View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2568_low_75 (Length: 212)
Name: NF2568_low_75
Description: NF2568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2568_low_75 |
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Alignment Details
Target: chr5 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 16426710 - 16426885
Alignment:
| Q |
22 |
ggaaaagtccgtcaaagccgaaacggagccattaaaagagctcaatggacagtggagataattcaaaaactacaaactcatcaccacgtaataaggttga |
121 |
Q |
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| T |
16426710 |
ggaaaagtccgtcaaagccgaaacggagccattaaaagagctcaatggacagtggagataattcaaaaactacaaactcatcaccacgtaataaggttga |
16426809 |
T |
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| Q |
122 |
agagccacaatggaaaatatttaacggcaacagaaacaccgtatcccttaaccctaacaggaaaaagggtaatatt |
197 |
Q |
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|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16426810 |
agagccacaacggaaaatatttaacgtcaacagaaacaccgtatcccttaaccctaacaggaaaaagggtaatatt |
16426885 |
T |
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