, 40935487 - 40935421
Alignment:
Q  251 gttattgatatttgctccacgaatctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    |||||||||| || ||||||  |||||| ||| |||| ||||| |||| ||||||||||||||||||    
T  40935487 gttattgatactttctccacacatctaacttttattggtgtgacatttcgagttaccgaattcacaa 40935421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 42412117 - 42412161
Alignment:
Q  52 attgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||    
T  42412117 attgatagtggattggagagatcaatctctcc-ccagagtaggtca 42412161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4561137 - 4561197
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtg 61  Q
    |||||||| |||||||||||||||  | ||| ||||||||||||| || |||||| |||||    
T  4561137 ttgttgaagctaatttcttgtaacatttttgtatctctttgtaaaaaattcattgttagtg 4561197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 12073441 - 12073678
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  12073441 ttgttgaagctaatttattgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcttccagagtaggtcatt 12073538  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
    |||||| | |||||||| ||||||||||||| ||||| ||||||||  |||||||||||||||            |||| ||||||||||||| | | ||    
T  12073539 gttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttg--tttattctttggttagattgtggttttgttatgca 12073636  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
     || |||||||||||||||||||||||||||| ||| |||||    
T  12073637 cttggtttctagattagatctagattgttgttgttgcttgtg 12073678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 8665457 - 8665616
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  8665457 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 8665554  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| ||||||||||  |||||||||||| ||||| ||||||||  |||||||||||||||    
T  8665555 ttggaccaaactaggtgtacatttcttggtgttgttatcttttctttactctctttatcttg 8665616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 33989893 - 33990149
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||| | | ||| ||||||||||||| ||||| || ||||||||||| |||||||||||||||| ||| |||||||||||     
T  33989893 ttgttgaagctaatttcttgtaatccttttgtatctctttgtaaataactcgttaatagtggattggagagatcaatctctccaccagagtaggtcattc 33989992  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacat 200  Q
    ||||||  |||| ||||||||||||||||| || || | |||| || |||||||||||||||            ||||| ||| ||| |||||| | ||     
T  33989993 ttggattgaactgggtaaacatttcttggtgttattatattttttctactctctttatcttg--tttattctttggttcaattctggatttgctatgcac 33990090  T
Q  201 ttcgtttctagattagatctagattgttgttattgtttgtgactattttagttattgat 259  Q
    || |||||||||||||||||||||||||||| ||| |||||  |||||| |||||||||    
T  33990091 ttggtttctagattagatctagattgttgttgttgcttgtgtttattttggttattgat 33990149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 2209762 - 2210004
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||     
T  2209762 ttgttgaagctaatttcttgtaacccattttgtatctctttgtaa-gaactcattgatagtggattggagagattaatctctcctccagagtaggtcatg 2209860  T
Q  100 gttggatcaaactaggtaaac-atttcttggttttgttctc---ttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctt 195  Q
    |||||| | |||| ||| ||| || ||||||| ||||| ||   ||||||| |||||||||||||||            |||| |||||||||||||||     
T  2209861 gttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttg--tttatcatttggttagattgtggttttgcta 2209958  T
Q  196 tacatttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
    | || ||  |||||||||||||||||||||||||||||||||||||    
T  2209959 tgcacttgttttctagattagatctagattgttgttattgtttgtg 2210004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 46703549 - 46703710
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||| || |||||||||||||||| || ||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  46703549 ttgtttaagctaatttcttgtaacccattttgtatctctttgtaa-gaactcatttatagtggattggagagatcaatctctcctccagagtaggtcatt 46703647  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | || | ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  46703648 gttggaccgaattgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 46703710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 50673966 - 50673807
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||      
T  50673966 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-a 50673870  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | |||||||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  50673869 gttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 50673807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 379429 - 379589
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| ||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  379429 ttgttgaagctaatttcttgtaacccatttgtatcgctttgtaa-gaactaattgatagtggattggagagatcaatctctcctccagagtaggtcattg 379527  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| | | ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  379528 ttggaccgaactggatgaacatttcttggtgttgttatcttttctttactctctttatcttg 379589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 8648188 - 8648347
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||| |||||   ||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||||  |    
T  8648188 ttgttgaagctaatttcttataacccatttgtatctctttgtaa-gaactcattgatattggattggagagatcaatctctcctccagagtaggtca-ag 8648285  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| |||||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  8648286 ttggaccaaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 8648347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 12119591 - 12119815
Alignment:
Q  4 ttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttg 103  Q
    ||||| |||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| | | |||||||||||||||    
T  12119591 ttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctctcc-caagagtaggtcattgttg 12119689  T
Q  104 gatcaaactaggtaaac-atttcttggttttgt----tctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttac 198  Q
    || | |||||||| ||| |||||||||| ||||    | | ||||||| |||||||||||||||            ||| |||||||||||||||| | |    
T  12119690 gaccgaactaggtgaacaatttcttggtgttgtcatctattttttctctactctctttatcttg--tttagtctttggtccgattgtggttttgctatgc 12119787  T
Q  199 atttcgtttctagattagatctagattg 226  Q
    | || |||||||||||||||||||||||    
T  12119788 acttagtttctagattagatctagattg 12119815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 40632494 - 40632653
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||| ||||  |    
T  40632494 ttgttgaagctaatttcttgtaacctatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctctaaagtaagtca-ag 40632591  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||||||||||||||||| ||||| |||||| |  |||||||||||||||    
T  40632592 ttggaccgaactgggtaaacatttcttggtgttgttatcttttttttactctctttatcttg 40632653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6656005 - 6656164
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||      
T  6656005 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcatccagagtaggtca-a 6656101  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | || | ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  6656102 gttggaccgaattgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 6656164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 33089927 - 33090089
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||| || ||||||| ||| |||||| ||||||||||||||||||||||||||  |||||||||||||||||| | ||||||| ||||    
T  33089927 ttgttgaagctaatttattataaccattttgtatctctctgtaaagaactcattgatagtggattagagagatcaatctctcctctagagtaggttattg 33090026  T
Q  101 ttggatcaaactaggtaaacatttc-ttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| |  ||||| |||||| ||| |||   |||||||||||||||  ||||||||||||||    
T  33090027 ttggaccggactagataaacaattctttgaagttgttctcttttctctgctctctttatcttg 33090089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26699562 - 26699401
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||  | ||| |||||||||||||||||||||| ||| ||||||| ||||||||||||||   ||| ||||||||||||    
T  26699562 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggagagatcaatctctatcccagagtaggtcattg 26699463  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| |||||| ||||||| ||   ||| ||||||||  |||||||||||||||    
T  26699462 ttggaccgaactgggtaaaaatttcttagtgccgttatcttttctttactctctttatcttg 26699401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 41964464 - 41964699
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||| || ||||||| |||||||| || ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||      
T  41964464 ttgtttaagctaatttattgtaacccattttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-a 41964561  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
    |||||| | |||| ||| | ||||||||||| ||||| ||||||||  ||||||  |||||||            |||| ||||||||||||||| | ||    
T  41964562 gttggaccgaactgggtgagcatttcttggtgttgttatcttttctttactctc--tatcttg--tttatcctttggttagattgtggttttgctatgca 41964657  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
     ||  ||||||||||||||||||||||||||||||| |||||    
T  41964658 cttgttttctagattagatctagattgttgttattgcttgtg 41964699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 56178756 - 56178661
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  56178756 ttgttgaagctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 56178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 41639478 - 41639634
Alignment:
Q  4 ttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttg 103  Q
    ||||| ||||||||||||||||   ||| |||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||  ||||    
T  41639478 ttgaagctaatttcttgtaacccatttgtatctatttgtaa-gaactcatcgatagtggattggagagatcaatctctcctccagagtaggtca-agttg 41639575  T
Q  104 gatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    || | ||||  || ||||||||||||| ||||| || |||||  |||||||||||||||    
T  41639576 gaccgaactgagtgaacatttcttggtgttgttatcgtttctttactctctttatcttg 41639634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 4588008 - 4588135
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| ||||| |||||||||| ||||| ||||| |  |    
T  4588008 ttgttgaagctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagaacaatctctcccccataataggtga-ag 4588105  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| |||||| |||||||||||| ||||    
T  4588106 ttggaccaaactgggtaaacatttcatggt 4588135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 33 - 128
Target Start/End: Complemental strand, 35369533 - 35369440
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttg 128  Q
    ||||||||||||||||||||||||| ||| ||||||||| || ||||||||  |||||||||||||||||||| ||||| ||||||||||||||||    
T  35369533 atctctttgtaaagaactcattgatggtgaattgaagaggtcgatctctcc--catagtaggtcattgttggaccaaacaaggtaaacatttcttg 35369440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 34112866 - 34113023
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||| ||||||| | ||| ||||||||||||||||||||||||||||| | || |||||||  ||||||| | ||||||||||||||    
T  34112866 ttgttgaagctaatttcatgtaacccttttgcatctctttgtaaagaactcattgatagtgaagtggagagatc--tctctcccctatagtaggtcattg 34112963  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | || | |||||||| || ||  |  |||||||||||||| |||| ||||||||||    
T  34112964 ttggaccgaatttggtaaacaattatt--tggtgttctcttttctctactcactttatcttg 34113023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 50262820 - 50262656
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||| ||||| ||| |||||||| ||||||| ||||||||||||    
T  50262820 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagttgattggagatatcaatctttcctccagagtaggtcattg 50262722  T
Q  101 ttggatcaaactaggtaaac-atttcttggttttgttctc---ttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||| || ||||||| ||||| ||   ||||||| ||||| |||||||||    
T  50262721 ttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctttttatcttg 50262656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 35662490 - 35662649
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||| | |||||||||      
T  35662490 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatatctcctcaagagtaggtca-a 35662586  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | ||||   | ||||||| ||||| ||||| ||||||||  |||||||||||||||    
T  35662587 gttggaccgaactgaatgaacattttttggtgttgttatcttttctttactctctttatcttg 35662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 48143092 - 48143187
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||||| | ||| |||||||  ||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  48143092 ttgttgaagctaatttcttgtaacccttttgtatctcttcataa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 48143187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 21703943 - 21703829
Alignment:
Q  13 atttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaact 112  Q
    |||||||||| || | ||| |||| ||||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||||||||||| || | ||||    
T  21703943 atttcttgtaccctttttgtatctttttgtaaagaactcattgacagtggattggagatatcaatctatcc-ccatagtaggtcattgtttgaccgaact 21703845  T
Q  113 aggtaaacatttcttg 128  Q
     |||||||||||||||    
T  21703844 gggtaaacatttcttg 21703829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22882870 - 22882715
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||| | ||| ||||||| ||||||||||||||| |||||||||  ||| |||||  ||||| ||  ||||||||||||    
T  22882870 ttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaa--tctcccccggagtaggtcattg 22882773  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatctt 161  Q
    ||||| | |||| | ||||||||||||||   |||| | ||||||  ||||||||||||||    
T  22882772 ttggaccgaactggataaacatttcttgg---tgttattttttctatactctctttatctt 22882715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 22934534 - 22934379
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||| | ||| ||||||| ||||||||||||||| |||||||||  ||| |||||  ||||| ||  ||||||||||||    
T  22934534 ttgttgaagctaatttcttgtaacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaa--tctcccccggagtaggtcattg 22934437  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatctt 161  Q
    ||||| | |||| | ||||||||||||||   |||| | ||||||  ||||||||||||||    
T  22934436 ttggaccgaactggataaacatttcttgg---tgttattttttctatactctctttatctt 22934379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 54883069 - 54883229
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| || ||||||||||||||||| | || ||||  |    
T  54883069 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagggatcaatctctcctccagattaagtca-ag 54883166  T
Q  101 ttggatcaaactaggtaaac-atttcttggttttgttctc-ttttctccactctctttatctt 161  Q
    ||||| | |||| ||| ||| |||||||||| ||||| || ||||||  ||||||||||||||    
T  54883167 ttggaccgaactgggtcaacaatttcttggtgttgttatctttttctttactctctttatctt 54883229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 6542298 - 6542171
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||| | | | ||| |||||||||||| |||||| |||||||||||||| |||||||||||||||| |||  ||||||||  |    
T  6542298 ttgttgaaactaatttcttgttagccttttgtatctctttgtaa-gaactcgttgatagtggattggagagatcaatctctcccccagggtaggtca-ag 6542201  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| | |||| |||||||||||||||||    
T  6542200 ttggaccgaactgggtaaacatttcttggt 6542171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27417084 - 27416925
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| | |||||||  |    
T  27417084 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattggagagatcaatctctcccccagattaggtca-ag 27416987  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | ||||  || |||| |  ||||| ||||| |||| |||  |||||||||||||||    
T  27416986 ttggaccgaactgagtcaacaatctttggtgttgttatcttgtctttactctctttatcttg 27416925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9927577 - 9927482
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  9927577 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 9927482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26175755 - 26175660
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  26175755 ttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 26175660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 129
Target Start/End: Complemental strand, 37229808 - 37229714
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttgg 129  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||||  ||||||||||||  |||||| | |||||||||||||||||||||    
T  37229808 atctctttgtaa-gaactcatttatagtggattggagagatcaatctctccctcatagtaggtca-agttggaccgaactaggtaaacatttcttgg 37229714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 37755070 - 37754954
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaa 110  Q
    ||||||||||||||| | ||  |||||||| |||| |||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||| ||  |||    
T  37755070 taatttcttgtaacctttttttatctctttctaaaaaactcattgataatggtttgaagagatcaatctctcccccatagtaggtaattgttagactaaa 37754971  T
Q  111 ctaggtaaacatttctt 127  Q
    || | |||| |||||||    
T  37754970 ctggataaatatttctt 37754954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 5370193 - 5370107
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| |||||||||||||||||| |  |||||||||||||||||||| |||||||||    
T  5370193 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggactagagagatcaatctctcctccagagtaggtca 5370107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 12744035 - 12743949
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  12744035 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccatattaggtca 12743949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 12745424 - 12745338
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  12745424 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccatattaggtca 12745338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 26364285 - 26364445
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||| | |||||||      
T  26364285 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattaatagtggattggagagatcaatctctcccccagattaggtca-a 26364381  T
Q  100 gttggatcaaactaggtaaac-atttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||| ||   |||| ||| ||| |||||||||| ||||| ||||||||  |||||||||||||||    
T  26364382 gtttgactgaactgggtcaacaatttcttggtgttgttatcttttctttactctctttatcttg 26364445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 38811308 - 38811153
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||||||| |||||||| || ||||| ||| || ||||||||||  |||||||||||||| |  | |||||||  ||||||| | | ||||||||||||    
T  38811308 ttgttgaatttaatttctagtgaccattttgtat-tctttgtaaatgactcattgatagtgaagcggagagatc--tctctccccaagagtaggtcattg 38811212  T
Q  101 ttggatcaaactaggtaaacatttctt-ggttttgttctcttttctccactctctttat 158  Q
    ||||| | |||| |||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  38811211 ttggaccgaactgggtaaacaattcttcggtgttgttctcttttctctactctctttat 38811153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 34570533 - 34570452
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  34570533 ttgttgaagctaatttcttgtaacccaattgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 34570452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 37740674 - 37740755
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  37740674 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 37740755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36994573 - 36994660
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccata 89  Q
    |||||||| ||||||||||||||||   ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||    
T  36994573 ttgttgaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccata 36994660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 29999917 - 29999830
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||  | ||| |||| |||   ||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  29999917 ctaatttcttgtaactcttttgtatcttttttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 29999830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5429728 - 5429809
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  5429728 ttgttgaagctaatttcttgtaacccatttgtatctatttgtaa-gaactcattgatagtggattggagagatcaatctctcc 5429809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 13992405 - 13992317
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||  | ||| ||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  13992405 aatctaatttcttgtaactcttttgtatctctt-gtaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 13992317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 31474200 - 31474327
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||| ||||| |||||| ||||||||| ||| ||||| |||      
T  31474200 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagttgattggagagataaatctctccaccagagtagatca-a 31474296  T
Q  100 gttggatcaaactaggtaaacatttcttggt 130  Q
    |||||| | |||| ||||||||| |||||||    
T  31474297 gttggaccgaactgggtaaacatatcttggt 31474327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 48893757 - 48893662
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| |||||||||||||||| ||| | |||||||    
T  48893757 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctctcccccagattaggtca 48893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 36463508 - 36463413
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| |||| ||||||||| |||||||||||||||| ||| | |||||||    
T  36463508 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactctttgacagtggattggagagatcaatctctcccccagattaggtca 36463413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 47038529 - 47038435
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||| ||| ||| |||| ||||||| || |||||||||||||||||| |||||||||||||||| ||| |||| ||||    
T  47038529 ttgttgaagctaatttcttgtaatcat-ttgtatctgtttgtaagga-ctcattgatagtggattggagagatcaatctctcccccagagtaagtca 47038435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 52095472 - 52095389
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtagg 94  Q
    ||||||||||||||||   ||| |||||||||||| ||| || |||||||||||||| |||||||||||||||||||| ||||||    
T  52095472 ctaatttcttgtaacccatttgtatctctttgtaa-gaaatctttgatagtggattggagagatcaatctctcctccagagtagg 52095389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 12744157 - 12744087
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctct 81  Q
    ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  12744157 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctct 12744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 12745546 - 12745476
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctct 81  Q
    ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  12745546 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctct 12745476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 31495431 - 31495340
Alignment:
Q  7 aatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||||| | | ||| ||||||||   ||||||||||||||||| ||||| |||| ||||||||||||||| |||||||||    
T  31495431 aatctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagttgattggagagttcaatctctcctccagagtaggtca 31495340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3913497 - 3913578
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| |||||||||| |||||   ||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  3913497 ttgttgaagctaatttcttttaacccatttgtatatctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 3913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 46147510 - 46147415
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| ||| |||||||||||| ||| | |||||||    
T  46147510 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactctttgatagtggattggagacatcaatctctcccccaaattaggtca 46147415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 7122767 - 7122827
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||    
T  7122767 tttgtaaagaactcatttgatagtggattggagagtacaatctctcctccatagtaggtca 7122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 54200025 - 54199930
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||||||||||||| |||  |||||||| ||||||| ||| | |||||||    
T  54200025 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtgaattagagagatcattctctcccccagattaggtca 54199930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6677518 - 6677597
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctc 80  Q
    |||||||| |||||||||||||||| | ||| || ||||||||||||| || |||||| ||||||  |||||||||||||    
T  6677518 ttgttgaagctaatttcttgtaacccttttgtatatctttgtaaagaagtctttgataatggatttgagagatcaatctc 6677597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 12739660 - 12739574
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||   ||| |||| ||||||  ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  12739660 ctaatttcttgtaacccatttgtatctatttgtat-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 12739574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 35370142 - 35370072
Alignment:
Q  35 ctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggat 106  Q
    ||||||||||||||||||||||| ||| ||||||||| |  |||||||| |||| |||||||||||||||||    
T  35370142 ctctttgtaaagaactcattgatggtgaattgaagaggtagatctctcc-ccatggtaggtcattgttggat 35370072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 44967937 - 44967823
Alignment:
Q  12 aatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaac 111  Q
    |||||||||||||||| ||| ||||||||||||| ||||| |||| ||| ||||  || ||||||||||||| ||| | || |||| ||||||| | | |    
T  44967937 aatttcttgtaaccat-ttgtatctctttgtaaaaaactcgttgagagtagattagagggatcaatctctcccccagaataagtcactgttggaccgacc 44967839  T
Q  112 taggtaaacatttctt 127  Q
    | ||||||||||||||    
T  44967838 tgggtaaacatttctt 44967823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 44570485 - 44570427
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatag 59  Q
    |||||||| |||||||||||||||  | ||| |||||||||||||||||||||||||||    
T  44570485 ttgttgaaactaatttcttgtaacatttttgtatctctttgtaaagaactcattgatag 44570427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 6719781 - 6719858
Alignment:
Q  181 attgtggttttgctttacatttcgtttctagattagatctagat-tgttgttattgtttgtgactattttagttattg 257  Q
    |||||||||||||||| || || ||||||||||||||||||||| ||||||| |||  ||||||| |||| |||||||    
T  6719781 attgtggttttgctttgcacttggtttctagattagatctagatctgttgtttttgcctgtgactgttttggttattg 6719858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 12747866 - 12747794
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||||||||||   ||| |||| ||||||  ||||||||||||||||||||| ||||||||||||||||    
T  12747866 ctaatttcttgtaacccatttgtatctatttgtat-gaactcattgatagtggattggagagatcaatctctcc 12747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 13009521 - 13009468
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| | |||||||    
T  13009521 aagaactcattgatagtggattggagagatcgatctctcctccaaattaggtca 13009468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 45687259 - 45687214
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccata 89  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  45687259 aagaactcattgatagtggattggagagatctatctctcctccata 45687214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 55085390 - 55085325
Alignment:
Q  175 ggttcgattgtggttttgctttacatttcgtttctagattagatctagattgttgttattgtttgt 240  Q
    |||| ||||||||||||||| | || || ||||||| |||||||||||||||||||||||| ||||    
T  55085390 ggttggattgtggttttgctatgcacttggtttctaaattagatctagattgttgttattgcttgt 55085325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 7124986 - 7125046
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  7124986 tttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 7125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 35662750 - 35662814
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaaatttagagtt-accgaattcacaa 317  Q
    ||||||| ||||||||| ||||||||||||||||||||||| ||| || || |||||||||||||    
T  35662750 attgatacttgctccacaaatctaaatttcattgatgtgaagtttggaattgaccgaattcacaa 35662814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 54881613 - 54881677
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaaatttagagtt-accgaattcacaa 317  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||| || || |||||||||||||    
T  54881613 attgatacttgctccacgaatataaatttcattgatgtgaagtttggaattgaccgaattcacaa 54881677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24969161 - 24969238
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatct 79  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||| ||||||||||||||| |||||| |||||    
T  24969161 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactaattgatagtggattggagagataaatct 24969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 33090178 - 33090241
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    ||||||| || | |||| |||| ||||||||||||||||| |||| ||||||||||||||||||    
T  33090178 attgatacttcccccacaaatcaaaatttcattgatgtgagatttggagttaccgaattcacaa 33090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 41964727 - 41964766
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  41964727 attgatacttgctccacgaatctaaatttcattgatgtga 41964766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 53345266 - 53345340
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatca 75  Q
    |||||||| |||||||||||||||| | ||  |||| ||||||||||||||||| ||| ||||||| || |||||    
T  53345266 ttgttgaaactaatttcttgtaacccttttatatctttttgtaaagaactcattaatattggattgtagggatca 53345340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 379696 - 379733
Alignment:
Q  256 tgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  379696 tgatacttgctccacgaatctaaatttcattgatgtga 379733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 3786296 - 3786341
Alignment:
Q  272 aatctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    |||||||||||||||||||||| || | ||||||||||||||||||    
T  3786296 aatctaaatttcattgatgtgagatatggagttaccgaattcacaa 3786341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 5207919 - 5207866
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||| | |||||||||||||  ||| |||||||||    
T  5207919 aagaactcattgatagtggattggaaagatcaatctctctcccagagtaggtca 5207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 291
Target Start/End: Original strand, 26364550 - 26364587
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgt 291  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  26364550 attgatacttgctccacgaatctaaatttcattgatgt 26364587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29254543 - 29254623
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctc 82  Q
    ||||||||  |||||||||| ||||   |||  ||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  29254543 ttgttgaagttaatttcttgcaacccatttgtgtctctttgtaa-gaactcgttgatagtggattggagagatcaatctctc 29254623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 319
Target Start/End: Original strand, 32091749 - 32091814
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaaatttagagttaccgaattcacaaga 319  Q
    ||||||| || || ||| ||||||||||||| | ||||||| ||||||||||||||||||| ||||    
T  32091749 attgatacttacttcacaaatctaaatttcaattatgtgaattttagagttaccgaattcataaga 32091814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 3786095 - 3786171
Alignment:
Q  87 atagtaggtcattgttggatcaaactaggtaaacatttctt-ggttttgttctcttttctccactctctttatcttg 162  Q
    ||||||||||||||||| | ||||||  || |||| || || ||| ||||||||||||||| |||||||||||||||    
T  3786095 atagtaggtcattgttgtaccaaactgagttaacaattatttggtgttgttctcttttctctactctctttatcttg 3786171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 5136149 - 5136209
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  5136149 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 5136209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 5138374 - 5138434
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  5138374 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 5138434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 8393451 - 8393538
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  8393451 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 8393538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 8395660 - 8395747
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  8395660 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 8395747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32091527 - 32091583
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgat 57  Q
    |||||||| |||||||||||||||  | ||| ||||||||||||||||| |||||||    
T  32091527 ttgttgaaactaatttcttgtaactcttttgtatctctttgtaaagaacacattgat 32091583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 41961475 - 41961523
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgata 58  Q
    |||||||||||||| ||| ||| |||||||||||||||| |||||||||    
T  41961475 ctaatttcttgtaatcattttgtatctctttgtaaagaagtcattgata 41961523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 55085301 - 55085261
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaa 294  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  55085301 attgatacttgctccatgaatctaaatttcattgatgtgaa 55085261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 51337123 - 51337240
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaa 110  Q
    |||||| || ||||| | ||| |||||||| ||| |||||||||||||||| |||  ||||||||||||||||  || | |||||||  |||||| | ||    
T  51337123 taatttattataacccttttgtatctctttttaa-gaactcattgatagtgtattagagagatcaatctctcccacacattaggtca-agttggaccgaa 51337220  T
Q  111 ctaggtaaacatttcttggt 130  Q
    || |||||||||||| ||||    
T  51337221 ctgggtaaacatttcgtggt 51337240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 52467473 - 52467392
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||| ||||||||||   ||| ||| ||||||||  ||||  |||||||||||||| ||||||||||||||||    
T  52467473 ttgttgaagctaatatcttgtaacccatttgtatcactttgtaat-aactttttgatagtggattggagagatcaatctctcc 52467392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 5871911 - 5871964
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||  |||||||||||||||| ||| | |||||||    
T  5871911 aagaactctttgatagtggattagagagatcaatctctcccccagattaggtca 5871964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48142497 - 48142440
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgata 58  Q
    |||||||| ||| |||||||||||| |  |  ||||||||||||||||||||||||||    
T  48142497 ttgttgaagctagtttcttgtaacccttgtatatctctttgtaaagaactcattgata 48142440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 8648460 - 8648500
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaa 294  Q
    ||||||| |||||| |||||||||||||||||||| |||||    
T  8648460 attgatacttgctcgacgaatctaaatttcattgaagtgaa 8648500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 8665721 - 8665761
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaa 294  Q
    ||||||| |||||| |||||||||||||||||||| |||||    
T  8665721 attgatacttgctcgacgaatctaaatttcattgaagtgaa 8665761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 34113117 - 34113161
Alignment:
Q  273 atctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    ||||||||||||||||| ||| | ||||||||||| |||||||||    
T  34113117 atctaaatttcattgatatgagaattagagttaccaaattcacaa 34113161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 6e-44; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 5043676 - 5043836
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  5043676 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtagattggagagatcaatctctcctccatagtaggtcatt 5043773  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | |||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  5043774 gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 5043836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 26800636 - 26800873
Alignment:
Q  1 ttgttgaatctaatttcttgtaacca-tgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| | | ||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  26800636 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 26800733  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
    |||||| | |||| | | ||||||||||||| ||||| ||||||||| ||||| |||||||||            |||| ||||||||||||||| | ||    
T  26800734 gttggaccgaactggatgaacatttcttggtgttgttatcttttctctactctttttatcttg--tttatcttttggttagattgtggttttgctatgca 26800831  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
     ||  |||||||| |||||||||||||||||||||| |||||    
T  26800832 cttgttttctagactagatctagattgttgttattgcttgtg 26800873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 21588980 - 21589139
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  21588980 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 21589077  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||  ||| || ||||||||    
T  21589078 ttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactttccttatcttg 21589139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 3808828 - 3808592
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||     
T  3808828 ttgttgaaactaatttcttgtaacccattttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcatg 3808730  T
Q  100 gttggatcaaactaggtaaac-atttcttggttttgttctc---ttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctt 195  Q
     ||||| | |||||||| ||| || ||||||  ||||| ||   ||||||| |||||||||||||||            |||| |||| ||||||||||     
T  3808729 attggaccgaactaggtgaacaatctcttggggttgttgtctatttttctctactctctttatcttg--tttatcctttggttagattatggttttgcta 3808632  T
Q  196 tacatttcgtttctagattagatctagattgttgttattg 235  Q
    | |||||  ||||||||||||||||||||||||| |||||    
T  3808631 tgcatttgttttctagattagatctagattgttgctattg 3808592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 21593713 - 21593855
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  21593713 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 21593810  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttct 145  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||    
T  21593811 ttggaccgaactgggtgaacatttcttggtgttgttatcttttct 21593855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22424946 - 22424785
Alignment:
Q  1 ttgttgaatctaatttcttgtaacca--tgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcat 98  Q
    ||||| || ||||||||||||||||   | ||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || ||||||||||    
T  22424946 ttgtttaagctaatttcttgtaacccatttttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctccttcagagtaggtcat 22424849  T
Q  99 tgttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||||| |  ||| ||| ||||||||||||| ||||| ||||||||| |||||||||||||||    
T  22424848 tgttggaccgtactgggtgaacatttcttggtgttgttatcttttctctactctctttatcttg 22424785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 17763039 - 17763284
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||| ||||  ||||||||||||||||||||||| || ||||||||||||||||| ||||| |||      
T  17763039 ttgttgaagctaatttcttgtaactcat-ttgtatctttttg-gaagaactcattgatagtggattggagtgatcaatctctcctccagagtagatcaag 17763136  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttc-tccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttac 198  Q
     ||||| | |||||||| ||||||||||||| ||||| ||||||| |  |||||||||||||||            |||| |||||| |||||||| | |    
T  17763137 tttggaccgaactaggtgaacatttcttggtgttgttatcttttcttttactctctttatcttg--ttcatcctttggttagattgtagttttgctatgc 17763234  T
Q  199 atttcgtttctagattagatctagattgttgttattgtttgtgactattt 248  Q
    | ||  | |||||||||||||||||||||||||||||||||||| |||||    
T  17763235 acttgttatctagattagatctagattgttgttattgtttgtgattattt 17763284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 17758072 - 17758304
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||| |||| | ||||| |||       
T  17758072 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctcccctctagagtagttcaagt 17758170  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttc-tccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
    ||||| | |||||||| ||||||||||||| ||||| ||||| | |  || ||||||||||||            |||| ||||||||||||||| | ||    
T  17758171 ttggaccgaactaggtgaacatttcttggtgttgttatctttccttttacgctctttatcttg--tttatcctttggttagattgtggttttgctatgca 17758268  T
Q  200 tttcgtttctagattagatctagattgttgttattg 235  Q
     ||  |||||||||||||||||||||||||||||||    
T  17758269 cttgttttctagattagatctagattgttgttattg 17758304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 2973058 - 2972925
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||||  |    
T  2973058 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctcaagagtaggtca-ag 2972961  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgtt 136  Q
    || || | |||||||| ||||||||||||| |||||    
T  2972960 ttcgaccgaactaggtgaacatttcttggtgttgtt 2972925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 26830242 - 26830091
Alignment:
Q  1 ttgttgaatctaatttcttgtaa-ccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| |||||||||||||| |||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||      
T  26830242 ttgttgaagctaatttcttgtaatccat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccaaagtaggtca-a 26830146  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctct 154  Q
    ||| ||   |||| ||| ||||||||||||| ||||| ||||||||  |||||||    
T  26830145 gtttgactgaactgggtgaacatttcttggtgttgttatcttttctttactctct 26830091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 25073617 - 25073784
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||| || ||| ||| |||||||| | ||| |||||| ||||||||||||||||||||||||||  ||| ||||||||||| | || | ||||| ||||    
T  25073617 ttgttaaagctattttattgtaacccttttgtatctctatgtaaagaactcattgatagtggattagagaaatcaatctctcattcaaattaggttattg 25073716  T
Q  101 ttggatcaaactaggtaaacatttcttggt------tttgttctcttttctccactctctttatcttg 162  Q
    || ||  |||||||||||||||||||||||      ||||||||||||||||  ||||||||||||||    
T  25073717 ttagactaaactaggtaaacatttcttggtgtgttgtttgttctcttttctctgctctctttatcttg 25073784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 5406310 - 5406224
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  5406310 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 5406224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 5410635 - 5410549
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  5410635 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 5410549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 5413504 - 5413418
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  5413504 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 5413418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 94
Target Start/End: Complemental strand, 31404785 - 31404702
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtagg 94  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31404785 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtagg 31404702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9183150 - 9183065
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctcca 87  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  9183150 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctcca 9183065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 2171641 - 2171556
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  2171641 ctaatttcttgtaaccct-ttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 2171556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 30834646 - 30834560
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||||||||| || ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  30834646 ctaatttcttgtaacccttttgtatctctttggaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 30834560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4045472 - 4045566
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggt 95  Q
    |||||||| |||||||||||||| ||| ||  ||||||||||||| |||||||||||||||||||| |||||||||| ||| | ||| |||||||    
T  4045472 ttgttgaagctaatttcttgtaatcattttatatctctttgtaaataactcattgatagtggattggagagatcaatttctaccccaaagtaggt 4045566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26954405 - 26954310
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||| ||| | | |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  26954405 ttgttgaagctaatttcttgtaactcatct-gtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccaaagtaggtca 26954310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 5409156 - 5409093
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  5409156 atctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 5409093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28137527 - 28137432
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| || ||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  28137527 ttgtttaagctaatttcttgtaacccatttgtatttctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagagtaggtca 28137432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 33160462 - 33160381
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagta 92  Q
    |||||||||||||||  | ||| |||||||||||| |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  33160462 ctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatggtggattggagagatcaatctctcctccagagta 33160381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 412155 - 412246
Alignment:
Q  7 aatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||||| | | ||| ||||||||   ||||||||||||||||||||||  |||| ||||||||||||||| |||||||||    
T  412155 aatctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtca 412246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 3072874 - 3072783
Alignment:
Q  7 aatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||||| | | ||| ||||||||   |||||||||||||||||| |||| |||| ||||||||||||||| |||||||||    
T  3072874 aatctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtca 3072783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 16452439 - 16452353
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | |   ||||||||| || ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  16452439 ctaatttcttgtaaccctttcatatctctttggaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 16452353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 603207 - 603126
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| |||||||||||||| ||| ||||||||||||    
T  603207 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattggagaaatcaatctctcc 603126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 6097528 - 6097475
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  6097528 aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 6097475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 16569113 - 16569166
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||| |||||||||||||||||||| | |||||||    
T  16569113 aagaactcattgatagtggattggagagatcaatctctcctccagattaggtca 16569166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 2908545 - 2908586
Alignment:
Q  39 ttgtaaagaactcattgatagtggattgaagagatcaatctc 80  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  2908545 ttgtaaagaactcattgatagtggattgaagaaatcaatctc 2908586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 3039019 - 3038927
Alignment:
Q  4 ttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| ||||||||||||||||   ||| |||||||||||| |||||| || ||||||||||| |||||| ||||||||| ||| | |||||||    
T  3039019 ttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactctttaatagtggattggagagattaatctctcccccagattaggtca 3038927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 25421362 - 25421450
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  25421362 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 25421450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 9572673 - 9572785
Alignment:
Q  35 ctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggt-aaacatttcttggtttt 133  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||| ||  | ||||||||||  ||| | | |||| ||| ||| |||||||| | ||    
T  9572673 ctctttgttaagaacccattgatagtggattgcagagatcaatctctactttagagtaggtcatcattgaaacgaactgggtaaaatatttcttgatgtt 9572772  T
Q  134 gttctcttttctc 146  Q
    ||| |||||||||    
T  9572773 gttatcttttctc 9572785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 33211272 - 33211209
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||| ||||||||| ||| ||||||| |||||||||||||||| ||| |||||||||    
T  33211272 atctctttgtaa-gaactcatttataatggattggagagatcaatctctcccccagagtaggtca 33211209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 26800901 - 26800940
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  26800901 attgatacttgctccacgaatctaaatttcattgatgtga 26800940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 4386859 - 4386904
Alignment:
Q  272 aatctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||    
T  4386859 aatctaaatttcattgatgtgagatttggagttaccaaattcacaa 4386904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 6027303 - 6027391
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||| ||||    
T  6027303 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtatgtca 6027391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 11660831 - 11660911
Alignment:
Q  183 tgtggttttgctttacatttcgtttctagattagatctagat-tgttgttattgtttgtgactattttagttattgatatt 262  Q
    ||||||||||||||||| || ||| ||||||||||||||||| ||||||| ||| ||| || | ||||  |||||||||||    
T  11660831 tgtggttttgctttacacttggttgctagattagatctagatctgttgttgttgcttgcgaatgttttgattattgatatt 11660911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 13153999 - 13154059
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  13153999 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 13154059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 33342189 - 33342129
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  33342189 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 33342129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 34164942 - 34165002
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  34164942 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 34165002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 5739935 - 5739860
Alignment:
Q  182 ttgtggttttgctttacatttcgtttctagattagatctagat-tgttgttattgtttgtgactattttagttatt 256  Q
    |||||||||||||||||| || ||| ||||||||||| ||||| ||||||| ||| || ||| |||||| ||||||    
T  5739935 ttgtggttttgctttacacttggttgctagattagatttagatatgttgttgttgattatgattattttggttatt 5739860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 22424743 - 22424706
Alignment:
Q  204 gtttctagattagatctagattgttgttattgtttgtg 241  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  22424743 gtttctatattagatctagattgttgttgttgtttgtg 22424706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 16554926 - 16555013
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  16554926 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtca 16555013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 16578629 - 16578542
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  16578629 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtca 16578542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 16616751 - 16616838
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  16616751 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtca 16616838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 16631482 - 16631569
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  16631482 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtca 16631569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 16653169 - 16653256
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  16653169 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtca 16653256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 34167164 - 34167224
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||| ||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  34167164 tttgtaaagaacttatttgatagtggattggagagtacaaactctcctccagagtaggtca 34167224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 18122 - 17885
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||||  ||||||||||||||||||| ||||||||||||||||||||  ||||||||      
T  18122 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaaa--actcattgatagtggattggagagatcaatctctcctccagggtaggtcaag 18026  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
     ||||||| |||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||            |||| ||||||||||||||| | ||    
T  18025 tttggatcgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg-tttattcctttggttagattgtggttttgctatgca 17927  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
    |||  ||||||||||||||||||||||||||||||| |||||    
T  17926 tttgttttctagattagatctagattgttgttattgcttgtg 17885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22079365 - 22079491
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||| || |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| ||||||||||||    
T  22079365 ttgttaaagctaatttcttgtaaccattttgtatctctttgtaaagaactcattgatattggattggagagatcaatttctcctccaaagtaggtcattg 22079464  T
Q  101 ttggatcaaactaggtaaacatttctt 127  Q
     |||| |||||| ||||||||||||||    
T  22079465 ctggaccaaacttggtaaacatttctt 22079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 47115220 - 47115465
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||| || |||||||||||||||| || ||| ||||||||||||| ||| |||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  47115220 ttgtttaagctaatttcttgtaacccattttgtatctctttgtaaa-aacccattgatagtggattggagagatcaatctctgctccagagtaggtcatt 47115318  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttaca 199  Q
    |||||| | |||| ||| ||||||||||| | ||||| |||||||||  |||| |||||||||             ||| ||||||||||||| | | ||    
T  47115319 gttggaccgaactgggtgaacatttcttgatgttgttatcttttctctgctctttttatcttgtttatcctttt--gttagattgtggttttgttatgca 47115416  T
Q  200 tttcgtttctagattagatctagattgttgttattgtttgtgactattt 248  Q
     ||  ||||||||||||||||||||||||||||||| |||||| |||||    
T  47115417 cttgttttctagattagatctagattgttgttattgcttgtgattattt 47115465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 47255459 - 47255325
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  47255459 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtcattg 47255361  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgtt 136  Q
    ||||| | |||| ||| ||||||||||||| |||||    
T  47255360 ttggaccgaactgggtgaacatttcttggtgttgtt 47255325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 37168346 - 37168506
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||| || |||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||      
T  37168346 ttgtttaagctaatttcttgtaacccattttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-a 37168443  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | |||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  37168444 gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 37168506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 13547208 - 13547049
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||| ||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  13547208 ttgttgaagctattttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 13547111  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  13547110 ttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 13547049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 28242386 - 28242513
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggttt 132  Q
    |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | |||| ||| ||||||||||||| |    
T  28242386 atctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggtgt 28242483  T
Q  133 tgttctcttttctccactctctttatcttg 162  Q
    |||| ||||||||| |||||||||||||||    
T  28242484 tgttatcttttctctactctctttatcttg 28242513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 13549119 - 13548960
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||| || |||||||| |||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  13549119 ttgttaaacctaatttcatgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 13549022  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  13549021 ttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 13548960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 31925826 - 31925667
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||||  |    
T  31925826 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctctagagtaggtca-ag 31925729  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||||||| ||||||||||||| ||||| | ||||||  |||||| ||||||||    
T  31925728 ttggaccgaactaggtgaacatttcttggtgttgttattttttctttactctcgttatcttg 31925667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 6808501 - 6808730
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||| ||||||||||  | ||| |||||||||||||||||||||| ||||||||||| |||||||||||||| |  || ||||||| ||||    
T  6808501 ttgttgaagctaacttcttgtaactcttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctcttcctcagagtaggttattg 6808600  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacat 200  Q
    ||||  | |||||| |||| |||||||||  ||||||| | || || |||||||||||||||             ||| ||| ||| ||||||||||||     
T  6808601 ttggtccgaactagataaatatttcttggagttgttctttgttttctactctctttatcttgtttatgcttta--gtttgatagtgattttgctttacac 6808698  T
Q  201 ttcgtttctagattagatctagattgttgtta 232  Q
    || |||||||||| ||||||||||||||||||    
T  6808699 ttggtttctagatcagatctagattgttgtta 6808730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 7482350 - 7482190
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||| || |||||||||||||||| || ||| |||||||||||| |||||||||||||||| |||| ||||||||||||||||| || |||||||||      
T  7482350 ttgtttaagctaatttcttgtaacccattttgtatctctttgtaa-gaactcattgatagtgaattggagagatcaatctctccttcagagtaggtca-a 7482253  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | |||||||| |||||||| |||| ||||  ||||||||  |||||||||||||||    
T  7482252 gttggaccgaactaggtgaacatttcatggtattgtcatcttttctttactctctttatcttg 7482190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 42298094 - 42297991
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  42298094 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattgaagagatcaatctctcctccagagtaggtcatg 42297997  T
Q  100 gttgga 105  Q
    ||||||    
T  42297996 gttgga 42297991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 2926567 - 2926719
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaa 110  Q
    |||||| |||||||| | ||| ||||||||| || ||| |||||| |||||||||| |||||||||||||| || || ||||||||||||||| | | ||    
T  2926567 taatttattgtaacctttttgcatctctttgaaacgaattcattggtagtggattggagagatcaatctcttctgcagagtaggtcattgttgcaccgaa 2926666  T
Q  111 ctaggtaaacatttc-ttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||||||||| ||| ||||| ||||||| ||| ||| |||||||||||||||    
T  2926667 ctaggtaaacaattctttggtgttgttctttttactctactctctttatcttg 2926719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37033192 - 37032951
Alignment:
Q  1 ttgttgaatctaatttcttgtaa-ccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| |||||||||||||| |||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||||||     
T  37033192 ttgttgaagctaatttcttgtaatccattttgcatctctttgtaa-gaactcattgatagtggattggagagattaatctcttctccatagtaggtcatg 37033094  T
Q  100 gttggatcaaactaggtaaac-atttcttggttttgt--tctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgcttt 196  Q
    |||||| | |||| ||| ||| || | || || ||||  ||| ||||||| |||||||||||||||            |||| || |||| ||||||| |    
T  37033093 gttggaccgaactgggtgaacaatctattcgtgttgttgtctattttctctactctctttatcttg--tttatcctttggttagagtgtgattttgctat 37032996  T
Q  197 acatttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
     || ||  ||||||||||||||||||||||||||||||| |||||    
T  37032995 gcacttgttttctagattagatctagattgttgttattgcttgtg 37032951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 11348747 - 11348898
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||| ||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  11348747 ttgttgaagctaatttcttgtaacccatttgtatctctttctaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 11348844  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctct 154  Q
    ||||| | ||||  || ||||||||||| | ||||| ||||||||  |||||||    
T  11348845 ttggaccgaactgagtgaacatttcttgatgttgttatcttttctttactctct 11348898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29136296 - 29136456
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||| ||||   ||| || ||||||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||||       
T  29136296 ttgttgaagctaatttcttggaacccatttgtatttctttgtaa-gaactcattgatcgtggattggagagatcaatctctcctccagagtaggtcaagt 29136394  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||||||| |||||||||||||  |||    ||||||| |||||||||||||||    
T  29136395 ttggaccgaactaggtgaacatttcttggtgctgtctatttttctctactctctttatcttg 29136456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 5459956 - 5460081
Alignment:
Q  2 tgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgt 101  Q
    ||||||| ||||||||||||||| || ||  || ||||||||||||||||||||||||| ||||| ||||||||||||||| || | ||||| |||||||    
T  5459956 tgttgaagctaatttcttgtaac-attttatatttctttgtaaagaactcattgatagtagattggagagatcaatctctcatctagagtagatcattgt 5460054  T
Q  102 tggatcaaactaggtaaacatttcttg 128  Q
    |||    ||||||||||||||||||||    
T  5460055 tgggctgaactaggtaaacatttcttg 5460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 15820356 - 15820483
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||| ||| |||||||||||||||| ||||||||||| |||||||| |||| |||||||||      
T  15820356 ttgttgaagctaatttcttgtaacacat-ttgtatctctttttaa-gaactcattgatagtgcattgaagagataaatctctcatccagagtaggtca-a 15820452  T
Q  100 gttggatcaaactaggtaaacatttcttggt 130  Q
    |||||||| |||||||||||||||| |||||    
T  15820453 gttggatcgaactaggtaaacatttattggt 15820483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3156914 - 3157009
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  3156914 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccatattaggtca 3157009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28223540 - 28223445
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  28223540 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccatattaggtca 28223445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 23555384 - 23555258
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| |||||||||| |||| ||| ||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||||      
T  23555384 ttgttgaaactaatttcttataactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctctcc-ccatagtaggtca-a 23555289  T
Q  100 gttggatcaaactaggtaaacatttcttggt 130  Q
    |||||||| ||||  ||||||||||||||||    
T  23555288 gttggatcgaactgagtaaacatttcttggt 23555258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 2263094 - 2262965
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||||||  ||||||||||||||| | ||  |||| ||||||||||||| |||||||||||||||||||||||||||| |||   |  |||||||||||    
T  2263094 ttgttgaagataatttcttgtaacccttttatatctttttgtaaagaacttattgatagtggattgaagagatcaatctttcccttagggtaggtcattg 2262995  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||  | ||||  ||||||||||||||||    
T  2262994 ttggtccgaactgagtaaacatttcttggt 2262965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 9109539 - 9109283
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||||||  ||||||||||||||| | ||| ||||||||||||||||| | ||||||||| |||| |||||||||||||| |   | |||| ||||| |    
T  9109539 ttgttgaagttaatttcttgtaacccttttgtatctctttgtaaagaacacgttgatagtgtattggagagatcaatctcttccatagagtaagtcatcg 9109440  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacat 200  Q
    ||| | |||||||||||||||||| ||||   |||| | |  |||| ||||||||||||||             |||| |||||||||| ||||| |||     
T  9109439 ttgaaccaaactaggtaaacattttttggggctgttatttagtctctactctctttatctt-tgtttattctttggtttgattgtggttatgcttcacag 9109341  T
Q  201 ttcgtttctagattagatctagat-tgttgttattgtttgtgactattttagttattg 257  Q
    || ||| |||| |||||||||||| ||||||||||  |||||  ||||||||||||||    
T  9109340 ttggttgctagcttagatctagatctgttgttattacttgtggttattttagttattg 9109283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 16455670 - 16455797
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||| ||||| ||||||||||||||||||||| |||||||||||||||  ||||||| |||||       
T  16455670 ttgttgaagctaatttcttgtaacccatttgtatctctgtgtaa-gaactcattgatagtggattggagagatcaatctctctcccatagtcggtca-aa 16455767  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| ||||||  ||||||||||||||||    
T  16455768 ttggaccaaactgtgtaaacatttcttggt 16455797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34603625 - 34603721
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || |||||||||||||||| || ||  |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  34603625 ttgtttaagctaatttcttgtaacccattttttatctctttgtaa-gaactcattgatggtggattgaagagatcaatctctcctccagagtaggtca 34603721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 33 - 162
Target Start/End: Complemental strand, 37876853 - 37876726
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggttt 132  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||||  |||  |||| | | |||| ||| ||||||||||||| |    
T  37876853 atctctttgtaat-aactcattgatagtggattgcagagatcaatctctcctccagagtacatca-agttgaaccgaactgggtgaacatttcttggtgt 37876756  T
Q  133 tgttctcttttctccactctctttatcttg 162  Q
    |||| ||||||||  |||||||||||||||    
T  37876755 tgttatcttttctttactctctttatcttg 37876726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 41360963 - 41361059
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcat 98  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  41360963 ttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtggattaaagagatcaatatctcccccatagtaggtcat 41361059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28220345 - 28220250
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  28220345 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 28220250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 49918399 - 49918494
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  49918399 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccaaattaggtca 49918494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 12318642 - 12318482
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||||| ||| || ||||  | ||||||||||||||| || |    |||||||  ||||||| ||||||||| |||||     
T  12318642 ttgttgaagctaatttcttgtaaccattttgtatgtcttctttaagaactcattgatactgaagcagagagatc--tctctcccccatagtagttcatta 12318545  T
Q  101 ttggatcaaactaggtaaac-atttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||||||||||| |||| ||||| ||||||||||||||  |||| ||||||||||    
T  12318544 ttggaccgaactaggtaaacaattttttggtgttgttctcttttctttactccctttatcttg 12318482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 13316462 - 13316376
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||||||||| || ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  13316462 ctaatttcttgtaacccttttgtatctctttggaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 13316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 20762730 - 20762816
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||||||| |||| ||||||||||||||||||||| ||||||||||||||||| || |||||||||    
T  20762730 ctaatttcttgtaacccttttgtatctcttcgtaa-gaactcattgatagtggattggagagatcaatctctcctacagagtaggtca 20762816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 46064969 - 46065085
Alignment:
Q  3 gttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgt 101  Q
    |||||| ||||||||||||||| ||||| | |||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||| |||||||||  ||    
T  46064969 gttgaagctaatttcttgtaactcatgt-gtatctctttgtaa-gaactcattcatagtggattggagagatcaatctctcccccagagtaggtca-agt 46065065  T
Q  102 tggatcaaactaggtaaaca 121  Q
    |||||| |||| ||||||||    
T  46065066 tggatcgaactgggtaaaca 46065085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 193660 - 193787
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||||||  |||||||||||||||||||| |||||||||||||| ||||| |||| ||||      
T  193660 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaat-aactcattgatagtggattggagagatcaatctcttctccagagtatgtca-a 193756  T
Q  100 gttggatcaaactaggtaaacatttcttggt 130  Q
    |||||| | |||| ||| |||||||||||||    
T  193757 gttggaccgaactgggtgaacatttcttggt 193787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19754544 - 19754625
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  19754544 ttgttgaagctaatttcttgtaaccgatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 19754625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 37503673 - 37503558
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||| |||   |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | || ||||  |    
T  37503673 ttgttgaagctaatttcttgtaaccttgt---atctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattatgtca-ag 37503579  T
Q  101 ttggatcaaactaggtaaaca 121  Q
    ||||||| |||||||| ||||    
T  37503578 ttggatcgaactaggtcaaca 37503558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8550906 - 8550811
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||| ||| ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  8550906 ttgtttaagctaatttcttgtaactcat-ttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 8550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 13138095 - 13137999
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcat 98  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||| |||||||||||||||||||||| |||||||||| | | ||||||||||    
T  13138095 ttgttgaagctaatttcttgtaacccatttgcatctctttgtaa-gaacacattgatagtggattgaagagagcaatctctcccctagagtaggtcat 13137999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3189379 - 3189474
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||| ||||||  | ||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  3189379 ttgttgaagctaatttcctgtaactcttttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctctcatccagagtaggtca 3189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3198196 - 3198291
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||| ||||||  | ||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  3198196 ttgttgaagctaatttcctgtaactcttttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctctcatccagagtaggtca 3198291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3207035 - 3207130
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||| ||||||  | ||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  3207035 ttgttgaagctaatttcctgtaactcttttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctctcatccagagtaggtca 3207130  T

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Target: chr1; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 19752735 - 19752830
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||||||||||| |||||| |||||||||||||||  ||||| |||||||    
T  19752735 ttgttgaagctaatttcttgtaaccgatttgtatctctttgtaa-gaactcattgatagaggattggagagatcaatctctctcccatattaggtca 19752830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28265673 - 28265578
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| |||||||||||||| |||||||||||||||| ||| | |||||||    
T  28265673 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctctcccccagattaggtca 28265578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13659455 - 13659362
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggt 95  Q
    |||||||| |||||||||||| |||   ||  |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  13659455 ttgttgaagctaatttcttgttacccatttatatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagagtaggt 13659362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31659287 - 31659368
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  31659287 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaacttattgatagtggattggagagatcaatctctcc 31659368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 44455209 - 44455304
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||| ||| ||| |||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  44455209 ttgttgaaactaatttcttgtaactcat-ttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 44455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 50167285 - 50167213
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||||||||||   ||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  50167285 ctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattggagagatcaatctctcc 50167213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 834286 - 834191
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| ||| |||||||| ||||||||||||||||||||| ||||||| |||||||| ||| |||||||||    
T  834286 ttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatctatctctcccccagagtaggtca 834191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 4552756 - 4552661
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| ||| |||||||| ||||||||||||| ||||||| ||||||||||||||||  || |||||||||    
T  4552756 ttgttgaagctaatttcttgtaacccctttgtatccctttgtaa-gaactcattgataatggattggagagatcaatctctccctcagagtaggtca 4552661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37282811 - 37282728
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcct 84  Q
    |||||||| ||||||| | |||||| | ||| ||||||||||||||||||||||  |||||||||| |||||| ||||||||||    
T  37282811 ttgttgaagctaatttatggtaacccttttgcatctctttgtaaagaactcattagtagtggattggagagataaatctctcct 37282728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 928095 - 927971
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||  ||||| ||| |||| | |||  ||||||||  |    
T  928095 ttgttgaagctaatttcttgtaacccttttggatctctttgtaaa-aactcattaatagtggattagagagaccaacctcttccccaaggtaggtca-ag 927998  T
Q  101 ttggatcaaactaggtaaacatttctt 127  Q
    || || | |||| ||||||||||||||    
T  927997 ttagaccgaactgggtaaacatttctt 927971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 1833574 - 1833666
Alignment:
Q  4 ttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| |||| |||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  1833574 ttgaagctaaattcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctccaccagattaggtca 1833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 50169320 - 50169248
Alignment:
Q  10 ctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||||||||| ||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  50169320 ctaatttcttgtaactcat-ttgtatctctttgtaa-gtactcattgatagtggattgaagagatcaatctctcc 50169248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 130
Target Start/End: Complemental strand, 44650250 - 44650154
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggt 130  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||| | | | ||||||||| | ||||| | ||||||||||| |||| |||||    
T  44650250 atctctttgtaaataattcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaat-ttggaccgaactaggtaaatattttttggt 44650154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 51765453 - 51765538
Alignment:
Q  10 ctaatttcttgtaacca-tgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtagg 94  Q
    ||||||||||||||||  | ||| ||||||||   ||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  51765453 ctaatttcttgtaaccccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtagg 51765538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 25652135 - 25652290
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||||  | ||| ||||||||||||||||||| ||||||||| | || |||||||  ||| || | ||||| | |||||||    
T  25652135 ttgttgaagctaatttcttgtaactctcttgtatctctttgtaaagaactctttgatagtgaagtg-agagatc--tctatcgtacatagaaagtcattg 25652231  T
Q  101 ttggatcaaactaggtaaacatttc-ttggttttgttctcttttctccactctctttat 158  Q
    ||| | | |||| | |||||| ||| ||||| |||  |||||||||| |||||||||||    
T  25652232 ttgaaccgaactggataaacaattctttggtgttgccctcttttctctactctctttat 25652290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 3460745 - 3460869
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||| |||||||| | ||| || ||||||||||||||  ||||||||| ||||| |||||||||| ||| | | | ||||||||| |     
T  3460745 ttgttgaagctaatttattgtaacccttttgtatatctttgtaaagaacatattgatagtcgattggagagatcaatatcttc-ctagagtaggtcaat- 3460842  T
Q  101 ttggatcaaactaggtaaacatttctt 127  Q
    || || |||| ||||||||||||||||    
T  3460843 ttagaccaaattaggtaaacatttctt 3460869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 9987256 - 9987345
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||| |||| | ||| ||| ||||   ||||||||||||||||||||||| ||||  |||||||||||||| |||||||||    
T  9987256 aatctaatttcttgcaacctt-ttgtatcccttttgcaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtca 9987345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10925272 - 10925356
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaa--agaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||||||  |||| ||||||||||||||||| ||| ||||||||||||    
T  10925272 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaagaagaattcattgatagtggattggagaaatcaatctctcc 10925356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 40282432 - 40282521
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  |||||||||||||| |||||||||    
T  40282432 aatctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtca 40282521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 41136137 - 41136187
Alignment:
Q  267 ccacgaatctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  41136137 ccacgaatctaaatttcattgatgtgagatttggagttaccgaatttacaa 41136187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 36683771 - 36683824
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||| |||||||||    
T  36683771 aagaactcattgatagtggattgtagaaatcaatctctcccccagagtaggtca 36683824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 37559978 - 37559906
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||||||||||   ||| |||||||||||| |||||| ||||||||| |||| ||||||||||||||||    
T  37559978 ctaatttcttgtaacccatttgtatctctttgtaa-gaactcgttgatagtgaattggagagatcaatctctcc 37559906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 44203688 - 44203776
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  44203688 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 44203776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 13938195 - 13938288
Alignment:
Q  11 taatttcttgtaaccatgttgg-atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccata-gtaggtcattgttgg 104  Q
    ||||||||||||||| | || | ||||||||||||  |||||||||||||||||||| |||||||  ||||||| ||| | |||||||||||||||    
T  13938195 taatttcttgtaaccttttttgtatctctttgtaagaaactcattgatagtggattggagagatc--tctctcccccagatgtaggtcattgttgg 13938288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 45644441 - 45644378
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| ||||| ||| | |||||||    
T  45644441 atctctttgtaa-gaactcattgatagtggattggagagatcaatatctcccccagattaggtca 45644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 9036474 - 9036560
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||||||||  |||||||||||| | |||||||||    
T  9036474 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattgaagagtacaatctctcctcgagagtaggtca 9036560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 28242619 - 28242658
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  28242619 attgatacttgctccacgaatctaaatttcattgatgtga 28242658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 44646886 - 44646796
Alignment:
Q  39 ttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggt 130  Q
    ||||||| || ||||| |||||||||||||||||||||||||| | | | ||||||||| | ||||| | ||||||||||| |||| |||||    
T  44646886 ttgtaaataattcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaat-ttggaccgaactaggtaaatattttttggt 44646796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 8871130 - 8871089
Alignment:
Q  53 ttgatagtggattgaagagatcaatctctcctccatagtagg 94  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  8871130 ttgatagtggattggagagatcaatctctcccccatagtagg 8871089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 20622314 - 20622261
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||| ||||  |||||||||||||| |||||||||    
T  20622314 aagaactctttgatagtggattggagagtacaatctctcctccagagtaggtca 20622261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 4535589 - 4535541
Alignment:
Q  12 aatttcttgtaaccatgttggatctctttgtaaagaactcattgatagt 60  Q
    |||||||||||||  | ||| ||||||||||||||||||||||||||||    
T  4535589 aatttcttgtaacatttttgtatctctttgtaaagaactcattgatagt 4535541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 16914294 - 16914234
Alignment:
Q  2 tgttgaatctaa-tttcttgtaaccatgttggatctctttgtaaagaactcattgatagtg 61  Q
    ||||||| |||| |||||| ||||| | ||| |||||||||||||||||||||||||||||    
T  16914294 tgttgaagctaagtttcttctaacccttttgtatctctttgtaaagaactcattgatagtg 16914234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30476565 - 30476486
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctct 81  Q
    ||||||||  |||||| ||||||||   ||| |||||||||||| ||||||||||||| ||||||| | ||||||||||||    
T  30476565 ttgttgaagataatttattgtaacccatttgtatctctttgtaa-gaactcattgatactggattggacagatcaatctct 30476486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 31929413 - 31929373
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaa 294  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  31929413 attgatacttgctccacgaatctaaatttcattgacgtgaa 31929373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 293
Target Start/End: Original strand, 47115486 - 47115525
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  47115486 attgatacttgctccacgaatctaaattttattgatgtga 47115525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 21054013 - 21054102
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||| |||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  ||| |||||||||| |||||||||    
T  21054013 aatctaatttcttgcaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtca 21054102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 317
Target Start/End: Original strand, 22079534 - 22079676
Alignment:
Q  177 ttcgattgtggttttgctttacatttcgtttctagattagatctagatt-gttgttattgtttgtgactatt-ttagttattgatatttgctccacgaat 274  Q
    ||| ||||| ||||||||||||| ||  ||  | ||||||||||||||  |||||| ||| |||||  |||| || || |||||||  ||  |||| |||    
T  22079534 ttcaattgttgttttgctttacacttgtttgtttgattagatctagataagttgttgttgcttgtggttattgtttgtcattgatacatgtcccacaaat 22079633  T
Q  275 ctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    ||||||||||||||| ||| |||| ||||| ||||||||||||    
T  22079634 ctaaatttcattgatatgagatttggagtttccgaattcacaa 22079676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 197017 - 196946
Alignment:
Q  11 taatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||||||||| ||| ||| ||| |||||||| ||||||||||||||||||||| ||||||  ||||||||    
T  197017 taatttcttgtaactcat-ttgtatccctttgtaa-gaactcattgatagtggattggagagatttatctctcc 196946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 3847198 - 3847161
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctct 81  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  3847198 aagaactcattgatagtggattggagagatccatctct 3847161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 16216441 - 16216392
Alignment:
Q  176 gttcgattgtggttttgctttacatttcgtttctagattagatctagatt 225  Q
    ||||||||||||||||||||||| ||| ||  ||| ||||||||||||||    
T  16216441 gttcgattgtggttttgctttacgtttagtcactatattagatctagatt 16216392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 277 - 317
Target Start/End: Complemental strand, 12318358 - 12318318
Alignment:
Q  277 aaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    ||||||||||||||||| |||| ||| ||||||||||||||    
T  12318358 aaatttcattgatgtgagatttggagctaccgaattcacaa 12318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 31925566 - 31925526
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaa 294  Q
    ||||||| |||||| |||||||||||||||||| |||||||    
T  31925566 attgatacttgctctacgaatctaaatttcattaatgtgaa 31925526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 37168609 - 37168645
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatg 290  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  37168609 attgatacttgctctacgaatctaaatttcattgatg 37168645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 390
Target Start/End: Complemental strand, 51841742 - 51841714
Alignment:
Q  362 agttattttccttccattttagtcctttg 390  Q
    |||||||||||||||||||||||||||||    
T  51841742 agttattttccttccattttagtcctttg 51841714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 55302079 - 55301931
Alignment:
Q  13 atttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaact 112  Q
    |||||||||||||   ||| |||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||    
T  55302079 atttcttgtaacctatttgtatctctttgtaa-gaattcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaact 55301981  T
Q  113 aggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
     ||| |||||||||| || ||||| ||||||||  |||||||||||||||    
T  55301980 tggtgaacatttcttagtgttgttatcttttctttactctctttatcttg 55301931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 6095708 - 6095482
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaa 110  Q
    |||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||  |||||| | ||    
T  6095708 taatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-agttggaccgaa 6095611  T
Q  111 ctaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacatttcgtttcta 210  Q
    ||  || ||||||||||||| ||||| ||||||||  |||||||||||||||            |||| ||||||||||||||| |||| ||||||| ||    
T  6095610 ctgtgtgaacatttcttggtgttgttatcttttctttactctctttatcttg--tttatgccttggttggattgtggttttgctatacacttcgtttata 6095513  T
Q  211 gattagatctagattgttgttattgtttgtg 241  Q
    || ||| |||| ||||||||||||| |||||    
T  6095512 gactaggtctatattgttgttattgcttgtg 6095482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 46860523 - 46860827
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| ||||||||||||  |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  46860523 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaat-aactcattgatagtggattggagagatcaatctttcctccagagtaggtcattg 46860621  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacat 200  Q
    ||||| | || | | | ||||||| ||||| ||||| ||||||||  |||||||||||||||            |||| ||||||||||||||| | ||     
T  46860622 ttggaccgaattggatgaacattttttggtgttgttatcttttctttactctctttatcttgtttatccttt--ggttagattgtggttttgctatgcac 46860719  T
Q  201 ttcgtttctagattagatctagattgttgttattgtttgtgactattt------------tagtt---attgatatttgctccacgaatctaaatttcat 285  Q
    || |||| |||||||| |||| ||||||||| |||||||||  |||||            | |||   ||||||||||||||||||||||||||||||||    
T  46860720 ttggtttatagattaggtctatattgttgttgttgtttgtggttatttacatttggttattggttgccattgatatttgctccacgaatctaaatttcat 46860819  T
Q  286 tgatgtga 293  Q
    ||||||||    
T  46860820 tgatgtga 46860827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 49199589 - 49199347
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| |||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| | ||||||||     
T  49199589 ttgttgaagctaatttcttgtaacccattttgtatctctttgtaa-gaactcattgatagtggattggagagattaatctctcctccagactaggtcatg 49199491  T
Q  100 gttggatcaaactaggtaaac-atttcttggttttgttctc---ttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctt 195  Q
    |||||| | |||| ||| ||| || ||||||| ||||| ||   ||||||| |||||||||||||||            |||| |||||||||||||||     
T  49199490 gttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttg--tttatcctttggttagattgtggttttgcta 49199393  T
Q  196 tacatttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
    | || ||  ||||||||||||||||||||||||||||||| |||||    
T  49199392 tgcacttgttttctagattagatctagattgttgttattgcttgtg 49199347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 30236174 - 30236334
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||  |    
T  30236174 ttgttgaagctaatttcttgtaacctatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca-ag 30236271  T
Q  101 ttggatcaaactaggtaaac-atttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||||||| ||| |||||||||| ||||| ||||||||  |||||||||||||||    
T  30236272 ttggaccgaactaggtcaacaatttcttggtgttgttatcttttctttactctctttatcttg 30236334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 54593753 - 54593895
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||| ||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| ||||  |    
T  54593753 ttgttgaagctaatttattgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtatgtca-ag 54593850  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttct 145  Q
    ||||| |||||| ||| ||||||||||||| ||||| ||||||||    
T  54593851 ttggaccaaactgggtgaacatttcttggtgttgttatcttttct 54593895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 41819633 - 41819481
Alignment:
Q  10 ctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatca 108  Q
    |||||||||||||||| || ||| |||||||||||| ||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||||||||| ||    
T  41819633 ctaatttcttgtaacccattttgtatctctttgtaa-gaactcatt-atagtggattggagacatcaatctctcctccagagtaggtcattgttggacca 41819536  T
Q  109 aactaggtaaacatttcttggttttgtt-ctcttttctccactctctttatcttg 162  Q
    |||| ||| ||||||| ||||| |||||  | ||||||| ||| |||||||||||    
T  41819535 aactgggtgaacatttattggtgttgttatttttttctctactttctttatcttg 41819481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 43401921 - 43401679
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||  |||||||||||| ||||||||||||||||||||| ||| || ||||||||||||| ||||||||||     
T  43401921 ttgttgaagctaatttcttgtaacgcattttttatctctttgtaa-gaactcattgatagtggattggagaaattaatctctcctccagagtaggtcatg 43401823  T
Q  100 gttggatcaaactaggtaaac-atttcttggttttgttctc---ttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctt 195  Q
    |||||| | |||| ||| ||| || ||||||| ||||| ||   ||||||| |||||||||||||||            |||| ||||||| |||||||     
T  43401822 gttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttg--tttatcctttggttagattgtgattttgcta 43401725  T
Q  196 tacatttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
    | || ||  ||||||||||||||||||||||||||||||| |||||    
T  43401724 tgcacttgttttctagattagatctagattgttgttattgcttgtg 43401679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 43403864 - 43403622
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| || |||||||||||| ||||||  |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| ||||||||||     
T  43403864 ttgttgaagctcatttcttgtaactcatgttttatctctttgtaa-gaactcattgatagtggattggagagattaatctctcctccagagtaggtcatg 43403766  T
Q  100 gttggatcaaactaggtaaac-atttcttggttttgttct---cttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctt 195  Q
    |||||| | |||| ||| ||| || ||||| | ||||| |    |||||||||||||||||||||||            |||| |||||||||||||||     
T  43403765 gttggaccgaactgggtgaacaatctcttgatgttgttgtttatttttctccactctctttatcttg--tttatcctttggttagattgtggttttgcta 43403668  T
Q  196 tacatttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
    | || ||  |||||||||||||||||||||||| |||||| |||||    
T  43403667 tgcacttgttttctagattagatctagattgttattattgcttgtg 43403622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 19683999 - 19683913
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19683999 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccatagtaggtca 19683913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 37408516 - 37408602
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37408516 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattgaagagatcaatctctcctccagagtaggtca 37408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 33191881 - 33192007
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||| ||||||||||||| ||  || ||||||||||||||||||||||||||||||  |||||||||||||| ||||| || |||||||||    
T  33191881 ttgttgaagctaagttcttgtaaccatttt--atgtctttgtaaagaactcattgatagtggattagagagatcaatctct-ctccagaggaggtcattg 33191977  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    |||||  ||||| ||||||||||| |||||    
T  33191978 ttggacaaaacttggtaaacattttttggt 33192007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7762314 - 7762409
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||||  | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  7762314 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 7762409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34491261 - 34491356
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  34491261 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 34491356  T

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Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 45095221 - 45095307
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  45095221 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctctagagtaggtca 45095307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 4570004 - 4570144
Alignment:
Q  4 ttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgtt 102  Q
    ||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||||||| |   ||    
T  4570004 ttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctactccagagtaggtgaagttt 4570101  T
Q  103 ggatcaaactaggtaaacatttcttggttttgttctcttttct 145  Q
    ||| | |||| ||| ||||||||||||| ||||| | ||||||    
T  4570102 ggaccgaactgggtcaacatttcttggtgttgttatattttct 4570144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 20937705 - 20937866
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||||||  ||||||||||||||| | ||| ||||||||| |||||||||||||||| | ||||| |||||||||||  ||| ||| |||| ||||| |    
T  20937705 ttgttgaagttaatttcttgtaacccttttgtatctctttgaaaagaactcattgata-tagattggagagatcaatcgttcccccaaagtatgtcatag 20937803  T
Q  101 ttggatcaaactaggtaaac-atttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||   |||||||||||| |||  || || | ||||||||||||| |||||||||||||||    
T  20937804 ttggacagaactaggtaaacaattattttgtgtggttctcttttctctactctctttatcttg 20937866  T

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Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 46173406 - 46173549
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||| ||||||||||||||||| |||||||||||||||| ||| | |||||||  |    
T  46173406 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaattcattgatagtggattggagagatcaatctctcccccagattaggtca-ag 46173503  T
Q  101 ttggatcaaactaggtaaac-atttcttggttttgttctcttttct 145  Q
    ||||| | |||||| | ||| |||||||||| ||||| ||||||||    
T  46173504 ttggaccgaactagatcaacaatttcttggtgttgttatcttttct 46173549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 7764513 - 7764608
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || |||||||||||||||  | ||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  7764513 ttgttaaagctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatgaatctctcctccagagtaggtca 7764608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 29810917 - 29811012
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  29810917 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 29811012  T

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Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40735432 - 40735527
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||| |||||||||  ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  40735432 ttgttgaagctaatttattgtaaccagtttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 40735527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 9636236 - 9636150
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||| ||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  9636236 ctaatttcttgtaacccttttgtatctttttgtaa-gaactcattgatagtggattggagagttcaatctctcctccaaagtaggtca 9636150  T

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Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 7780117 - 7780028
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||| | ||| ||||||||   ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  7780117 aatctaatttcttgtaacctt-ttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 7780028  T

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Target: chr3; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 9581331 - 9581426
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || |||||||||| |||||   ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  9581331 ttgtttaagctaatttcttttaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 9581426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22835121 - 22835026
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  22835121 ttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctccgccatattaggtca 22835026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 5258254 - 5258168
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||||||||| || ||||||||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  5258254 ctaatttcttgtaacccttttgtatctctttggaa-gaactcattgatagtggattggagagttcaatctcttctccagagtaggtca 5258168  T

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Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 5260433 - 5260347
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||||||||| || ||||||||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  5260433 ctaatttcttgtaacccttttgtatctctttggaa-gaactcattgatagtggattggagagttcaatctcttctccaaagtaggtca 5260347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 23198049 - 23197963
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||| ||||||| |||||||||||||||| |||| |||| ||||||||||||||| |||||||||    
T  23198049 ctaatttcttgtaacccttttgtatctttttgtaa-gaactcattgatagtgaattggagagttcaatctctcctccagagtaggtca 23197963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 23200248 - 23200162
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||| ||||||| |||||||||||||||| |||| |||| ||||||||||||||| |||||||||    
T  23200248 ctaatttcttgtaacccttttgtatctttttgtaa-gaactcattgatagtgaattggagagttcaatctctcctccagagtaggtca 23200162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 16499078 - 16499171
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggt 95  Q
    |||||||| |||||||||||| |||   ||  |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  16499078 ttgttgaagctaatttcttgttacccatttatatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagagtaggt 16499171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29813112 - 29813193
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  29813112 ttgttgaagctaatttcttgtaacccatttgcatctctttgtaa-gaactcatttatagtggattggagagatcaatctctcc 29813193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 32891153 - 32891280
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| |||||| ||||||||| ||  ||||||||| |    
T  32891153 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcgttgatagtggattggagagataaatctctcccccggagtaggtca-t 32891249  T
Q  100 gttggatcaaactaggtaaacatttcttggt 130  Q
    |||||| | |||| | ||| |||||||||||    
T  32891250 gttggaccgaactggataatcatttcttggt 32891280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 35138825 - 35138724
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||||||  |||||||||| |||  | ||| |||||||||||||||||||||||||||||||| ||||||| ||||||| || | | ||||||||||||    
T  35138825 ttgttgaagttaatttcttgcaactcttttgtatctctttgtaaagaactcattgatagtggatggaagagaacaatctc-ccccaaaagtaggtcattg 35138727  T
Q  101 ttg 103  Q
    |||    
T  35138726 ttg 35138724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 44700597 - 44700516
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  44700597 ttgttgaagctaatttcttgtaacctatttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctctcc 44700516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40734547 - 40734642
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||| ||| ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  40734547 ttgttgaacctaatttcttgtaacacat-ttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccaaattaggtca 40734642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 44331594 - 44331689
Alignment:
Q  1 ttgttgaatctaatttcttgtaa-ccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||| |||| ||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||| | |||||||    
T  44331594 ttgttgaagctaatttcttgtaagccat-ttgtatctctttgtaa-gaacttattgatagtggattggagagatcaatctctcccccagattaggtca 44331689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 760896 - 760991
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  760896 ttgtttaagctaatttcttgtaacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 760991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26323193 - 26323029
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatca-atctctcctcc-atagtaggtcat 98  Q
    |||||||| |||||||||||||||| | ||| || |||| ||||| ||||||||||||||| | || ||| |||  || | ||| || | ||||||||||    
T  26323193 ttgttgaagctaatttcttgtaacctttttgtatatcttggtaaaaaactcattgatagtgaagtggagatatcttatttatccccctagagtaggtcat 26323094  T
Q  99 tgttggatcaaactaggtaaacatttctt-ggttttgttctcttttctccactctctttatcttg 162  Q
    ||||||| | || | |||||||| ||||| ||| || |||||||||||| |||||||||||||||    
T  26323093 tgttggaccgaagtgggtaaacaattctttggtgttattctcttttctctactctctttatcttg 26323029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31314494 - 31314589
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||| ||||||| |||||| |||||||||||||| |||||||||| ||||| ||||| |||||||    
T  31314494 ttgttgaagctaatttcttgtaacccatttgtatctttttgtaa-gaactctttgatagtggattggagagatcaatatctcccccatattaggtca 31314589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36018901 - 36019057
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||||||  |||||||||||||| ||| ||| |||||||||||| ||||||||| ||||||||||| |||| ||||||||||| ||  |||| ||  ||    
T  36018901 ttgttgaagttaatttcttgtaactcattttgtatctctttgtaa-gaactcatt-atagtggattggagaggtcaatctctccccc--agtatgt--tt 36018994  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | |||| | | ||||||| ||||| ||||| |||||| || |||||||||||||||    
T  36018995 gttggaccgaactggatgaacattttttggtgttgttatcttttttctactctctttatcttg 36019057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 801145 - 801236
Alignment:
Q  7 aatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||||| | | ||| ||||||||   ||||||||||||||||||||||| ||||  |||||||||||||| |||||||||    
T  801145 aatctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtca 801236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 29196496 - 29196410
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||| ||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  29196496 ctaatttcttggaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccaaattaggtca 29196410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 51398863 - 51398958
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| ||||||  |||||||| ||| | |||||||    
T  51398863 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatttatctctcccccagattaggtca 51398958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 1683803 - 1683847
Alignment:
Q  273 atctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  1683803 atctaaatttcattgatgtgagatttagagttaccgaattcacaa 1683847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 4055874 - 4055781
Alignment:
Q  11 taatttcttgtaacca-tgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccata-gtaggtcattgttgg 104  Q
    |||||||||||||||  | ||| ||||||||||||  ||||||||||||||||||||||||||||  ||||||| ||| | |||||||||||||||    
T  4055874 taatttcttgtaacctcttttgtatctctttgtaagaaactcattgatagtggattgaagagatc--tctctcccccagatgtaggtcattgttgg 4055781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 102
Target Start/End: Complemental strand, 5433944 - 5433901
Alignment:
Q  59 gtggattgaagagatcaatctctcctccatagtaggtcattgtt 102  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  5433944 gtggattggagagatcaatctctcctccatagtaggtcattgtt 5433901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 40913352 - 40913437
Alignment:
Q  11 taatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||| ||| ||| |||||||||||| |||||||| |||||||||||| |||||||||||||||| ||| | |||||||    
T  40913352 taatttcttgtaactcat-ttgtatctctttgtaa-gaactcatcgatagtggattggagagatcaatctctcccccagattaggtca 40913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5236575 - 5236498
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatct 79  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||| ||||||  ||||||||||||    
T  5236575 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgataatggattcgagagatcaatct 5236498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29682408 - 29682489
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||| || |||||||||||| |||   ||| ||| |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  29682408 ttgtttaagctaatttcttgtcacccatttgtatccctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 29682489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 3617506 - 3617594
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  3617506 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 3617594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 25637483 - 25637571
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  25637483 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 25637571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 5270683 - 5270743
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaaatttagagttaccgaattca 314  Q
    |||||||||| | ||| |||| |||||||||||||||||| |||| |||||||||||||||    
T  5270683 attgatattttcaccatgaatataaatttcattgatgtgagattttgagttaccgaattca 5270743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 2075149 - 2075071
Alignment:
Q  47 aactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttct 126  Q
    |||| ||||||||||||||  |||||||||||||||| | | |||||||||  |||||||| |||| |||||||||||||    
T  2075149 aactaattgatagtggatttgagagatcaatctctccccgagagtaggtca-agttggatcgaactgggtaaacatttct 2075071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 27305777 - 27305734
Alignment:
Q  54 tgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||| |||||||||||||||||||| |||||||||    
T  27305777 tgatagtggattggagagatcaatctctcctccaaagtaggtca 27305734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 41819379 - 41819340
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  41819379 attgatacttgctccacgaatctaaatttcattgatgtga 41819340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 47304342 - 47304381
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  47304342 aagaactcattgatagtggattggagagatcaatctctcc 47304381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 53921622 - 53921541
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    ||||| || ||||||||||||||| ||| ||| |||  ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  53921622 ttgttaaagctaatttcttgtaactcat-ttgtatcattttgt-aagaactcattgatagtggattggagagatcaatctctcc 53921541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2020188 - 2020245
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgata 58  Q
    |||||||| |||||||||| ||||| | ||| || |||||||||||||||||||||||    
T  2020188 ttgttgaagctaatttcttataaccgttttgtatttctttgtaaagaactcattgata 2020245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 5270592 - 5270641
Alignment:
Q  175 ggttcgattgtggttttgctttacatttcgtttctagattagatctagat 224  Q
    ||||||||||||||||||| ||||| || ||| |||||||||||||||||    
T  5270592 ggttcgattgtggttttgcattacacttggttgctagattagatctagat 5270641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32744555 - 32744460
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||| ||| ||| ||| |||||||| |||||| ||||||||||||||||||||| ||||| ||| ||| | |||||||    
T  32744555 ttgtttaagctaatttcttgtaactcat-ttgtatcactttgtaa-gaactctttgatagtggattgaagagataaatctatcccccagattaggtca 32744460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 39153480 - 39153385
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||| ||| ||| ||| |||| | ||||||||||||||||||||||| ||||| |||||||||| ||| | |||||||    
T  39153480 ttgtttaagctaatttcttgtaactcat-ttgtatccctttat-aagaactcattgatagtggattggagagaacaatctctcccccagattaggtca 39153385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 4598607 - 4598547
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  4598607 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 4598547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 10056303 - 10056363
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  10056303 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 10056363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 10058525 - 10058585
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  10058525 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 10058585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 10060747 - 10060807
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  10060747 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 10060807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 10062969 - 10063029
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  10062969 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 10063029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 10065191 - 10065251
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  10065191 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 10065251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 10209259 - 10209319
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  10209259 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 10209319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 10211479 - 10211539
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  10211479 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 10211539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 36019162 - 36019202
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtgaa 294  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  36019162 attgatacttgctccacgaatctaaatttcattgatatgaa 36019202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 39127636 - 39127756
Alignment:
Q  41 gtaaagaactcattgatag-tggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggttttgttctc 139  Q
    ||||| ||||||||||||  ||||||  | |||||||||||||||||| || ||||||||||||||   ||||   ||||| ||||||| | || ||||     
T  39127636 gtaaataactcattgataaatggatttgaaagatcaatctctcctccagagcaggtcattgttggactgaacttaataaacttttcttgatattattctt 39127735  T
Q  140 ttttctccactctctttatct 160  Q
    ||||||| || ||||||||||    
T  39127736 ttttctctaccctctttatct 39127756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 6716557 - 6716643
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  ||| |||||||||| |||||||||    
T  6716557 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtca 6716643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 40519316 - 40519258
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagt 60  Q
    ||||||||  |||||||||||||  || ||| ||||||||||||||||||||||||||||    
T  40519316 ttgttgaagttaatttcttgtaat-attttgtatctctttgtaaagaactcattgatagt 40519258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 46173670 - 46173736
Alignment:
Q  254 attgatatttgctccac--gaatctaaatttcattgatgtgaaatttagagtt-accgaattcacaa 317  Q
    ||||||| |||||||||  |||||||||||||||||||||||| ||| || || |||||||||||||    
T  46173670 attgatacttgctccacacgaatctaaatttcattgatgtgaagtttggaattgaccgaattcacaa 46173736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 51352219 - 51352150
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctc 82  Q
    ||||||||||||||||| ||| || |||||||||  |||||||||| ||||||||  |||||||||||||||    
T  51352219 taatttcttgtaaccat-ttgtatttctttgtaat-aactcattgagagtggatttgagagatcaatctctc 51352150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 54635182 - 54635268
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  ||| |||||||||| |||||||||    
T  54635182 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtca 54635268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 1683556 - 1683623
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgtt 102  Q
    |||||||||||||||||||||| |||||| | || |||||||  ||||| | ||||||||| ||||||||    
T  1683556 atctctttgtaaagaactcatttatagtgaagtggagagatc--tctcttccccatagtagatcattgtt 1683623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 23392018 - 23391933
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||   ||| ||| ||||| || |||||| |||||||||||||| |||||| ||||||||| ||| | |||||||    
T  23392018 taatttcttgtaacccatttgtatcactttgcaa-gaactctttgatagtggattgtagagataaatctctcccccaaattaggtca 23391933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 45283076 - 45283130
Alignment:
Q  44 aagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  45283076 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 45283130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 1683694 - 1683743
Alignment:
Q  175 ggttcgattgtggttttgctttacatttcgtttctagattagatctagat 224  Q
    |||||||||||||||||  |||||| |  |||||||||||||||||||||    
T  1683694 ggttcgattgtggttttattttacactaggtttctagattagatctagat 1683743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 50432592 - 50432543
Alignment:
Q  175 ggttcgattgtggttttgctttacatttcgtttctagattagatctagat 224  Q
    |||| ||||||||||||||||| || |||||| ||||||| |||||||||    
T  50432592 ggtttgattgtggttttgctttccacttcgttgctagattggatctagat 50432543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 54739041 - 54739008
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattg 66  Q
    |||||| |||||||||||||||||||||||||||    
T  54739041 atctctctgtaaagaactcattgatagtggattg 54739008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 4075581 - 4075488
Alignment:
Q  11 taatttcttgtaacca-tgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccata-gtaggtcattgttgg 104  Q
    |||||||||||||||  | ||| ||| ||||||||  ||||| |||||||||||||| ||||||||  |||||| ||| | |||||||||||||||    
T  4075581 taatttcttgtaacctcttttgtatcactttgtaagaaactctttgatagtggattggagagatca--ctctcccccagatgtaggtcattgttgg 4075488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 4600828 - 4600768
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||| | |||||||||    
T  4600828 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctctagagtaggtca 4600768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 10 - 156
Target Start/End: Original strand, 10547 - 10691
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaa 109  Q
    ||||||| |||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||  |||||| | |    
T  10547 ctaatttattgtaaccattttgtatctctttgtaa-gaactcgttgatagtggattgaagagatcaatctctcctccagagtaggtca-agttggaccga 10644  T
Q  110 actaggtaaacatttcttggttttgttctcttttctccactctcttt 156  Q
    ||| ||||||||||||||||| ||||| ||||| ||| |||||||||    
T  10645 actgggtaaacatttcttggtgttgttatctttcctctactctcttt 10691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 8e-37; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 316811 - 317032
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||||||| | | ||| |||||||||||||||||||||||||| ||||| | || ||||||||||||| | | ||||||||||||    
T  316811 ttgttgaagctaatttcttgtaatccttttgtatctctttgtaaagaactcattgataatggatcggagggatcaatctctcccctagagtaggtcattg 316910  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacat 200  Q
    ||||| | |||| |||||||| ||||| || ||||||||||||| | ||||||||||| |||            ||||| |||||||||||||||||||     
T  316911 ttggaccgaacttggtaaacaattctttgtgttgttctcttttccctactctctttattttg--tttattctttggttcaattgtggttttgctttacac 317008  T
Q  201 ttcgtttctagattagatctagat 224  Q
    || ||| |||||| ||||||||||    
T  317009 ttggttgctagataagatctagat 317032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27637732 - 27637572
Alignment:
Q  1 ttgttgaatctaatttcttgtaacc-atgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    ||||| || |||||||||||||||| || ||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||| || |||||||||||    
T  27637732 ttgtttaaactaatttcttgtaacccattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctgcagagtaggtcatt 27637635  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | |||| ||| || |||||||||| ||||| ||||||||  |||||||||||||||    
T  27637634 gttggaccgaactgggtgaatatttcttggtgttgttatcttttctttactctctttatcttg 27637572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 213514 - 213654
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||| || ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||       
T  213514 ttgttaaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagt 213612  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttt 142  Q
    ||||| | |||| ||| ||||||||||||| ||||| |||||    
T  213613 ttggaccgaactgggtgaacatttcttggtgttgttatcttt 213654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 5058094 - 5058253
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||| ||||||||| ||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| | |||||||||  |    
T  5058094 ttgttgaagctattttcttgtatcccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctctagagtaggtca-ag 5058191  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  5058192 ttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 5058253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 13695810 - 13695682
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    ||||| || |||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||       
T  13695810 ttgttaaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattaatagtggattagagagattattctctcctccatagtaggtca-ac 13695712  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| ||||||||||||||||||||||||    
T  13695711 ttggaccaaactaggtaaacatttcttggt 13695682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 40147310 - 40147469
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||      
T  40147310 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca-a 40147406  T
Q  100 gttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    |||||| | |||| ||| ||||||| || || || || ||||||||  ||||| |||||||||    
T  40147407 gttggaccgaactgggtgaacatttttttgtgtttttatcttttctttactctatttatcttg 40147469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 28278365 - 28278492
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||  |    
T  28278365 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaaa-aactcattgatagtggattggagagatcaatctctcctccagagtaggtca-ag 28278462  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| | |||| ||| |||| ||||||||    
T  28278463 ttggaccgaactgggtgaacaattcttggt 28278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 13239800 - 13239895
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||||  | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  13239800 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 13239895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 25412818 - 25412904
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  25412818 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 25412904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 16452129 - 16452256
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||| ||||||||||| |||||| ||||||||| ||| |||||||||  |    
T  16452129 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattcatagtggattggagagataaatctctcccccagagtaggtca-ag 16452226  T
Q  101 ttggatcaaactaggtaaacatttcttggt 130  Q
    ||||| | |||| |||||||||||||||||    
T  16452227 ttggaccgaactgggtaaacatttcttggt 16452256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33831729 - 33831824
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||| || ||||||||||||||||   ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  33831729 ttgtttaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattgaagagatcaatctctcccccatattaggtca 33831824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42428549 - 42428454
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  42428549 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccatattaggtca 42428454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 10054935 - 10054817
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| |||||||||| ||||| | ||| |||||||||||| |||||||||||||||| |||| ||| |||||| ||||| ||| ||| ||| ||||    
T  10054935 ttgttgaagctaatttcttataacctt-ttgtatctctttgtaatgaactcattgatagtgtattggagatatcaatatctcccccaaagtgggtaattg 10054837  T
Q  101 ttggatcaaactaggtaaac 120  Q
    ||||| ||||||||||||||    
T  10054836 ttggaccaaactaggtaaac 10054817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9049461 - 9049368
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggt 95  Q
    |||||||| |||||||||||||||||| ||| |||||||||||| ||||||||||| ||||||||| |||||||||| ||||| ||| |||||||    
T  9049461 ttgttgaagctaatttcttgtaaccattttgtatctctttgtaa-gaactcattgacagtggattggagagatcaatatctcccccaaagtaggt 9049368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 37439200 - 37439285
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||  | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  37439200 taatttcttgtaactcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 37439285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3325962 - 3326063
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||||  || |||||||||||||||||||| |||| |||||||  |||||||||| ||||   |||||||||||||||    
T  3325962 ttgttgaagctaatttcttgtaaccattgtgtatctctttgtaaagaactcaatgatggtggattagagagatcaatatctctcacatagtaggtcattg 3326061  T
Q  101 tt 102  Q
    ||    
T  3326062 tt 3326063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 4160702 - 4160791
Alignment:
Q  56 atagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggttttgttctcttttct 145  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||| |||||| |||| || || ||||| ||||||||    
T  4160702 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccaaactgggtaaatatttattagtgttgttatcttttct 4160791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 538074 - 538169
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||| |||||||    
T  538074 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtagattggagagatcaatctctcccccatattaggtca 538169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 30793195 - 30793312
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaa 110  Q
    |||||| |||||||||| ||| |||||||||||||||||| |||||||||| | || |||||||  ||||||| | | |||| |||||||||||| | ||    
T  30793195 taatttattgtaaccattttgtatctctttgtaaagaactaattgatagtgaagtggagagatc--tctctcccctagagtaagtcattgttggaccgaa 30793292  T
Q  111 ctaggtaaacatttcttggt 130  Q
    | ||||||||||||||||||    
T  30793293 caaggtaaacatttcttggt 30793312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 9789338 - 9789248
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||  | ||| ||||||||   ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  9789338 aatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 9789248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13488252 - 13488333
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  13488252 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 13488333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 16409529 - 16409619
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||  | ||| ||||||||   ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  16409529 aatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 16409619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 26177936 - 26178026
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||  | ||| ||||||||   ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  26177936 aatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 26178026  T

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Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 39468668 - 39468575
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggt 95  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||  |||||||||||||||| ||||| |||||    
T  39468668 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattagagagatcaatctctcccccatattaggt 39468575  T

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Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 13343119 - 13343205
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcat 98  Q
    |||||||||||||| | | ||| |||||||||  ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  13343119 ctaatttcttgtaatccttttgtatctctttg--aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcat 13343205  T

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Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 533818 - 533913
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||| ||||||||   ||| |||||||||||| ||||||||||||||||||||| | |||||||||||||| ||||| |||||||    
T  533818 ttgttgaagctaattttttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggaaagatcaatctctcccccatattaggtca 533913  T

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Target: chr5; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 36074152 - 36074067
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||  | ||| |||||||||  ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  36074152 ctaatttcttgtaactcttttgtatctctttg--aagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtca 36074067  T

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Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 18441762 - 18441672
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||  | ||| ||||||||   ||||||||||||||||||||||| |||| ||||||||||||| | |||||||||    
T  18441762 aatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctctagagtaggtca 18441672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33906150 - 33906024
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||| ||| |||| ||||||||| | | ||| |||||||||||||||||||||||||||| ||||| | |||||||||||| | | | ||||||||| ||    
T  33906150 ttgtcgaagctaacttcttgtaatccttttgtatctctttgtaaagaactcattgatagtagattggaaagatcaatctcttccctagagtaggtcaatg 33906051  T
Q  101 ttggatcaaactaggtaaacatttctt 127  Q
    ||||| | | || |||||||| |||||    
T  33906050 ttggaccgagctgggtaaacaattctt 33906024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42426354 - 42426273
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||| ||||   ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  42426354 ttgttgaagctaatttcttgcaacccatttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcc 42426273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 3075773 - 3075650
Alignment:
Q  5 tgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttgg 104  Q
    |||||||||||||||||||||   ||| |||| ||||||| ||| || ||||||||| |||| ||||||||||||||||  ||||||||||||  |||||    
T  3075773 tgaatctaatttcttgtaacccatttgtatctttttgtaa-gaattcgttgatagtgaattggagagatcaatctctccctcatagtaggtca-agttgg 3075676  T
Q  105 atcaaactaggtaaacatttcttggt 130  Q
    | |||| | ||| |||||||||||||    
T  3075675 accaaattgggtgaacatttcttggt 3075650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 317
Target Start/End: Complemental strand, 16641008 - 16640739
Alignment:
Q  53 ttgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggttttgttctcttttc--tccact 150  Q
    |||||||||||||| |||||||||||||||||||| |||||||||  || ||  | |||| ||||||||||||||||| ||||| |||||||  | | ||    
T  16641008 ttgatagtggattggagagatcaatctctcctccagagtaggtca-agtagggccgaactgggtaaacatttcttggtgttgttatcttttctttgctct 16640910  T
Q  151 ctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgctttacatttcgtttctagattagatctagattgttgttattgtttgtgactattt-- 248  Q
    || |||||||||             |||  |||||||||||| | | |||||  ||||||||||| ||||||||| ||||| ||| |||||  |||||      
T  16640909 ctatttatcttgcttattcttta--gttaaattgtggttttgttatgcatttgatttctagattaaatctagatttttgttgttgcttgtggttattttc 16640812  T
Q  249 ---tagttattgatatttgctccacgaatctaaatttcattgatgtgaaatttagagtt-accgaattcacaa 317  Q
       | |||||||||| |||||||||||||||||| || ||||| ||||| |||||| ||  ||||||||||||    
T  16640811 tggttgttattgatacttgctccacgaatctaaaatttattgacgtgaagtttagaattgtccgaattcacaa 16640739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 162
Target Start/End: Original strand, 27015604 - 27015730
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggttt 132  Q
    |||||||||||| ||||||||||||||||||||| | |||||||||||||||||| | |||||||  |||||| | |||| ||| ||||||| |||| |     
T  27015604 atctctttgtaa-gaactcattgatagtggattgtacagatcaatctctcctccaaaataggtca-agttggaccgaactgggtgaacattttttgg-tg 27015700  T
Q  133 tgttctcttttctccactctctttatcttg 162  Q
    |||| | ||||||  |||||||||||||||    
T  27015701 tgttattttttctttactctctttatcttg 27015730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 30683043 - 30682946
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaaga-actcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| |||||||||||||||| | ||| || |||||||||  | ||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  30683043 ttgttgaagctaatttcttgtaacccttttgtatttctttgtaagaatactcattgatagtggattggagagatcaatctctcccccagattaggtca 30682946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 42310054 - 42309963
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtag 93  Q
    |||||||| |||||||||||||||  | ||| |||||||||||| ||||| ||||||||||||||   ||||||||||||||| |||||||||    
T  42310054 ttgttgaagctaatttcttgtaactcttttgtatctctttgtaa-gaacttattgatagtggattagcgagatcaatctctcccccatagtag 42309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 30182646 - 30182732
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||  ||||||||| || ||||||||||||||||||||| |||| ||||||||||||||| |||| ||||    
T  30182646 ctaatttcttgtaacccttttctatctctttggaa-gaactcattgatagtggattggagagttcaatctctcctccagagtatgtca 30182732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 32636882 - 32636968
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||   ||| |||||||||||| |||||| |||||||||||||| |||||||||||||||| ||| | |||||||    
T  32636882 ctaatttcttgtaacccatttgtatctctttgtaa-gaactctttgatagtggattggagagatcaatctctcccccagattaggtca 32636968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 31183031 - 31183115
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| ||| ||| |||||||| ||||||||||||| ||||||| ||||||| |||||||| ||||| |||||||    
T  31183031 taatttcttgtaaccat-ttgtatccctttgtaa-gaactcattgatactggattggagagatctatctctcccccatattaggtca 31183115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38747054 - 38747135
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| ||||||||||||||||   ||| ||||||||| ||| ||||||||||||| |||||| ||||||||||||||||    
T  38747054 ttgttgaagctaatttcttgtaacccatttgtatctctttggaaa-aactcattgatagaggattggagagatcaatctctcc 38747135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 26170853 - 26170906
Alignment:
Q  44 aagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  26170853 aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 26170906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 42926972 - 42927067
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttcttggt 130  Q
    |||||||||||| ||||||||||| ||||||||||||| || ||||||||   ||||||||||||  |||||| | |||| |||||||||||||||||    
T  42926972 atctctttgtaa-gaactcattgacagtggattgaagaaataaatctctctctcatagtaggtca-agttggaccgaactgggtaaacatttcttggt 42927067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28750774 - 28750679
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||  ||||||| |||||||   ||| |||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||| | |||||||    
T  28750774 ttgttgaagttaatttcctgtaacccatttgtatctttttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagattaggtca 28750679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 162
Target Start/End: Complemental strand, 10700736 - 10700608
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattgttggatcaaactaggtaaacatttc-ttggtt 131  Q
    ||||||||  ||||||||||||||||||| | || |||||||  ||||||| ||||||||||||||||||  | | ||||  ||||| | ||| || ||     
T  10700736 atctctttaaaaagaactcattgatagtgaagtggagagatc--tctctcccccatagtaggtcattgtttcaccgaactgagtaaataattctttcgtg 10700639  T
Q  132 ttgttctcttttctccactctctttatcttg 162  Q
    ||||||||||||||| || ||||||||||||    
T  10700638 ttgttctcttttctctacgctctttatcttg 10700608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 29722579 - 29722668
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  |||||||||||||| |||||||||    
T  29722579 aatctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtca 29722668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 29751273 - 29751184
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  |||||||||||||| |||||||||    
T  29751273 aatctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtca 29751184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8566065 - 8565985
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctc 82  Q
    ||||| || ||||||||||||||||   ||| ||| || ||||| ||||||||||||||||||||| |||||||||||||||    
T  8566065 ttgtttaagctaatttcttgtaacccatttgtatccctctgtaa-gaactcattgatagtggattggagagatcaatctctc 8565985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 25078177 - 25078265
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  25078177 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 25078265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 25136146 - 25136234
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  25136146 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 25136234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 40380147 - 40380235
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| |||| |||| |||||||||| |||||||||    
T  40380147 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagttcaaactctcctccagagtaggtca 40380235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 40382358 - 40382446
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| |||| |||| |||||||||| |||||||||    
T  40382358 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagttcaaactctcctccagagtaggtca 40382446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8445764 - 8445846
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcc 83  Q
    |||||||| |||||||||||||||| | ||| || ||||| ||||||||| ||||||||| ||||  | |||| |||||||||    
T  8445764 ttgttgaagctaatttcttgtaacccttttgtatttctttataaagaactaattgatagtagattagaaagatgaatctctcc 8445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 19806453 - 19806507
Alignment:
Q  43 aaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||| | |||||||    
T  19806453 aaagaactccttgatagtggattggagagatcaatctctcccccagattaggtca 19806507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 29720419 - 29720508
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||| | ||| ||| ||||   |||||||| |||||||||||||| ||||  |||||||||||| | |||||||||    
T  29720419 aatctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctctagagtaggtca 29720508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 35616228 - 35616278
Alignment:
Q  11 taatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtg 61  Q
    ||||||||||||||| | ||| || ||||||||||||||||||||||||||    
T  35616228 taatttcttgtaacccttttgtatttctttgtaaagaactcattgatagtg 35616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 16546687 - 16546775
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  16546687 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 16546775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 10593315 - 10593402
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   ||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  10593315 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 10593402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 16544493 - 16544553
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||||    
T  16544493 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 16544553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 22536400 - 22536314
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| ||||   |||||||| ||||||||||||||  |||  |||||||||||||| |||||||||    
T  22536400 ctaatttcttgtaacctt-ttgtatcccttttgtaagaactctttgatagtggattggggagtacaatctctcctccagagtaggtca 22536314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 317089 - 317138
Alignment:
Q  267 ccacgaatctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    ||||||||||||||||||||||||||| |||| ||||| || |||||||||    
T  317089 ccacgaatctaaatttcattgatgtgagatttggagtttcc-aattcacaa 317138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 5007812 - 5007849
Alignment:
Q  33 atctctttgtaaagaactcattgatagtggattgaaga 70  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  5007812 atctctttgtaaagaactcattgatagtgaagtgaaga 5007849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 8038418 - 8038467
Alignment:
Q  175 ggttcgattgtggttttgctttacatttcgtttctagattagatctagat 224  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||| ||||    
T  8038418 ggttcgattgtggtttttctttacacttggttgctagattagatcaagat 8038467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 10054655 - 10054610
Alignment:
Q  272 aatctaaatttcattgatgtgaaatttagagttaccgaattcacaa 317  Q
    |||||||||||||||||| ||| ||||| |||||||||||| ||||    
T  10054655 aatctaaatttcattgatatgagatttaaagttaccgaatttacaa 10054610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 10054761 - 10054713
Alignment:
Q  177 ttcgattgtggttttgctttacatttcgtttctagattagatctagatt 225  Q
    |||||||||  |||||||||||| || ||| ||||||||||||||||||    
T  10054761 ttcgattgtaattttgctttacacttggttgctagattagatctagatt 10054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 40751202 - 40751262
Alignment:
Q  181 attgtggttttgctttacatttcgtttctagattagatctagattgttgttattgtttgtg 241  Q
    |||||||||||||| | || || |||| |||||||| |||| ||||||||||||| |||||    
T  40751202 attgtggttttgctatgcacttggtttatagattaggtctatattgttgttattgcttgtg 40751262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 27562 - 27439
Alignment:
Q  1 ttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcatt 99  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  27562 ttgttgaagctaatttcttgtaactcat-ttgtatctctttgtaaataacttattgatagtggattggagagatcaatctctcccccatagtaggtcatt 27464  T
Q  100 gttggatcaaactaggtaaacattt 124  Q
    |||||| | || |||||||||||||    
T  27463 gttggaccgaattaggtaaacattt 27439  T

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Target: scaffold0466 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 7376 - 7535
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtcattg 100  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| ||||||||||||||||||||| | |||||||||||||||| | ||||||| |  |    
T  7376 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactcattgatagtggattggaaagatcaatctctcctctagagtaggtta-ag 7473  T
Q  101 ttggatcaaactaggtaaacatttcttggttttgttctcttttctccactctctttatcttg 162  Q
    ||||| | |||| ||| ||||||||||||| ||||| ||||||||  |||||||||||||||    
T  7474 ttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttg 7535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 315
Target Start/End: Complemental strand, 1344 - 1204
Alignment:
Q  175 ggttcgattgtggttttgctttacatttcgtttctagattagatctagattgttgttattgtttgtgactattttagttattgatatttgctccacgaat 274  Q
    |||| |||||||||||| ||||||| || ||||||||||||||||||||||||| || ||  || ||  |||||| |||||||||||||||| ||| |||    
T  1344 ggtttgattgtggttttactttacacttggtttctagattagatctagattgttattgttacttttggatattttggttattgatatttgcttcacaaat 1245  T
Q  275 ctaaatttcattgatgtgaaatttagagttaccgaattcac 315  Q
    || |||||||||||| ||| |||| ||||| ||||||||||    
T  1244 cttaatttcattgatttgagatttggagtttccgaattcac 1204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 434591 - 434677
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  434591 ctaatttcttgtaacccttttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 434677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 490440 - 490125
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatca--atctctcctccatagtaggtcat 98  Q
    |||||||| |||||||||||||||  | ||| || ||||||||||| |||||||||||||| |  | ||||||||   ||||||| ||||||||||| |     
T  490440 ttgttgaagctaatttcttgtaactcttttgtatatctttgtaaagtactcattgatagtgaagcggagagatcattctctctcccccatagtaggttag 490341  T
Q  99 tgttggatcaaactaggtaaac-atttcttggttttgttctcttttctccactctctttatcttgnnnnnnnnnnnnggttcgattgtggttttgcttta 197  Q
    ||||| |   |||| ||||||| |||  ||| | ||||||| ||||||  |||||||||||||||            |||| | ||||||||||||| ||    
T  490340 tgttgaactgaactgggtaaacaattatttgatgttgttct-ttttctttactctctttatcttg----attattttggtttgtttgtggttttgctata 490246  T
Q  198 catttcgtttctagattagatctagat-tgttgttattgtttgtgactattttagtt---attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    || || ||| ||||||||||||||||| | ||||| ||| ||| |  |||||| |||   ||||||| ||||||||| ||||||||||||||||| ||||    
T  490245 cacttggttgctagattagatctagatatattgttgttgcttgcggttattttggttgccattgatacttgctccacaaatctaaatttcattgacgtga 490146  T
Q  294 aatttagagttaccgaattca 314  Q
     |||   ||||||||||||||    
T  490145 gattagaagttaccgaattca 490125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 114660 - 114744
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggt 95  Q
    |||||||||||||||  | ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  114660 ctaatttcttgtaacgcttttgtatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcctccagagtaggt 114744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 8849 - 8759
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||| | ||| ||||||||   |||||||| |||||||||||||| |||| ||||||||||||||| |||||||||    
T  8849 aatctaatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtca 8759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 11275 - 11185
Alignment:
Q  7 aatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||||| | ||| ||||||||   |||||||| |||||||||||||| |||| ||||||||||||||| |||||||||    
T  11275 aatctaatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtca 11185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 974 - 1059
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| |||||||||  || |||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  974 ctaatttcttgtaacccttttgtatctctttg--aacaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 1059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 11615 - 11701
Alignment:
Q  10 ctaatttcttgtaac-catgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  11615 ctaatttcttgtaactcat-ttgtatctctttgtaa-gaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 11701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 149216 - 149123
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggt 95  Q
    |||||||| |||||||||||| |||   ||  |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  149216 ttgttgaagctaatttcttgttacccatttatatctctttgtaa-gaactcattgatagtggattggagagatcaatctctcccccagagtaggt 149123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 20534 - 20439
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||| ||||||||||||||||   ||| |||||||||||| |||||| |||||| ||||||| |||||||||||||||| ||| | |||||||    
T  20534 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-gaactctttgatattggattggagagatcaatctctcccccagattaggtca 20439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 3810 - 3750
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||||| |||||||||    
T  3810 tttgtaaagaactcatttgatagtggattggagagttcaatctctcctccagagtaggtca 3750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25102 - 25162
Alignment:
Q  1 ttgttgaatctaatttcttgtaaccatgttggatctctttgtaaagaactcattgatagtg 61  Q
    ||||||||  ||||||||||||||| | ||| |||||||||||||||||||||||||||||    
T  25102 ttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaagaactcattgatagtg 25162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 2716 - 2628
Alignment:
Q  10 ctaatttcttgtaaccatgttggatctcttt-gtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggtca 97  Q
    |||||||||||||||| | ||| ||| |||| |||||||||||||| |||||||||||| ||||  |||||||||||||| |||||||||    
T  2716 ctaatttcttgtaacc-tcttgtatcccttttgtaaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 293
Target Start/End: Complemental strand, 3446 - 3407
Alignment:
Q  254 attgatatttgctccacgaatctaaatttcattgatgtga 293  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  3446 attgatacttgctccatgaatctaaatttcattgatgtga 3407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 6357 - 6415
Alignment:
Q  38 tttgtaaagaactcatt-gatagtggattgaagagatcaatctctcctccatagtaggt 95  Q
    ||||||||||||||||| |||||||||||| ||||  ||| |||||||||| |||||||    
T  6357 tttgtaaagaactcatttgatagtggattggagagtacaaactctcctccagagtaggt 6415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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