View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2568_low_68 (Length: 236)
Name: NF2568_low_68
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2568_low_68 |
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Alignment Details
Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 234
Target Start/End: Original strand, 38712945 - 38713162
Alignment:
| Q |
7 |
attgaaaaaatacttttaaaattgttcaaaaaacttgattaattgaagaacatatatataggtgcatctgaatttaatcatttataagaaaataaagtaa |
106 |
Q |
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| T |
38712945 |
attgaaaaaatacttttaaaattgttcaaaaaacttcattaattgaagaacatatatataggtgaatctgaatttaatcatttataagagaataaagtaa |
38713044 |
T |
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| Q |
107 |
tccaaatccaacacaaaatgatcaaccagctgaaaggnnnnnnngaagtgctagaaattaaagaagactataactacatgaattaatttgcaaagaccct |
206 |
Q |
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| T |
38713045 |
tccaaatccaacacaaaatgatcaaccagctgaaaggaaaaaaagaa-tgtt--aagtt-------actacaactacatgaattaatttgcaaagaccct |
38713134 |
T |
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| Q |
207 |
ttaaaattttggagttgatgatgtccat |
234 |
Q |
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||||||||||||||||||| | |||||| |
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| T |
38713135 |
ttaaaattttggagttgataaggtccat |
38713162 |
T |
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