View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2570_high_4 (Length: 281)
Name: NF2570_high_4
Description: NF2570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2570_high_4 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 8 - 281
Target Start/End: Complemental strand, 47036377 - 47036104
Alignment:
| Q |
8 |
tagcataggacatgtcccaaatagtttgagtaatatgaaagtagaagacttaatagatagtaatgagcaatggaatttatctctattaaataaatagcca |
107 |
Q |
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| T |
47036377 |
tagcaaaggacatgtcccaaatagtttgagtaatatgaaagtagaagacttaatagatagtaatgagcaatggaatttatctctattaaataaatagcca |
47036278 |
T |
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| Q |
108 |
cttgttagatgatatagtccttgacataaggagcctagtgcaatctgatatcaatttaagagctgatttgtgtgttaccctgggatattgtcgctaccac |
207 |
Q |
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| T |
47036277 |
cttgttagatgatatagtccttgacataaggagcctagtgcaatctgatatcaatttaggagctgatttgtgtgttaccctgggatattgtcgctaccac |
47036178 |
T |
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| Q |
208 |
ttacaagttacaagtccctttgcaggtttaataacatggaggctaatagcttttggtccaatgtttggagaatt |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036177 |
ttacaagttacaagtccctttgcaggtttaataacatggaggctaatagcttttggtccaatgtttggagaatt |
47036104 |
T |
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