View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2568_low_31 (Length: 335)

Name: NF2568_low_31
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2568_low_31
NF2568_low_31
[»] chr6 (20 HSPs)
chr6 (4-335)||(19162824-19163165)
chr6 (296-335)||(33549145-33549184)
chr6 (295-335)||(9626073-9626113)
chr6 (295-335)||(12234502-12234542)
chr6 (291-335)||(13227149-13227193)
chr6 (295-335)||(28841455-28841495)
chr6 (299-335)||(30127441-30127477)
chr6 (300-335)||(10338174-10338209)
chr6 (297-331)||(12216789-12216823)
chr6 (297-335)||(23910108-23910146)
chr6 (298-335)||(346571-346608)
chr6 (306-335)||(13661561-13661590)
chr6 (298-335)||(16405126-16405163)
chr6 (298-335)||(24641188-24641225)
chr6 (306-335)||(31622997-31623026)
chr6 (295-331)||(6385907-6385943)
chr6 (295-335)||(6691546-6691585)
chr6 (295-335)||(11423607-11423647)
chr6 (295-335)||(12633050-12633090)
chr6 (298-334)||(34444845-34444881)
[»] chr3 (41 HSPs)
chr3 (277-334)||(21960593-21960650)
chr3 (296-335)||(10445135-10445174)
chr3 (298-335)||(47454615-47454652)
chr3 (295-335)||(4844506-4844546)
chr3 (295-335)||(4870202-4870242)
chr3 (295-335)||(14186688-14186728)
chr3 (295-335)||(44743850-44743890)
chr3 (295-335)||(51903873-51903913)
chr3 (296-335)||(36720422-36720461)
chr3 (296-335)||(37788461-37788500)
chr3 (297-335)||(30311347-30311385)
chr3 (297-335)||(33899655-33899693)
chr3 (297-335)||(52769980-52770018)
chr3 (291-335)||(2597211-2597255)
chr3 (295-335)||(31520600-31520640)
chr3 (296-335)||(2667903-2667942)
chr3 (296-335)||(3427549-3427588)
chr3 (295-334)||(20501738-20501777)
chr3 (296-335)||(27093357-27093396)
chr3 (296-335)||(27259202-27259241)
chr3 (296-335)||(28703400-28703439)
chr3 (296-335)||(30510195-30510234)
chr3 (296-335)||(31608520-31608559)
chr3 (296-335)||(39253738-39253777)
chr3 (296-335)||(53412986-53413025)
chr3 (296-334)||(16354888-16354926)
chr3 (301-335)||(45229275-45229309)
chr3 (296-333)||(13808881-13808918)
chr3 (298-335)||(14339651-14339688)
chr3 (298-335)||(17108896-17108933)
chr3 (297-334)||(19154673-19154710)
chr3 (298-335)||(19716238-19716275)
chr3 (296-333)||(29563943-29563980)
chr3 (298-335)||(33861732-33861769)
chr3 (301-334)||(45308903-45308936)
chr3 (298-335)||(49494144-49494181)
chr3 (298-335)||(54990743-54990780)
chr3 (302-334)||(9557362-9557394)
chr3 (295-335)||(10499104-10499144)
chr3 (295-335)||(30715783-30715823)
chr3 (299-335)||(44069799-44069835)
[»] chr8 (29 HSPs)
chr8 (295-335)||(968403-968443)
chr8 (298-335)||(16852381-16852418)
chr8 (295-335)||(35641896-35641936)
chr8 (300-335)||(29858049-29858084)
chr8 (299-333)||(11928730-11928764)
chr8 (296-333)||(33017257-33017294)
chr8 (295-335)||(3624621-3624661)
chr8 (298-334)||(19703485-19703521)
chr8 (295-335)||(22193359-22193399)
chr8 (296-335)||(6536561-6536600)
chr8 (300-335)||(11819817-11819852)
chr8 (298-329)||(18546360-18546391)
chr8 (296-335)||(23361645-23361684)
chr8 (300-335)||(27750771-27750806)
chr8 (297-335)||(11492070-11492108)
chr8 (297-335)||(29431052-29431090)
chr8 (296-334)||(31408118-31408156)
chr8 (297-334)||(3826774-3826811)
chr8 (296-333)||(8794341-8794378)
chr8 (298-335)||(28783101-28783138)
chr8 (300-333)||(33727873-33727906)
chr8 (296-329)||(35690060-35690093)
chr8 (298-335)||(36205236-36205273)
chr8 (295-335)||(3721152-3721192)
chr8 (296-332)||(7140753-7140789)
chr8 (295-335)||(16843789-16843829)
chr8 (299-335)||(21566781-21566817)
chr8 (294-334)||(28540464-28540504)
chr8 (295-335)||(35287757-35287797)
[»] scaffold0299 (1 HSPs)
scaffold0299 (296-335)||(11569-11608)
[»] scaffold0258 (1 HSPs)
scaffold0258 (296-335)||(15319-15358)
[»] chr5 (24 HSPs)
chr5 (296-335)||(16773848-16773887)
chr5 (296-335)||(14285202-14285241)
chr5 (296-335)||(25627098-25627137)
chr5 (296-335)||(43442237-43442276)
chr5 (295-335)||(14495800-14495840)
chr5 (291-335)||(25979211-25979255)
chr5 (298-334)||(35360084-35360120)
chr5 (296-335)||(8779306-8779345)
chr5 (296-335)||(29075822-29075861)
chr5 (296-335)||(29173531-29173570)
chr5 (300-335)||(30109308-30109343)
chr5 (296-335)||(34984847-34984886)
chr5 (296-335)||(37258362-37258401)
chr5 (297-335)||(1410657-1410694)
chr5 (298-335)||(84865-84902)
chr5 (298-335)||(3315256-3315293)
chr5 (306-335)||(4793094-4793123)
chr5 (301-330)||(5390853-5390882)
chr5 (290-335)||(9842836-9842881)
chr5 (298-327)||(17675759-17675788)
chr5 (296-333)||(27841015-27841052)
chr5 (295-335)||(12883881-12883921)
chr5 (295-335)||(22020857-22020897)
chr5 (295-335)||(39327085-39327125)
[»] chr1 (38 HSPs)
chr1 (295-334)||(12587312-12587351)
chr1 (296-335)||(2799903-2799942)
chr1 (296-335)||(3265965-3266004)
chr1 (296-335)||(33700769-33700808)
chr1 (295-334)||(51814536-51814575)
chr1 (295-333)||(2220015-2220053)
chr1 (297-335)||(15786317-15786355)
chr1 (297-334)||(7219915-7219952)
chr1 (295-335)||(12370204-12370244)
chr1 (295-335)||(16893435-16893475)
chr1 (295-335)||(17439958-17439998)
chr1 (296-332)||(17745252-17745288)
chr1 (298-334)||(19528325-19528361)
chr1 (299-335)||(38947471-38947507)
chr1 (296-335)||(1247154-1247193)
chr1 (296-335)||(4566589-4566628)
chr1 (300-335)||(6122835-6122870)
chr1 (296-335)||(8177178-8177217)
chr1 (296-335)||(21547476-21547515)
chr1 (295-334)||(26232356-26232395)
chr1 (296-335)||(36371511-36371550)
chr1 (296-334)||(8904456-8904494)
chr1 (299-333)||(9117162-9117196)
chr1 (297-335)||(31383795-31383833)
chr1 (296-334)||(44961807-44961845)
chr1 (295-333)||(51281394-51281432)
chr1 (298-335)||(12259301-12259338)
chr1 (296-333)||(12662325-12662362)
chr1 (298-335)||(24047100-24047137)
chr1 (298-335)||(43446004-43446041)
chr1 (298-335)||(45266875-45266912)
chr1 (296-333)||(50901625-50901662)
chr1 (298-335)||(52029935-52029972)
chr1 (295-335)||(19940867-19940907)
chr1 (302-334)||(21392879-21392911)
chr1 (298-334)||(25297814-25297850)
chr1 (299-335)||(40257440-40257476)
chr1 (295-335)||(42949287-42949327)
[»] chr7 (40 HSPs)
chr7 (298-335)||(20335829-20335866)
chr7 (295-335)||(7309397-7309437)
chr7 (291-335)||(43215225-43215269)
chr7 (296-335)||(26459406-26459445)
chr7 (295-334)||(45709703-45709742)
chr7 (295-333)||(5668566-5668604)
chr7 (296-333)||(17041008-17041045)
chr7 (298-335)||(22760904-22760941)
chr7 (295-335)||(2446349-2446389)
chr7 (295-335)||(3174968-3175008)
chr7 (294-334)||(22035440-22035480)
chr7 (298-334)||(29916806-29916842)
chr7 (296-335)||(2882991-2883030)
chr7 (296-335)||(9871282-9871321)
chr7 (296-335)||(13106778-13106817)
chr7 (295-334)||(14058295-14058334)
chr7 (295-334)||(14368323-14368362)
chr7 (296-335)||(15137594-15137633)
chr7 (296-335)||(18363737-18363776)
chr7 (296-331)||(21558173-21558208)
chr7 (296-335)||(23552159-23552198)
chr7 (296-335)||(41519260-41519299)
chr7 (296-334)||(2962501-2962539)
chr7 (296-334)||(11700207-11700245)
chr7 (301-335)||(25590652-25590686)
chr7 (297-335)||(29385740-29385778)
chr7 (301-335)||(31835233-31835267)
chr7 (301-335)||(48771979-48772013)
chr7 (298-335)||(18056773-18056810)
chr7 (298-335)||(37085547-37085584)
chr7 (298-335)||(37473655-37473692)
chr7 (298-335)||(42711999-42712036)
chr7 (298-335)||(43590948-43590985)
chr7 (298-334)||(7499922-7499958)
chr7 (299-335)||(8108622-8108658)
chr7 (297-333)||(30217922-30217958)
chr7 (299-331)||(30301925-30301957)
chr7 (298-334)||(38374597-38374633)
chr7 (296-328)||(39631892-39631924)
chr7 (298-334)||(49050489-49050525)
[»] chr4 (32 HSPs)
chr4 (298-335)||(30938217-30938254)
chr4 (298-335)||(39509111-39509148)
chr4 (295-335)||(49576889-49576929)
chr4 (296-335)||(7949450-7949489)
chr4 (296-335)||(23377997-23378036)
chr4 (296-335)||(37109347-37109386)
chr4 (298-331)||(19229206-19229239)
chr4 (298-335)||(19238575-19238612)
chr4 (298-335)||(46295138-46295175)
chr4 (298-334)||(47044759-47044795)
chr4 (295-335)||(51948521-51948561)
chr4 (296-335)||(2622391-2622430)
chr4 (296-335)||(4249218-4249257)
chr4 (296-335)||(7292794-7292833)
chr4 (296-335)||(12798725-12798764)
chr4 (296-335)||(13015468-13015507)
chr4 (296-335)||(28635737-28635776)
chr4 (296-335)||(37274455-37274494)
chr4 (300-335)||(38869809-38869844)
chr4 (296-335)||(51622526-51622565)
chr4 (297-335)||(43623441-43623479)
chr4 (298-335)||(9936959-9936996)
chr4 (298-335)||(32992653-32992690)
chr4 (298-335)||(55427198-55427235)
chr4 (295-335)||(2185027-2185067)
chr4 (298-334)||(15729524-15729560)
chr4 (295-335)||(17618322-17618362)
chr4 (299-335)||(31759657-31759693)
chr4 (295-335)||(38838838-38838878)
chr4 (299-335)||(41346962-41346998)
chr4 (299-335)||(46329205-46329241)
chr4 (295-335)||(51954155-51954195)
[»] chr2 (27 HSPs)
chr2 (298-335)||(39715033-39715070)
chr2 (295-333)||(4262297-4262335)
chr2 (296-334)||(33582015-33582053)
chr2 (297-335)||(42327392-42327430)
chr2 (298-335)||(29503312-29503349)
chr2 (296-333)||(33569854-33569891)
chr2 (295-335)||(7799030-7799070)
chr2 (298-334)||(21939121-21939157)
chr2 (295-335)||(25637192-25637232)
chr2 (298-334)||(37480117-37480153)
chr2 (296-335)||(13803536-13803575)
chr2 (296-335)||(14500318-14500357)
chr2 (300-335)||(21195676-21195711)
chr2 (299-334)||(32687523-32687558)
chr2 (300-335)||(42860389-42860424)
chr2 (296-334)||(3661004-3661042)
chr2 (296-334)||(19244151-19244189)
chr2 (301-335)||(28846732-28846766)
chr2 (297-334)||(7599978-7600015)
chr2 (296-333)||(11251130-11251167)
chr2 (298-335)||(19016072-19016109)
chr2 (298-335)||(21213810-21213847)
chr2 (298-335)||(23052521-23052558)
chr2 (297-334)||(31573638-31573675)
chr2 (296-332)||(13519048-13519084)
chr2 (299-335)||(33839259-33839295)
chr2 (296-335)||(42922455-42922495)
[»] scaffold0194 (1 HSPs)
scaffold0194 (295-335)||(13041-13081)
[»] scaffold0291 (1 HSPs)
scaffold0291 (298-335)||(2468-2505)
[»] scaffold1367 (1 HSPs)
scaffold1367 (296-331)||(836-871)
[»] scaffold0238 (1 HSPs)
scaffold0238 (296-335)||(2707-2746)
[»] scaffold0180 (1 HSPs)
scaffold0180 (296-335)||(19958-19997)
[»] scaffold0008 (1 HSPs)
scaffold0008 (295-334)||(49348-49387)
[»] scaffold0118 (1 HSPs)
scaffold0118 (296-334)||(41629-41667)
[»] scaffold0368 (1 HSPs)
scaffold0368 (295-335)||(14960-15000)


Alignment Details
Target: chr6 (Bit Score: 283; Significance: 1e-158; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 4 - 335
Target Start/End: Complemental strand, 19163165 - 19162824
Alignment:
Q  4 gatggacatcatcaataaagcaaagatgttatctggtagctcctgcattcacataattaaagcaaatataagtataaaaaattcttaaaatcgacgcttg 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19163165 gatggacatcatcaataaagcaaagacgttatctggtagctcctgcattcacataattaaagcaaatataagtataaaaaattcttaaaatcgatgcttg 19163066  T
Q  104 aaaatcgcttactgttgagtttgtgatcttatcagtattgaatcaacaaaaacatgagaaaagaaataccagttcagttttgaagaatttatatttgttt 203  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19163065 aaaatagcttactgttgagtttgtgatcttatcggtattgaatcaacaaaaacatgagaaaagaaataccagttgagttttgaagaatttatatttgttt 19162966  T
Q  204 cgttgttttttaacaa----------attgagtcatcctttcagtcgtcacgatgagtaagactgtgatattcttttagaaactaaattagcccactcat 293  Q
    ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19162965 cgttgttttttaacaaaccgacactgattgagtcatcctttcagtcgtcacgatgagtaagactgtgatattcttttagaaactaaattagcccactcat 19162866  T
Q  294 aggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  19162865 aggagagaatcgaacctgagatctcgaggaggagcacactcc 19162824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 33549184 - 33549145
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcc 33549145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 9626113 - 9626073
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  9626113 ggagagaatcgaacatgagacctcgaggaggagcatactcc 9626073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 12234502 - 12234542
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  12234502 ggagagaatcgaacctgagacctcgagagggagcacactcc 12234542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 13227149 - 13227193
Alignment:
Q  291 cataggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||    
T  13227149 catatgagagaatcgaacttgagacttcgaggaggagcacactcc 13227193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 28841495 - 28841455
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  28841495 ggagagaatcgaacttgagaccttgaggaggagcacactcc 28841455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 30127477 - 30127441
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| ||||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcc 30127441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 10338174 - 10338209
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| |||||||||||||||||    
T  10338174 gaatcgaacctgagaccttgaggaggagcacactcc 10338209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 331
Target Start/End: Complemental strand, 12216823 - 12216789
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcaca 331  Q
    ||||||||||||||||||||||||| |||||||||    
T  12216823 agagaatcgaacctgagacctcgagaaggagcaca 12216789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 23910108 - 23910146
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  23910108 agagattcgaacctgagaccttgaggaggagcacactcc 23910146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 346608 - 346571
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  346608 gagaatcgaacatgagacctcgaggagaagcacactcc 346571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Complemental strand, 13661590 - 13661561
Alignment:
Q  306 aacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||    
T  13661590 aacctgagacctcgaggaggagcacactcc 13661561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 16405163 - 16405126
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  16405163 gagaatcgaaactgagacctcgaggagaagcacactcc 16405126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 24641188 - 24641225
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  24641188 gagaatcgaaccttaaacctcgaggaggagcacactcc 24641225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Original strand, 31622997 - 31623026
Alignment:
Q  306 aacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcc 31623026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 331
Target Start/End: Complemental strand, 6385943 - 6385907
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcaca 331  Q
    |||||||||||||||||||||||  ||||||||||||    
T  6385943 ggagagaatcgaacctgagaccttaaggaggagcaca 6385907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 6691546 - 6691585
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  6691546 ggagagaatcgaacctgagaccttga-gaggagcacactcc 6691585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 11423647 - 11423607
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| |||||||||||||||||||||||| |||| |||||    
T  11423647 ggagaaaatcgaacctgagacctcgaggagaagcatactcc 11423607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 12633090 - 12633050
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| ||||| ||||| ||||||||||||||    
T  12633090 ggagagaatcgaacatgagatctcgaagaggagcacactcc 12633050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 34444881 - 34444845
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||| | ||||||||||||||    
T  34444881 gagaatcgaacctgagaccttggggaggagcacactc 34444845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 21960650 - 21960593
Alignment:
Q  277 taaattagcccactcataggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||| || | |||||||||||| ||||||||||||||||||||||||||    
T  21960650 taaattagcccacccaaatgagagaatcgaatctgagacctcgaggaggagcacactc 21960593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 10445135 - 10445174
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10445135 gagagaatcgaacctgagacctcgaggaggagcacactcc 10445174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 47454615 - 47454652
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactcc 47454652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 4844506 - 4844546
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  4844506 ggagagaatcgatcctgagacctcgaggaggagcacactcc 4844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 4870202 - 4870242
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  4870202 ggagagaatcgatcctgagacctcgaggaggagcacactcc 4870242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 14186728 - 14186688
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  14186728 ggagagaatcgaacctgagaccttgaggaggagcacactcc 14186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 44743850 - 44743890
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  44743850 ggagataatcgaacctgagacctcgaggaggagcacactcc 44743890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 51903873 - 51903913
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  51903873 ggagagaatcgaacctgagaccacgaggaggagcacactcc 51903913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 36720461 - 36720422
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  36720461 gagagaatcgaacctgaaacctcgaggaggagcacactcc 36720422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 37788461 - 37788500
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  37788461 gagagaatcgaacctgagaccttgaggaggagcacactcc 37788500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 30311385 - 30311347
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcc 30311347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 33899693 - 33899655
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  33899693 agagaatcgaacctgagacctagaggaggagcacactcc 33899655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 52769980 - 52770018
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  52769980 agagaatcgaacctgagacctcaaggaggagcacactcc 52770018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 2597211 - 2597255
Alignment:
Q  291 cataggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||    
T  2597211 catagtagagattcgaacctgagacctcaaggaggagcacactcc 2597255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 31520600 - 31520640
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  31520600 ggagagaatcaaacctaagacctcgaggaggagcacactcc 31520640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 2667942 - 2667903
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  2667942 gagataatcgaacctgagacctcgaggaagagcacactcc 2667903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 3427549 - 3427588
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  3427549 gagagaatcgaatctgagaccttgaggaggagcacactcc 3427588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 20501777 - 20501738
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  20501777 ggagagaatcgaacctgagaccttaaggaggagcacactc 20501738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 27093357 - 27093396
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  27093357 gagagaatcaaacctgagaccttgaggaggagcacactcc 27093396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 27259241 - 27259202
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  27259241 gagagaatcaaacctgaaacctcgaggaggagcacactcc 27259202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 28703400 - 28703439
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  28703400 gagagaatcgaacctgagaccttgaagaggagcacactcc 28703439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 30510195 - 30510234
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  30510195 gagagaatcgaacctgagacctcgagaaggagcatactcc 30510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 31608520 - 31608559
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  31608520 gagagaatcaaatctgagacctcgaggaggagcacactcc 31608559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 39253777 - 39253738
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  39253777 gagagaatcgaacctgagaccttgaagaggagcacactcc 39253738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 53413025 - 53412986
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  53413025 gagagaattgaacctgagaccttgaggaggagcacactcc 53412986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 16354888 - 16354926
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  16354888 gagagaatcgaacctgagaccctgaggaggagcacactc 16354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 45229309 - 45229275
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||| ||||||||||||||||||    
T  45229309 aatcgaacctgagaccacgaggaggagcacactcc 45229275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 13808881 - 13808918
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  13808881 gagagaattgaacctgagacctagaggaggagcacact 13808918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 14339688 - 14339651
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| | |||||||||||||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactcc 14339651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 17108896 - 17108933
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  17108896 gagaatcaaacctgagaccttgaggaggagcacactcc 17108933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 19154710 - 19154673
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||  |||||||||||||||    
T  19154710 agagaatcgaacctgagacctttaggaggagcacactc 19154673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 19716275 - 19716238
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  19716275 gagaatcgaaccagagaccttgaggaggagcacactcc 19716238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 29563980 - 29563943
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  29563980 gagagaatcgaacctgagacttcgaggagaagcacact 29563943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 33861732 - 33861769
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  33861732 gagaatcgaacattagacctcgaggaggagcacactcc 33861769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 45308903 - 45308936
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||||||||| ||||    
T  45308903 aatcgaacctgagacctcgaggaggagcatactc 45308936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 49494144 - 49494181
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  49494144 gagaatcaaacctgagacctcgaggaagagcacactcc 49494181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 54990780 - 54990743
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctcc 54990743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 9557394 - 9557362
Alignment:
Q  302 atcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||| |||||||||||||||||||    
T  9557394 atcgaacctgagatctcgaggaggagcacactc 9557362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 10499104 - 10499144
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||||| |||| ||||| |||||    
T  10499104 ggagagaatcgaacctgagacctcaaggaagagcagactcc 10499144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 30715823 - 30715783
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| || | |||||||||||||||||    
T  30715823 ggagagaatcgaacctgaaacattgaggaggagcacactcc 30715783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 44069835 - 44069799
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||| |||||||||||| |||||||||||||||||    
T  44069835 agaatcaaacctgagaccttgaggaggagcacactcc 44069799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 968443 - 968403
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  968443 ggagagaatcgaacctgagacctcgaggaggagcacactcc 968403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 16852418 - 16852381
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcc 16852381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 35641896 - 35641936
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  35641896 ggagagaatcgaacctgagacatcgaggaggagcacactcc 35641936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 29858049 - 29858084
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactcc 29858084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 333
Target Start/End: Original strand, 11928730 - 11928764
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||||||||||||||||||    
T  11928730 agaatcgaacctgagacctcgaggaggagcacact 11928764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 33017294 - 33017257
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||||| |||||||||||||||    
T  33017294 gagagaatcgaacctgagaccttgaggaggagcacact 33017257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 3624661 - 3624621
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  3624661 ggagagaatcgaacctgagaccttgaagaggagcacactcc 3624621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 19703485 - 19703521
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactc 19703521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 22193359 - 22193399
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  22193359 ggagagaatcgaacctaagaccttgaggaggagcacactcc 22193399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 6536600 - 6536561
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  6536600 gagagaattgaacctgagaccttgaggaggagcacactcc 6536561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 11819852 - 11819817
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| |||||||||||||||||    
T  11819852 gaatcgaacctgagaccttgaggaggagcacactcc 11819817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 298 - 329
Target Start/End: Original strand, 18546360 - 18546391
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagca 329  Q
    ||||||||||||||||||||||||||||||||    
T  18546360 gagaatcgaacctgagacctcgaggaggagca 18546391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 23361645 - 23361684
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  23361645 gagagaattgaacctgagaccttgaggaggagcacactcc 23361684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 27750806 - 27750771
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| |||||||||||||||||    
T  27750806 gaatcgaacctgagaccttgaggaggagcacactcc 27750771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 11492070 - 11492108
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  11492070 agagaatcgaacctaagacctcgagaaggagcacactcc 11492108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 29431090 - 29431052
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  29431090 agagaatcgaacctgaggcctcaaggaggagcacactcc 29431052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 31408118 - 31408156
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  31408118 gagagaatcgaacctgaaaccttgaggaggagcacactc 31408156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 3826774 - 3826811
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  3826774 agagaatcgaacctgagatctcgtggaggagcacactc 3826811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 8794341 - 8794378
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||||  |||||||||||||||    
T  8794341 gagagaatcgaacctgagaccctgaggaggagcacact 8794378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 28783138 - 28783101
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  28783138 gagaatcgaacatgagaccttgaggaggagcacactcc 28783101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 33727873 - 33727906
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||| |||||||||||||||    
T  33727873 gaatcgaacctgagaccttgaggaggagcacact 33727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 329
Target Start/End: Original strand, 35690060 - 35690093
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagca 329  Q
    |||||||||||||||||||||| |||||||||||    
T  35690060 gagagaatcgaacctgagaccttgaggaggagca 35690093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 36205273 - 36205236
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  36205273 gagaatcgaacatgagaccttgaggaggagcacactcc 36205236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 3721152 - 3721192
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| |||||||||||| || |||||||||||||||||||    
T  3721152 ggagaaaatcgaacctgaaacatcgaggaggagcacactcc 3721192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Complemental strand, 7140789 - 7140753
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacac 332  Q
    |||||||||||| |||||| |||||||||||||||||    
T  7140789 gagagaatcgaatctgagagctcgaggaggagcacac 7140753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 16843789 - 16843829
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| || | |||||||||||||||    
T  16843789 ggagagaatcgaacctgagatcttgcggaggagcacactcc 16843829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 21566781 - 21566817
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  21566781 agaatcgaacctgagaccttgagtaggagcacactcc 21566817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 28540504 - 28540464
Alignment:
Q  294 aggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||| ||||||||||||| ||| ||||||||||||    
T  28540504 aggagagaattgaacctgagacctagagaaggagcacactc 28540464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 35287797 - 35287757
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| ||| |||| |||||||||||||||||    
T  35287797 ggagagaatcgaacatgataccttgaggaggagcacactcc 35287757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 11608 - 11569
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11608 gagagaatcgaacctgagacctcgaggaggagcacactcc 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 15319 - 15358
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcc 15358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 16773887 - 16773848
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16773887 gagagaatcgaacctgagacctcgaggaggagcacactcc 16773848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 14285241 - 14285202
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  14285241 gagagaatcgaacctgagaccttgaggaggagcacactcc 14285202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 25627137 - 25627098
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  25627137 gagagaatcgaacctgagaccttgaggaggagcacactcc 25627098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 43442276 - 43442237
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  43442276 gagagaatcgaacctgagaccttgaggaggagcacactcc 43442237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 14495800 - 14495840
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  14495800 ggagagaatcaaatctgagacctcgaggaggagcacactcc 14495840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 25979255 - 25979211
Alignment:
Q  291 cataggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| |||||||||||||||||||||| ||||||||| |||||||    
T  25979255 cataagagagaatcgaacctgagaccttgaggaggagaacactcc 25979211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 35360084 - 35360120
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||||||| |||||||||    
T  35360084 gagaatcgaacctgagacctcgaggagaagcacactc 35360120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 8779306 - 8779345
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  8779306 gagataatcgaacctgaaacctcgaggaggagcacactcc 8779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 29075861 - 29075822
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  29075861 gagagaatcgaacatgagatctcgaggaggagcacactcc 29075822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 29173570 - 29173531
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  29173570 gagataatcgaacctgaaacctcgaggaggagcacactcc 29173531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 30109308 - 30109343
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30109308 gaatcgaacctgagacctcaaggaggagcacactcc 30109343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 34984886 - 34984847
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  34984886 gagagaatcgaacctaagaccttgaggaggagcacactcc 34984847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 37258362 - 37258401
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  37258362 gagagaatcgaacctgaaaccttgaggaggagcacactcc 37258401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 1410657 - 1410694
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  1410657 agagaatcgaac-tgagacctcgaggaggagcacactcc 1410694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 84902 - 84865
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  84902 gagaatcgaacttgagaccttgaggaggagcacactcc 84865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 3315293 - 3315256
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  3315293 gagaatcgaacctgagaccttgaggaggagcgcactcc 3315256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Original strand, 4793094 - 4793123
Alignment:
Q  306 aacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||    
T  4793094 aacctgagacctcgaggaggagcacactcc 4793123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Original strand, 5390853 - 5390882
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcac 330  Q
    ||||||||||||||||||||||||||||||    
T  5390853 aatcgaacctgagacctcgaggaggagcac 5390882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 9842836 - 9842881
Alignment:
Q  290 tcataggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| ||||||| | ||||| |||||||||||||||||||||||||    
T  9842836 tcatcggagagatttgaacccgagacctcgaggaggagcacactcc 9842881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 327
Target Start/End: Original strand, 17675759 - 17675788
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggag 327  Q
    ||||||||||||||||||||||||||||||    
T  17675759 gagaatcgaacctgagacctcgaggaggag 17675788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 27841015 - 27841052
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  27841015 gagagaatcgaaccggagatctcgaggaggagcacact 27841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 12883921 - 12883881
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| |||| ||||||||| ||||||||||||||||    
T  12883921 ggagagaattgaacatgagacctcaaggaggagcacactcc 12883881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 22020857 - 22020897
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||| ||||||| || ||||||||||||||||    
T  22020857 ggagagaatcgaatctgagacttcaaggaggagcacactcc 22020897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 39327085 - 39327125
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||| || |||||| |||||||||||||||||    
T  39327085 ggagagaatcgaagctaagaccttgaggaggagcacactcc 39327125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 12587351 - 12587312
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12587351 ggagagaatcgaacctgagacctcgaggaggagcacactc 12587312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 2799942 - 2799903
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  2799942 gagagaatcgaacctgagaccttgaggaggagcacactcc 2799903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 3266004 - 3265965
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  3266004 gagagaatcgaacctgagaccttgaggaggagcacactcc 3265965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 33700769 - 33700808
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  33700769 gagagaatcgaacctgagaccttgaggaggagcacactcc 33700808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 51814575 - 51814536
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  51814575 ggagagaatcgaacctgagaccttgaggaggagcacactc 51814536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 2220053 - 2220015
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  2220053 ggagagaatcgaacctgagacctcgaggagaagcacact 2220015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 15786317 - 15786355
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcc 15786355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 7219915 - 7219952
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  7219915 agagaatcgaacctgagacttcgaggaggagcacactc 7219952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 12370244 - 12370204
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  12370244 ggagagaatcaaacatgagacctcgaggaggagcacactcc 12370204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 16893475 - 16893435
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  16893475 ggagaaaatcgaacctgagacctcgaggaggagtacactcc 16893435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 17439998 - 17439958
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  17439998 ggagagaatcaaacatgagacctcgaggaggagcacactcc 17439958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 17745252 - 17745288
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacac 332  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17745252 gagagaatcgaacatgagacctcgaggaggagcacac 17745288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 19528325 - 19528361
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactc 19528361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 38947471 - 38947507
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||| |||||||||||||||||    
T  38947471 agaatcgaacctgagaccttgaggaggagcacactcc 38947507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 1247193 - 1247154
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  1247193 gagagaatcgaacctgagaccttgaggaggagtacactcc 1247154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 4566628 - 4566589
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  4566628 gagagaatcgaacctgagaccctgaggaggagcacactcc 4566589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 6122870 - 6122835
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| |||||||||||||||||    
T  6122870 gaatcgaacctgagaccttgaggaggagcacactcc 6122835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 8177178 - 8177217
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  8177178 gagagaatcgaacctgaaaccttgaggaggagcacactcc 8177217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 21547476 - 21547515
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  21547476 gagagaatcgaacctgaaacctcgaggaggagcaccctcc 21547515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 26232356 - 26232395
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  26232356 ggagagaattgaacctgagacctcaaggaggagcacactc 26232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 36371550 - 36371511
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  36371550 gagagaatcgaacctcagaccttgaggaggagcacactcc 36371511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 8904494 - 8904456
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  8904494 gagagaatcgaacttgagaccttgaggaggagcacactc 8904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 9117196 - 9117162
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||| ||||||||||||||    
T  9117196 agaatcgaacctgagacctcaaggaggagcacact 9117162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 31383795 - 31383833
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  31383795 agagaatcgaacctgagaccccaaggaggagcacactcc 31383833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 44961845 - 44961807
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  44961845 gagagaatcgaacctgagaccctgaggaggagcacactc 44961807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Complemental strand, 51281432 - 51281394
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  51281432 ggagagaatcaaacctgagaccttgaggaggagcacact 51281394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 12259338 - 12259301
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  12259338 gagaatcgaacttgagacttcgaggaggagcacactcc 12259301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 12662362 - 12662325
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  12662362 gagataatcgaacctgagacatcgaggaggagcacact 12662325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 24047100 - 24047137
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  24047100 gagaatcgaacttgaaacctcgaggaggagcacactcc 24047137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 43446041 - 43446004
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  43446041 gagaatcgaacatgagaccttgaggaggagcacactcc 43446004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 45266912 - 45266875
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  45266912 gagaatcgaacctgagaccttgaggaggagcaaactcc 45266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 50901662 - 50901625
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacact 50901625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 52029935 - 52029972
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  52029935 gagaatcgaacctgagaccttgagaaggagcacactcc 52029972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 19940867 - 19940907
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||| ||||||||||||  ||||||||||||||||    
T  19940867 ggagagaatcaaacctgagaccttaaggaggagcacactcc 19940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 21392911 - 21392879
Alignment:
Q  302 atcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||| ||||||||||||||||    
T  21392911 atcgaacctgagaccttgaggaggagcacactc 21392879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 25297850 - 25297814
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  25297850 gagaatcaaacctcagacctcgaggaggagcacactc 25297814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 40257476 - 40257440
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcc 40257440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 42949287 - 42949327
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  42949287 ggagagaatcaaatatgagacctcgaggaggagcacactcc 42949327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 20335829 - 20335866
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcc 20335866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 7309437 - 7309397
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  7309437 ggagagaatcgaacttgagacctcgaggaggagcacactcc 7309397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Complemental strand, 43215269 - 43215225
Alignment:
Q  291 cataggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| |||||||||||||||||||||| |||||||||||||||||    
T  43215269 cataagagagaatcgaacctgagaccttgaggaggagcacactcc 43215225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 26459406 - 26459445
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  26459406 gagagaatcgaacctgagaccttgaggaggagcacactcc 26459445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 45709703 - 45709742
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  45709703 ggagataatcgaacctgagacctcgaggaggagcacactc 45709742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 5668566 - 5668604
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  5668566 ggagagaatcgatcctgagacctcgaggaggagcacact 5668604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 17041008 - 17041045
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||||| |||||||||||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacact 17041045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 22760941 - 22760904
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| |||||||||||||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcc 22760904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 2446389 - 2446349
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  2446389 ggagagaatcgaacttgagatctcgaggaggagcacactcc 2446349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 3175008 - 3174968
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  3175008 ggagagaatcgaacctgagacctcgagatggagcacactcc 3174968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 22035480 - 22035440
Alignment:
Q  294 aggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  22035480 aggagagaatcgaacctgggtcctcgaggaggagcacactc 22035440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 29916806 - 29916842
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29916806 gagaatcgaacctgagaccttgaggaggagcacactc 29916842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 2883030 - 2882991
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  2883030 gagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 9871282 - 9871321
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  9871282 gagagaatcgaatctgagacttcgaggaggagcacactcc 9871321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 13106778 - 13106817
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  13106778 gagagaatcgaacctgagaccttgaggaggagtacactcc 13106817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 14058334 - 14058295
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  14058334 ggagagaatcgaacctgagaccttgaggatgagcacactc 14058295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 14368362 - 14368323
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  14368362 ggagagaatcgaacctgagaccttgaggatgagcacactc 14368323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 15137633 - 15137594
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  15137633 gagagaatctaacctgagaccttgaggaggagcacactcc 15137594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 18363776 - 18363737
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  18363776 gagagaatcaaacctgagaccttgaggaggagcacactcc 18363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Complemental strand, 21558208 - 21558173
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcaca 331  Q
    |||||||||||||||||||||| |||||||||||||    
T  21558208 gagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 23552198 - 23552159
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  23552198 gagagaatcgaacttgagaccttgaggaggagcacactcc 23552159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 41519260 - 41519299
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  41519260 gagagaagcgaacctgagaccttgaggaggagcacactcc 41519299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 2962539 - 2962501
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  2962539 gagagaatcgaacctgagatcttgaggaggagcacactc 2962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 11700245 - 11700207
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  11700245 gagagaatcgaacctgagaccttgaggaggagcaaactc 11700207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 25590686 - 25590652
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| |||||||||||||||||||||||||    
T  25590686 aatcgaacccgagacctcgaggaggagcacactcc 25590652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 29385740 - 29385778
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcacactcc 29385778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 31835267 - 31835233
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| |||||||||||||||||    
T  31835267 aatcgaacctgagaccttgaggaggagcacactcc 31835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 48772013 - 48771979
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| ||||||||||||||||    
T  48772013 aatcgaacctgagacctcaaggaggagcacactcc 48771979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 18056773 - 18056810
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  18056773 gagaatcgaacctgagaccttcaggaggagcacactcc 18056810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 37085547 - 37085584
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  37085547 gagaatcgaacctgaaacctcgaggatgagcacactcc 37085584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 37473692 - 37473655
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  37473692 gagaatcgaacctgagacctcaaggaggagcaaactcc 37473655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 42712036 - 42711999
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  42712036 gagaatcgaacatgagaccttgaggaggagcacactcc 42711999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 43590985 - 43590948
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| | |||||||||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcc 43590948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 7499922 - 7499958
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  7499922 gagaatcgaacctgagacctcgaagaggagcaaactc 7499958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 8108658 - 8108622
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  8108658 agaatcgaacctgagacctcaaggaggagcgcactcc 8108622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 30217958 - 30217922
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||| |||||||| |||||||||||||||    
T  30217958 agagaatcgaacttgagaccttgaggaggagcacact 30217922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 331
Target Start/End: Complemental strand, 30301957 - 30301925
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcaca 331  Q
    ||||||||||||||||||| |||||||||||||    
T  30301957 agaatcgaacctgagaccttgaggaggagcaca 30301925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 38374597 - 38374633
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactc 38374633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 328
Target Start/End: Complemental strand, 39631924 - 39631892
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagc 328  Q
    |||||||||||||||||||||| ||||||||||    
T  39631924 gagagaatcgaacctgagaccttgaggaggagc 39631892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 49050489 - 49050525
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  49050489 gagaatcgaacctgagacctcaaggaggagtacactc 49050525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 30938217 - 30938254
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactcc 30938254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 39509148 - 39509111
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcc 39509111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 49576889 - 49576929
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  49576889 ggagagaatcgaacctgagaccttgaggaggagcacactcc 49576929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 7949450 - 7949489
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  7949450 gagagaatcgaacctgagaccttgaggaggagcacactcc 7949489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 23378036 - 23377997
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  23378036 gagagaatcgaacctgagaccttgaggaggagcacactcc 23377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 37109347 - 37109386
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  37109347 gagagaatcgaacctgagaccttgaggaggagcacactcc 37109386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 331
Target Start/End: Original strand, 19229206 - 19229239
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcaca 331  Q
    ||||||||||||||||||||||||||||||||||    
T  19229206 gagaatcgaacctgagacctcgaggaggagcaca 19229239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 19238575 - 19238612
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||| |||||||||||||||||||||||||    
T  19238575 gagaatcgaacccgagacctcgaggaggagcacactcc 19238612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 46295175 - 46295138
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| |||||||||||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactcc 46295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 47044795 - 47044759
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||||||||||||| ||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactc 47044759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 51948561 - 51948521
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  51948561 ggagagaattgaacctgagacctcgaggaggggcacactcc 51948521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 2622391 - 2622430
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  2622391 gagagaatcgaacctgagacatggaggaggagcacactcc 2622430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 4249257 - 4249218
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| |||||||||||| |||||||||||||||||    
T  4249257 gagagaatcaaacctgagaccttgaggaggagcacactcc 4249218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 7292794 - 7292833
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  7292794 gagagaatcgaacctgagactttgaggaggagcacactcc 7292833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 12798764 - 12798725
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  12798764 gagagaatcgaacctgaaacctcgaggagcagcacactcc 12798725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 13015507 - 13015468
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  13015507 gagagaatcgaacatgagacttcgaggaggagcacactcc 13015468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 28635776 - 28635737
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  28635776 gagagaatcgaacctaagacctccaggaggagcacactcc 28635737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 37274455 - 37274494
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  37274455 gagagaatcgaacctaagaccttgaggaggagcacactcc 37274494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 38869844 - 38869809
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| |||||||||||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactcc 38869809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 51622565 - 51622526
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||| ||||||||||||||| |||||||||||||||||    
T  51622565 gagagagtcgaacctgagaccttgaggaggagcacactcc 51622526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 43623441 - 43623479
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  43623441 agagaatcgaacctgagacttcaaggaggagcacactcc 43623479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 9936959 - 9936996
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||| || |||||||||||||||||||    
T  9936959 gagaatcgaacctgaaacttcgaggaggagcacactcc 9936996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 32992690 - 32992653
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  32992690 gagaatcgaacttgagaccttgaggaggagcacactcc 32992653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 55427198 - 55427235
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcc 55427235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 2185027 - 2185067
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| | ||| |||||||||||||    
T  2185027 ggagagaatcgaacctgagactttgagaaggagcacactcc 2185067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 15729560 - 15729524
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  15729560 gagaatcgaacttgagacatcgaggaggagcacactc 15729524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 17618362 - 17618322
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| ||| ||||| ||||||||||||||||||||||||||    
T  17618362 ggagggaaacgaacatgagacctcgaggaggagcacactcc 17618322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 31759657 - 31759693
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  31759657 agaatcgaatctgagaccttgaggaggagcacactcc 31759693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 38838878 - 38838838
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||| |||||| ||||||||||| |||||    
T  38838878 ggagagaatcgaacctaagaccttgaggaggagcatactcc 38838838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 41346962 - 41346998
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  41346962 agaatcgaacctgagacttcgaggaggagcatactcc 41346998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 46329241 - 46329205
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||| |||| |||||||||||||||||    
T  46329241 agaatcgaacctgataccttgaggaggagcacactcc 46329205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 51954195 - 51954155
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| |||| |||||||||||||||||||||||| |||||    
T  51954195 ggagataatcaaacctgagacctcgaggaggagcatactcc 51954155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 39715070 - 39715033
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcc 39715033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 4262297 - 4262335
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  4262297 ggagagaatcgaacctgagaccttgaggaggagcacact 4262335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 33582053 - 33582015
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  33582053 gagagaatcgaacctgagacctcaaggaggagcacactc 33582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 42327392 - 42327430
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcc 42327430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 29503349 - 29503312
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| |||||||||||||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcc 29503312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 333
Target Start/End: Original strand, 33569854 - 33569891
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    |||||||||||||||||||||||||||| |||||||||    
T  33569854 gagagaatcgaacctgagacctcgaggaagagcacact 33569891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 7799030 - 7799070
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  7799030 ggagagaatcgaatctgagatctcgaggaggagcacactcc 7799070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 21939121 - 21939157
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||| |||||||||||||||||||    
T  21939121 gagaatcgaacctgagatctcgaggaggagcacactc 21939157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 25637232 - 25637192
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||| |||||||||||||||||| |||||||||||||    
T  25637232 ggagagaaccgaacctgagacctcgagaaggagcacactcc 25637192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 37480153 - 37480117
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||| ||||||||||||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactc 37480117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 13803575 - 13803536
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  13803575 gagataatcgaacctgagaccttgaggaggagcacactcc 13803536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 14500357 - 14500318
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  14500357 gagagaatcgaatctgagacctagaggaggagcacactcc 14500318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 300 - 335
Target Start/End: Original strand, 21195676 - 21195711
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||| |||||||||||||||||    
T  21195676 gaatcgaacctgagaccttgaggaggagcacactcc 21195711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 299 - 334
Target Start/End: Complemental strand, 32687558 - 32687523
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||||||||| |||||||    
T  32687558 agaatcgaacctgagacctcgaggaggaacacactc 32687523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 300 - 335
Target Start/End: Complemental strand, 42860424 - 42860389
Alignment:
Q  300 gaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||| ||||||||||||||||||||||||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactcc 42860389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 3661004 - 3661042
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  3661004 gagagaatcgaacctgagatctcgaggaggggcacactc 3661042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 19244189 - 19244151
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  19244189 gagagaatcgaacctgagaccttggggaggagcacactc 19244151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 28846766 - 28846732
Alignment:
Q  301 aatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||| |||||||||||||||||||    
T  28846766 aatcgaacctgagacatcgaggaggagcacactcc 28846732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 7599978 - 7600015
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  7599978 agagaatcgaacatgaaacctcgaggaggagcacactc 7600015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 11251167 - 11251130
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacact 333  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  11251167 gagagaatcaaacctgagaccttgaggaggagcacact 11251130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 19016109 - 19016072
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  19016109 gagaatcaaacttgagacctcgaggaggagcacactcc 19016072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Complemental strand, 21213847 - 21213810
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  21213847 gagaatcgaacctgagacctcaaggaggaacacactcc 21213810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 23052521 - 23052558
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcc 23052558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 31573638 - 31573675
Alignment:
Q  297 agagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    ||||||||||||||||||| || |||||||||||||||    
T  31573638 agagaatcgaacctgagacatcaaggaggagcacactc 31573675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 332
Target Start/End: Original strand, 13519048 - 13519084
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacac 332  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  13519048 gagagaatcgaacttgagacctcaaggaggagcacac 13519084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Original strand, 33839259 - 33839295
Alignment:
Q  299 agaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  33839259 agaattgaacctgagaccttgaggaggagcacactcc 33839295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 335
Target Start/End: Complemental strand, 42922495 - 42922455
Alignment:
Q  296 gagagaatcgaacctgagacc-tcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  42922495 gagagaatcgaacctgagacctttgaggaggagcacactcc 42922455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 13041 - 13081
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  13041 ggagagaatcgaacctgagaccttgaggaggagcacactcc 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 2468 - 2505
Alignment:
Q  298 gagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||| |||||||||||||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcc 2505  T

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Target: scaffold1367 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 331
Target Start/End: Original strand, 836 - 871
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcaca 331  Q
    |||||||||||||||||||| |||||||||||||||    
T  836 gagagaatcgaacctgagacttcgaggaggagcaca 871  T

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Target: scaffold0238 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 2707 - 2746
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  2707 gagagaatcgaacctgagaccttgaggaggagcagactcc 2746  T

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Target: scaffold0180 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 296 - 335
Target Start/End: Original strand, 19958 - 19997
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  19958 gagagaatcgaacctgagaccttgaggaggagcatactcc 19997  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 295 - 334
Target Start/End: Complemental strand, 49387 - 49348
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  49387 ggagagaatcgaacctgatacctcgaagaggagcacactc 49348  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 334
Target Start/End: Original strand, 41629 - 41667
Alignment:
Q  296 gagagaatcgaacctgagacctcgaggaggagcacactc 334  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  41629 gagagaattgaacctgagacctcgaggaggagcatactc 41667  T

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Target: scaffold0368 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 14960 - 15000
Alignment:
Q  295 ggagagaatcgaacctgagacctcgaggaggagcacactcc 335  Q
    |||||||||| ||  ||||||||||||||||||||||||||    
T  14960 ggagagaatcaaatatgagacctcgaggaggagcacactcc 15000  T

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