View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2571_low_13 (Length: 243)
Name: NF2571_low_13
Description: NF2571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2571_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 42 - 226
Target Start/End: Original strand, 32179552 - 32179735
Alignment:
| Q |
42 |
tattattactttaaattttcaaggtaatttcaattactttaaactctacctaatgtcatttgcatctctctaatgtcattattttctattatgcatttat |
141 |
Q |
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| T |
32179552 |
tattattactttaaactttcaaggtaatt-caattactttaaactctacctaatgtcatttgcacctctctaatgttattattttctattatgcatttat |
32179650 |
T |
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| Q |
142 |
aataatgaaaaaacatcaatagtttgttataaataattgagcaaaatcaacgaggtaaacattgtgatatctttgtgcaaaaggt |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |
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| T |
32179651 |
aataatgaaaaaacatcaatagtttgttataaataattgagcaaaatcaatgaggtaaacattttgatatctttgtgcaaaaggt |
32179735 |
T |
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