View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2568_low_62 (Length: 239)
Name: NF2568_low_62
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2568_low_62 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 25325943 - 25326181
Alignment:
| Q |
1 |
ctttggaaggtgaaggacctcctccaaatgtgcattactctgttgtaattgtgtcatctcgcacacactatatccagggtcggcccaagagtcaagccac |
100 |
Q |
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|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25325943 |
ctttggaaggtgaaggacctcctccaaatgtgcagtcctctgttgtaattgtgtcatctcgcacacactatatccagggtcggcccaagagtcaagccac |
25326042 |
T |
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| Q |
101 |
ctatgtaagggatttaggtctcggtattatacgacnnnnnnngaccttaaaataattcaatacagttgtaaatatattatatcataattaatcaaggatg |
200 |
Q |
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| T |
25326043 |
ctatgtaagggatttaggtctcggaattatgcgacaaaaaaagacctcaaaataattcaatatagttataaatatattatatcgcaattaatcaaggatg |
25326142 |
T |
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| Q |
201 |
tattttggaacnnnnnnntggcttaatagttcaattcat |
239 |
Q |
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||||||||||| ||||| ||||||||||||||| |
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| T |
25326143 |
tattttggaacaaaaaaatggctcaatagttcaattcat |
25326181 |
T |
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