View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2568_low_61 (Length: 239)
Name: NF2568_low_61
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2568_low_61 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 10582717 - 10582508
Alignment:
| Q |
18 |
attttgtgcttattcaagttagagtatatgcttccgatcaaagatggaatgtcatcaaggaaatatgaaaaataaagataaa-gcaaatcatcttccaca |
116 |
Q |
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| T |
10582717 |
attttgttcttattcaagttagagtatatgcttccgatcaaagatggactgtcatcaaggaaatatgaaaaataaagataaaagtaaatgatcttccaca |
10582618 |
T |
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| Q |
117 |
cctctaccttaggctgaatggcaaaatgatgatcaaagttcctcaactgcaacatttgatacaatcaaacaaaaacgtgcatctcgaacgaagcatatgc |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
10582617 |
cctctaccttaggctgaatggcaaaatgatgatcaaagttcctcaactgcaacatttgatacaatcaaacaaaaacgtgtatctcgaacgaagcatatgc |
10582518 |
T |
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| Q |
217 |
ctgatcaaca |
226 |
Q |
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| T |
10582517 |
ctgatcaaca |
10582508 |
T |
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