View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2572_high_6 (Length: 287)
Name: NF2572_high_6
Description: NF2572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2572_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 53202333 - 53202602
Alignment:
| Q |
1 |
cgtggccgtgatcgcctgtattaagctctacggttttctctgtgctcgtaccttcaccggcgtttttgttgtcatgatatcaaccaccgtggtgggtctt |
100 |
Q |
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| T |
53202333 |
cgtggccgtgatcgcctgtattaagctctacggttttctctgtgctcgtaccttcaccggcgtttttgttgtcatgatatcaaccaccgtggtgggtctt |
53202432 |
T |
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| Q |
101 |
atcctaatggcaacgctgacgtgggatgtctctcgtaaagccacgtatgctttcaaccgccaccatcctccaccgttgatttgtaagggaggtatttgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53202433 |
atcctaatggcaacgctgacgtgggatgtctctcgtaaagccacgtatgctttcaaccgccaccatcctccaccgttgatttgtaagggaggtatttgtt |
53202532 |
T |
|
| Q |
201 |
ggcacggcgtcgccgtccgatcaccggcttctcaggtccgtttcagaattccacaacagatatttcccat |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53202533 |
ggcacggcgtcgccgtccgatcaccggcttctcaggtccgtttcagaattccacaacagatatttcccat |
53202602 |
T |
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