View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2568_low_49 (Length: 252)
Name: NF2568_low_49
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2568_low_49 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 7 - 252
Target Start/End: Complemental strand, 1053891 - 1053641
Alignment:
| Q |
7 |
aacaaaatgaggaaggagtaatttgtttttctaacaacgtagcttcaattcaatagtcagctctatatatgtcaaaaaattgacgcacttgggaaggaaa |
106 |
Q |
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| T |
1053891 |
aacaatatgaggaaggagtaatttgtttttctaacaacgtagcttcaattcaatagtcagctctatatatgtcaaaaaattgacgcacttgggaaggaaa |
1053792 |
T |
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| Q |
107 |
acaatactcttgtat-----caaattaggtaaagaaaatgcacttgcgaaaggaaagttataatgttctagtatcaaattttcaacaagatacggaaata |
201 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1053791 |
acaatactcttgtaggtttccaaattaggtaaagaaaatgcacttgcgaaaggaaagttataatgttctagtatcaaattttcaacaagatacggaaata |
1053692 |
T |
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| Q |
202 |
tttcaaactaacaatattttcatattacgtatcaataaacaaacaaacatt |
252 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1053691 |
tttcaaactaacaatattttcatattacgtatcaataaacaaacaaacatt |
1053641 |
T |
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