View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2568_low_32 (Length: 327)
Name: NF2568_low_32
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2568_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 3 - 308
Target Start/End: Original strand, 2651884 - 2652189
Alignment:
| Q |
3 |
tgggtagattatactgaatatcatcttactactgcatgacttctataattaattttttggaaaaacaaaggaatgcttagcatttataattttttaggaa |
102 |
Q |
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| T |
2651884 |
tgggtaggtaatattgaatatcatcttactactgcatgacttctataattaattttttggaaaaacaaaggaatgcttagcatctataattttttaggaa |
2651983 |
T |
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| Q |
103 |
aacaaagtgacaaatgtgaagtttataatgactaagccttaaattcagtttaacacagtgcatattttaacacaagtcaaatcgttattgttttacaaag |
202 |
Q |
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| T |
2651984 |
aacaaagtgacaaatgtgaagtttataatggctcagccttagattcagtttaacacagtgcatatttcaacataagtcaaatcgttattgttttacaaag |
2652083 |
T |
|
| Q |
203 |
catgttcatattttacaaaccacgtattcacattcacattgattacacgcaagttcacattttgcataacacacaattacatttcaaaacttgtacatat |
302 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
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| T |
2652084 |
catgttcatattttacaaaccacggattcacattcacattgattacacgcaagttcacattttgcataacacacaattatatttcaaaacttgtacacat |
2652183 |
T |
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| Q |
303 |
acgaca |
308 |
Q |
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|||||| |
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| T |
2652184 |
acgaca |
2652189 |
T |
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