View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2571_high_14 (Length: 217)
Name: NF2571_high_14
Description: NF2571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2571_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 3635134 - 3634933
Alignment:
| Q |
1 |
aatatcatagactaatttgagtattattttttgtcaggactaaattggactgcaagctaacaaattgtgtcttcactgcttattaaattgatactacaat |
100 |
Q |
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| T |
3635134 |
aatatcatagactaatttgagtattattttttgtcaggattaaattggactgcaagctaacaaattgtgtcttcactacttattaaattgatactacaat |
3635035 |
T |
|
| Q |
101 |
aatttgttgggtcatagactcctagtaacctatgaagcacaaacacaaatacggacccaacatgacacaaacatgtaaacgttgataataatttgagaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
3635034 |
aatttgttgggtcatagactcctagtaacctatgaagcacaaacacaaatacggacccgacatgacacaaacatgtaaacgttgataataatttgagaaa |
3634935 |
T |
|
| Q |
201 |
at |
202 |
Q |
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|| |
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| T |
3634934 |
at |
3634933 |
T |
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