View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2568_low_33 (Length: 323)
Name: NF2568_low_33
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2568_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 4879206 - 4878906
Alignment:
| Q |
1 |
taatcattagtatcaatttatttttatcatacacttgacaataaatttgctagcagaagtcacctattatcatagaattattcaacataacaattcatag |
100 |
Q |
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| T |
4879206 |
taatcattagtatcaatttatttttatcatacacttgacaataaatttgctagcagaagtcacctattatcatagaattattcaacataacaattcatag |
4879107 |
T |
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| Q |
101 |
ttaacatagaaataaatattttacgaaaaccaaagtnnnnnnntgtgaagccttacatagttcaacttgaaaatagaaatatggaaaccatttaatggaa |
200 |
Q |
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| T |
4879106 |
ttaacatagaaatacatattttacaaaaaccaaagtaaaaaa-tgtgaagccttacatagttcaacttgaaaatagaaatacggaaaccatttaatggaa |
4879008 |
T |
|
| Q |
201 |
gacaaataattgagtcacagtaaaccatattgttcacttgcagtaaggatatgatactctgtttaaaggttcacaaggccttccttgatttaactgagga |
300 |
Q |
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| T |
4879007 |
gacaaataattgagtcacaataaaccatattgttcacttgcagtaaggatatg---ctctgtttaaaggttcgcaaggtcttccttgatttaactgagga |
4878911 |
T |
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| Q |
301 |
ctggc |
305 |
Q |
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||||| |
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| T |
4878910 |
ctggc |
4878906 |
T |
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