View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2568_low_37 (Length: 303)
Name: NF2568_low_37
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2568_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 35690555 - 35690820
Alignment:
| Q |
18 |
gtaaccttccaatgattagggattcaatcaacaaacggagacaaaaccaccaccatcactttctgacattgaactcaatcctacacaaaggaaaaacgta |
117 |
Q |
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| T |
35690555 |
gtaaccttccaatgattagggattcaatcaacaaacggagacaaaaccaccaccatcactttctgacattgaactcaatcctacacaaaggaaaaacgta |
35690654 |
T |
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| Q |
118 |
cagttttattaattacataatttattgaaatnnnnnnngaatttttgacactgtcttcaatactaaacccttccatgcaagggtttccttaatcgttaag |
217 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35690655 |
cagttttattaattacataatttattgaaataaaaaaagaatttttgacactgtcttcaatactaaacccttccatgcaagggtttccttaatcgttaag |
35690754 |
T |
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| Q |
218 |
tagaacaaaatagaaatagaaacaacaaaaatgtaaaaagtgtgaatgcaatgcagaagaaacttt |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35690755 |
tagaacaaaatagaaatagaaacaacaaaaatgtaaaaagtgtgaatgcaatgcagaagaaacttt |
35690820 |
T |
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