View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2568_low_44 (Length: 271)
Name: NF2568_low_44
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2568_low_44 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 43864704 - 43864945
Alignment:
| Q |
14 |
aggtgcatctttttggtccaccgaataccgactgtgggagtggttaggagaagaagccatcaaccggatgacaggttctagaagtaactaaaaaagtgtc |
113 |
Q |
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| T |
43864704 |
aggtgcatctttttggtccaccgaataccgactgtgggagtggttaggagaagaagccatcaaccggatgacaggttctagaagtaactaaaaaagtgtc |
43864803 |
T |
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| Q |
114 |
caaaaatagtaatttgcaattttgaaaccaaatttctgtccaaaacatggttagtattaaagggtggtgatatgatcatggagttttatttgatgtgttg |
213 |
Q |
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| T |
43864804 |
caaaaatagtaatttgcaattttgaaaccaaatttctgtccaaaacatggttagtattaaagggtggtgatatgatcatggtgttttatttgatgtgttg |
43864903 |
T |
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| Q |
214 |
tggaacacggtgttgcttacttaggtggatcgtggatccttc |
255 |
Q |
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| T |
43864904 |
tggaacacggtgttgcttacttaggtggatcgtggatccttc |
43864945 |
T |
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